Carg01430 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGCTGCTTGTACGCAACAAGTTTGGAAGTGGTAAGATTTTGGACTGTGTCCCAAATCGATCTGTGGTGGTGACTGAAGCGATAACAGAGAGAGTAATGGCGGGATGTTAGCGCTTGTCGGCGCCTAATTGGTTCCTGTTTGAAGCGAAGGAATCGTAGCAGAGACGACAACAATGGCGGGCTGTTTAGCCACTGTCACTCTTACAACCACTTCTCTTCAACTTTCCTCTTCTTCTCCATCGAACTGTCGTCCTCTTTTCAGTTTCAGGAGGCAAATTGTCGGACTGGGTATTTCCTCCGTAGCGCCAATCCTCCGTCGACGACGTGTGCCGTTTCAATTAGGTTTCAGAAGGTACGATGAGAAAGGCCGGTTTCGTGTCGATTATGTTGCAATTCCAGTGTTGAATTGCACCAGAAGTGGTGCGGATACCGATTTGGATTTTACAGAGTCGATCGATTGCGTGGGGACTGCTCAGGATGTGGAGTGTGTGGTTTCCTCGACTGATGAAGAATTAGGGATTTCTTCCGATTTTGATAATGATGGTGATGGTTCTGTAGCAGTCTTGGAGAAAGCCTGGGAGTTTGCTGTGTTGGTTTCGCCGTTTTTCTTTTGGGGTACGGCTATGGTGGCCATGAAAGAGGTGCTTCCAAGGTCTGGTCCTTTCTTCGTTTCCGCCTTTCGTCTTGTACCTGCCGGTTTCCTCTTGATTGCCTTTGCTGCTTTCCGCGGTCGCCCCTTTCCTTCTGGGTTTTCTGCTTGGATTTCCATCCTTCTTTTCGCTCTTGTCGACGCTACATTATTTCAGGGCTTTCTTGCTCAAGGCTTGCAGAGGACATCCGCAGGCTTGGGTAGTGTAAGTTCCATTTTTCTTGCATCTTTTGCTTTGTTATGTAAATGTCTTCTTAGTTCATTGCAGATTTCTGAAATTGGTAATTGGTGTATTAGTATATGTATATGTTGGTAGTGCTGTTAGGCAGAATTGAACAAAGAAAGCAAGAACACAACTGAAGACGAGAAAATTATTTCATCTTCTTTGCTTGCTTGATTAAGGGATCCTTTAATATTGAATCCCTTGTGATTTTGAAGAAGATTCAATGATAAACATGGATATATGGTTACAAAGAATTCGGGTATCTTATAAATTAACCTCCGGGTGTTTTGAAGTGTATGATCCATACGATTAGAAACGTATCAAGTAATTTGCAGCATTCCCTTAAGCTGAGTTCAACTGTTGACGATGCCACCACATGTTATTTCTTTGATGCCCAGCTTTTGCCCCCAAAACCTATTTATATAATAATGTAGGTTGGTATGGTTGAAGAACAGGATTGAAACTTCAGCTCTTTTCCATTGTATTTTGATTGAAATGAAGAGGAAGTTTTAATTTATGAATTGTTATAGGACGAAGGTTGAATTTGAATATTGAGATGGAAATGACATCCAGGAGGAAATAGTCGGTTTTCTCTGAATTTATTAATCTTAGATTATGGGAGCGTGTGGACTTTCAACCAATTTCGGGAGAGAAGAGAGAGATACCATGAGCCGAGGTATTTCATACTAGATTTGGGTAGATTGAAAACACCAGGCTTACTTCTTACACGGATTCGCAGGAAGATTCGTTAGGAATTTTAGAGCATTCTCAAGATAGACTTCATGTATGCTCCCATTGGAAGTATAATAAAGTTGAGAGATGTGTTCAAACTATGGCGATTTCTTTCCATTGATATTTATAGCATCCCACCCATACTCTACTTGGAGTTCTCTTGATAAGAACCTTTGTCTTTTTGATCTGTCTCTCATTTGTACCAACTGGGGGGAACTTTAGCTTTTTGTAGGCTTTATATATTATCATTCATTTCATTTTTCCAAAGACAAAAAAGGGGGAAAAAATCACATTTGGCACTTTTCTCACTATATCTCTGTACTCATTCAAGTATCATACGAAAATTATATTTATATCTCTTGTTTCTGTACCTACGCCTTCATTGCAGGTAATAATCGATTCTCAACCATTAACCGTGGCAGTGCTTGCAGCCTTCTTATTTGGTGAGTCCATCGGTTTAGTTGGAGCCGCTGGACTTGTACTTGGAGTTTTAGGACTTTTACTCCTTGAGGTACTCGTTTTTCCTCTCCTCGGTATAGTTGGGGCCCTTGTGTTAGTGTTACTGTCTTACAGATGCATTACAAAACTGGATGGTTATAGAGATGTGCATGATTAATGAGACTAACAAAGTGTAACTATCAACAAGCTTGATTTATGTAATTTGTGGCGGGTTTGGTGAGCTTTTGGGATGATGAAATCCAATTTTTGTAAGAAATAAAAACCGTAATTTTATAGTACTCTTCTCTAATAATGCAGGGAGGTTCCGAACATAAAATTTATACTGGATTTTGAGAACTACTGTGTACTCTTTGGCATCTTTAGAACTGCGATCTGATCAAATCTTTTGATATTTCAATCTAAATTTTCATATTCTTTGTAAACTTTGATTTAACCATCTTATGAATGCTCAGCTTGGCTTCTTGGCCTTTTTTAAATTAACTACTTTGTTTTCTCTTTCTTCCACAATAGAATAATGGTCTTTTTTGTGCGGTGTGCGCGAATGTCTTTAGTTTCTTTTAGGCGTTATGTTAGTACGATTATTCAAGAGTTATATTATATGAAAAGAGGTGGCATTAACAAAATCACGCGACCCATCTATCTGCACTTTATCAAAGCATAGCTTCTGTTTGATGTGGCACTCGGTTTGACAGGTTCCTTCACTTACTTTAGATGCAAGTAGCTTTTCGTTGTGGGGAAGTGGAGAGTGGTGGATGTTTCTAGCTGCACAGAGCATGGCGGTAGGTACCGTCATGGTCCGCTGGGTTTCAAAGTATTCTGATCCTATTATGGCAACTGGATGGGTAGGATCAACCGTTGAAGTGATCTCTTATGAAATCATATCACCGTTCTTTCTTATGCATTTCAGTGTACAGATATTTTTAGTGGACCCTTTTCGTCATCCTTGTTAAAAATGTATATGATCGCATGATTGAAGAAAATTAGTTTCCGATCTACCTTCAGCACATGTTCATAGTCCTCATGGGAAATTTCCTGCCCCCTTCGCCCCGTTAACCCATCATTTTATGATTTTGGTACATCAGAAGTGAGAGGAAGAGTTGTTGTCCAGTGTAGCATGCAGGCTATTAAATATAGAAAGCATCAACTTCAATGGAGTTCCTTATTGGAAGTTATGAAATACTTGAAGGATGCCTTTTACAAGGCCTTAGTCTATTGAACTAAATAAATGTAACTTTTTTATGTTACAGCACATGGTGATTGGTGGTCTCCCGCTTTTGGCGATCTGTTTCCTTAATCATGAGCCTGCAGTCAGTGGGAGTCTTCAGGATTTTACAACCAATGATATACTAGCACTCTTTTATGCATCTATATTTGGAAGTGCTGTTAGCTACGGTTCTTTCTTCTATAGTGCAACAAAAGGTTTCACACTTTCCCTAATAGCATTCTCTAGTTTTTAAGGCGTGTTTTGCTTTGAAGTTCAAATTCTCTCATCTTGTTGCTTTATTATTTATTATAAGTATGATCAAAGACATAAGAATAACATCACTTTATAGGTCTCACCTCGCCGGGTTAATAGGCATTTTGAAATCCATTTAGCTCAAGGTTCACTGGTTTTCTGATATGCTGTGTGCATCTGATCAAATTCTTAATGCCCCTTGATAATACTTTGTAGACATTCATGGCTCGTTACTTGATCTCCACTTTTGTGCTAATTCTCCATTGTGGATGGTTTTTTTTTACTAACAGGTAGTTTGACAAAGCTTAGCTCTCTCACCTTTCTCACTCCAATGTTTGCTTCAATTTTTGGGTAAGGTTCTACCCGCTATTTTACAACAGGGCACAAATACAATGAGTGAAATATCTACTTTACAGACACTTCAATGTTTCCTCCGTTCGTTTATGTCAGGTTTCTATATTTGGGAGAGACATTTTCACCTATTCAACTGGTTGGAGCCGTTGTCACTGTGGTTTCTATATACGTGGTCAACTATGGCAGTAGTTTGGAATGAGCTCACAAGATCTGTTCACGCTTTCAACATTCAAAACAAAGGTTGCCATTCATTATTGGACATGAAAGGCCAGTTTACATATTACTAAATTTAGAAGAAATTTCCACGATAGGATATACTTGATGCAATACTTTCTTGTGCCGCAATCTGATAGTACATGTGCGGTAGACAGATCAATCTTGTGCGTGCAAACGCACTTAGCAATGATGCATGATTATGGACATCTGCTAAGCTGCCTGTCAGGAGCCCTCGTCTCGCAAATCTCTTGCGAGTTTTGAACTATTAGGGAAAGATCATTTGTAGCATTTGTAATTTTAGTGGCCATTCGTCGTTGGACGAAGCCCGTTCGTAAGCTTGTATTCAAATTATGTATTTATGGCATTTGTAATATAAACTTCCTGTAATTATATATGTTCTTGCTT ATAGCTGCTTGTACGCAACAAGTTTGGAAGTGGTAAGATTTTGGACTGTGTCCCAAATCGATCTGTGGTGGTGACTGAAGCGATAACAGAGAGAGTAATGGCGGGATGTTAGCGCTTGTCGGCGCCTAATTGGTTCCTGTTTGAAGCGAAGGAATCGTAGCAGAGACGACAACAATGGCGGGCTGTTTAGCCACTGTCACTCTTACAACCACTTCTCTTCAACTTTCCTCTTCTTCTCCATCGAACTGTCGTCCTCTTTTCAGTTTCAGGAGGCAAATTGTCGGACTGGGTATTTCCTCCGTAGCGCCAATCCTCCGTCGACGACGTGTGCCGTTTCAATTAGGTTTCAGAAGGTACGATGAGAAAGGCCGGTTTCGTGTCGATTATGTTGCAATTCCAGTGTTGAATTGCACCAGAAGTGGTGCGGATACCGATTTGGATTTTACAGAGTCGATCGATTGCGTGGGGACTGCTCAGGATGTGGAGTGTGTGGTTTCCTCGACTGATGAAGAATTAGGGATTTCTTCCGATTTTGATAATGATGGTGATGGTTCTGTAGCAGTCTTGGAGAAAGCCTGGGAGTTTGCTGTGTTGGTTTCGCCGTTTTTCTTTTGGGGTACGGCTATGGTGGCCATGAAAGAGGTGCTTCCAAGGTCTGGTCCTTTCTTCGTTTCCGCCTTTCGTCTTGTACCTGCCGGTTTCCTCTTGATTGCCTTTGCTGCTTTCCGCGGTCGCCCCTTTCCTTCTGGGTTTTCTGCTTGGATTTCCATCCTTCTTTTCGCTCTTGTCGACGCTACATTATTTCAGGGCTTTCTTGCTCAAGGCTTGCAGAGGACATCCGCAGGCTTGGGTAGTGTAATAATCGATTCTCAACCATTAACCGTGGCAGTGCTTGCAGCCTTCTTATTTGGTGAGTCCATCGGTTTAGTTGGAGCCGCTGGACTTGTACTTGGAGTTTTAGGACTTTTACTCCTTGAGGTTCCTTCACTTACTTTAGATGCAAGTAGCTTTTCGTTGTGGGGAAGTGGAGAGTGGTGGATGTTTCTAGCTGCACAGAGCATGGCGGTAGGTACCGTCATGGTCCGCTGGGTTTCAAAGTATTCTGATCCTATTATGGCAACTGGATGGCACATGGTGATTGGTGGTCTCCCGCTTTTGGCGATCTGTTTCCTTAATCATGAGCCTGCAGTCAGTGGGAGTCTTCAGGATTTTACAACCAATGATATACTAGCACTCTTTTATGCATCTATATTTGGAAGTGCTGTTAGCTACGGTTCTTTCTTCTATAGTGCAACAAAAGGTAGTTTGACAAAGCTTAGCTCTCTCACCTTTCTCACTCCAATGTTTGCTTCAATTTTTGGGTTTCTATATTTGGGAGAGACATTTTCACCTATTCAACTGGTTGGAGCCGTTGTCACTGTGGTTTCTATATACGTGGTCAACTATGGCAGTAGTTTGGAATGAGCTCACAAGATCTGTTCACGCTTTCAACATTCAAAACAAAGGTTGCCATTCATTATTGGACATGAAAGGCCAGTTTACATATTACTAAATTTAGAAGAAATTTCCACGATAGGATATACTTGATGCAATACTTTCTTGTGCCGCAATCTGATAGTACATGTGCGGTAGACAGATCAATCTTGTGCGTGCAAACGCACTTAGCAATGATGCATGATTATGGACATCTGCTAAGCTGCCTGTCAGGAGCCCTCGTCTCGCAAATCTCTTGCGAGTTTTGAACTATTAGGGAAAGATCATTTGTAGCATTTGTAATTTTAGTGGCCATTCGTCGTTGGACGAAGCCCGTTCGTAAGCTTGTATTCAAATTATGTATTTATGGCATTTGTAATATAAACTTCCTGTAATTATATATGTTCTTGCTT ATGGCGGGCTGTTTAGCCACTGTCACTCTTACAACCACTTCTCTTCAACTTTCCTCTTCTTCTCCATCGAACTGTCGTCCTCTTTTCAGTTTCAGGAGGCAAATTGTCGGACTGGGTATTTCCTCCGTAGCGCCAATCCTCCGTCGACGACGTGTGCCGTTTCAATTAGGTTTCAGAAGGTACGATGAGAAAGGCCGGTTTCGTGTCGATTATGTTGCAATTCCAGTGTTGAATTGCACCAGAAGTGGTGCGGATACCGATTTGGATTTTACAGAGTCGATCGATTGCGTGGGGACTGCTCAGGATGTGGAGTGTGTGGTTTCCTCGACTGATGAAGAATTAGGGATTTCTTCCGATTTTGATAATGATGGTGATGGTTCTGTAGCAGTCTTGGAGAAAGCCTGGGAGTTTGCTGTGTTGGTTTCGCCGTTTTTCTTTTGGGGTACGGCTATGGTGGCCATGAAAGAGGTGCTTCCAAGGTCTGGTCCTTTCTTCGTTTCCGCCTTTCGTCTTGTACCTGCCGGTTTCCTCTTGATTGCCTTTGCTGCTTTCCGCGGTCGCCCCTTTCCTTCTGGGTTTTCTGCTTGGATTTCCATCCTTCTTTTCGCTCTTGTCGACGCTACATTATTTCAGGGCTTTCTTGCTCAAGGCTTGCAGAGGACATCCGCAGGCTTGGGTAGTGTAATAATCGATTCTCAACCATTAACCGTGGCAGTGCTTGCAGCCTTCTTATTTGGTGAGTCCATCGGTTTAGTTGGAGCCGCTGGACTTGTACTTGGAGTTTTAGGACTTTTACTCCTTGAGGTTCCTTCACTTACTTTAGATGCAAGTAGCTTTTCGTTGTGGGGAAGTGGAGAGTGGTGGATGTTTCTAGCTGCACAGAGCATGGCGGTAGGTACCGTCATGGTCCGCTGGGTTTCAAAGTATTCTGATCCTATTATGGCAACTGGATGGCACATGGTGATTGGTGGTCTCCCGCTTTTGGCGATCTGTTTCCTTAATCATGAGCCTGCAGTCAGTGGGAGTCTTCAGGATTTTACAACCAATGATATACTAGCACTCTTTTATGCATCTATATTTGGAAGTGCTGTTAGCTACGGTTCTTTCTTCTATAGTGCAACAAAAGGTAGTTTGACAAAGCTTAGCTCTCTCACCTTTCTCACTCCAATGTTTGCTTCAATTTTTGGGTTTCTATATTTGGGAGAGACATTTTCACCTATTCAACTGGTTGGAGCCGTTGTCACTGTGGTTTCTATATACGTGGTCAACTATGGCAGTAGTTTGGAATGA MAGCLATVTLTTTSLQLSSSSPSNCRPLFSFRRQIVGLGISSVAPILRRRRVPFQLGFRRYDEKGRFRVDYVAIPVLNCTRSGADTDLDFTESIDCVGTAQDVECVVSSTDEELGISSDFDNDGDGSVAVLEKAWEFAVLVSPFFFWGTAMVAMKEVLPRSGPFFVSAFRLVPAGFLLIAFAAFRGRPFPSGFSAWISILLFALVDATLFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLAAFLFGESIGLVGAAGLVLGVLGLLLLEVPSLTLDASSFSLWGSGEWWMFLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAICFLNHEPAVSGSLQDFTTNDILALFYASIFGSAVSYGSFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPIQLVGAVVTVVSIYVVNYGSSLE Homology
BLAST of Carg01430 vs. NCBI nr
Match: KAG7016588.1 (WAT1-related protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 822.8 bits (2124), Expect = 1.4e-234 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
BLAST of Carg01430 vs. NCBI nr
Match: XP_022939282.1 (WAT1-related protein At3g02690, chloroplastic [Cucurbita moschata] >XP_022939283.1 WAT1-related protein At3g02690, chloroplastic [Cucurbita moschata]) HSP 1 Score: 821.2 bits (2120), Expect = 4.1e-234 Identity = 428/429 (99.77%), Postives = 428/429 (99.77%), Query Frame = 0
BLAST of Carg01430 vs. NCBI nr
Match: KAG6579056.1 (WAT1-related protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 819.7 bits (2116), Expect = 1.2e-233 Identity = 428/429 (99.77%), Postives = 428/429 (99.77%), Query Frame = 0
BLAST of Carg01430 vs. NCBI nr
Match: XP_023550684.1 (WAT1-related protein At3g02690, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023550685.1 WAT1-related protein At3g02690, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 815.1 bits (2104), Expect = 2.9e-232 Identity = 425/429 (99.07%), Postives = 426/429 (99.30%), Query Frame = 0
BLAST of Carg01430 vs. NCBI nr
Match: XP_022993106.1 (WAT1-related protein At3g02690, chloroplastic [Cucurbita maxima]) HSP 1 Score: 811.2 bits (2094), Expect = 4.2e-231 Identity = 423/429 (98.60%), Postives = 424/429 (98.83%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy Swiss-Prot
Match: Q93V85 (WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02690 PE=1 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 5.9e-135 Identity = 250/334 (74.85%), Postives = 285/334 (85.33%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy Swiss-Prot
Match: P74436 (Uncharacterized transporter sll0355 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0355 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 2.2e-73 Identity = 160/302 (52.98%), Postives = 211/302 (69.87%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy Swiss-Prot
Match: O32256 (Uncharacterized transporter YvbV OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbV PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 8.8e-14 Identity = 80/283 (28.27%), Postives = 122/283 (43.11%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy Swiss-Prot
Match: P42194 (Protein PecM OS=Dickeya dadantii (strain 3937) OX=198628 GN=pecM PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.8e-12 Identity = 82/283 (28.98%), Postives = 126/283 (44.52%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy Swiss-Prot
Match: O34416 (Uncharacterized transporter YoaV OS=Bacillus subtilis (strain 168) OX=224308 GN=yoaV PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.4e-11 Identity = 68/283 (24.03%), Postives = 125/283 (44.17%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy TrEMBL
Match: A0A6J1FGD0 (WAT1-related protein At3g02690, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445247 PE=3 SV=1) HSP 1 Score: 821.2 bits (2120), Expect = 2.0e-234 Identity = 428/429 (99.77%), Postives = 428/429 (99.77%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy TrEMBL
Match: A0A6J1JVE3 (WAT1-related protein At3g02690, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489226 PE=3 SV=1) HSP 1 Score: 811.2 bits (2094), Expect = 2.0e-231 Identity = 423/429 (98.60%), Postives = 424/429 (98.83%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy TrEMBL
Match: A0A0A0KQD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G429960 PE=3 SV=1) HSP 1 Score: 693.7 bits (1789), Expect = 4.7e-196 Identity = 376/440 (85.45%), Postives = 388/440 (88.18%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy TrEMBL
Match: A0A1S3CK55 (WAT1-related protein At3g02690, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501378 PE=3 SV=1) HSP 1 Score: 679.9 bits (1753), Expect = 7.1e-192 Identity = 369/440 (83.86%), Postives = 383/440 (87.05%), Query Frame = 0
BLAST of Carg01430 vs. ExPASy TrEMBL
Match: A0A6J1CI41 (WAT1-related protein At3g02690, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011840 PE=3 SV=1) HSP 1 Score: 651.4 bits (1679), Expect = 2.7e-183 Identity = 351/420 (83.57%), Postives = 372/420 (88.57%), Query Frame = 0
BLAST of Carg01430 vs. TAIR 10
Match: AT3G02690.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 482.3 bits (1240), Expect = 4.2e-136 Identity = 250/334 (74.85%), Postives = 285/334 (85.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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