Carg01760 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01760
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Location	Carg_Chr04: 9447852 .. 9449370 (-)
RNA-Seq Expression	Carg01760
Synteny	Carg01760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAAAAAAAAAATAGACAAATTTTAAAATTTGAACAATAAATTTATAGTGACGTAATTTCTGAGGTGGCACCCACGTAGACCGGTGGGTGTATCCCAAAATTTGTGGGGGTGCGAAGAGAAGATGCGTTGATAAACCCTTGCTCGACGCCTTTGCTAAACCCGGTGAGAAGATAAAGATGGCATGGACTACAGTTCCAGCTTTCCATCTCCTCCCTCCTCTCTTTGCGCTTCATAAACCGACAGCTCCGCCGTGCTTCTTCTCCAATCCTTCAAGTGCTCTGCAACACACACGCCTCTCGCCCACTCTCAGGCTTCCATTTCAACCCTCCTCCTCCTCCTTCGGAAACCAGATTTGCAGGGCCGCCGAATACAAATTTCCCGACCCAATTCCTGAATTCGCCGTCGCTGTAAGCTCCCCTCCTTCTGGGCGTTCATGTAAATGGATGATTTCGAAATGTCTTGAAATAATTTCTTTTCTGTTCAGGAGACCGAGAAGTTCAGGGCTCATTTGCTTACCAAACTTTCTAAGAAAGATATTTACGGGGATTCGGTTCAAGAGGTCGTCGGAGTATGCACTGAGGTATGAACACTGCCATCCTCTGATTGAACATAATAGCTCAACAACTGCATGTCTTTACCTATGTTATGGCCTTCCAACTAAACAGATATTCAACACCTTTATGCATACTGAGTATGGCGGCCCTGGGACCTTGTTGGTTCTACCTTTCATTGACATGTCTGATACAATAAACGAACGAGGATTACCTGGAGGACCTCAGGCTGCCCGTGCTGCAGTCAAATGGGCTCAAGAGCATGTTGATAAAGACTGGAACCTGTGGACTGGTGACGATGGCACCTAACAAAAGCCCCTCTCAAGAATATATTTTGTTGAGATGGGCAGAGTTCTATTGTTATACCTGATTATCGAGTTCAGCTGGTTGCTTTCTTCTGGATCTTTATCAAAGGGATTGTTGATATATGAGCTGAATTTGTTTTTGTATGAACTATCAGAGATCTCAAGAATGACGAGGATAGAACTTAGATAAAGCAAACAGAATCCTTTAGCTGTCATGCTGGACAAAATTTGCATCAGTGTATTTCTATATGGCTTGAGCAATCTTAGAGATATAAAACATTTGATGTCTTTATGAACAATCTAAATTGTTTTAGCTGTACGGTAAGATGAGTGCTGTTACTTTAAGTGAATTGTGGATGTTGATGCTTCTTGTCTAAAACTGATCATTACAATACTCGCCATCAAACTAGTACTTACAGGTGAAGTTTTTTTTACCTAAACAGTTAGTTCTGAAGTACATTCATATCAGGTTCTTTAGTCCAAAAGGAGGGTAATGACTAAAATTTACAATTTCCATGTCCAAAAAAATGTAATAATGCACATACTTCCTTACCGATGGCGTTGATCGAGCAGTTCCTCCCTATCAATGAAACGCTCGAGAAGCTCTTCCTCTTGCAAAACCAAGCAGTCTTTGGCTTTTCCAAACAAGTCGTAGCGAT

mRNA sequence

ATTTTAAAAAAAAAATAGACAAATTTTAAAATTTGAACAATAAATTTATAGTGACGTAATTTCTGAGGTGGCACCCACGTAGACCGGTGGGTGTATCCCAAAATTTGTGGGGGTGCGAAGAGAAGATGCGTTGATAAACCCTTGCTCGACGCCTTTGCTAAACCCGGTGAGAAGATAAAGATGGCATGGACTACAGTTCCAGCTTTCCATCTCCTCCCTCCTCTCTTTGCGCTTCATAAACCGACAGCTCCGCCGTGCTTCTTCTCCAATCCTTCAAGTGCTCTGCAACACACACGCCTCTCGCCCACTCTCAGGCTTCCATTTCAACCCTCCTCCTCCTCCTTCGGAAACCAGATTTGCAGGGCCGCCGAATACAAATTTCCCGACCCAATTCCTGAATTCGCCGTCGCTGAGACCGAGAAGTTCAGGGCTCATTTGCTTACCAAACTTTCTAAGAAAGATATTTACGGGGATTCGGTTCAAGAGGTCGTCGGAGTATGCACTGAGATATTCAACACCTTTATGCATACTGAGTATGGCGGCCCTGGGACCTTGTTGGTTCTACCTTTCATTGACATGTCTGATACAATAAACGAACGAGGATTACCTGGAGGACCTCAGGCTGCCCGTGCTGCAGTCAAATGGGCTCAAGAGCATGTTGATAAAGACTGGAACCTGTGGACTGGTGACGATGGCACCTAACAAAAGCCCCTCTCAAGAATATATTTTGTTGAGATGGGCAGAGTTCTATTGTTATACCTGATTATCGAGTTCAGCTGGTTGCTTTCTTCTGGATCTTTATCAAAGGGATTGTTGATATATGAGCTGAATTTGTTTTTGTATGAACTATCAGAGATCTCAAGAATGACGAGGATAGAACTTAGATAAAGCAAACAGAATCCTTTAGCTGTCATGCTGGACAAAATTTGCATCAGTGTATTTCTATATGGCTTGAGCAATCTTAGAGATATAAAACATTTGATGTCTTTATGAACAATCTAAATTGTTTTAGCTGTACGGTAAGATGAGTGCTGTTACTTTAAGTGAATTGTGGATGTTGATGCTTCTTGTCTAAAACTGATCATTACAATACTCGCCATCAAACTAGTACTTACAGGTGAAGTTTTTTTTACCTAAACAGTTAGTTCTGAAGTACATTCATATCAGGTTCTTTAGTCCAAAAGGAGGGTAATGACTAAAATTTACAATTTCCATGTCCAAAAAAATGTAATAATGCACATACTTCCTTACCGATGGCGTTGATCGAGCAGTTCCTCCCTATCAATGAAACGCTCGAGAAGCTCTTCCTCTTGCAAAACCAAGCAGTCTTTGGCTTTTCCAAACAAGTCGTAGCGAT

Coding sequence (CDS)

ATGGCATGGACTACAGTTCCAGCTTTCCATCTCCTCCCTCCTCTCTTTGCGCTTCATAAACCGACAGCTCCGCCGTGCTTCTTCTCCAATCCTTCAAGTGCTCTGCAACACACACGCCTCTCGCCCACTCTCAGGCTTCCATTTCAACCCTCCTCCTCCTCCTTCGGAAACCAGATTTGCAGGGCCGCCGAATACAAATTTCCCGACCCAATTCCTGAATTCGCCGTCGCTGAGACCGAGAAGTTCAGGGCTCATTTGCTTACCAAACTTTCTAAGAAAGATATTTACGGGGATTCGGTTCAAGAGGTCGTCGGAGTATGCACTGAGATATTCAACACCTTTATGCATACTGAGTATGGCGGCCCTGGGACCTTGTTGGTTCTACCTTTCATTGACATGTCTGATACAATAAACGAACGAGGATTACCTGGAGGACCTCAGGCTGCCCGTGCTGCAGTCAAATGGGCTCAAGAGCATGTTGATAAAGACTGGAACCTGTGGACTGGTGACGATGGCACCTAA

Protein sequence

MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQICRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT

Homology

[Close]

BLAST of Carg01760 vs. NCBI nr
Match: XP_022956596.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita moschata] >XP_022956597.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita moschata] >KAG7032158.1 Protein PLASTID REDOX INSENSITIVE 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.9 bits (943), Expect = 5.0e-98
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60
           MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC
Sbjct: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60

Query: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120
           RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG
Sbjct: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120

Query: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT
Sbjct: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 173

[Close]

BLAST of Carg01760 vs. NCBI nr
Match: KAG6601374.1 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.9 bits (943), Expect = 5.0e-98
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60
           MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC
Sbjct: 114 MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 173

Query: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120
           RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG
Sbjct: 174 RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 233

Query: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT
Sbjct: 234 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 286

[Close]

BLAST of Carg01760 vs. NCBI nr
Match: XP_022997795.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima] >XP_022997873.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 361.3 bits (926), Expect = 4.6e-96
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60
           MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQP SSSFGNQIC
Sbjct: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQP-SSSFGNQIC 60

Query: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120
           RAAEYKFPDPIPEFA+AETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG
Sbjct: 61  RAAEYKFPDPIPEFAIAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120

Query: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT
Sbjct: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 172

[Close]

BLAST of Carg01760 vs. NCBI nr
Match: KAG6601379.1 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360.1 bits (923), Expect = 1.0e-95
Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQP-SSSSFGNQI 60
           MAWTTVPAFHLLP LFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQP SSSSFGNQI
Sbjct: 104 MAWTTVPAFHLLPSLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSSFGNQI 163

Query: 61  CRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEY 120
           CRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEY
Sbjct: 164 CRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEY 223

Query: 121 GGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT
Sbjct: 224 GGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 277

[Close]

BLAST of Carg01760 vs. NCBI nr
Match: XP_023549642.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023549649.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023549656.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023549666.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 3.0e-95
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60
           MAWTTVPAFHLLPPLFALHKP +PPCFFSNPSSALQHTRLSPTLRLPFQP SSSFGNQIC
Sbjct: 1   MAWTTVPAFHLLPPLFALHKPNSPPCFFSNPSSALQHTRLSPTLRLPFQP-SSSFGNQIC 60

Query: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120
           RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG
Sbjct: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120

Query: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT
Sbjct: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 172

[Close]

BLAST of Carg01760 vs. ExPASy Swiss-Prot
Match: Q9XIK0 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRIN2 PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.5e-52
Identity = 99/154 (64.29%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 18  LHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQICRAAEYKFPDPIPEFAVA 77
           +  P A  C   +     Q  R   T    F  SS S    +CRAAEYKFPDPIPEFA A
Sbjct: 29  ISSPAAVSCAIKSTQFFKQRCR---TKVRDFSLSSLSRRGFVCRAAEYKFPDPIPEFAEA 88

Query: 78  ETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYGGPGTLLVLPFIDMSDTI 137
           ETEKFR H+L KLSK+D++ DSV E+VGVCTEIF TF+ +EYGGPGTLLV+PFIDM+DT+
Sbjct: 89  ETEKFRDHMLNKLSKRDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFIDMADTL 148

Query: 138 NERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDD 172
           NER LPGGPQAARAA+KWAQ+HVDKDW  WTG D
Sbjct: 149 NERELPGGPQAARAAIKWAQDHVDKDWKEWTGTD 179

[Close]

BLAST of Carg01760 vs. ExPASy Swiss-Prot
Match: B6UFC7 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 77/158 (48.73%), Postives = 101/158 (63.92%), Query Frame = 0


Query: 21  PTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQICRAA------EYKFPDPIPEF 80
           P   P    +P+ ++   + S ++ L  +      G  +CR A      +YKFPDPIPEF
Sbjct: 15  PQLLPLRSCSPTKSVSPAQRSASMGLRLRSGRPCLGKFVCRRAKNAGYEDYKFPDPIPEF 74

Query: 81  AVAETEKFRAHLLTKL--SKKDIYGDSVQEVVGVCTEIFNTFMHTEYGGPGTLLVLPFID 140
           A  ET KFR H+  +L   K+D +GD V+E+V VCTEI  TF+  +Y GPGTLLV PF+D
Sbjct: 75  AEQETSKFREHMAWRLEQKKEDYFGDHVEEIVDVCTEIMGTFLENDYRGPGTLLVHPFLD 134

Query: 141 MSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGD 171
           M   I ERGLPG PQAARAA+ WA+++VDKDW  WTG+
Sbjct: 135 MKGEIKERGLPGAPQAARAAIAWAEKNVDKDWKAWTGE 172

[Close]

BLAST of Carg01760 vs. ExPASy Swiss-Prot
Match: Q6H612 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-37
Identity = 74/155 (47.74%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 24  PPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQICRAA------EYKFPDPIPEFAVA 83
           PP    + SS+   +RL  ++    +  +    + +CR A      +YKFPDPIPEFA  
Sbjct: 17  PPLLTLSASSSPSSSRLRRSVLGRLRSRAPRPADFVCRRAKNAAYDDYKFPDPIPEFAAQ 76

Query: 84  ETEKFRAHLLTKLSKK--DIYGDSVQEVVGVCTEIFNTFMHTEYGGPGTLLVLPFIDMSD 143
           ET KF+ H++ +L +K  D +G+ V+E+V VCTEI  TF+  +Y GPGTLLV PF+DM  
Sbjct: 77  ETSKFKEHMMWRLEQKKDDYFGEHVEEIVDVCTEILGTFLEHDYCGPGTLLVHPFLDMKG 136

Query: 144 TINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGD 171
            I ERGLPG PQAARAA+ WA++++DKDW  WTG+
Sbjct: 137 EIKERGLPGAPQAARAAIAWAEKNIDKDWKAWTGE 171

[Close]

BLAST of Carg01760 vs. ExPASy TrEMBL
Match: A0A6J1GWZ9 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458286 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.4e-98
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60
           MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC
Sbjct: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60

Query: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120
           RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG
Sbjct: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120

Query: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT
Sbjct: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 173

[Close]

BLAST of Carg01760 vs. ExPASy TrEMBL
Match: A0A6J1KAW7 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111492617 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.2e-96
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQIC 60
           MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQP SSSFGNQIC
Sbjct: 1   MAWTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQP-SSSFGNQIC 60

Query: 61  RAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120
           RAAEYKFPDPIPEFA+AETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG
Sbjct: 61  RAAEYKFPDPIPEFAIAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYG 120

Query: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT
Sbjct: 121 GPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 172

[Close]

BLAST of Carg01760 vs. ExPASy TrEMBL
Match: A0A1S3BEL5 (uncharacterized protein LOC103489037 OS=Cucumis melo OX=3656 GN=LOC103489037 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74
Identity = 143/174 (82.18%), Postives = 151/174 (86.78%), Query Frame = 0


Query: 1   MAWTTVPAFHLLPPL-FALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQI 60
           MAWTT P+F+LLPPL F+ HKP+ P  FFSN  SA    RLSPTL LP   SSSSF   I
Sbjct: 1   MAWTTSPSFNLLPPLFFSFHKPSLPLSFFSNNPSA--PPRLSPTLTLP--SSSSSFPTHI 60

Query: 61  CRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEY 120
           C AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYGDS+Q+VVG+CTEIFNTFMHTEY
Sbjct: 61  CTAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSLQQVVGICTEIFNTFMHTEY 120

Query: 121 GGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD T
Sbjct: 121 GGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 170

[Close]

BLAST of Carg01760 vs. ExPASy TrEMBL
Match: A0A0A0KTS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603340 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.6e-72
Identity = 141/176 (80.11%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   MAWTTV-PAFHLLPPL-FALHKPTAPPCFFS-NPSSALQHTRLSPTLRLPFQPSSSSFGN 60
           MAWTT  P+F+LLP L F  HKP+ PP FFS NPS+ L   RLSPTL LP    SSSF  
Sbjct: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPL---RLSPTLTLP----SSSFPT 60

Query: 61  QICRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHT 120
            IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSK+DIYGDS+Q+VVG+CTEIFNTFMHT
Sbjct: 61  HICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKRDIYGDSLQQVVGICTEIFNTFMHT 120

Query: 121 EYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           EYGGPGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD T
Sbjct: 121 EYGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 169

[Close]

BLAST of Carg01760 vs. ExPASy TrEMBL
Match: A0A6J1DCY7 (protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC111019216 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.5e-71
Identity = 133/171 (77.78%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 3   WTTVPAFHLLPPLFALHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQICRA 62
           WT  P  HL P L  L     P  FF NPS+ L  TRLSPTL LP+       G +ICRA
Sbjct: 5   WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLP----GERICRA 64

Query: 63  AEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYGGP 122
           AEYKFPDPIPEFAVAETEKFRAHLL KLSKKD+YGDSV EVVG+CTEIFNTFMHTEYGGP
Sbjct: 65  AEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDMYGDSVPEVVGICTEIFNTFMHTEYGGP 124

Query: 123 GTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 174
           GTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Sbjct: 125 GTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT 171

[Close]

BLAST of Carg01760 vs. TAIR 10
Match: AT1G10522.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-53
Identity = 99/154 (64.29%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 18  LHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQICRAAEYKFPDPIPEFAVA 77
           +  P A  C   +     Q  R   T    F  SS S    +CRAAEYKFPDPIPEFA A
Sbjct: 29  ISSPAAVSCAIKSTQFFKQRCR---TKVRDFSLSSLSRRGFVCRAAEYKFPDPIPEFAEA 88

Query: 78  ETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYGGPGTLLVLPFIDMSDTI 137
           ETEKFR H+L KLSK+D++ DSV E+VGVCTEIF TF+ +EYGGPGTLLV+PFIDM+DT+
Sbjct: 89  ETEKFRDHMLNKLSKRDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFIDMADTL 148

Query: 138 NERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDD 172
           NER LPGGPQAARAA+KWAQ+HVDKDW  WTG D
Sbjct: 149 NERELPGGPQAARAAIKWAQDHVDKDWKEWTGTD 179

[Close]

BLAST of Carg01760 vs. TAIR 10
Match: AT1G10522.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-53
Identity = 99/154 (64.29%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 18  LHKPTAPPCFFSNPSSALQHTRLSPTLRLPFQPSSSSFGNQICRAAEYKFPDPIPEFAVA 77
           +  P A  C   +     Q  R   T    F  SS S    +CRAAEYKFPDPIPEFA A
Sbjct: 29  ISSPAAVSCAIKSTQFFKQRCR---TKVRDFSLSSLSRRGFVCRAAEYKFPDPIPEFAEA 88

Query: 78  ETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTEYGGPGTLLVLPFIDMSDTI 137
           ETEKFR H+L KLSK+D++ DSV E+VGVCTEIF TF+ +EYGGPGTLLV+PFIDM+DT+
Sbjct: 89  ETEKFRDHMLNKLSKRDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFIDMADTL 148

Query: 138 NERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDD 172
           NER LPGGPQAARAA+KWAQ+HVDKDW  WTG D
Sbjct: 149 NERELPGGPQAARAAIKWAQDHVDKDWKEWTGTD 179

The following BLAST results are available for this feature:

BLAST of Carg01760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956596.1	5.0e-98	100.00	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita moschata] >XP...	[more]
KAG6601374.1	5.0e-98	100.00	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrospe...	[more]
XP_022997795.1	4.6e-96	98.84	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima] >XP_0...	[more]
KAG6601379.1	1.0e-95	98.85	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrospe...	[more]
XP_023549642.1	3.0e-95	98.27	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. p...	[more]

BLAST of Carg01760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIK0	2.5e-52	64.29	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B6UFC7	1.2e-38	48.73	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 ...	[more]
Q6H612	5.1e-37	47.74	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japoni...	[more]

BLAST of Carg01760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWZ9	2.4e-98	100.00	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita moschata OX...	[more]
A0A6J1KAW7	2.2e-96	98.84	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita maxima OX=3...	[more]
A0A1S3BEL5	2.4e-74	82.18	uncharacterized protein LOC103489037 OS=Cucumis melo OX=3656 GN=LOC103489037 PE=...	[more]
A0A0A0KTS5	8.6e-72	80.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603340 PE=4 SV=1	[more]
A0A6J1DCY7	9.5e-71	77.78	protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Carg01760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10522.1	1.8e-53	64.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10522.2	1.8e-53	64.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039349	Protein PLASTID REDOX INSENSITIVE 2	PANTHER	PTHR35987	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC-RELATED	coord: 43..171
None	No IPR available	PANTHER	PTHR35987:SF2	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC	coord: 43..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01760-RA	Carg01760-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression