Carg01495 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01495
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	mediator of RNA polymerase II transcription subunit 1 isoform X1
Location	Carg_Chr15: 3674609 .. 3678869 (+)
RNA-Seq Expression	Carg01495
Synteny	Carg01495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGAAGTGAACCCACTTTAGTTCCAGAATGGTTGAGAAATACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCATTTTCAGTCGCCTTCGCCCCACTCAGGTACTGACTCTTTCTTTCTTTCCTTTTTTCTGTATATGTTTATTGTTACATGCTTTCAATAAAGATGCTTTCACGTACTGCTGACTTGCCTTTGTTTTGATGTTGTGAACACCGTTAATGTATATCCTGTGTTGTTTAGATGTGCCTTCTCAATCTCAACCGAGAAATAGAACTTCAAAGACCACTGGTGATTTTGACACTTCACGTCCTGCTTTTCTGGATCGGACAGCTTCATCAAATTCAAGGAGAAGTTCAAGCAATGGCTCTGCCAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGACAGGTTTAACTTTGGGGATAATTGGGACCGGGACTCTCATGACCCTCTGGGAAAGTTACTTCCCAACAGGGTTGATAAAGATGCTTTGCGGCGCTCCCATTCTATGGTATCCAGGAAGCAAGATGAGTTGTTTCACCGAAGAGTTGCAACAGATTTGAAAGCTGGTGTCAACAGCAGCAATGGAATGCCTCCTGGAATTAGTGTTGGTAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCATCACTGGGATCTGAAGAAAAGCAAGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCATCAGTTCAAAGCTTACCAATTGGGAATTCGGCCTTAATTGTTGGTGGAGAGGGATGGACGTCTGCCCTTGCTGAGGTGCCCAGTATGATTGGAAGTACCACAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTGTGACAGCTGGACTAAATATGGCTGAAGCGCTGGTGCAGGCTCCATCTCGAGCTCGTGCTGCTCCCCAGGCTTCTGAGGTACCCTTCTATAACCTTCTTCTGCTGTATATTATGTGCATTTTTTATCTAACAGTCTCATCGTTTTACCCCTCACTTTGGTAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCGGTGACACCTTCTATGCCAAAAGCTTCGGTAATTGGTGCTAATGCAATTGTTGAATCTTTGTTGGATAGATTTGTTCCTGCCTCTTTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGATTGTTGATTCAAAAATGAAAAGGTTGGTACTAAAAATAAGAGAACTGAGAACCATCTATGTGGTACCTTCACAACTTGTGTCGATTGCTGATTTCATATAAGACTAATAATACTCTCTTCGCAGCTGCTTTTGTGTCGTAGTATCAGGTACTTAGGAAGTACATATGATAATAGTCATTTTTTGATAAAATATAATGAAAACTATGCGAGAAGAATACTAGTTATTGTTCTGATATTTTTCTGCACCTGCTGCTGGCGTCTGGTGAATTAAATTTTTCGATTTAACTTGTTAAATAAACTCTGCTTCAACATTTTAGAAACTGTAGAATTTTTCGTGGAAGTTTATAATTCAAGTATTCTATCTCTTCACACATTGACTTAAGAACATTGTGTATGTGTTAGATAGTGGAACTCAAAGCATTTGCTAGAAGTTTCTGGTTCAAAGTCATTTATGATGTGCTAGATTATGAGCCACATTTCCCCCTTTTATTTGATCTGAAACTCAATTTAAGGATGATTGAAAGGATAAATACTAGTTTTTCCCAGAAAAAGGGTGCCAGAGGGCTTTATCATCATCTAATGCATTCTTTCATTTAAGAAAGGGTTATTTTAAATTCTTCAAGGGGTTTGTCCTTATTTTCTTGCCTGACCACCTTTTTGGAAATTTGTAGAAACTAGATGATAGGAAAGAGATGATGAGAATTGTTTTTGGATCCAATTTCATAGTATGCGCACATGTGCTTTGCCTCTTTGACATTTTGCAGACTGGGTTATCTTTGGTTTACCACTTTTTATTCTCTCTCAAGGGTAGAAAAGGCCGGTGGTAGATTAAATAGGCTATAAGGGAAGTGTGAACTTTCCATATTAACTCTCTTCATTTGATTATTGTGCTGTAGCCAATTTGTTACTGGTGTCTGGTATTTTGTTTGTTAACGTGTTATATTTGGTAGGCAAGTCTTATTATTCATCATTTTGTTAAAATTTTACCTGAAAGATTGTTAAGCTGTTAACAGATTGCCAACCCCTTTTCTAGTATCAATAGTTATAACTTAACTGAGGTTTCCTCTTCTGAAAGGTTCCAATTTGTTCTTCTATTTGTTTTTTTTTTTTGAAGCTGATGTAAATTATGGTTGAGTTTCAGTATGGTGATGTAAAACTTGCTTAGCAGTATAATTCTTAATATAGACTTGGAACAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGAAGATGAAATTTTTTATTTTGTAGTGTTTTATTTAATGTTCTAAATTAATTTATTCACACCTGATCAATAATCGTTTAATCTTTGAAAAGTATAATTGGATTTAAATACGTTATTTTTAAATTTATACTTGAAGAAATAAATGGGAATTCAAACACAGACCATATCTTTCGAGATACTTTTAGAAGATTTGTCTTTAGAAGCAATTTTGATAAAATGAATCCAAAAAGTTCTCCACCCTTGTAATATGAATATAGTAATATATCTCTGATTATTATATTTGACTGCAAATCTCCTGTTTCTTCCCTTTAGATAATCATTAACGTTTTTGTTTTTCTGTTTGTATTTCGACAGGCGCTTAATTCGTCTGATAAATCAAAGCCCAAATTAGCATCAAGAACTGGAGAACTTAATGTTACTGTCAAGGGTGGACAGCCCCTGCCCTCGTCAGTCCATGCCAACCAATCTCGTGGAGGACATGTCAAGTCCGATGCTCAAAAGAGTTCTCATGGGAAGTTTCTTGTTTTAAAACCTGCACGAGAAAATGGTGTCTCCCCTACAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCGAATAATTCAAATGTTGCTTCTGTGGAGCGCAAGATGGCTAGCTTAGATCTCAAATCTGGAACAACTTTGGAAAAAAGACCGTCCTTATCTCAAGTCCAGAGTCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTTTCAGATTCATGCTCTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATTGACACTCCTGCAAGTCCTCATGTTCTTGAAAATGGTGTTGTGGAGAATACAAATGGAGATAGTTCTGAAGAGGTTAGATCATCTTGTGACAGTGGTGAAAAAACTGAGACCCACGTTGCTGCTGAATCTCTAGATGAAGAGGAGGCTGCGTTTCTTCGTTCTCTTGGATGGGATGAGAACTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAGATCAATTCTTTCTATCGGGAGGTGAACAAATACTTATATTGCTTTCAATAATCCCTCCCCACTTCTAAATATTGTTCTTGTCTCTATCACAGCTGATGAAGTTGTAAATTATAACCCATGCTCTAATTCCGATTGCAGTACATGAGCTTGAAGCCATCTCTAAAAATGGGCCGTAGCATTCAGCCTAAGATATCTGTGCCGTCTGAATCTCATGAGGACAGCAAGGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCGGAAGCCTGAATAATTTTTATTTTTCACCCATGAGAAGCTCTTGTTCACAATTTTTAAGGCAGTGGGGTTAGTTCTTTTTTTTTTTTCTTCACCTTTTTAATTTTTTTTTCTTTTTTTTTGCCTTCTTTTTGTTTTCATGGTTTTAAAGAAATGCTGATAGGAGTTGGGGTTGGAAGAAGAGATGGATGTTAATTGAACACTGAACAGTGCAAATAGTGCAATAAGTTACAGTTGCCCAAATCATCATCCTGCCTACCTCTACAGCGGGAATTTTTGCGGTGTTTAAAAGGGCAGTTGCTGAGGTTTGGCAGGCCAATGTTTTGTCTGCACTGAAAAAGATGTATGCAAATTGCATCTTTTTGTTTTGTTTTGGTTCTTTGTTATCACTTTCGAGGAAGTTTTTTTATTCTGGAATTTGCTTGC

mRNA sequence

ATGGAAAGAAGTGAACCCACTTTAGTTCCAGAATGGTTGAGAAATACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCATTTTCAGTCGCCTTCGCCCCACTCAGATGTGCCTTCTCAATCTCAACCGAGAAATAGAACTTCAAAGACCACTGGTGATTTTGACACTTCACGTCCTGCTTTTCTGGATCGGACAGCTTCATCAAATTCAAGGAGAAGTTCAAGCAATGGCTCTGCCAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGACAGGTTTAACTTTGGGGATAATTGGGACCGGGACTCTCATGACCCTCTGGGAAAGTTACTTCCCAACAGGGTTGATAAAGATGCTTTGCGGCGCTCCCATTCTATGGTATCCAGGAAGCAAGATGAGTTGTTTCACCGAAGAGTTGCAACAGATTTGAAAGCTGGTGTCAACAGCAGCAATGGAATGCCTCCTGGAATTAGTGTTGGTAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCATCACTGGGATCTGAAGAAAAGCAAGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCATCAGTTCAAAGCTTACCAATTGGGAATTCGGCCTTAATTGTTGGTGGAGAGGGATGGACGTCTGCCCTTGCTGAGGTGCCCAGTATGATTGGAAGTACCACAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTGTGACAGCTGGACTAAATATGGCTGAAGCGCTGGTGCAGGCTCCATCTCGAGCTCGTGCTGCTCCCCAGGCTTCTGAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCGGTGACACCTTCTATGCCAAAAGCTTCGGCGCTTAATTCGTCTGATAAATCAAAGCCCAAATTAGCATCAAGAACTGGAGAACTTAATGTTACTGTCAAGGGTGGACAGCCCCTGCCCTCGTCAGTCCATGCCAACCAATCTCGTGGAGGACATGTCAAGTCCGATGCTCAAAAGAGTTCTCATGGGAAGTTTCTTGTTTTAAAACCTGCACGAGAAAATGGTGTCTCCCCTACAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCGAATAATTCAAATGTTGCTTCTGTGGAGCGCAAGATGGCTAGCTTAGATCTCAAATCTGGAACAACTTTGGAAAAAAGACCGTCCTTATCTCAAGTCCAGAGTCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTTTCAGATTCATGCTCTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATTGACACTCCTGCAAGTCCTCATGTTCTTGAAAATGGTGTTGTGGAGAATACAAATGGAGATAGTTCTGAAGAGGTTAGATCATCTTGTGACAGTGGTGAAAAAACTGAGACCCACGTTGCTGCTGAATCTCTAGATGAAGAGGAGGCTGCGTTTCTTCGTTCTCTTGGATGGGATGAGAACTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAGATCAATTCTTTCTATCGGGAGTACATGAGCTTGAAGCCATCTCTAAAAATGGGCCGTAGCATTCAGCCTAAGATATCTGTGCCGTCTGAATCTCATGAGGACAGCAAGGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCGGAAGCCTGAATAATTTTTATTTTTCACCCATGAGAAGCTCTTGTTCACAATTTTTAAGGCAGTGGGGTTAGTTCTTTTTTTTTTTTCTTCACCTTTTTAATTTTTTTTTCTTTTTTTTTGCCTTCTTTTTGTTTTCATGGTTTTAAAGAAATGCTGATAGGAGTTGGGGTTGGAAGAAGAGATGGATGTTAATTGAACACTGAACAGTGCAAATAGTGCAATAAGTTACAGTTGCCCAAATCATCATCCTGCCTACCTCTACAGCGGGAATTTTTGCGGTGTTTAAAAGGGCAGTTGCTGAGGTTTGGCAGGCCAATGTTTTGTCTGCACTGAAAAAGATGTATGCAAATTGCATCTTTTTGTTTTGTTTTGGTTCTTTGTTATCACTTTCGAGGAAGTTTTTTTATTCTGGAATTTGCTTGC

Coding sequence (CDS)

ATGGAAAGAAGTGAACCCACTTTAGTTCCAGAATGGTTGAGAAATACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCATTTTCAGTCGCCTTCGCCCCACTCAGATGTGCCTTCTCAATCTCAACCGAGAAATAGAACTTCAAAGACCACTGGTGATTTTGACACTTCACGTCCTGCTTTTCTGGATCGGACAGCTTCATCAAATTCAAGGAGAAGTTCAAGCAATGGCTCTGCCAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGACAGGTTTAACTTTGGGGATAATTGGGACCGGGACTCTCATGACCCTCTGGGAAAGTTACTTCCCAACAGGGTTGATAAAGATGCTTTGCGGCGCTCCCATTCTATGGTATCCAGGAAGCAAGATGAGTTGTTTCACCGAAGAGTTGCAACAGATTTGAAAGCTGGTGTCAACAGCAGCAATGGAATGCCTCCTGGAATTAGTGTTGGTAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCATCACTGGGATCTGAAGAAAAGCAAGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCATCAGTTCAAAGCTTACCAATTGGGAATTCGGCCTTAATTGTTGGTGGAGAGGGATGGACGTCTGCCCTTGCTGAGGTGCCCAGTATGATTGGAAGTACCACAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTGTGACAGCTGGACTAAATATGGCTGAAGCGCTGGTGCAGGCTCCATCTCGAGCTCGTGCTGCTCCCCAGGCTTCTGAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCGGTGACACCTTCTATGCCAAAAGCTTCGGCGCTTAATTCGTCTGATAAATCAAAGCCCAAATTAGCATCAAGAACTGGAGAACTTAATGTTACTGTCAAGGGTGGACAGCCCCTGCCCTCGTCAGTCCATGCCAACCAATCTCGTGGAGGACATGTCAAGTCCGATGCTCAAAAGAGTTCTCATGGGAAGTTTCTTGTTTTAAAACCTGCACGAGAAAATGGTGTCTCCCCTACAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCGAATAATTCAAATGTTGCTTCTGTGGAGCGCAAGATGGCTAGCTTAGATCTCAAATCTGGAACAACTTTGGAAAAAAGACCGTCCTTATCTCAAGTCCAGAGTCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTTTCAGATTCATGCTCTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATTGACACTCCTGCAAGTCCTCATGTTCTTGAAAATGGTGTTGTGGAGAATACAAATGGAGATAGTTCTGAAGAGGTTAGATCATCTTGTGACAGTGGTGAAAAAACTGAGACCCACGTTGCTGCTGAATCTCTAGATGAAGAGGAGGCTGCGTTTCTTCGTTCTCTTGGATGGGATGAGAACTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAGATCAATTCTTTCTATCGGGAGTACATGAGCTTGAAGCCATCTCTAAAAATGGGCCGTAGCATTCAGCCTAAGATATCTGTGCCGTCTGAATCTCATGAGGACAGCAAGGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCGGAAGCCTGA

Protein sequence

MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRPAFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKLLPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQSRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKSDAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGAGSELSSSDSEA

Homology

[Close]

BLAST of Carg01495 vs. NCBI nr
Match: XP_022939265.1 (uncharacterized protein LOC111445235 [Cucurbita moschata] >KAG7016524.1 hypothetical protein SDJN02_21633, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 611/611 (100.00%), Postives = 611/611 (100.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420
           DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420

Query: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480
           VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG
Sbjct: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480

Query: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540
           QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA
Sbjct: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540

Query: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600
           FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA
Sbjct: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600

Query: 601 GSELSSSDSEA 612
           GSELSSSDSEA
Sbjct: 601 GSELSSSDSEA 611

[Close]

BLAST of Carg01495 vs. NCBI nr
Match: XP_023550773.1 (uncharacterized protein LOC111808812 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 607/611 (99.35%), Postives = 608/611 (99.51%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNR SKTTGDFDTSRP
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRPSKTTGDFDTSRP 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGK+
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKI 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420
           DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420

Query: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480
           VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG
Sbjct: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480

Query: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540
           QSNELTREEID PASPHVLENG VENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA
Sbjct: 481 QSNELTREEIDIPASPHVLENGAVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540

Query: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600
           FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA
Sbjct: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600

Query: 601 GSELSSSDSEA 612
           GSELSSSDSEA
Sbjct: 601 GSELSSSDSEA 611

[Close]

BLAST of Carg01495 vs. NCBI nr
Match: KAG6579002.1 (hypothetical protein SDJN03_23450, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 599/600 (99.83%), Postives = 599/600 (99.83%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420
           DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPH PLRSPNNSNVAS
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHGPLRSPNNSNVAS 420

Query: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480
           VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG
Sbjct: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480

Query: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540
           QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA
Sbjct: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540

Query: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600
           FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA
Sbjct: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600

[Close]

BLAST of Carg01495 vs. NCBI nr
Match: XP_022993051.1 (uncharacterized protein LOC111489184 [Cucurbita maxima])

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 602/611 (98.53%), Postives = 604/611 (98.85%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGK+
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKI 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           LPNRVDKDALRRSHSMVSRKQDELFHRRVATD KAGVNSSNGMPPGISVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDSKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPAT GAG LSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATPGAGSLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHV+S
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVRS 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420
           DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420

Query: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480
           VERKMA LDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS SSVKSPSIG
Sbjct: 421 VERKMAGLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSRSSVKSPSIG 480

Query: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540
           QSNELTREEID PASPHVLENG VENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA
Sbjct: 481 QSNELTREEIDIPASPHVLENGAVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540

Query: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600
           FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA
Sbjct: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600

Query: 601 GSELSSSDSEA 612
           GSELSSSDSEA
Sbjct: 601 GSELSSSDSEA 611

[Close]

BLAST of Carg01495 vs. NCBI nr
Match: XP_008460469.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo] >KAA0067384.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa] >TYK26525.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 989.9 bits (2558), Expect = 9.4e-285
Identity = 545/617 (88.33%), Postives = 570/617 (92.38%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLR+TGSVTGGGNSNHHF S S HSDVPS SQ RNR SKTTGDFDTSR 
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           +FLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRD+HDPLGK+
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           L NR+DKDALRRSHSMVSRKQ ELFHRRV T+LK+  NSSNG+  G SVGSSIQKAVFEK
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSH-NSSNGILSGTSVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGST 
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTP 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ SELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKA  L+SSDKSKPKLASRTGELN T+KGGQP PSSVHANQSR GHVK 
Sbjct: 301 SRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKP 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSN-----ANSQFALAPSVPHAPLRSPNN 420
           DAQKSSHGKFLVLKP RENGVS  AKDVSSPTSN     ANSQFALAPSVPHAPLRSPNN
Sbjct: 361 DAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 420

Query: 421 SNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480
           +NV+SVERK+ASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK
Sbjct: 421 TNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480

Query: 481 SPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLD 540
           SPSIGQSNELT EE+  PASP V+ENG VEN NG+SSEEV+ S DSGEKTE+HVAAESLD
Sbjct: 481 SPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLD 540

Query: 541 EEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHED 600
           EEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYM+LKPSLK+GR IQPKI VPSES ED
Sbjct: 541 EEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRED 600

Query: 601 SK-DGAGSELSSSDSEA 612
           SK DGAGSELSSSDSEA
Sbjct: 601 SKDDGAGSELSSSDSEA 616

[Close]

BLAST of Carg01495 vs. ExPASy TrEMBL
Match: A0A6J1FM76 (uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC111445235 PE=4 SV=1)

HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 611/611 (100.00%), Postives = 611/611 (100.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420
           DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420

Query: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480
           VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG
Sbjct: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480

Query: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540
           QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA
Sbjct: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540

Query: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600
           FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA
Sbjct: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600

Query: 601 GSELSSSDSEA 612
           GSELSSSDSEA
Sbjct: 601 GSELSSSDSEA 611

[Close]

BLAST of Carg01495 vs. ExPASy TrEMBL
Match: A0A6J1JV88 (uncharacterized protein LOC111489184 OS=Cucurbita maxima OX=3661 GN=LOC111489184 PE=4 SV=1)

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 602/611 (98.53%), Postives = 604/611 (98.85%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGK+
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKI 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           LPNRVDKDALRRSHSMVSRKQDELFHRRVATD KAGVNSSNGMPPGISVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDSKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPAT GAG LSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATPGAGSLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHV+S
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVRS 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420
           DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALAPSVPHAPLRSPNNSNVAS 420

Query: 421 VERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIG 480
           VERKMA LDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDS SSVKSPSIG
Sbjct: 421 VERKMAGLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSRSSVKSPSIG 480

Query: 481 QSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540
           QSNELTREEID PASPHVLENG VENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA
Sbjct: 481 QSNELTREEIDIPASPHVLENGAVENTNGDSSEEVRSSCDSGEKTETHVAAESLDEEEAA 540

Query: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600
           FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA
Sbjct: 541 FLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHEDSKDGA 600

Query: 601 GSELSSSDSEA 612
           GSELSSSDSEA
Sbjct: 601 GSELSSSDSEA 611

[Close]

BLAST of Carg01495 vs. ExPASy TrEMBL
Match: A0A5D3DT29 (Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001070 PE=4 SV=1)

HSP 1 Score: 989.9 bits (2558), Expect = 4.6e-285
Identity = 545/617 (88.33%), Postives = 570/617 (92.38%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLR+TGSVTGGGNSNHHF S S HSDVPS SQ RNR SKTTGDFDTSR 
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           +FLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRD+HDPLGK+
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           L NR+DKDALRRSHSMVSRKQ ELFHRRV T+LK+  NSSNG+  G SVGSSIQKAVFEK
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSH-NSSNGILSGTSVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGST 
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTP 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ SELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKA  L+SSDKSKPKLASRTGELN T+KGGQP PSSVHANQSR GHVK 
Sbjct: 301 SRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKP 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSN-----ANSQFALAPSVPHAPLRSPNN 420
           DAQKSSHGKFLVLKP RENGVS  AKDVSSPTSN     ANSQFALAPSVPHAPLRSPNN
Sbjct: 361 DAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 420

Query: 421 SNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480
           +NV+SVERK+ASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK
Sbjct: 421 TNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480

Query: 481 SPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLD 540
           SPSIGQSNELT EE+  PASP V+ENG VEN NG+SSEEV+ S DSGEKTE+HVAAESLD
Sbjct: 481 SPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLD 540

Query: 541 EEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHED 600
           EEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYM+LKPSLK+GR IQPKI VPSES ED
Sbjct: 541 EEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRED 600

Query: 601 SK-DGAGSELSSSDSEA 612
           SK DGAGSELSSSDSEA
Sbjct: 601 SKDDGAGSELSSSDSEA 616

[Close]

BLAST of Carg01495 vs. ExPASy TrEMBL
Match: A0A1S3CDT9 (mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 989.9 bits (2558), Expect = 4.6e-285
Identity = 545/617 (88.33%), Postives = 570/617 (92.38%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLR+TGSVTGGGNSNHHF S S HSDVPS SQ RNR SKTTGDFDTSR 
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           +FLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRD+HDPLGK+
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           L NR+DKDALRRSHSMVSRKQ ELFHRRV T+LK+  NSSNG+  G SVGSSIQKAVFEK
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSH-NSSNGILSGTSVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGST 
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTP 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ SELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKA  L+SSDKSKPKLASRTGELN T+KGGQP PSSVHANQSR GHVK 
Sbjct: 301 SRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKP 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSN-----ANSQFALAPSVPHAPLRSPNN 420
           DAQKSSHGKFLVLKP RENGVS  AKDVSSPTSN     ANSQFALAPSVPHAPLRSPNN
Sbjct: 361 DAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 420

Query: 421 SNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480
           +NV+SVERK+ASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK
Sbjct: 421 TNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480

Query: 481 SPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLD 540
           SPSIGQSNELT EE+  PASP V+ENG VEN NG+SSEEV+ S DSGEKTE+HVAAESLD
Sbjct: 481 SPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLD 540

Query: 541 EEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHED 600
           EEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYM+LKPSLK+GR IQPKI VPSES ED
Sbjct: 541 EEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRED 600

Query: 601 SK-DGAGSELSSSDSEA 612
           SK DGAGSELSSSDSEA
Sbjct: 601 SKDDGAGSELSSSDSEA 616

[Close]

BLAST of Carg01495 vs. ExPASy TrEMBL
Match: A0A1S3CC42 (mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 981.5 bits (2536), Expect = 1.6e-282
Identity = 543/617 (88.01%), Postives = 568/617 (92.06%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           MERSEPTLVPEWLR+TGSVTGGGNSNHHF S S HSDVPS SQ RNR SKTTGDFDTSR 
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120
           +FLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRD+HDPLGK+
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180
           L NR+DKDALRRSHSMVSRKQ ELFHRRV T+LK+  NSSNG+  G SVGSSIQKAVFEK
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSH-NSSNGILSGTSVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGST 
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTP 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ   LSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360
           SRQLIPVTPSMPKA  L+SSDKSKPKLASRTGELN T+KGGQP PSSVHANQSR GHVK 
Sbjct: 301 SRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKP 360

Query: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSN-----ANSQFALAPSVPHAPLRSPNN 420
           DAQKSSHGKFLVLKP RENGVS  AKDVSSPTSN     ANSQFALAPSVPHAPLRSPNN
Sbjct: 361 DAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 420

Query: 421 SNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480
           +NV+SVERK+ASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK
Sbjct: 421 TNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480

Query: 481 SPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLD 540
           SPSIGQSNELT EE+  PASP V+ENG VEN NG+SSEEV+ S DSGEKTE+HVAAESLD
Sbjct: 481 SPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLD 540

Query: 541 EEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHED 600
           EEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYM+LKPSLK+GR IQPKI VPSES ED
Sbjct: 541 EEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRED 600

Query: 601 SK-DGAGSELSSSDSEA 612
           SK DGAGSELSSSDSEA
Sbjct: 601 SKDDGAGSELSSSDSEA 613

[Close]

BLAST of Carg01495 vs. TAIR 10
Match: AT1G36990.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). )

HSP 1 Score: 394.4 bits (1012), Expect = 1.6e-109
Identity = 293/614 (47.72%), Postives = 373/614 (60.75%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPS-QSQPRNRTSKTTGDFDTSR 60
           M++ E +L PEWLR++G  +GGG+SNH   S S HSD  S Q   RNR S++  D D+  
Sbjct: 1   MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSASLQYNSRNRNSRSKSDVDSIH 60

Query: 61  PAFLDRTASSNSRRSSSNGSAKHAYSS--FNRGHRDKDREKEKDRFNFGDNWDRDSHDPL 120
             FLDR++S+NSRR SSNGSAKHAYSS  FNR  RDKDR ++KDR ++ D WD D+  PL
Sbjct: 61  SPFLDRSSSTNSRRGSSNGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPL 120

Query: 121 GKLLPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSS----NGMPPGISVGSSI 180
             +L  R D D LRRSHSMV+RKQ E   R +   L  G +S+    NG+  G S+G+S 
Sbjct: 121 RTILTGR-DPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSF 180

Query: 181 QKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVP 240
           Q+  F+KDFPSLG+EEKQ   ++ RVSSPG+SS VQ+LP+GNSALI GGEGWTSALAEVP
Sbjct: 181 QRTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVVQNLPVGNSALI-GGEGWTSALAEVP 240

Query: 241 SMIGSTTGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRL 300
           ++I      S       A S AG L+  +GLNMAEALVQAP+R    PQ    SVKTQRL
Sbjct: 241 NVIEKACTGSLTSPKANAVS-AGTLTGPSGLNMAEALVQAPARTHTPPQG---SVKTQRL 300

Query: 301 EELAIKQSRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGG---QP--LPSSV 360
           E+LAIKQSRQLIPV PS PK  +LNSSDKSK K   RTGE  +        QP  L  S 
Sbjct: 301 EDLAIKQSRQLIPVVPSAPKGLSLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSF 360

Query: 361 HANQSRGGHVKSDAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANSQFALA------ 420
            +N S  G +K +       K LVLKPARENGVS   K+  SP++N N++ A +      
Sbjct: 361 QSNPS--GQIKPEK------KLLVLKPARENGVS-AVKESGSPSANTNTRAASSQLMSNT 420

Query: 421 PSVPHAPLRSPNNSNVASVERKMAS-LDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSM 480
            S   AP+RS N+      E K AS   + SG T+EK+PS +Q QSR+ F++ +K+K + 
Sbjct: 421 QSTQSAPVRSTNSPK----ELKGASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTA 480

Query: 481 SSSAVLSDSCSSVKSPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDS 540
           S+S + +D  SS  S S     +L   +    + P         ++   S  EV  S   
Sbjct: 481 STS-ITTDPVSSSTSASSSVEVKLNSSKDLIASDP--------SSSQATSGVEVTDSVQV 540

Query: 541 GEKTETHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRS 596
              T    A ++ DEEEA FLRSLGW EN GE E LTEEEI+SF  +Y  L+P       
Sbjct: 541 ASHTSGFEATDTPDEEEAQFLRSLGWVENNGE-EYLTEEEIDSFLEQYKELRP------L 579

[Close]

BLAST of Carg01495 vs. TAIR 10
Match: AT4G08510.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). )

HSP 1 Score: 307.0 bits (785), Expect = 3.4e-83
Identity = 241/591 (40.78%), Postives = 327/591 (55.33%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60
           ME+ EP+LVPEWLR++G  +G G+SN         S   S    +NR +++  D D+   
Sbjct: 1   MEKREPSLVPEWLRSSGHGSGVGSSN---------SLSDSLRNSKNRNARSRSDADSVGS 60

Query: 61  AFLDRTASSNSRRSSSNGSAKHAYSS--FNRGHRDKDREKEKDRFNFGDNWDRDSHDPLG 120
            FLDR++S+N+RR SSNGS KHAYSS  FNR +RDKDR +EKDR ++ D WD DS  P G
Sbjct: 61  PFLDRSSSTNTRRGSSNGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFG 120

Query: 121 KLLPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVN----SSNGMPPGISVGSSIQ 180
             L  R  ++ LRRSHSM +RKQ     +      K G N    + +G+ PG S   S +
Sbjct: 121 TFLIGR-GEEPLRRSHSMTTRKQGNHLAQGFTVGYKNGGNINTFNGHGILPGTSPVKSSK 180

Query: 181 KAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPS 240
           +  F KDFP L  EE+ G  ++ R+SSPG S + QSL + N ALI+ GEGWTSALAEVP+
Sbjct: 181 RMGFNKDFPLLRGEERNGGPDVVRISSPGRSPTAQSLSVANPALII-GEGWTSALAEVPN 240

Query: 241 MIGSTTGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLE 300
           +I  + G+ S      + + +GP    A  NMAEALVQAP R    PQA       Q LE
Sbjct: 241 VIEKSGGAESHANVGNSATLSGP----ACRNMAEALVQAPGRTGTPPQA-------QTLE 300

Query: 301 ELAIKQSRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSV---HAN 360
           + AI+QSRQLIPV PS PK S  NSSDKSK K   R+GE  +         SSV   +  
Sbjct: 301 DRAIRQSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLGNMQ 360

Query: 361 QSRGGHVKSDAQKSSHGKFLVLKPARENGV----SPTAKDV--SSPTSNANSQFALAPSV 420
            + G  +K D  K    K ++LKPARENGV    SP    V  S PT+  ++QF      
Sbjct: 361 SNPGSQIKPDTTK----KLVILKPARENGVVAGGSPPNSRVAASQPTTAPSTQFT----- 420

Query: 421 PHAPLRSPNNSNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSA 480
             A +RS N       + + AS+++ +G   EK+ SL+Q QSR+ F++ +K+KT  + S 
Sbjct: 421 --ASVRSTNGPR----DLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCTNIST 480

Query: 481 VLSDSCSSVKSPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKT 540
             S + S + S    Q+N         P+SP   E   +        E V    +  E+ 
Sbjct: 481 DPSKTSSCILSSVEEQANSSKELVASDPSSPQAAERDEI-------MESVEKVSNVAERI 540

Query: 541 ETHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSL 577
               +A   D +EAAFL+SLGWDEN  ++   T EE+  + +++   KPSL
Sbjct: 541 SRFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREWCKKF---KPSL 544

The following BLAST results are available for this feature:

BLAST of Carg01495 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939265.1	0.0e+00	100.00	uncharacterized protein LOC111445235 [Cucurbita moschata] >KAG7016524.1 hypothet...	[more]
XP_023550773.1	0.0e+00	99.35	uncharacterized protein LOC111808812 [Cucurbita pepo subsp. pepo]	[more]
KAG6579002.1	0.0e+00	99.83	hypothetical protein SDJN03_23450, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022993051.1	0.0e+00	98.53	uncharacterized protein LOC111489184 [Cucurbita maxima]	[more]
XP_008460469.1	9.4e-285	88.33	PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cuc...	[more]

BLAST of Carg01495 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg01495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FM76	0.0e+00	100.00	uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]
A0A6J1JV88	0.0e+00	98.53	uncharacterized protein LOC111489184 OS=Cucurbita maxima OX=3661 GN=LOC111489184...	[more]
A0A5D3DT29	4.6e-285	88.33	Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CDT9	4.6e-285	88.33	mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CC42	1.6e-282	88.01	mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo...	[more]

BLAST of Carg01495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G36990.1	1.6e-109	47.72	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXP...	[more]
AT4G08510.1	3.4e-83	40.78	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 503..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 580..611
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..84
None	No IPR available	PANTHER	PTHR34112	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..610
None	No IPR available	PANTHER	PTHR34112:SF13	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..610

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01495-RA	Carg01495-RA	mRNA