Carg01478 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01478
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein FAF-like
LocationCarg_Chr15: 3764474 .. 3765949 (+)
RNA-Seq ExpressionCarg01478
SyntenyCarg01478
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGGTACAGTTATGTGATTTAGTAAAAGATGTGGAAAAAATGCTGTCAAATTCTTGTTAAACTCAATATTATTCTCTGATTACCATAATTATTCACCAACCAAAATAAATGGACGCAATTGACAAAATATAAAAATTAAAAATGTAATTTAACCTAATCTTGTAATACACCATTTTACATTATTATCATTAATCACTTTCTAAATAGAAATTAAAATAACAAAAAGTCCACTTTATCTTTGGGCCTAATGGGCCTGCCAAAAATAACATTGCAGTGGTATCCCTGAGCCCAATAAGCCCGTTTGTGACTCCCCATCCATGGGCTAGGCCCACTAAGAAGATGGGAGAAAAGTGACATGGTTTCATTGCTTTCTCTTGGAAGGTATTTCATTTACTGTACAGAAAAAAAATTACATTTAAATAGAAGAGAATATCTATGCTTGATAATACTCTCTACCCACTGGTGAATGAATAGTTGCAGAAGCTTTCTTCTTATTTACACAAAACTGTTGCATTTTCACTTGTGCAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG

mRNA sequence

ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG

Coding sequence (CDS)

ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG

Protein sequence

MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSMLVAVRSLET
Homology
BLAST of Carg01478 vs. NCBI nr
Match: KAG7016541.1 (hypothetical protein SDJN02_21650, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 629.4 bits (1622), Expect = 1.7e-176
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120
           SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE
Sbjct: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120

Query: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180
           NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL
Sbjct: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180

Query: 181 TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240
           TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI
Sbjct: 181 TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240

Query: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300
           DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP
Sbjct: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300

Query: 301 LRPIDDSMLVAVRSLET 318
           LRPIDDSMLVAVRSLET
Sbjct: 301 LRPIDDSMLVAVRSLET 317

BLAST of Carg01478 vs. NCBI nr
Match: KAG6579018.1 (hypothetical protein SDJN03_23466, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120
           SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE
Sbjct: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120

Query: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180
           NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL
Sbjct: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180

Query: 181 TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240
           TRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI
Sbjct: 181 TRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240

Query: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300
           DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP
Sbjct: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300

Query: 301 LRPIDDSMLVAVRSLET 318
           LRPIDDSMLVAVRSLET
Sbjct: 301 LRPIDDSMLVAVRSLET 317

BLAST of Carg01478 vs. NCBI nr
Match: XP_022939162.1 (uncharacterized protein LOC111445156 [Cucurbita moschata])

HSP 1 Score: 594.7 bits (1532), Expect = 4.6e-166
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTP-SSSSSIGSCNLLMDDLIGTESGVSLT 120
           SSQEEHQEVGQE+EDRVIRSFGIGII+SKLLTP SSSSSIGSCNLLMDDLIGTESGVSLT
Sbjct: 61  SSQEEHQEVGQEKEDRVIRSFGIGIITSKLLTPSSSSSSIGSCNLLMDDLIGTESGVSLT 120

Query: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180
           ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI
Sbjct: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180

Query: 181 LTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240
           LTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE
Sbjct: 181 LTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240

Query: 241 IDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300
           IDSIESEEGEDY+VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST
Sbjct: 241 IDSIESEEGEDYTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300

Query: 301 PLRPI 305
           PLRPI
Sbjct: 301 PLRPI 305

BLAST of Carg01478 vs. NCBI nr
Match: XP_023551345.1 (uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.7 bits (1454), Expect = 5.1e-157
Identity = 290/319 (90.91%), Postives = 297/319 (93.10%), Query Frame = 0

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFS+KRYLF ++KIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1   MDYFSSKRYLFGKVKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTP-----------SSSSSIGSCNLLMDDL 120
           SS+EEHQEVGQE+EDRVIRSFGIGIISSKLLTP           SSSSSIGSCNLLMDDL
Sbjct: 61  SSEEEHQEVGQEKEDRVIRSFGIGIISSKLLTPSSSSSSSSSSSSSSSSIGSCNLLMDDL 120

Query: 121 IGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQ 180
           IGTESGVSLTENTEETEEKLTHAYFDRP NC NLHGFTEQNQRCVPKKQFPPPIPSLATQ
Sbjct: 121 IGTESGVSLTENTEETEEKLTHAYFDRPRNCNNLHGFTEQNQRCVPKKQFPPPIPSLATQ 180

Query: 181 AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQ 240
           AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGV NQDLQ
Sbjct: 181 AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVHNQDLQ 240

Query: 241 FIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER 300
           FIEEDEGNEEIDSIE+E  ED +VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER
Sbjct: 241 FIEEDEGNEEIDSIETEGEEDCTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER 300

Query: 301 HVVHRHFDSTPLRPIDDSM 309
           HVVH HFDSTPLRPI   M
Sbjct: 301 HVVHGHFDSTPLRPIGTVM 319

BLAST of Carg01478 vs. NCBI nr
Match: XP_022992860.1 (uncharacterized protein LOC111489065 [Cucurbita maxima])

HSP 1 Score: 376.3 bits (965), Expect = 2.6e-100
Identity = 185/203 (91.13%), Postives = 189/203 (93.10%), Query Frame = 0

Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPS 165
           MDDLIGTE+ VSLT NTEETEEKLTHAYFDRPHNC N HGFTE NQRCVPKKQFPPPIPS
Sbjct: 1   MDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPS 60

Query: 166 LATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDN 225
           LATQAGQ+TRSPWILTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGV N
Sbjct: 61  LATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHN 120

Query: 226 QDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGN 285
           QDLQFIEEDEGNEEIDSIESE GED +VPEISSESFTYGG+GVD GVFCDRKLFCGVNGN
Sbjct: 121 QDLQFIEEDEGNEEIDSIESEGGEDCTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGN 180

Query: 286 LEERHVVHRHFDSTPLRPIDDSM 309
           LEERHVVH HFDSTPLRPI   M
Sbjct: 181 LEERHVVHGHFDSTPLRPIGTVM 203

BLAST of Carg01478 vs. ExPASy TrEMBL
Match: A0A6J1FG13 (uncharacterized protein LOC111445156 OS=Cucurbita moschata OX=3662 GN=LOC111445156 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTP-SSSSSIGSCNLLMDDLIGTESGVSLT 120
           SSQEEHQEVGQE+EDRVIRSFGIGII+SKLLTP SSSSSIGSCNLLMDDLIGTESGVSLT
Sbjct: 61  SSQEEHQEVGQEKEDRVIRSFGIGIITSKLLTPSSSSSSIGSCNLLMDDLIGTESGVSLT 120

Query: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180
           ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI
Sbjct: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180

Query: 181 LTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240
           LTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE
Sbjct: 181 LTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240

Query: 241 IDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300
           IDSIESEEGEDY+VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST
Sbjct: 241 IDSIESEEGEDYTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300

Query: 301 PLRPI 305
           PLRPI
Sbjct: 301 PLRPI 305

BLAST of Carg01478 vs. ExPASy TrEMBL
Match: A0A6J1JWW3 (uncharacterized protein LOC111489065 OS=Cucurbita maxima OX=3661 GN=LOC111489065 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.2e-100
Identity = 185/203 (91.13%), Postives = 189/203 (93.10%), Query Frame = 0

Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPS 165
           MDDLIGTE+ VSLT NTEETEEKLTHAYFDRPHNC N HGFTE NQRCVPKKQFPPPIPS
Sbjct: 1   MDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPS 60

Query: 166 LATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDN 225
           LATQAGQ+TRSPWILTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGV N
Sbjct: 61  LATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHN 120

Query: 226 QDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGN 285
           QDLQFIEEDEGNEEIDSIESE GED +VPEISSESFTYGG+GVD GVFCDRKLFCGVNGN
Sbjct: 121 QDLQFIEEDEGNEEIDSIESEGGEDCTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGN 180

Query: 286 LEERHVVHRHFDSTPLRPIDDSM 309
           LEERHVVH HFDSTPLRPI   M
Sbjct: 181 LEERHVVHGHFDSTPLRPIGTVM 203

BLAST of Carg01478 vs. ExPASy TrEMBL
Match: A0A6J1CJZ0 (uncharacterized protein LOC111011861 OS=Momordica charantia OX=3673 GN=LOC111011861 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 188/319 (58.93%), Postives = 226/319 (70.85%), Query Frame = 0

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFS +R LF +L+IIVSSFFGFLL AS+F  PMQ    K+ PV E+VRFSISGLKALI
Sbjct: 1   MDYFSGERDLFGKLRIIVSSFFGFLLCASTFWSPMQ--THKRRPVPESVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLT-PSSSSSIGSCNLLMDDLIGTESGVSLT 120
           SS+E   E G+E+  R+IRS G+GII SKLLT  SSSSSI SC LLMDDLIGTESGV LT
Sbjct: 61  SSEE--GEEGEEKAQRLIRSAGVGIIRSKLLTHSSSSSSIRSC-LLMDDLIGTESGVCLT 120

Query: 121 EN-TEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPW 180
            +  EE +EK +    D  ++  +     +QNQRC  +KQFPPPI  LA QAG RTR PW
Sbjct: 121 NSIAEEIDEKSS----DYRYHRVDHRDLDKQNQRCAAEKQFPPPISFLAAQAGPRTRPPW 180

Query: 181 ILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPG---VDNQDLQFIEEDE 240
           +LTR+ SD RL L LERVR+ Q MESHRENGRLIL  VP+P+P     D++DLQF+EED 
Sbjct: 181 VLTRHCSDGRLTLTLERVRHLQYMESHRENGRLILKFVPAPLPDDSEDDDRDLQFVEEDG 240

Query: 241 GN-------EEIDSIESEEGEDYSVPEISS---ESFTYGGEGVDGGVFCDRKLFCGVNGN 300
           G        E+I+SIE EEGE  ++ E S    +SFTYGGEG+ GG+F DR+ FC V   
Sbjct: 241 GREKRTEDAEDIESIECEEGE--AIEEASDPAFKSFTYGGEGIGGGMFRDRQPFCSV--- 300

Query: 301 LEERHVVHRHFDSTPLRPI 305
             +RHVV+ HF S PLRP+
Sbjct: 301 --DRHVVNGHFGSAPLRPM 303

BLAST of Carg01478 vs. ExPASy TrEMBL
Match: A0A0A0KRM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.0e-74
Identity = 193/335 (57.61%), Postives = 218/335 (65.07%), Query Frame = 0

Query: 1   MDYFS-TKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVE-AVRFSIS-GLK 60
           MDYFS  +  LF +LKIIVSSFF FLL +S+FRF    PIQK   +    + FSIS GLK
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRF----PIQKHNRIPPLLLSFSISGGLK 60

Query: 61  ALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSS-----------------SSIG 120
           +LISS++      Q  ED VIRS G+ II S LLT SSS                 SSI 
Sbjct: 61  SLISSKQ------QFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSFCFSSIR 120

Query: 121 SCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFP 180
           SCN  MDDLIGTESGV LT N+EE E   TH+ FD P+  T+ H F  QNQRCV KKQFP
Sbjct: 121 SCNFSMDDLIGTESGVCLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQFP 180

Query: 181 PPIPSLATQ-AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSP 240
           PPIP +ATQ AG R RSPW+LTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP  
Sbjct: 181 PPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVP-- 240

Query: 241 VPGVDNQD----LQFIEEDEGNEEI-DSIESEEGEDYSV-PEISSESFTYGGEGVDGGVF 300
              +D +D       IEE EGNEEI +SI+ + GED     EIS  S+TYGGEG  GG  
Sbjct: 241 ---IDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGGGG-- 300

Query: 301 CDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSM 309
                FCG NGN EERHVVH HF S PLRP+   M
Sbjct: 301 -GGMTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 314

BLAST of Carg01478 vs. ExPASy TrEMBL
Match: A0A5D3DS64 (Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002210 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 3.6e-68
Identity = 182/316 (57.59%), Postives = 208/316 (65.82%), Query Frame = 0

Query: 1   MDYFS-TKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSIS-GLKA 60
           MDYFS  +  LF +LKIIVSSFF FLL +S+FRFP+Q   Q Q P++  + FSIS GLK+
Sbjct: 1   MDYFSGGQPNLFSKLKIIVSSFFNFLLCSSTFRFPIQKHNQIQ-PLL--LPFSISAGLKS 60

Query: 61  LISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSL 120
           LISS++      Q  ED +I S G+ II              SCN  MDDLIGTESGV L
Sbjct: 61  LISSKQ------QVSEDPLIGSVGLAIIR-------------SCNFSMDDLIGTESGVCL 120

Query: 121 TENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQ-AGQRTRSP 180
           T N+EE E   TH+ FD     TN H F  QNQRC+ KKQ+PPPIP +ATQ AG R RSP
Sbjct: 121 TSNSEEME---THSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPFIATQAAGNRPRSP 180

Query: 181 WILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQD--LQFIEEDE 240
           WILTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP      D QD     IEE E
Sbjct: 181 WILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIE----DRQDHLQHLIEEKE 240

Query: 241 GNEEI-DSIESEEGEDYSV-PEISSESFTYGGE-GVDGGVFCDRKLFCGVNGNLEERHVV 300
           G+EEI +SIE + GED     EIS +S TYGGE G  GG      +FCGVNGN EERHVV
Sbjct: 241 GDEEIVESIECDGGEDEGTDSEISFKSCTYGGEGGGGGGGGGGGMMFCGVNGNFEERHVV 287

Query: 301 HRHFDSTPLRPIDDSM 309
           H H  S PLRP+   M
Sbjct: 301 HGHLGSAPLRPMGTVM 287

BLAST of Carg01478 vs. TAIR 10
Match: AT1G22110.1 (structural constituent of ribosome )

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-10
Identity = 61/219 (27.85%), Postives = 102/219 (46.58%), Query Frame = 0

Query: 46  VEAVRFSISGLKALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLL 105
           +E    S     ++ SS ++   +  ++    + S  +   SS     SSSS++G     
Sbjct: 1   MERASSSSDSSSSMASSSDQSLSINSDQTSPFVTSSMLSRTSS-----SSSSAVG----- 60

Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHG---FTEQNQRCVPKKQFPPP 165
             D IGTES   +  + +E  + ++ A    P      +G     E+  R    ++FPPP
Sbjct: 61  --DYIGTESCFDIL-SADEGNDVVSVA--SEPVKSRFRYGGRRREEREARAAAAREFPPP 120

Query: 166 IPSLATQAGQRTRSPWILTRYY-SDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVP 225
           IP LA         PW+L R   SD RLIL+ E+VR+H+   ++R NGRL L+LVP    
Sbjct: 121 IPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDD 180

Query: 226 GVD-NQDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSE 260
             D  Q+    + D+  ++ +  + +E +D    E+  +
Sbjct: 181 VFDLPQEPSHYQSDDEEDDDECDDEDECDDDDQQEVEDD 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7016541.11.7e-176100.00hypothetical protein SDJN02_21650, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6579018.11.1e-17599.68hypothetical protein SDJN03_23466, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022939162.14.6e-16698.36uncharacterized protein LOC111445156 [Cucurbita moschata][more]
XP_023551345.15.1e-15790.91uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo][more]
XP_022992860.12.6e-10091.13uncharacterized protein LOC111489065 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FG132.2e-16698.36uncharacterized protein LOC111445156 OS=Cucurbita moschata OX=3662 GN=LOC1114451... [more]
A0A6J1JWW31.2e-10091.13uncharacterized protein LOC111489065 OS=Cucurbita maxima OX=3661 GN=LOC111489065... [more]
A0A6J1CJZ01.6e-7658.93uncharacterized protein LOC111011861 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A0A0KRM22.0e-7457.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=3 SV=1[more]
A0A5D3DS643.6e-6857.59Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002... [more]
Match NameE-valueIdentityDescription
AT1G22110.13.4e-1027.85structural constituent of ribosome [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 158..215
e-value: 1.3E-13
score: 51.0
IPR021410The fantastic four familyPANTHERPTHR33155FANTASTIC FOUR-LIKE PROTEIN (DUF3049)coord: 7..256
NoneNo IPR availablePANTHERPTHR33155:SF17F2E2.18-RELATEDcoord: 7..256

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01478-RACarg01478-RAmRNA