Carg01616 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01616
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLow affinity potassium transport system protein kup isoform 1
LocationCarg_Chr15: 2954432 .. 2957388 (+)
RNA-Seq ExpressionCarg01616
SyntenyCarg01616
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCGTCAGAGCCGCCGATTCACTTCCGAAACGCTGCCGATTTTTATCTCTACTGCTATTCTCTGTCACACGTAGTCCGAATCTGCAGTCAGGTACAGCCACAATTCTCTTCCTCTCCGTTCGATCTCATTTTTGTGTACACGAGGAATCGAATCGAATCGAATCGAATAGATCGTTCTTCGAATTTGTGTTCGTTTCGGAGAATGTGAATCCTCATTTTGCTAGAATTTGTTTGATAATTGATAGTTGTTTTCTCAAGTGGAAGTTATTTTCAGATTTCTGAAATGGTTGTATTGTTCTTGTTCAAGCTTTTTTTCGATACGAGTTGTCTGCATTTCAGAGTTCGTGAACCGAGCGCTATGGCCAGTGAGATGTTCGATTTGATTATTGATTTTTGTTCAATTTTTGCGCAGGAGATTGTAGATTTGAATTCATCGGAGTTTTTGAACGCGTTTGAGCGTTTCAGAACAAAAGCAGAAAGTTATATCTTATCGAGTTTCGTGAAGATTAGAATAACGGCGGAAGATTCTTTCCATGTGGTCCGGTAGCTCTTTATTTCCCCTTCCACAAATTAATTTTATCTATTCCAATTATTTATTAGTTCGTCTGTTATTTTCTTGTTTTTCCCCTTCGTATCTGCAATGAATATGTTCCGTTTTTTGTTTCAATAATGTTGATAATTTGTAAATTATCTCTACCGCGTGAAATCGCCGCTGGATCCAAAAGCTTAGCTGAGCCAAGTAATCTAGCAGTTCATAGATTTCAATTGTATAGAATGTTGAAATTTCCGTGCCGTAGCCTCCAGTTTTCAATTTCGGATAACTTGTAGGAGAGGAAGAAAATTTTCTGCATTAGAAACGCGTAAGAATGTTATTATCATATCATGATCTTATCTGTTGCTGTTTTCATTCCTCGATTCTGACATAGAATTTCTATGCATTGAATGCACATCCTGGCTTTCATCTCTTCATTCTTTTTGGCACATTATTCAGCGATAACTTTAAGTAATTTGTGACTGATAAGGGCATGACGATGGTGAATCATTTTCATTTTAAGTTCAAACTCCCTAGGATTTTGTTGTTTGTGTTCCCCCACGACCACCGATTTAAGCTTTGAGTATGCATTTGAATGCCTTGTGAATCTAGAACCATTTTAACGTTGTTCTAAACAACAGCCAACCGGTACAGATTATTAGAAAGAAATTTTAACATCAGAGGTGGATCATACGAGCTGGGGAACACTTTCGATGGTGATAGGTACGATGGCCAATTTGATTCTGAGTTATAGATGGATGAATGAGAGGGTGTGTTCATAATATTCTTAGAGATTTTTGTCAAAATTCTTTTTGGGTTCCCAGATGAGCTCAACCAATGTTCTTGGCAGTAGAAGGGGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCCTGACCCTTCTTCTTTTGGGTCAGAAGAGCGAAGATAATCCCATGAGAGTTTTGCCGTTCTTGGTGGACCGAGAGCCTGACCTCAACAACCAGCTGGCTTCAAGAAAGACGTGGATTTCCTGGAGGTGCGCCTCCCCCTCCCTTCGCTGCTTCCGGTGGAACCCTGCAGGGCCGATTCCATCTCCTTTGAAGAAAGCAGCCTCTACACAGCGCCAAGACAGTTCAAGAACATCTCCTCTTTCTGATAATGGCAAGGATCATGTTCCTAGCTCAGATGACGATAATCTTGCAAGAAAAATGGTGCTTAAAAGTAGCTTGAAAAAGGCATCGGATGCTCCTGCAGTTTCTGTACAGAATGCTGGTGGAAATGAAGCATTGGGAGAAAAGGGTAGTTATGATTCTAGTCATGTAGAAAGAAGGAAAGTACAGTGGACAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGGTATGAAAACTTCAAAAGCATATCTTTTGTTTTGAAGCTTGCATATAGGTTCATGTTCCATGTGTTCTTCAATGTTCATCACATCATCCCTTTTCAACAATGGAAAATTTCAAATCTTCATTGACATTAATGTGCATTTAGTCACGAAGTACAAGTCTTGATGATACACTTAGCCTAATAAATGACTAAAACATAACCCTGTTGCTTAGATTTTACTGATGAGAATTGGCATTACATCCTATCTAAAGTTTGTTCATCCCCAAATGCAGTGAAATAAATGCATCTGACGATGAAAATGATATTGGGAAAGCAAGGTGTTTGTGCACTATCATGTAATTCATTCAAAGCCCATATTTACCATAGATGACGTTTGCACAAGATTCTCAAAGATCTGCTGACTTGAATCGAATCAAACTTGTTTGCTCGAGAATTTTCCAAGACAGAGGAAGCTGTCTAGACAAGCAGGAACCATCCAGGAAGTCTTCATGGTGATATCTTATCCGTGGTAGTGCTGATTTCAGTAAGTTTTTCTTTTCTAATTTTGTTTTCACATGGATGGCCTCCACTTTTAAGCACTTTTTGTTGCTTTTTCACTGTATTGTTCCTTAGTTCTTTGTCTCTATTACTCTGTTCATTTCGTGGTTTTTTTCTCCCTGTATGAACAATTTTTTGGGGTATTTCATTACTATTGAGTATTTAGAAGGAAGCTTTTGATTAGATTAAGGGTTTTTGTTGATTGATATTAAGATAAAATTAATGATGTGCAGTGACTATTGCCATATGATAAAATTAAGGGCTCTGTTTCAATGCTCTCGTGTGGTTTATCTTAGATTCAAATTTGTTCCATTTCTCATTTTTTTAGCTCTATAATTACGGGATTGAAAAATGAATTAGAGACTTTTGTCGTTCTAATTAACGAGCTAATGCTCTATCTATAGAAAGATTTACAGGATTAACAGTGAAAGTCTGTTCATTATCACTCGAATTTTTCTGTTTAAGTATAAGTAGAAATAGTTAAATTATAGAAAATGTCTTCAAATTAT

mRNA sequence

ACCGTCAGAGCCGCCGATTCACTTCCGAAACGCTGCCGATTTTTATCTCTACTGCTATTCTCTGTCACACGTAGTCCGAATCTGCAGTCAGGTACAGCCACAATTCTCTTCCTCTCCGTTCGATCTCATTTTTGTGTACACGAGGAATCGAATCGAATCGAATCGAATAGATCGTTCTTCGAATTTGTGTTCGTTTCGGAGAATGTGAATCCTCATTTTGCTAGAATTTGTTTGATAATTGATAGTTGTTTTCTCAAGTGGAAGTTATTTTCAGATTTCTGAAATGGTTGTATTGTTCTTTTCGTGAACCGAGCGCTATGGCCAGTGAGATGTTCGATTTGATTATTGATTTTTGTTCAATTTTTGCGCAGGAGATTGTAGATTTGAATTCATCGGAGTTTTTGAACGCGTTTGAGCGTTTCAGAACAAAAGCAGAAAGTTATATCTTATCGAGTTTCGTGAAGATTAGAATAACGGCGGAAGATTCTTTCCATGTGGTCCGCCAACCGGTACAGATTATTAGAAAGAAATTTTAACATCAGAGGTGGATCATACGAGCTGGGGAACACTTTCGATGGTGATAGATGAGCTCAACCAATGTTCTTGGCAGTAGAAGGGGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCCTGACCCTTCTTCTTTTGGGTCAGAAGAGCGAAGATAATCCCATGAGAGTTTTGCCGTTCTTGGTGGACCGAGAGCCTGACCTCAACAACCAGCTGGCTTCAAGAAAGACGTGGATTTCCTGGAGGTGCGCCTCCCCCTCCCTTCGCTGCTTCCGGTGGAACCCTGCAGGGCCGATTCCATCTCCTTTGAAGAAAGCAGCCTCTACACAGCGCCAAGACAGTTCAAGAACATCTCCTCTTTCTGATAATGGCAAGGATCATGTTCCTAGCTCAGATGACGATAATCTTGCAAGAAAAATGGTGCTTAAAAGTAGCTTGAAAAAGGCATCGGATGCTCCTGCAGTTTCTGTACAGAATGCTGGTGGAAATGAAGCATTGGGAGAAAAGGGTAGTTATGATTCTAGTCATGTAGAAAGAAGGAAAGTACAGTGGACAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTGAAATAAATGCATCTGACGATGAAAATGATATTGGGAAAGCAAGGTGTTTGTGCACTATCATGTAATTCATTCAAAGCCCATATTTACCATAGATGACGTTTGCACAAGATTCTCAAAGATCTGCTGACTTGAATCGAATCAAACTTGTTTGCTCGAGAATTTTCCAAGACAGAGGAAGCTGTCTAGACAAGCAGGAACCATCCAGGAAGTCTTCATGGTGATATCTTATCCGTGGTAGTGCTGATTTCAGTAAGTTTTTCTTTTCTAATTTTGTTTTCACATGGATGGCCTCCACTTTTAAGCACTTTTTGTTGCTTTTTCACTGTATTGTTCCTTAGTTCTTTGTCTCTATTACTCTGTTCATTTCGTGGTTTTTTTCTCCCTGTATGAACAATTTTTTGGGGTATTTCATTACTATTGAGTATTTAGAAGGAAGCTTTTGATTAGATTAAGGGTTTTTGTTGATTGATATTAAGATAAAATTAATGATGTGCAGTGACTATTGCCATATGATAAAATTAAGGGCTCTGTTTCAATGCTCTCGTGTGGTTTATCTTAGATTCAAATTTGTTCCATTTCTCATTTTTTTAGCTCTATAATTACGGGATTGAAAAATGAATTAGAGACTTTTGTCGTTCTAATTAACGAGCTAATGCTCTATCTATAGAAAGATTTACAGGATTAACAGTGAAAGTCTGTTCATTATCACTCGAATTTTTCTGTTTAAGTATAAGTAGAAATAGTTAAATTATAGAAAATGTCTTCAAATTAT

Coding sequence (CDS)

ATGTTCTTGGCAGTAGAAGGGGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCCTGACCCTTCTTCTTTTGGGTCAGAAGAGCGAAGATAATCCCATGAGAGTTTTGCCGTTCTTGGTGGACCGAGAGCCTGACCTCAACAACCAGCTGGCTTCAAGAAAGACGTGGATTTCCTGGAGGTGCGCCTCCCCCTCCCTTCGCTGCTTCCGGTGGAACCCTGCAGGGCCGATTCCATCTCCTTTGAAGAAAGCAGCCTCTACACAGCGCCAAGACAGTTCAAGAACATCTCCTCTTTCTGATAATGGCAAGGATCATGTTCCTAGCTCAGATGACGATAATCTTGCAAGAAAAATGGTGCTTAAAAGTAGCTTGAAAAAGGCATCGGATGCTCCTGCAGTTTCTGTACAGAATGCTGGTGGAAATGAAGCATTGGGAGAAAAGGGTAGTTATGATTCTAGTCATGTAGAAAGAAGGAAAGTACAGTGGACAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTGAAATAAATGCATCTGACGATGAAAATGATATTGGGAAAGCAAGGTGTTTGTGCACTATCATGTAA

Protein sequence

MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKARCLCTIM
Homology
[Close]
BLAST of Carg01616 vs. NCBI nr
Match: KAG7016404.1 (hypothetical protein SDJN02_21513 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60
           MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI
Sbjct: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60

Query: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120
           SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK
Sbjct: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120

Query: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180
           MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE
Sbjct: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180

Query: 181 PSEINASDDENDIGKARCLCTIM 204
           PSEINASDDENDIGKARCLCTIM
Sbjct: 181 PSEINASDDENDIGKARCLCTIM 203

[Close]
BLAST of Carg01616 vs. NCBI nr
Match: XP_023551469.1 (uncharacterized protein LOC111809268 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551470.1 uncharacterized protein LOC111809268 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551471.1 uncharacterized protein LOC111809268 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551472.1 uncharacterized protein LOC111809268 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551473.1 uncharacterized protein LOC111809268 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60
           MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI
Sbjct: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60

Query: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120
           SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK
Sbjct: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120

Query: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180
           MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE
Sbjct: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180

Query: 181 PSEINASDDENDIGKARCLCTIM 204
           PSEINASDDENDIGK RCLC IM
Sbjct: 181 PSEINASDDENDIGKTRCLCNIM 203

[Close]
BLAST of Carg01616 vs. NCBI nr
Match: XP_022939839.1 (uncharacterized protein LOC111445595 isoform X1 [Cucurbita moschata] >XP_022939840.1 uncharacterized protein LOC111445595 isoform X1 [Cucurbita moschata] >XP_022939841.1 uncharacterized protein LOC111445595 isoform X1 [Cucurbita moschata] >XP_022939842.1 uncharacterized protein LOC111445595 isoform X1 [Cucurbita moschata])

HSP 1 Score: 397.1 bits (1019), Expect = 9.0e-107
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60
           MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI
Sbjct: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60

Query: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120
           SWRCASPSLRCF WNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKD VPSSDDDNLARK
Sbjct: 61  SWRCASPSLRCFWWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDRVPSSDDDNLARK 120

Query: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180
           MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE
Sbjct: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180

Query: 181 PSEINASDDENDIGKARCLCTIM 204
           PSEINASDDENDIGKARCLCTIM
Sbjct: 181 PSEINASDDENDIGKARCLCTIM 203

[Close]
BLAST of Carg01616 vs. NCBI nr
Match: XP_022993299.1 (uncharacterized protein LOC111489351 isoform X1 [Cucurbita maxima] >XP_022993300.1 uncharacterized protein LOC111489351 isoform X1 [Cucurbita maxima] >XP_022993301.1 uncharacterized protein LOC111489351 isoform X1 [Cucurbita maxima] >XP_022993302.1 uncharacterized protein LOC111489351 isoform X1 [Cucurbita maxima])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60
           MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI
Sbjct: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60

Query: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120
           SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSS+DD LARK
Sbjct: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSNDDYLARK 120

Query: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180
           MVLKSSLKKASD PAVSVQNA GNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE
Sbjct: 121 MVLKSSLKKASDVPAVSVQNADGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180

Query: 181 PSEINASDDENDIGKARCLCTIM 204
           PSEINASDDENDIGK RCLCTIM
Sbjct: 181 PSEINASDDENDIGKTRCLCTIM 203

[Close]
BLAST of Carg01616 vs. NCBI nr
Match: XP_023551474.1 (uncharacterized protein LOC111809268 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551475.1 uncharacterized protein LOC111809268 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551476.1 uncharacterized protein LOC111809268 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.5 bits (859), Expect = 3.2e-88
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0 

Query: 36  MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDS 95
           MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDS
Sbjct: 1   MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDS 60

Query: 96  SRTSPLSDNGKDHVPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDS 155
           SRTSPLSDNGKDHVPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDS
Sbjct: 61  SRTSPLSDNGKDHVPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDS 120

Query: 156 SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKARCLCTIM 204
           SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGK RCLC IM
Sbjct: 121 SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKTRCLCNIM 168

[Close]
BLAST of Carg01616 vs. ExPASy TrEMBL
Match: A0A6J1FIB8 (uncharacterized protein LOC111445595 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445595 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60
           MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI
Sbjct: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60

Query: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120
           SWRCASPSLRCF WNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKD VPSSDDDNLARK
Sbjct: 61  SWRCASPSLRCFWWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDRVPSSDDDNLARK 120

Query: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180
           MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE
Sbjct: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180

Query: 181 PSEINASDDENDIGKARCLCTIM 204
           PSEINASDDENDIGKARCLCTIM
Sbjct: 181 PSEINASDDENDIGKARCLCTIM 203

[Close]
BLAST of Carg01616 vs. ExPASy TrEMBL
Match: A0A6J1JSF2 (uncharacterized protein LOC111489351 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489351 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60
           MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI
Sbjct: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60

Query: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDDNLARK 120
           SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSS+DD LARK
Sbjct: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSNDDYLARK 120

Query: 121 MVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180
           MVLKSSLKKASD PAVSVQNA GNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE
Sbjct: 121 MVLKSSLKKASDVPAVSVQNADGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEFE 180

Query: 181 PSEINASDDENDIGKARCLCTIM 204
           PSEINASDDENDIGK RCLCTIM
Sbjct: 181 PSEINASDDENDIGKTRCLCTIM 203

[Close]
BLAST of Carg01616 vs. ExPASy TrEMBL
Match: A0A6J1FHY9 (uncharacterized protein LOC111445595 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445595 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0 

Query: 36  MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDS 95
           MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCF WNPAGPIPSPLKKAASTQRQDS
Sbjct: 1   MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFWWNPAGPIPSPLKKAASTQRQDS 60

Query: 96  SRTSPLSDNGKDHVPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDS 155
           SRTSPLSDNGKD VPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDS
Sbjct: 61  SRTSPLSDNGKDRVPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDS 120

Query: 156 SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKARCLCTIM 204
           SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKARCLCTIM
Sbjct: 121 SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKARCLCTIM 168

[Close]
BLAST of Carg01616 vs. ExPASy TrEMBL
Match: A0A6J1BV87 (uncharacterized protein LOC111006056 OS=Momordica charantia OX=3673 GN=LOC111006056 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87
Identity = 176/204 (86.27%), Postives = 179/204 (87.75%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPFLVDREPDLNNQLASRKTWI 60
           M LAVEGGGFFSSS SG SSSLTLLLLGQKSED PMRVLP LVDREPDLN QLAS KTWI
Sbjct: 1   MLLAVEGGGFFSSSVSGCSSSLTLLLLGQKSEDKPMRVLPLLVDREPDLNIQLASTKTWI 60

Query: 61  SWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGK-DHVPSSDDDNLAR 120
           SWRCASPS RCFR NPA    SPLKKAA+TQRQDS R SP SDNGK +HVPSSDDDNLAR
Sbjct: 61  SWRCASPSFRCFRQNPAVTNSSPLKKAATTQRQDSLRASPRSDNGKNNHVPSSDDDNLAR 120

Query: 121 KMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSELAEVKEF 180
           KMVLKSSLKKASDAP VSV NA GNEALG KGS D SHVERRKVQWTDTCGSELAEVKEF
Sbjct: 121 KMVLKSSLKKASDAPIVSVPNADGNEALGGKGSCDPSHVERRKVQWTDTCGSELAEVKEF 180

Query: 181 EPSEINASDDENDIGKARCLCTIM 204
           EPSEINASDDE+DIGK RCLC IM
Sbjct: 181 EPSEINASDDEHDIGKRRCLCAIM 204

[Close]
BLAST of Carg01616 vs. ExPASy TrEMBL
Match: A0A6J1JSF6 (uncharacterized protein LOC111489351 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489351 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.5e-86
Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 36  MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDS 95
           MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDS
Sbjct: 1   MRVLPFLVDREPDLNNQLASRKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDS 60

Query: 96  SRTSPLSDNGKDHVPSSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDS 155
           SRTSPLSDNGKDHVPSS+DD LARKMVLKSSLKKASD PAVSVQNA GNEALGEKGSYDS
Sbjct: 61  SRTSPLSDNGKDHVPSSNDDYLARKMVLKSSLKKASDVPAVSVQNADGNEALGEKGSYDS 120

Query: 156 SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKARCLCTIM 204
           SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGK RCLCTIM
Sbjct: 121 SHVERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKTRCLCTIM 168

[Close]
BLAST of Carg01616 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 100/218 (45.87%), Postives = 133/218 (61.01%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPF----LVDREPDLNN--QLA 60
           M LAVEGGG FS+SASGYS  LTLL  G K  D PMRV+P+    +VD+EP+ +   QL 
Sbjct: 1   MLLAVEGGGLFSASASGYSKGLTLLFSGDKDVDRPMRVVPWNHYQVVDQEPEADPVLQLD 60

Query: 61  SRKTWISWRCASPSLRCFRWNPAG-PIPSPLKKAASTQRQDSSRTSP-----LSDNGKDH 120
           S K  +S  CA+ S  CF    AG   PSPL K    Q+Q    +SP     +S+ GKD 
Sbjct: 61  SIKNRVSRGCAA-SFSCFGGASAGLETPSPL-KVEPVQQQHREISSPESVVVVSEKGKDQ 120

Query: 121 VPSSDDDNL--ARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWT 180
           +  +D+ +   A K+ L+SSLK+ S A + S+++    E L   GS  +  + RRKVQW 
Sbjct: 121 ISEADNGSSKEAFKLSLRSSLKRPSVAESRSLEDIKEYETLSVDGSDLTGDMARRKVQWP 180

Query: 181 DTCGSELAEVKEFEPSEINASDDENDIGKAR-CLCTIM 204
           D CGSEL +V+EFEPSE+  SD+E ++G+ R C C IM
Sbjct: 181 DACGSELTQVREFEPSEMGLSDEEWEVGRQRTCSCVIM 216

[Close]
BLAST of Carg01616 vs. TAIR 10
Match: AT1G22790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 100/218 (45.87%), Postives = 133/218 (61.01%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLPF----LVDREPDLNN--QLA 60
           M LAVEGGG FS+SASGYS  LTLL  G K  D PMRV+P+    +VD+EP+ +   QL 
Sbjct: 1   MLLAVEGGGLFSASASGYSKGLTLLFSGDKDVDRPMRVVPWNHYQVVDQEPEADPVLQLD 60

Query: 61  SRKTWISWRCASPSLRCFRWNPAG-PIPSPLKKAASTQRQDSSRTSP-----LSDNGKDH 120
           S K  +S  CA+ S  CF    AG   PSPL K    Q+Q    +SP     +S+ GKD 
Sbjct: 61  SIKNRVSRGCAA-SFSCFGGASAGLETPSPL-KVEPVQQQHREISSPESVVVVSEKGKDQ 120

Query: 121 VPSSDDDNL--ARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWT 180
           +  +D+ +   A K+ L+SSLK+ S A + S+++    E L   GS  +  + RRKVQW 
Sbjct: 121 ISEADNGSSKEAFKLSLRSSLKRPSVAESRSLEDIKEYETLSVDGSDLTGDMARRKVQWP 180

Query: 181 DTCGSELAEVKEFEPSEINASDDENDIGKAR-CLCTIM 204
           D CGSEL +V+EFEPSE+  SD+E ++G+ R C C IM
Sbjct: 181 DACGSELTQVREFEPSEMGLSDEEWEVGRQRTCSCVIM 216

[Close]
BLAST of Carg01616 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-30
Identity = 90/212 (42.45%), Postives = 117/212 (55.19%), Query Frame = 0 

Query: 1   MFLAVEGGGFFSSSASGYSSSLTLLLLGQKSEDNPMRVLP-----FLVDREPDLNNQLAS 60
           M  A EGGGFFSSSASGYS+ L LLLLGQK+E  P++V        LV  + D   +L S
Sbjct: 1   MLFAAEGGGFFSSSASGYSNGLALLLLGQKTEQKPIKVSSQWNHYHLVLEDSDTGFRLDS 60

Query: 61  RKTWISWRCASPSLRCFRWNPAGPIPSPLKKAASTQRQDSSRTSPLSDNGKDHVPSSDDD 120
            K W+S  C   SL CF                 ++R +       S+  KD  PS +D 
Sbjct: 61  SKNWLSSACT--SLICF--------------GRKSERLE-------SEGKKDEAPSVEDY 120

Query: 121 N---LARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSE 180
           N   +  +  LKSSLKK S +  V      G++ +   G  D  H++RRKVQW DTCG E
Sbjct: 121 NNCEVTNRFALKSSLKKRSFSDVVI-----GDDDVSRDGVVD--HIDRRKVQWPDTCGIE 180

Query: 181 LAEVKEFEPSEINASDDENDIGKAR-CLCTIM 204
           +AEV+EFEPSE++ S+DE   G  + C+CTIM
Sbjct: 181 IAEVREFEPSEVDESEDEFHHGSGKSCMCTIM 182

[Close]
BLAST of Carg01616 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 4.3e-06
Identity = 33/91 (36.26%), Postives = 46/91 (50.55%), Query Frame = 0 

Query: 113 DDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALGEKGSYDSSHVERRKVQWTDTCGSE 172
           ++++L+   +LKSSLKK               E L    S D    E++KVQW D  G E
Sbjct: 103 EEESLSNGEILKSSLKK---------------EVL---DSADGGRKEKKKVQWVDLMGKE 162

Query: 173 LAEVKEFEPSEINASDDENDIGKARCLCTIM 204
           LAE++EFE SE    +D    G   C+C I+
Sbjct: 163 LAEIREFESSE---EEDVRYDGDQSCVCVIL 172

[Close]
BLAST of Carg01616 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.8e-05
Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 0 

Query: 111 SSDDDNLARKMVLKSSLKKASDAPAVSVQNAGGNEALG------------EKGSYDSSHV 170
           S DDD+    +     L  A D   V  +   G + +G            +  S ++   
Sbjct: 20  SDDDDDHEEILEHVDGLTNAEDREEVDAKEEEG-QIVGDTLTLKSSLRKVDSNSTEAEKR 79

Query: 171 ERRKVQWTDTCGSELAEVKEFEPSEINASDDENDIGKARCLCTIM 204
           E++KVQW D  G ELAE++EFEPS+    D ++D GK  C+C I+
Sbjct: 80  EKKKVQWVDVIGKELAEIREFEPSD--EDDIDSDRGKT-CVCIIL 120

The following BLAST results are available for this feature:
BLAST of Carg01616 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7016404.11.2e-108100.00hypothetical protein SDJN02_21513 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023551469.11.4e-10799.01uncharacterized protein LOC111809268 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022939839.19.0e-10799.01uncharacterized protein LOC111445595 isoform X1 [Cucurbita moschata] >XP_0229398... [more]
XP_022993299.12.2e-10597.54uncharacterized protein LOC111489351 isoform X1 [Cucurbita maxima] >XP_022993300... [more]
XP_023551474.13.2e-8898.81uncharacterized protein LOC111809268 isoform X2 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of Carg01616 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg01616 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FIB84.3e-10799.01uncharacterized protein LOC111445595 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JSF21.1e-10597.54uncharacterized protein LOC111489351 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FHY91.0e-8798.81uncharacterized protein LOC111445595 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1BV872.2e-8786.27uncharacterized protein LOC111006056 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A6J1JSF62.5e-8697.02uncharacterized protein LOC111489351 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Carg01616 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G22790.11.3e-3445.87unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G22790.21.3e-3445.87unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G34010.12.5e-3042.45unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G13480.14.3e-0636.26unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G55475.12.8e-0532.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..117
NoneNo IPR availablePANTHERPTHR33401:SF3LOW AFFINITY POTASSIUM TRANSPORT SYSTEM PROTEINcoord: 1..203
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01616-RACarg01616-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity