Carg01566 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01566
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein STAY-GREEN LIKE, chloroplastic-like
LocationCarg_Chr15: 3255690 .. 3258833 (-)
RNA-Seq ExpressionCarg01566
SyntenyCarg01566
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTTCAGTGTGCTTCTTACTCTGTTCTTCCATCGCCAGCCAAGCCCAAGTTCGAATTTGTTGTGAGGAAGAAGCCTGTTGTTCTGTGTTCTTCTTTTCGTAGCACTCAGGCTTCTTACAATACTCTCGTCTCTGAGGTACCATTCTCTTTCCCTCTCTGTTCTTTCCATTTGTTTCTAGGTCATCTAGGTTTGATTCAAGCTTGGTTGATTTGAAGGGTCTTTTTGTGGGTGAATGAATCTATTCGGTTCTGTTTGATCTCGTGCTTAGAGATTTTCCTTGTCTGATTTTGATCTGCATTTTGTTCTTCAATGTTTGTGGTTTCCTTCTTGATCGACTTGAAGCCTGAGAGTTAAAAGGATTCTGTTGTTGAGTTTTGGGTTTTATCGAGAATGTATCGTAAGAAATCACGACCCTCTACCCTCCACAATGGTATGATATTGTTCACTTTAAGCATAAGCTCTCTGGCTTTGCTTGGTTTCCCCAAAAGGCTTTAGATCAATGGAGATACTATTCTTCCCTTTAGTTAGCCAATTTAAGACTCCTTTCCCAACCATCCTCCCCTGGAACAGCCTCCCTTTAATAGAGGCTTGACTCATTCTCTGGAATCCTCGAACAAAGTACATAGAGCCAGGTCTATGGAGCCTTCGAACAACCTTTCCTTAATCGAGGCTCGACTTCTTCTTTGGATCCCTCGAACAAAGTACACCATTTGTTTGACACTTGAGTCACTTTTGACTACACTTTCAAGGCTCACAACTTCTTTGTTCGACGTTTGAGGATTCTATTGACATGGTTAAGTTAAGGGCATGACTCTGATACCATTTTAGGAATCACGACCCTCCACAGTGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTAATTTTCGTAAAAGGCCTCATACCATTAGAGATGTATTCCTAACTTGTAAACCCTTGATCAATCCCTTAATTAGTCGATATGGAACTCCTCTCCCAACAATCCTCAACACCACAAAGGCTAAAATTCTCGATGATGCGCATGAAATGGGTTGCTGGATTTTGATTGTGCAATGTCGGTAGATATTGCTAAGAAGTTCAGCAGTTGAGTTACTATTGTGAAGAGTAAATACTGGATGATGTTTACAGAACCCATCATGTAATTTGCTTAGTTGGTTCCTTCAAATGAAATTTCTTGAACAGTTTGAACAATTATTCAATCAAAGCAGCCAAAATTCAAAAGGGTTCTTGCTGGTTCTTATGATGCATTGATGATTGGTAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGCTAAAAGTTGAATTCAGTAGAGAGGTGAAGAAGTGTGCAGGGATCATCCCAAGAACATACATACTATCACACTGTGACTTCACTGCTAACCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGGTACAAATCTATGGCTACTTCACTATCTGAATGGAACTATACATTGTTCTTTTCTTCTCATTTTTGGGTCTGTGAATGTTCATAGTTGAGAGGATGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTTCATTGCTATGTCAGCGGTCCTAATTCTTTGCTCGACCTTGCTGCAGAGTTTAGATACCACATTTTCTCCAAAGAATTGCCTCTTGTAAGTTTATTTCTATTACTATATCTCAAAGTTTGACATGGGGAACTGTAACAGCCCGGGTTTGATTCCCTGCCATGGTAGTCTAGTGGTAGAATAGTATCTTGCCACGGTATAGACTCGGGTACAATTCCCGGCTGGTGCATATTTTTATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAATAATTCTTTATAAGAGTGTGGAAACCTCTCTCTAGTAGACACGTTTTAAAACCGTATCACCGGAAAAAGCAGACAATATCTGTTAGCGGTGGACTTGAGCTTGGGCGGTTACAAGAACTCTCAGATTCAACCTACAACTATGGAAATGCTATGATAAGACTAAATGCCTCTCTTTTTGTTAAACAAGGTGCTTGAATCTGTCCTGTATGGAGATTCAATATTGTTTGGGGAGAATCCTGAGCTGCTAGATGCCCTGGTCAGGGTATATTTTCATTCTAGCTCGCCGAAGTACAATAGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGTAAACTTGATAACATGTTATGAAAATTTCATTGACTTAGACGTCTTGTTTCTCAAACTTTGTTTTGCCTACACTTTCCAGGGGAGGCATCATCATATGCAAGGGCTTCTAAGGGGTAGCAAGGACGTGCCCTCTCCTAAAAGGTTGAGTAGCCCAAAATCAATCTTTCAAGCTCTCTTTGCATTCATTATCTGTACTGCATTGCATAAACTGGTGAACTGATAAACTGCTTATCTCTAAGAAACTGCTGTCTTAATGAGTTTTATTCTCCATTTAATGCAATTTCTTTGTGGAAGGAGCCAAAGAGTACTCTTGTTCTGTTGAATGTATGAATCACTTTATTCTTTGACCAATAAAGGCATATTTGTTCCTGTAATTCTTGTGTTTTCAGAATCTAAGACCCATTGGAATGTTGACAAAGTGTTGTATGTTACGGAACAAAAGAGATGCTACCAGATGAACATAATATATAATATATGCAGATCAGTGGCTCAATCTAAGACCCATCCAAAGCAACATGAACAAACTCTAACACCTACTTACAAAATGGATGGCTTTGTTCATGAATATGCAACAACCTCGTTAAGAAACCTCACAATCACCTGCCTACACTAGAGCGACGACGACGACAAAGAAAAAACAGGGTCAATCTTTACTATTCGAGTCTCAGAATGGTCGGTTGGATTTGGAGGATGAAGATGTGTTGGCCTTGGAAAAATCCATCAGATCTTTGAAAAGGGCCTCCTCATGCTCTGCAGCTCTCATCGGGGTGGAAGGACCGAGCGACAGATTCTTGGTATTCCCGACTATCTTGTCATAAGAATTATAGCCATTGCTCAAATGGGGCGAAGTGCCTCCTGTAACAGCTTTTTGTTGCTCAAAATATTGTTGTCTTTGATTATATCTTGAGGGTGGGGGAGGGAGG

mRNA sequence

ATGGCTTTTCAGTGTGCTTCTTACTCTGTTCTTCCATCGCCAGCCAAGCCCAAGTTCGAATTTGTTGTGAGGAAGAAGCCTGTTGTTCTGTGTTCTTCTTTTCGTAGCACTCAGGCTTCTTACAATACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGCTAAAAGTTGAATTCAGTAGAGAGGTGAAGAAGTGTGCAGGGATCATCCCAAGAACATACATACTATCACACTGTGACTTCACTGCTAACCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGTTGAGAGGATGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTTCATTGCTATGTCAGCGGTCCTAATTCTTTGCTCGACCTTGCTGCAGACTCGCCGAAGTACAATAGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATGCAAGGGCTTCTAAGGGGTAGCAAGGACGTGCCCTCTCCTAAAAGGTTGAGTAGCCCAAAATCAATCTTTCAAGCTCTCTTTGCATTCATTATCTGTACTGCATTGCATAAACTGAATCTAAGACCCATTGGAATGTTGACAAAGTGTTGTATGTTACGGAACAAAAGAGATGCTACCAGATGAACATAATATATAATATATGCAGATCAGTGGCTCAATCTAAGACCCATCCAAAGCAACATGAACAAACTCTAACACCTACTTACAAAATGGATGGCTTTGTTCATGAATATGCAACAACCTCGTTAAGAAACCTCACAATCACCTGCCTACACTAGAGCGACGACGACGACAAAGAAAAAACAGGGTCAATCTTTACTATTCGAGTCTCAGAATGGTCGGTTGGATTTGGAGGATGAAGATGTGTTGGCCTTGGAAAAATCCATCAGATCTTTGAAAAGGGCCTCCTCATGCTCTGCAGCTCTCATCGGGGTGGAAGGACCGAGCGACAGATTCTTGGTATTCCCGACTATCTTGTCATAAGAATTATAGCCATTGCTCAAATGGGGCGAAGTGCCTCCTGTAACAGCTTTTTGTTGCTCAAAATATTGTTGTCTTTGATTATATCTTGAGGGTGGGGGAGGGAGG

Coding sequence (CDS)

ATGGCTTTTCAGTGTGCTTCTTACTCTGTTCTTCCATCGCCAGCCAAGCCCAAGTTCGAATTTGTTGTGAGGAAGAAGCCTGTTGTTCTGTGTTCTTCTTTTCGTAGCACTCAGGCTTCTTACAATACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGCTAAAAGTTGAATTCAGTAGAGAGGTGAAGAAGTGTGCAGGGATCATCCCAAGAACATACATACTATCACACTGTGACTTCACTGCTAACCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGTTGAGAGGATGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTTCATTGCTATGTCAGCGGTCCTAATTCTTTGCTCGACCTTGCTGCAGACTCGCCGAAGTACAATAGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATGCAAGGGCTTCTAAGGGGTAGCAAGGACGTGCCCTCTCCTAAAAGGTTGAGTAGCCCAAAATCAATCTTTCAAGCTCTCTTTGCATTCATTATCTGTACTGCATTGCATAAACTGAATCTAAGACCCATTGGAATGTTGACAAAGTGTTGTATGTTACGGAACAAAAGAGATGCTACCAGATGA

Protein sequence

MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEASKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAADSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALFAFIICTALHKLNLRPIGMLTKCCMLRNKRDATR
Homology
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BLAST of Carg01566 vs. NCBI nr
Match: KAG7016453.1 (Protein STAY-GREEN LIKE, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.3 bits (1222), Expect = 2.9e-130
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAADSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDV 180
           KVKDEMCLHVHCYVSGPNSLLDLAADSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDV
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAADSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDV 180

Query: 181 PSPKRLSSPKSIFQALFAFIICTALHKLNLRPIGMLTKCCMLRNKRDATR 231
           PSPKRLSSPKSIFQALFAFIICTALHKLNLRPIGMLTKCCMLRNKRDATR
Sbjct: 181 PSPKRLSSPKSIFQALFAFIICTALHKLNLRPIGMLTKCCMLRNKRDATR 230

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BLAST of Carg01566 vs. NCBI nr
Match: XP_022939533.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 407.9 bits (1047), Expect = 5.7e-110
Identity = 207/251 (82.47%), Postives = 208/251 (82.87%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLHVHCYVSGPNSLLDLAA+                                  
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 209
                    SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 240

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BLAST of Carg01566 vs. NCBI nr
Match: XP_023551158.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.1 bits (1024), Expect = 2.7e-107
Identity = 203/251 (80.88%), Postives = 205/251 (81.67%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVL  PAKPKFEFVVRKKPVVLCSSFR TQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLHVHCYVSGPNSLLDLAA+                                  
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 209
                    SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPK+LSSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240

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BLAST of Carg01566 vs. NCBI nr
Match: XP_022993907.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 394.0 bits (1011), Expect = 8.6e-106
Identity = 200/251 (79.68%), Postives = 204/251 (81.27%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVLPSP KPKFEFVVRKKPVVL  SFR+TQASYNTLVSEAVRILVPPARFEA
Sbjct: 62  MAFQCASYSVLPSPTKPKFEFVVRKKPVVLFFSFRTTQASYNTLVSEAVRILVPPARFEA 121

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 122 SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 181

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLH+HCYVSGPNSLLDLAA+                                  
Sbjct: 182 KVKDEMCLHIHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 241

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 209
                    SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPK+LSSPKSIFQALF
Sbjct: 242 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 301

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BLAST of Carg01566 vs. NCBI nr
Match: KAG6578930.1 (Magnesium dechelatase SGRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365.2 bits (936), Expect = 4.3e-97
Identity = 184/229 (80.35%), Postives = 186/229 (81.22%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLHVHCYVSGPNSLLDLAA+                                  
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRL 187
                    SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKR+
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRI 229

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BLAST of Carg01566 vs. ExPASy Swiss-Prot
Match: Q94AQ9 (Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGRL PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.0e-48
Identity = 111/225 (49.33%), Postives = 132/225 (58.67%), Query Frame = 0 

Query: 24  RKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEASKLKVEFSREV---KKCAGII-P 83
           R+  V   S+      SYNTLVSEAVR+LVP A F++SKLKVEF  E+   K   GII P
Sbjct: 39  RRISVPRSSAISDGGVSYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITP 98

Query: 84  RTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNS 143
           RTYILSHCDFTANLTLTIS+VINLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG + 
Sbjct: 99  RTYILSHCDFTANLTLTISNVINLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSL 158

Query: 144 LLDLAAD-------------------------------------------SPKYNRLECW 202
           L D+AA+                                           +PKYNR+ECW
Sbjct: 159 LQDVAAELRYHIFSKELPLVLKAVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECW 218

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BLAST of Carg01566 vs. ExPASy Swiss-Prot
Match: A2Z3E5 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.0e-26
Identity = 69/160 (43.12%), Postives = 84/160 (52.50%), Query Frame = 0 

Query: 52  LVPPARFEASKLKVEF---SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 111
           L  PA FEASKLKV F     E  +  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 112 WYNK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAA-------------------- 163
           WYNK   D+VVAEWKKV+  M LHVHC++SG + LLDL A                    
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

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BLAST of Carg01566 vs. ExPASy Swiss-Prot
Match: Q66WT5 (Magnesium dechelatase SGR2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR2 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.1e-26
Identity = 81/224 (36.16%), Postives = 110/224 (49.11%), Query Frame = 0 

Query: 5   CASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEASKLK 64
           C+  + L  P+K K  F  +     LC + R ++    ++V   V  L  PA FEASKLK
Sbjct: 2   CSLATNLLLPSKMKPVFPEKLSTSSLCVTTRRSKMKNRSIV--PVARLFGPAIFEASKLK 61

Query: 65  VEF-SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNK---DDVVAEWK 124
           V F   + KK    +PRTY L+H D TA LTL IS  IN  QL+GW NK   D+VV EWK
Sbjct: 62  VLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVGEWK 121

Query: 125 KVKDEMCLHVHCYVSGPNSLLDLAA----------------------------------- 182
           KVK +M LHVHC++SG +  L+L A                                   
Sbjct: 122 KVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPELQES 181

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BLAST of Carg01566 vs. ExPASy Swiss-Prot
Match: A9YF60 (Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 9.1e-26
Identity = 70/176 (39.77%), Postives = 92/176 (52.27%), Query Frame = 0 

Query: 34  FRSTQASYNTLVSEAVRILVPPARFEASKLKVEF-SREVKKCAGIIPRTYILSHCDFTAN 93
           +++ + S+       V  L  PA FEASKLKV F   + KK  G +PRTY L+H D T+ 
Sbjct: 25  YKTRRKSHKNQSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSK 84

Query: 94  LTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAA---- 153
           LTL IS  IN  QL+GWYN   +D+VVAEWKKVK +M LHVHC++SG + +LDL A    
Sbjct: 85  LTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLDLFARLRY 144

Query: 154 ---------------------------------------DSPKYNRLECWGPLKDA 163
                                                  +  ++N++ECWGPLKDA
Sbjct: 145 YIFCKELPVVLKAFVHGDENLLKNYPELQQALVWVYFHSNIQEFNKVECWGPLKDA 200

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BLAST of Carg01566 vs. ExPASy Swiss-Prot
Match: Q652K1 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SGR PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.1e-26
Identity = 79/211 (37.44%), Postives = 102/211 (48.34%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MA   ++ S+LP P   +  +      VVL S   +++             L  PA FEA
Sbjct: 1   MAAATSTMSLLP-PITQQQRWHAADSLVVLASRCHNSRRRRRCRYVVPRARLFGPAIFEA 60

Query: 61  SKLKVEF---SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNK---DD 120
           SKLKV F     E  +  G +PRTY L+H D TA LTL +S  IN  QL+GWYNK   D+
Sbjct: 61  SKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQGWYNKLQRDE 120

Query: 121 VVAEWKKVKDEMCLHVHCYVSGPNSLLDLAA----------------------------- 163
           VVAEWKKV+  M LHVHC++SG + LLDL A                             
Sbjct: 121 VVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVHGDGNLFSRH 180

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BLAST of Carg01566 vs. ExPASy TrEMBL
Match: A0A6J1FLW5 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445411 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.8e-110
Identity = 207/251 (82.47%), Postives = 208/251 (82.87%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLHVHCYVSGPNSLLDLAA+                                  
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 209
                    SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 240

[Close]
BLAST of Carg01566 vs. ExPASy TrEMBL
Match: A0A6J1JU75 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489764 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.2e-106
Identity = 200/251 (79.68%), Postives = 204/251 (81.27%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVLPSP KPKFEFVVRKKPVVL  SFR+TQASYNTLVSEAVRILVPPARFEA
Sbjct: 62  MAFQCASYSVLPSPTKPKFEFVVRKKPVVLFFSFRTTQASYNTLVSEAVRILVPPARFEA 121

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 122 SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 181

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLH+HCYVSGPNSLLDLAA+                                  
Sbjct: 182 KVKDEMCLHIHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 241

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 209
                    SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPK+LSSPKSIFQALF
Sbjct: 242 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 301

[Close]
BLAST of Carg01566 vs. ExPASy TrEMBL
Match: A0A6J1JL65 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486879 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90
Identity = 173/244 (70.90%), Postives = 184/244 (75.41%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAF CA YS  PSP+KPKF+ V+  KPVVL SS RST+ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPVVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEF+REV KCAGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLHVHCYVSGPNSLLDL A+                                  
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 202
                    S KYNRLECWGPLKDAV GRHHHMQGLLR S+DV SPK+L +PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

[Close]
BLAST of Carg01566 vs. ExPASy TrEMBL
Match: A0A6J1H833 (protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461394 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.1e-90
Identity = 172/244 (70.49%), Postives = 183/244 (75.00%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAF CA YS  PSP+KPKF+ V+  KP VL SS RST+ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEF+REV KCAGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLHVHCYVSGPNSLLDL A+                                  
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 202
                    S KYNRLECWGPLKDAV GRHHHMQGLLR S+DV SPK+L +PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

[Close]
BLAST of Carg01566 vs. ExPASy TrEMBL
Match: A0A6J1CHX2 (protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011794 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.8e-88
Identity = 171/244 (70.08%), Postives = 182/244 (74.59%), Query Frame = 0 

Query: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60
           MAF CA YS  PSP KPKF+ V R  P VL SS R+T+ASY+TLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV  +RE+ K AGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 180
           KVKDEMCLHVHCYVSGPNSLLDLAA+                                  
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSVLFGENPELLDA 180

Query: 181 ---------SPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 202
                    S KYNRLECWGPLKDAVLGRHHHMQGLLRGSKD+ SPK+L SPKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKKLRSPKSIFQALF 240

[Close]
BLAST of Carg01566 vs. TAIR 10
Match: AT1G44000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-49
Identity = 111/225 (49.33%), Postives = 132/225 (58.67%), Query Frame = 0 

Query: 24  RKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEASKLKVEFSREV---KKCAGII-P 83
           R+  V   S+      SYNTLVSEAVR+LVP A F++SKLKVEF  E+   K   GII P
Sbjct: 39  RRISVPRSSAISDGGVSYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITP 98

Query: 84  RTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNS 143
           RTYILSHCDFTANLTLTIS+VINLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG + 
Sbjct: 99  RTYILSHCDFTANLTLTISNVINLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSL 158

Query: 144 LLDLAAD-------------------------------------------SPKYNRLECW 202
           L D+AA+                                           +PKYNR+ECW
Sbjct: 159 LQDVAAELRYHIFSKELPLVLKAVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECW 218

[Close]
BLAST of Carg01566 vs. TAIR 10
Match: AT4G11910.1 (INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 6.5e-27
Identity = 81/224 (36.16%), Postives = 110/224 (49.11%), Query Frame = 0 

Query: 5   CASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEASKLK 64
           C+  + L  P+K K  F  +     LC + R ++    ++V   V  L  PA FEASKLK
Sbjct: 2   CSLATNLLLPSKMKPVFPEKLSTSSLCVTTRRSKMKNRSIV--PVARLFGPAIFEASKLK 61

Query: 65  VEF-SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNK---DDVVAEWK 124
           V F   + KK    +PRTY L+H D TA LTL IS  IN  QL+GW NK   D+VV EWK
Sbjct: 62  VLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVGEWK 121

Query: 125 KVKDEMCLHVHCYVSGPNSLLDLAA----------------------------------- 182
           KVK +M LHVHC++SG +  L+L A                                   
Sbjct: 122 KVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPELQES 181

[Close]
BLAST of Carg01566 vs. TAIR 10
Match: AT4G22920.1 (non-yellowing 1 )

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24
Identity = 74/211 (35.07%), Postives = 98/211 (46.45%), Query Frame = 0 

Query: 10  VLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEASKLKVEF-S 69
           +LP+  KP +              F + ++         V  L  PA FE+SKLKV F  
Sbjct: 9   LLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESSKLKVLFLG 68

Query: 70  REVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDE 129
            + KK    +PRTY L+H D TA LTL IS  IN  QL+GW N   +D+VVAEWKKVK +
Sbjct: 69  VDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVVAEWKKVKGK 128

Query: 130 MCLHVHCYVSGPNSLLDLAA---------------------------------------- 174
           M LHVHC++SG + LLDL A                                        
Sbjct: 129 MSLHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPELQEALVWVY 188

[Close]
BLAST of Carg01566 vs. TAIR 10
Match: AT4G11911.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 6.7e-24
Identity = 73/205 (35.61%), Postives = 101/205 (49.27%), Query Frame = 0 

Query: 5   CASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEASKLK 64
           C+  + L  PA  K +F  +++   + S+ RS++    ++    V  L   A FEASKL 
Sbjct: 2   CSLMASLLLPANLKPDFSDKERSSSIPSTTRSSKRKKQSMF--PVARLFGQAIFEASKLN 61

Query: 65  VEF-SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWK 124
           V+F   + KK    +PRTY  +H D TA LTL IS  IN  QL+GW N   +D+VVAEW+
Sbjct: 62  VKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVAEWR 121

Query: 125 KVKDEMCLHVHCYVSGPNSLLDLAAD---------------------------------- 163
           KVK  M LHVHC++SG + LLDL A+                                  
Sbjct: 122 KVKSNMSLHVHCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPELHEA 181

The following BLAST results are available for this feature:
BLAST of Carg01566 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7016453.12.9e-130100.00Protein STAY-GREEN LIKE, chloroplastic, partial [Cucurbita argyrosperma subsp. a... [more]
XP_022939533.15.7e-11082.47protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita moschata][more]
XP_023551158.12.7e-10780.88protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022993907.18.6e-10679.68protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima][more]
KAG6578930.14.3e-9780.35Magnesium dechelatase SGRL, chloroplastic, partial [Cucurbita argyrosperma subsp... [more]
BLAST of Carg01566 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AQ95.0e-4849.33Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR... [more]
A2Z3E57.0e-2643.13Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR ... [more]
Q66WT59.1e-2636.16Magnesium dechelatase SGR2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR... [more]
A9YF609.1e-2639.77Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1... [more]
Q652K19.1e-2637.44Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SG... [more]
BLAST of Carg01566 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FLW52.8e-11082.47protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1JU754.2e-10679.68protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1JL652.4e-9070.90protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1H8337.1e-9070.49protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146... [more]
A0A6J1CHX21.8e-8870.08protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110... [more]
BLAST of Carg01566 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G44000.13.5e-4949.33unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G11910.16.5e-2736.16INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidops... [more]
AT4G22920.13.0e-2435.07non-yellowing 1 [more]
AT4G11911.16.7e-2435.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024438Staygreen proteinPFAMPF12638Staygreencoord: 57..145
e-value: 6.3E-29
score: 100.7
NoneNo IPR availablePANTHERPTHR31750PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATEDcoord: 23..146
NoneNo IPR availablePANTHERPTHR31750:SF18PROTEIN STAY-GREEN LIKE, CHLOROPLASTICcoord: 146..200
coord: 23..146
NoneNo IPR availablePANTHERPTHR31750PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATEDcoord: 146..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01566-RACarg01566-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane