Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGGTACAGTTATGTGATTTAGTAAAAGATGTGGAAAAAATGCTGTCAAATTCTTGTTAAACTCAATATTATTCTCTGATTACCATAATTATTCACCAACCAAAATAAATGGACGCAATTGACAAAATATAAAAATTAAAAATGTAATTTAACCTAATCTTGTAATACACCATTTTACATTATTATCATTAATCACTTTCTAAATAGAAATTAAAATAACAAAAAGTCCACTTTATCTTTGGGCCTAATGGGCCTGCCAAAAATAACATTGCAGTGGTATCCCTGAGCCCAATAAGCCCGTTTGTGACTCCCCATCCATGGGCTAGGCCCACTAAGAAGATGGGAGAAAAGTGACATGGTTTCATTGCTTTCTCTTGGAAGGTATTTCATTTACTGTACAGAAAAAAAATTACATTTAAATAGAAGAGAATATCTATGCTTGATAATACTCTCTACCCACTGGTGAATGAATAGTTGCAGAAGCTTTCTTCTTATTTACACAAAACTGTTGCATTTTCACTTGTGCAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG
mRNA sequence
ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG
Coding sequence (CDS)
ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG
Protein sequence
MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSMLVAVRSLET
Homology
BLAST of Carg01478 vs. NCBI nr
Match:
KAG7016541.1 (hypothetical protein SDJN02_21650, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 629.4 bits (1622), Expect = 1.7e-176
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
Query: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
Query: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120
SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE
Sbjct: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120
Query: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180
NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL
Sbjct: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180
Query: 181 TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240
TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI
Sbjct: 181 TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240
Query: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300
DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP
Sbjct: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300
Query: 301 LRPIDDSMLVAVRSLET 318
LRPIDDSMLVAVRSLET
Sbjct: 301 LRPIDDSMLVAVRSLET 317
BLAST of Carg01478 vs. NCBI nr
Match:
KAG6579018.1 (hypothetical protein SDJN03_23466, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0
Query: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
Query: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120
SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE
Sbjct: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTE 120
Query: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180
NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL
Sbjct: 121 NTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWIL 180
Query: 181 TRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240
TRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI
Sbjct: 181 TRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEI 240
Query: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300
DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP
Sbjct: 241 DSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTP 300
Query: 301 LRPIDDSMLVAVRSLET 318
LRPIDDSMLVAVRSLET
Sbjct: 301 LRPIDDSMLVAVRSLET 317
BLAST of Carg01478 vs. NCBI nr
Match:
XP_022939162.1 (uncharacterized protein LOC111445156 [Cucurbita moschata])
HSP 1 Score: 594.7 bits (1532), Expect = 4.6e-166
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0
Query: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
Query: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTP-SSSSSIGSCNLLMDDLIGTESGVSLT 120
SSQEEHQEVGQE+EDRVIRSFGIGII+SKLLTP SSSSSIGSCNLLMDDLIGTESGVSLT
Sbjct: 61 SSQEEHQEVGQEKEDRVIRSFGIGIITSKLLTPSSSSSSIGSCNLLMDDLIGTESGVSLT 120
Query: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180
ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI
Sbjct: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180
Query: 181 LTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240
LTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE
Sbjct: 181 LTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240
Query: 241 IDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300
IDSIESEEGEDY+VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST
Sbjct: 241 IDSIESEEGEDYTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300
Query: 301 PLRPI 305
PLRPI
Sbjct: 301 PLRPI 305
BLAST of Carg01478 vs. NCBI nr
Match:
XP_023551345.1 (uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 564.7 bits (1454), Expect = 5.1e-157
Identity = 290/319 (90.91%), Postives = 297/319 (93.10%), Query Frame = 0
Query: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
MDYFS+KRYLF ++KIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1 MDYFSSKRYLFGKVKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
Query: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTP-----------SSSSSIGSCNLLMDDL 120
SS+EEHQEVGQE+EDRVIRSFGIGIISSKLLTP SSSSSIGSCNLLMDDL
Sbjct: 61 SSEEEHQEVGQEKEDRVIRSFGIGIISSKLLTPSSSSSSSSSSSSSSSSIGSCNLLMDDL 120
Query: 121 IGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQ 180
IGTESGVSLTENTEETEEKLTHAYFDRP NC NLHGFTEQNQRCVPKKQFPPPIPSLATQ
Sbjct: 121 IGTESGVSLTENTEETEEKLTHAYFDRPRNCNNLHGFTEQNQRCVPKKQFPPPIPSLATQ 180
Query: 181 AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQ 240
AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGV NQDLQ
Sbjct: 181 AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVHNQDLQ 240
Query: 241 FIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER 300
FIEEDEGNEEIDSIE+E ED +VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER
Sbjct: 241 FIEEDEGNEEIDSIETEGEEDCTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER 300
Query: 301 HVVHRHFDSTPLRPIDDSM 309
HVVH HFDSTPLRPI M
Sbjct: 301 HVVHGHFDSTPLRPIGTVM 319
BLAST of Carg01478 vs. NCBI nr
Match:
XP_022992860.1 (uncharacterized protein LOC111489065 [Cucurbita maxima])
HSP 1 Score: 376.3 bits (965), Expect = 2.6e-100
Identity = 185/203 (91.13%), Postives = 189/203 (93.10%), Query Frame = 0
Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPS 165
MDDLIGTE+ VSLT NTEETEEKLTHAYFDRPHNC N HGFTE NQRCVPKKQFPPPIPS
Sbjct: 1 MDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPS 60
Query: 166 LATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDN 225
LATQAGQ+TRSPWILTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGV N
Sbjct: 61 LATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHN 120
Query: 226 QDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGN 285
QDLQFIEEDEGNEEIDSIESE GED +VPEISSESFTYGG+GVD GVFCDRKLFCGVNGN
Sbjct: 121 QDLQFIEEDEGNEEIDSIESEGGEDCTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGN 180
Query: 286 LEERHVVHRHFDSTPLRPIDDSM 309
LEERHVVH HFDSTPLRPI M
Sbjct: 181 LEERHVVHGHFDSTPLRPIGTVM 203
BLAST of Carg01478 vs. ExPASy TrEMBL
Match:
A0A6J1FG13 (uncharacterized protein LOC111445156 OS=Cucurbita moschata OX=3662 GN=LOC111445156 PE=3 SV=1)
HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0
Query: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
Query: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTP-SSSSSIGSCNLLMDDLIGTESGVSLT 120
SSQEEHQEVGQE+EDRVIRSFGIGII+SKLLTP SSSSSIGSCNLLMDDLIGTESGVSLT
Sbjct: 61 SSQEEHQEVGQEKEDRVIRSFGIGIITSKLLTPSSSSSSIGSCNLLMDDLIGTESGVSLT 120
Query: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180
ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI
Sbjct: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180
Query: 181 LTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240
LTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE
Sbjct: 181 LTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240
Query: 241 IDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300
IDSIESEEGEDY+VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST
Sbjct: 241 IDSIESEEGEDYTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300
Query: 301 PLRPI 305
PLRPI
Sbjct: 301 PLRPI 305
BLAST of Carg01478 vs. ExPASy TrEMBL
Match:
A0A6J1JWW3 (uncharacterized protein LOC111489065 OS=Cucurbita maxima OX=3661 GN=LOC111489065 PE=3 SV=1)
HSP 1 Score: 376.3 bits (965), Expect = 1.2e-100
Identity = 185/203 (91.13%), Postives = 189/203 (93.10%), Query Frame = 0
Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPS 165
MDDLIGTE+ VSLT NTEETEEKLTHAYFDRPHNC N HGFTE NQRCVPKKQFPPPIPS
Sbjct: 1 MDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPS 60
Query: 166 LATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDN 225
LATQAGQ+TRSPWILTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGV N
Sbjct: 61 LATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHN 120
Query: 226 QDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGN 285
QDLQFIEEDEGNEEIDSIESE GED +VPEISSESFTYGG+GVD GVFCDRKLFCGVNGN
Sbjct: 121 QDLQFIEEDEGNEEIDSIESEGGEDCTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGN 180
Query: 286 LEERHVVHRHFDSTPLRPIDDSM 309
LEERHVVH HFDSTPLRPI M
Sbjct: 181 LEERHVVHGHFDSTPLRPIGTVM 203
BLAST of Carg01478 vs. ExPASy TrEMBL
Match:
A0A6J1CJZ0 (uncharacterized protein LOC111011861 OS=Momordica charantia OX=3673 GN=LOC111011861 PE=3 SV=1)
HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 188/319 (58.93%), Postives = 226/319 (70.85%), Query Frame = 0
Query: 1 MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
MDYFS +R LF +L+IIVSSFFGFLL AS+F PMQ K+ PV E+VRFSISGLKALI
Sbjct: 1 MDYFSGERDLFGKLRIIVSSFFGFLLCASTFWSPMQ--THKRRPVPESVRFSISGLKALI 60
Query: 61 SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLT-PSSSSSIGSCNLLMDDLIGTESGVSLT 120
SS+E E G+E+ R+IRS G+GII SKLLT SSSSSI SC LLMDDLIGTESGV LT
Sbjct: 61 SSEE--GEEGEEKAQRLIRSAGVGIIRSKLLTHSSSSSSIRSC-LLMDDLIGTESGVCLT 120
Query: 121 EN-TEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPW 180
+ EE +EK + D ++ + +QNQRC +KQFPPPI LA QAG RTR PW
Sbjct: 121 NSIAEEIDEKSS----DYRYHRVDHRDLDKQNQRCAAEKQFPPPISFLAAQAGPRTRPPW 180
Query: 181 ILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPG---VDNQDLQFIEEDE 240
+LTR+ SD RL L LERVR+ Q MESHRENGRLIL VP+P+P D++DLQF+EED
Sbjct: 181 VLTRHCSDGRLTLTLERVRHLQYMESHRENGRLILKFVPAPLPDDSEDDDRDLQFVEEDG 240
Query: 241 GN-------EEIDSIESEEGEDYSVPEISS---ESFTYGGEGVDGGVFCDRKLFCGVNGN 300
G E+I+SIE EEGE ++ E S +SFTYGGEG+ GG+F DR+ FC V
Sbjct: 241 GREKRTEDAEDIESIECEEGE--AIEEASDPAFKSFTYGGEGIGGGMFRDRQPFCSV--- 300
Query: 301 LEERHVVHRHFDSTPLRPI 305
+RHVV+ HF S PLRP+
Sbjct: 301 --DRHVVNGHFGSAPLRPM 303
BLAST of Carg01478 vs. ExPASy TrEMBL
Match:
A0A0A0KRM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=3 SV=1)
HSP 1 Score: 289.3 bits (739), Expect = 2.0e-74
Identity = 193/335 (57.61%), Postives = 218/335 (65.07%), Query Frame = 0
Query: 1 MDYFS-TKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVE-AVRFSIS-GLK 60
MDYFS + LF +LKIIVSSFF FLL +S+FRF PIQK + + FSIS GLK
Sbjct: 1 MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRF----PIQKHNRIPPLLLSFSISGGLK 60
Query: 61 ALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSS-----------------SSIG 120
+LISS++ Q ED VIRS G+ II S LLT SSS SSI
Sbjct: 61 SLISSKQ------QFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSFCFSSIR 120
Query: 121 SCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFP 180
SCN MDDLIGTESGV LT N+EE E TH+ FD P+ T+ H F QNQRCV KKQFP
Sbjct: 121 SCNFSMDDLIGTESGVCLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQFP 180
Query: 181 PPIPSLATQ-AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSP 240
PPIP +ATQ AG R RSPW+LTRYYS+RRLILKLERV HQS+ES RENGRLILNLVP
Sbjct: 181 PPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVP-- 240
Query: 241 VPGVDNQD----LQFIEEDEGNEEI-DSIESEEGEDYSV-PEISSESFTYGGEGVDGGVF 300
+D +D IEE EGNEEI +SI+ + GED EIS S+TYGGEG GG
Sbjct: 241 ---IDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGGGG-- 300
Query: 301 CDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSM 309
FCG NGN EERHVVH HF S PLRP+ M
Sbjct: 301 -GGMTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 314
BLAST of Carg01478 vs. ExPASy TrEMBL
Match:
A0A5D3DS64 (Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002210 PE=3 SV=1)
HSP 1 Score: 268.5 bits (685), Expect = 3.6e-68
Identity = 182/316 (57.59%), Postives = 208/316 (65.82%), Query Frame = 0
Query: 1 MDYFS-TKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSIS-GLKA 60
MDYFS + LF +LKIIVSSFF FLL +S+FRFP+Q Q Q P++ + FSIS GLK+
Sbjct: 1 MDYFSGGQPNLFSKLKIIVSSFFNFLLCSSTFRFPIQKHNQIQ-PLL--LPFSISAGLKS 60
Query: 61 LISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSL 120
LISS++ Q ED +I S G+ II SCN MDDLIGTESGV L
Sbjct: 61 LISSKQ------QVSEDPLIGSVGLAIIR-------------SCNFSMDDLIGTESGVCL 120
Query: 121 TENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQ-AGQRTRSP 180
T N+EE E TH+ FD TN H F QNQRC+ KKQ+PPPIP +ATQ AG R RSP
Sbjct: 121 TSNSEEME---THSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPFIATQAAGNRPRSP 180
Query: 181 WILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQD--LQFIEEDE 240
WILTRYYS+RRLILKLERV HQS+ES RENGRLILNLVP D QD IEE E
Sbjct: 181 WILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIE----DRQDHLQHLIEEKE 240
Query: 241 GNEEI-DSIESEEGEDYSV-PEISSESFTYGGE-GVDGGVFCDRKLFCGVNGNLEERHVV 300
G+EEI +SIE + GED EIS +S TYGGE G GG +FCGVNGN EERHVV
Sbjct: 241 GDEEIVESIECDGGEDEGTDSEISFKSCTYGGEGGGGGGGGGGGMMFCGVNGNFEERHVV 287
Query: 301 HRHFDSTPLRPIDDSM 309
H H S PLRP+ M
Sbjct: 301 HGHLGSAPLRPMGTVM 287
BLAST of Carg01478 vs. TAIR 10
Match:
AT1G22110.1 (structural constituent of ribosome )
HSP 1 Score: 63.5 bits (153), Expect = 3.4e-10
Identity = 61/219 (27.85%), Postives = 102/219 (46.58%), Query Frame = 0
Query: 46 VEAVRFSISGLKALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLL 105
+E S ++ SS ++ + ++ + S + SS SSSS++G
Sbjct: 1 MERASSSSDSSSSMASSSDQSLSINSDQTSPFVTSSMLSRTSS-----SSSSAVG----- 60
Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHG---FTEQNQRCVPKKQFPPP 165
D IGTES + + +E + ++ A P +G E+ R ++FPPP
Sbjct: 61 --DYIGTESCFDIL-SADEGNDVVSVA--SEPVKSRFRYGGRRREEREARAAAAREFPPP 120
Query: 166 IPSLATQAGQRTRSPWILTRYY-SDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVP 225
IP LA PW+L R SD RLIL+ E+VR+H+ ++R NGRL L+LVP
Sbjct: 121 IPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDD 180
Query: 226 GVD-NQDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSE 260
D Q+ + D+ ++ + + +E +D E+ +
Sbjct: 181 VFDLPQEPSHYQSDDEEDDDECDDEDECDDDDQQEVEDD 204
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7016541.1 | 1.7e-176 | 100.00 | hypothetical protein SDJN02_21650, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6579018.1 | 1.1e-175 | 99.68 | hypothetical protein SDJN03_23466, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022939162.1 | 4.6e-166 | 98.36 | uncharacterized protein LOC111445156 [Cucurbita moschata] | [more] |
XP_023551345.1 | 5.1e-157 | 90.91 | uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo] | [more] |
XP_022992860.1 | 2.6e-100 | 91.13 | uncharacterized protein LOC111489065 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FG13 | 2.2e-166 | 98.36 | uncharacterized protein LOC111445156 OS=Cucurbita moschata OX=3662 GN=LOC1114451... | [more] |
A0A6J1JWW3 | 1.2e-100 | 91.13 | uncharacterized protein LOC111489065 OS=Cucurbita maxima OX=3661 GN=LOC111489065... | [more] |
A0A6J1CJZ0 | 1.6e-76 | 58.93 | uncharacterized protein LOC111011861 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A0A0KRM2 | 2.0e-74 | 57.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=3 SV=1 | [more] |
A0A5D3DS64 | 3.6e-68 | 57.59 | Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002... | [more] |
Match Name | E-value | Identity | Description | |
AT1G22110.1 | 3.4e-10 | 27.85 | structural constituent of ribosome | [more] |