Carg01417 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01417
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription factor, TCP
Location	Carg_Chr15: 4134034 .. 4134795 (+)
RNA-Seq Expression	Carg01417
Synteny	Carg01417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTTCTGACGGCGTCAACTGCAACAATGGCGCCATTATTGATCATTCTCAGACTAACAACAATGGCGGTTTGGCCGTCAAAAAACCTCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGCCGCCGTATTCGTATGCCGATCATTTGTGCTGCTCGGGTTTTCCAACTTACCCGCGAGTTGGGCCACAAATCCGACGGTCAAACCATCGAGTGGCTTCTCCGTCAAGCGGAGCCTTCGATTATTGCTGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATTTCGGCTTCACTACGCGGTGGTTCTGCTGCTACTTCCTCTCTTGACCATAAGCCGCTTTTGGCTCCGGCGCCGTTCATTCTTGGCAAGCGCGTTAGAACGGACGACGATGGAGATAATAAAGACGACGGTAGCGGTGGCGGTGGCGGTGGTGGTGGCGTTTCGGTTGGCTCTACTGTGAGTTCGTTTATGAGTACGGCTGCCGCGGGTGGATATTGGGCGATTCCTACGAGGCCGGATTTCGGACAGGTGTGGAGCTTTGCAGCAGCAGCGGCGGCGGCTCCGGAGATGGTGATTCAACCAACCGCGGTTTCTCACCCGGCGTCGTTGTTCGTTCAACAGCAATCGATGGGAGAAGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGGCATCTGAATTTGCTTGCTTCTTTATCCGGTGGACCGGGAAGTTCCGGCCGAAGAGACAACGACCACCGTTGA

mRNA sequence

ATGTCTGGTTCTGACGGCGTCAACTGCAACAATGGCGCCATTATTGATCATTCTCAGACTAACAACAATGGCGGTTTGGCCGTCAAAAAACCTCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGCCGCCGTATTCGTATGCCGATCATTTGTGCTGCTCGGGTTTTCCAACTTACCCGCGAGTTGGGCCACAAATCCGACGGTCAAACCATCGAGTGGCTTCTCCGTCAAGCGGAGCCTTCGATTATTGCTGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATTTCGGCTTCACTACGCGGTGGTTCTGCTGCTACTTCCTCTCTTGACCATAAGCCGCTTTTGGCTCCGGCGCCGTTCATTCTTGGCAAGCGCGTTAGAACGGACGACGATGGAGATAATAAAGACGACGGTAGCGGTGGCGGTGGCGGTGGTGGTGGCGTTTCGGTTGGCTCTACTGTGAGTTCGTTTATGAGTACGGCTGCCGCGGGTGGATATTGGGCGATTCCTACGAGGCCGGATTTCGGACAGGTGTGGAGCTTTGCAGCAGCAGCGGCGGCGGCTCCGGAGATGGTGATTCAACCAACCGCGGTTTCTCACCCGGCGTCGTTGTTCGTTCAACAGCAATCGATGGGAGAAGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGGCATCTGAATTTGCTTGCTTCTTTATCCGGTGGACCGGGAAGTTCCGGCCGAAGAGACAACGACCACCGTTGA

Coding sequence (CDS)

ATGTCTGGTTCTGACGGCGTCAACTGCAACAATGGCGCCATTATTGATCATTCTCAGACTAACAACAATGGCGGTTTGGCCGTCAAAAAACCTCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGCCGCCGTATTCGTATGCCGATCATTTGTGCTGCTCGGGTTTTCCAACTTACCCGCGAGTTGGGCCACAAATCCGACGGTCAAACCATCGAGTGGCTTCTCCGTCAAGCGGAGCCTTCGATTATTGCTGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATTTCGGCTTCACTACGCGGTGGTTCTGCTGCTACTTCCTCTCTTGACCATAAGCCGCTTTTGGCTCCGGCGCCGTTCATTCTTGGCAAGCGCGTTAGAACGGACGACGATGGAGATAATAAAGACGACGGTAGCGGTGGCGGTGGCGGTGGTGGTGGCGTTTCGGTTGGCTCTACTGTGAGTTCGTTTATGAGTACGGCTGCCGCGGGTGGATATTGGGCGATTCCTACGAGGCCGGATTTCGGACAGGTGTGGAGCTTTGCAGCAGCAGCGGCGGCGGCTCCGGAGATGGTGATTCAACCAACCGCGGTTTCTCACCCGGCGTCGTTGTTCGTTCAACAGCAATCGATGGGAGAAGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGGCATCTGAATTTGCTTGCTTCTTTATCCGGTGGACCGGGAAGTTCCGGCCGAAGAGACAACGACCACCGTTGA

Protein sequence

MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLLAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR

Homology

[Close]

BLAST of Carg01417 vs. NCBI nr
Match: KAG7016601.1 (Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.4 bits (1256), Expect = 3.7e-134
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60
           MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
Sbjct: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60

Query: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL 120
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL 120

Query: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180
           APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF
Sbjct: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180

Query: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240
           GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG
Sbjct: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240

Query: 241 GPGSSGRRDNDHR 254
           GPGSSGRRDNDHR
Sbjct: 241 GPGSSGRRDNDHR 253

[Close]

BLAST of Carg01417 vs. NCBI nr
Match: KAG6579076.1 (Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486.5 bits (1251), Expect = 1.4e-133
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60
           MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
Sbjct: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60

Query: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL 120
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAA SSLDHKPLL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAASSLDHKPLL 120

Query: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180
           APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF
Sbjct: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180

Query: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240
           GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG
Sbjct: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240

Query: 241 GPGSSGRRDNDHR 254
           GPGSSGRRDNDHR
Sbjct: 241 GPGSSGRRDNDHR 253

[Close]

BLAST of Carg01417 vs. NCBI nr
Match: XP_022938451.1 (transcription factor TCP21-like [Cucurbita moschata])

HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-132
Identity = 250/253 (98.81%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60
           MSGSDGVNCNNGAIIDHSQT NNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
Sbjct: 1   MSGSDGVNCNNGAIIDHSQTTNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60

Query: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL 120
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAA SSLDHKPLL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAASSLDHKPLL 120

Query: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180
           APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFM TAAAGGYWAIPTRPDF
Sbjct: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMGTAAAGGYWAIPTRPDF 180

Query: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240
           GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG
Sbjct: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240

Query: 241 GPGSSGRRDNDHR 254
           GPGSSGRRDNDHR
Sbjct: 241 GPGSSGRRDNDHR 253

[Close]

BLAST of Carg01417 vs. NCBI nr
Match: XP_023549520.1 (transcription factor TCP21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.1 bits (1224), Expect = 1.9e-130
Identity = 250/254 (98.43%), Postives = 250/254 (98.43%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60
           MSGSDGVNCNNGAIID SQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
Sbjct: 1   MSGSDGVNCNNGAIIDLSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60

Query: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGS-AATSSLDHKPL 120
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGS AA SSLDHKPL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAAASSLDHKPL 120

Query: 121 LAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPD 180
           LAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFM TAAAGGYWAIPTRPD
Sbjct: 121 LAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMGTAAAGGYWAIPTRPD 180

Query: 181 FGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLS 240
           FGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLS
Sbjct: 181 FGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLS 240

Query: 241 GGPGSSGRRDNDHR 254
           GGPGSSGRRDNDHR
Sbjct: 241 GGPGSSGRRDNDHR 254

[Close]

BLAST of Carg01417 vs. NCBI nr
Match: XP_022993144.1 (transcription factor TCP21-like [Cucurbita maxima])

HSP 1 Score: 462.6 bits (1189), Expect = 2.2e-126
Identity = 245/255 (96.08%), Postives = 245/255 (96.08%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60
           MSGS GVN NNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
Sbjct: 1   MSGSGGVNGNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60

Query: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL 120
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAA SSLDHKPLL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAASSLDHKPLL 120

Query: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180
           APAPFILGKRVR DDDGDNKDDGSGGGG GGGVSVGSTVSSFM TAAAGGYWAIPTRPDF
Sbjct: 121 APAPFILGKRVRADDDGDNKDDGSGGGGVGGGVSVGSTVSSFMGTAAAGGYWAIPTRPDF 180

Query: 181 GQVWSF---AAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLAS 240
           GQVWSF   AAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLAS
Sbjct: 181 GQVWSFAAAAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLAS 240

Query: 241 LSGGPGSSGRRDNDH 253
           LS GPGSSGRRDNDH
Sbjct: 241 LSSGPGSSGRRDNDH 255

[Close]

BLAST of Carg01417 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 6.0e-71
Identity = 159/252 (63.10%), Postives = 181/252 (71.83%), Query Frame = 0


Query: 10  NNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSD 69
           +NGA+I+   +     + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSD
Sbjct: 21  SNGALIEQQPS-----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSD 80

Query: 70  GQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKP---LLAPAPFI 129
           GQTIEWLLRQAEPSIIAATGTGTTPASFST S S+RG + +T SLDHKP   L   +PFI
Sbjct: 81  GQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNST-SLDHKPTSLLGGTSPFI 140

Query: 130 LGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDFGQVWSF 189
           LGKRVR D+D +N  + S         SVG    +F +T A  G+WA+P RPDFGQVWSF
Sbjct: 141 LGKRVRADEDSNNSHNHS---------SVGKD-ETFTTTPA--GFWAVPARPDFGQVWSF 200

Query: 190 AAAAAAAPEMVIQPTAVSHPASLFVQQQ-----SMGEASAAKVGNYLPGHLNLLASLSGG 249
               A AP+ +       H   LFV QQ     +MGEASAA+VGNYLPGHLNLLASLSGG
Sbjct: 201 ----AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGG 250

Query: 250 PGSSGRRDNDHR 254
              S RR+ D R
Sbjct: 261 SPGSDRREEDPR 250

[Close]

BLAST of Carg01417 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.9e-70
Identity = 167/266 (62.78%), Postives = 190/266 (71.43%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQ 60
           M+ +DG   +NG I++  QT+N G L AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQ
Sbjct: 1   MADNDGA-VSNGIIVE--QTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQ 60

Query: 61  LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPL 120
           LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S       TSS      
Sbjct: 61  LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLS-------TSS------ 120

Query: 121 LAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTV-SSFMSTAAAGGYWAIPTRP 180
               PF LGKRV   ++G++      GGGGGGG++VG T+ +S M    +GG+WA+P RP
Sbjct: 121 ----PFTLGKRVVRAEEGES------GGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARP 180

Query: 181 DFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQ-----------SMGEASAAKVGNY 240
           DFGQVWSF  A  A PEMV        PA+LFV+ Q           +MGEASAA+VGNY
Sbjct: 181 DFGQVWSF--ATGAPPEMVF--AQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNY 236

Query: 241 LPG-HLNLLASLSGGPGSSGRRDNDH 253
           LPG HLNLLASLSGG   SGRR++DH
Sbjct: 241 LPGHHLNLLASLSGGANGSGRREDDH 236

[Close]

BLAST of Carg01417 vs. ExPASy Swiss-Prot
Match: Q9C7G4 (Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-30
Identity = 81/143 (56.64%), Postives = 100/143 (69.93%), Query Frame = 0


Query: 2   SGSDGVNCNNGAIIDHSQTNNNGGLAVK---KPPSKDRHSKVDGRGRRIRMPIICAARVF 61
           SG  G N +  A    S ++ +    VK   K P+KDRH+KVDGRGRRIRMP +CAARVF
Sbjct: 30  SGQHG-NISTSATSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVF 89

Query: 62  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR-GGSAATSSLDHK 121
           QLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PA+FST++ASLR GG +   S   K
Sbjct: 90  QLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK 149

Query: 122 PLLAPAPF-ILGKRVRTDDDGDN 140
              +P  F   G  +  D++G N
Sbjct: 150 SSSSPLSFHSTGMSLYEDNNGTN 171

[Close]

BLAST of Carg01417 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30
Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 26  LAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 85
           +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 105 VAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 164

Query: 86  EPSIIAATGTGTTPASFSTISASLRGGSAATSSLDH 117
           EPS+IAATGTGT PA+F++++ SLR   ++ S   H
Sbjct: 165 EPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSH 200

[Close]

BLAST of Carg01417 vs. ExPASy Swiss-Prot
Match: Q9LQF0 (Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-28
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 30  KPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG 89
           K PSKDRH KVDGRGRRIRMP ICAARVFQLTREL HKSDG+TIEWLL+QAEP+IIAATG
Sbjct: 52  KRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAATG 111

Query: 90  TGTTPASFSTISASLRGGSAATSS 114
           TGT PA+ ST++ SLR   +  S+
Sbjct: 112 TGTIPANISTLNISLRSSGSTLSA 135

[Close]

BLAST of Carg01417 vs. ExPASy TrEMBL
Match: A0A6J1FD69 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 9.8e-133
Identity = 250/253 (98.81%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60
           MSGSDGVNCNNGAIIDHSQT NNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
Sbjct: 1   MSGSDGVNCNNGAIIDHSQTTNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60

Query: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL 120
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAA SSLDHKPLL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAASSLDHKPLL 120

Query: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180
           APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFM TAAAGGYWAIPTRPDF
Sbjct: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMGTAAAGGYWAIPTRPDF 180

Query: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240
           GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG
Sbjct: 181 GQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSG 240

Query: 241 GPGSSGRRDNDHR 254
           GPGSSGRRDNDHR
Sbjct: 241 GPGSSGRRDNDHR 253

[Close]

BLAST of Carg01417 vs. ExPASy TrEMBL
Match: A0A6J1JZE2 (transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111489247 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 245/255 (96.08%), Postives = 245/255 (96.08%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60
           MSGS GVN NNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL
Sbjct: 1   MSGSGGVNGNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQL 60

Query: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLL 120
           TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAA SSLDHKPLL
Sbjct: 61  TRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAASSLDHKPLL 120

Query: 121 APAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDF 180
           APAPFILGKRVR DDDGDNKDDGSGGGG GGGVSVGSTVSSFM TAAAGGYWAIPTRPDF
Sbjct: 121 APAPFILGKRVRADDDGDNKDDGSGGGGVGGGVSVGSTVSSFMGTAAAGGYWAIPTRPDF 180

Query: 181 GQVWSF---AAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLAS 240
           GQVWSF   AAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLAS
Sbjct: 181 GQVWSFAAAAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLAS 240

Query: 241 LSGGPGSSGRRDNDH 253
           LS GPGSSGRRDNDH
Sbjct: 241 LSSGPGSSGRRDNDH 255

[Close]

BLAST of Carg01417 vs. ExPASy TrEMBL
Match: A0A6J1E5Y0 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.8e-106
Identity = 218/266 (81.95%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQ-----TNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSGSDGV+ NNGAII HSQ     T NNG L +KKPP+KDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATS--- 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG  AA S   
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120

Query: 121 SLDHKPLLAPAPFILGKRVRTDDDGDNKD-DGSGGG----GGGGGVSVGSTVSSFMSTAA 180
           SLDHKPLL PAPFILGKRVR DDD  +KD DG+GGG    GGGG +SVG +V S M +AA
Sbjct: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180

Query: 181 AGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNY 240
           AGGYWA P RPDFGQVWSF  AAAAAPEMVIQPTA+SH ASLF QQQS+GEASAAKVGNY
Sbjct: 181 AGGYWAFPARPDFGQVWSF--AAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 240

Query: 241 LPGHLNLLASLSGGPGSSGRRDNDHR 254
           LPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 241 LPGHLNLLASLSGGQGSSGRRDNDHR 264

[Close]

BLAST of Carg01417 vs. ExPASy TrEMBL
Match: A0A6J1JUL9 (transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.3e-104
Identity = 213/266 (80.08%), Postives = 225/266 (84.59%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHS----QTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60
           MSGSDGV  NNGAII HS    QT NNG L +KKPP+KDRHSKVDGRGRRIRMPIICAAR
Sbjct: 40  MSGSDGVAHNNGAIIPHSQQSNQTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAAR 99

Query: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRG-----GSAAT 120
           VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG      S++ 
Sbjct: 100 VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPATLSSSSP 159

Query: 121 SSLDHKPLLAPAPFILGKRVRTDDDGDNKDD----GSGGGGGGGGVSVGSTVSSFMSTAA 180
           +SLDHKPLL PAPFILGKRVR DDD  +KD+    G GG GGGG +SVG +V S M +AA
Sbjct: 160 ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGGGGGGGNGGGGAISVGPSVGSIMGSAA 219

Query: 181 AGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNY 240
           AGGYWA P R DFGQVWSF  AAAAAPEMVIQPTA+SH ASLF QQQS+GEASAAKVGNY
Sbjct: 220 AGGYWAFPARSDFGQVWSF--AAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 279

Query: 241 LPGHLNLLASLSGGPGSSGRRDNDHR 254
           LPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 280 LPGHLNLLASLSGGQGSSGRRDNDHR 303

[Close]

BLAST of Carg01417 vs. ExPASy TrEMBL
Match: A0A0A0KMY3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G352090 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 9.5e-104
Identity = 218/268 (81.34%), Postives = 225/268 (83.96%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHS-----------QTNNNGG--LAVKKPPSKDRHSKVDGRGRRI 60
           MS SDGVN NNGAIID S           Q++NN    L VKKPPSKDRHSKVDGRGRRI
Sbjct: 1   MSASDGVNNNNGAIIDPSHQQHRHQIQGNQSSNNAATPLPVKKPPSKDRHSKVDGRGRRI 60

Query: 61  RMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGG 120
           RMPI+CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR  
Sbjct: 61  RMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRTP 120

Query: 121 SAATSSLDHKPLLAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAA 180
            AA+ S DHKPLL PAPFILGKRVRTDDDG NKDD    GG G G+SVG ++ S M  A 
Sbjct: 121 PAASLS-DHKPLLPPAPFILGKRVRTDDDGANKDD---TGGAGAGISVGPSIGSIMGPAV 180

Query: 181 AGGYWAIPTRPDFGQVWSF--AAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVG 240
           AGGYWAIP R DFGQVWSF  AAAAAAAPEMVIQPTAVSH ASLFVQQQSMGEASAAKVG
Sbjct: 181 AGGYWAIPARSDFGQVWSFAAAAAAAAAPEMVIQPTAVSHQASLFVQQQSMGEASAAKVG 240

Query: 241 NYLPGHLNLLASLSGGPGSSGRRDNDHR 254
           NYLPGHLNLLASLSGGPGSSGRRDNDHR
Sbjct: 241 NYLPGHLNLLASLSGGPGSSGRRDNDHR 264

[Close]

BLAST of Carg01417 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 268.9 bits (686), Expect = 4.3e-72
Identity = 159/252 (63.10%), Postives = 181/252 (71.83%), Query Frame = 0


Query: 10  NNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSD 69
           +NGA+I+   +     + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSD
Sbjct: 21  SNGALIEQQPS-----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSD 80

Query: 70  GQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKP---LLAPAPFI 129
           GQTIEWLLRQAEPSIIAATGTGTTPASFST S S+RG + +T SLDHKP   L   +PFI
Sbjct: 81  GQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNST-SLDHKPTSLLGGTSPFI 140

Query: 130 LGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDFGQVWSF 189
           LGKRVR D+D +N  + S         SVG    +F +T A  G+WA+P RPDFGQVWSF
Sbjct: 141 LGKRVRADEDSNNSHNHS---------SVGKD-ETFTTTPA--GFWAVPARPDFGQVWSF 200

Query: 190 AAAAAAAPEMVIQPTAVSHPASLFVQQQ-----SMGEASAAKVGNYLPGHLNLLASLSGG 249
               A AP+ +       H   LFV QQ     +MGEASAA+VGNYLPGHLNLLASLSGG
Sbjct: 201 ----AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGG 250

Query: 250 PGSSGRRDNDHR 254
              S RR+ D R
Sbjct: 261 SPGSDRREEDPR 250

[Close]

BLAST of Carg01417 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 266.2 bits (679), Expect = 2.8e-71
Identity = 167/266 (62.78%), Postives = 190/266 (71.43%), Query Frame = 0


Query: 1   MSGSDGVNCNNGAIIDHSQTNNNGGL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQ 60
           M+ +DG   +NG I++  QT+N G L AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQ
Sbjct: 1   MADNDGA-VSNGIIVE--QTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQ 60

Query: 61  LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPL 120
           LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST S S       TSS      
Sbjct: 61  LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLS-------TSS------ 120

Query: 121 LAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTV-SSFMSTAAAGGYWAIPTRP 180
               PF LGKRV   ++G++      GGGGGGG++VG T+ +S M    +GG+WA+P RP
Sbjct: 121 ----PFTLGKRVVRAEEGES------GGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARP 180

Query: 181 DFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQ-----------SMGEASAAKVGNY 240
           DFGQVWSF  A  A PEMV        PA+LFV+ Q           +MGEASAA+VGNY
Sbjct: 181 DFGQVWSF--ATGAPPEMVF--AQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNY 236

Query: 241 LPG-HLNLLASLSGGPGSSGRRDNDH 253
           LPG HLNLLASLSGG   SGRR++DH
Sbjct: 241 LPGHHLNLLASLSGGANGSGRREDDH 236

[Close]

BLAST of Carg01417 vs. TAIR 10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 135.2 bits (339), Expect = 7.4e-32
Identity = 81/143 (56.64%), Postives = 100/143 (69.93%), Query Frame = 0


Query: 2   SGSDGVNCNNGAIIDHSQTNNNGGLAVK---KPPSKDRHSKVDGRGRRIRMPIICAARVF 61
           SG  G N +  A    S ++ +    VK   K P+KDRH+KVDGRGRRIRMP +CAARVF
Sbjct: 30  SGQHG-NISTSATSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVF 89

Query: 62  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLR-GGSAATSSLDHK 121
           QLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PA+FST++ASLR GG +   S   K
Sbjct: 90  QLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK 149

Query: 122 PLLAPAPF-ILGKRVRTDDDGDN 140
              +P  F   G  +  D++G N
Sbjct: 150 SSSSPLSFHSTGMSLYEDNNGTN 171

[Close]

BLAST of Carg01417 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31
Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 26  LAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 85
           +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 105 VAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 164

Query: 86  EPSIIAATGTGTTPASFSTISASLRGGSAATSSLDH 117
           EPS+IAATGTGT PA+F++++ SLR   ++ S   H
Sbjct: 165 EPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSH 200

[Close]

BLAST of Carg01417 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 128.3 bits (321), Expect = 9.0e-30
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 30  KPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG 89
           K PSKDRH KVDGRGRRIRMP ICAARVFQLTREL HKSDG+TIEWLL+QAEP+IIAATG
Sbjct: 52  KRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAATG 111

Query: 90  TGTTPASFSTISASLRGGSAATSS 114
           TGT PA+ ST++ SLR   +  S+
Sbjct: 112 TGTIPANISTLNISLRSSGSTLSA 135

The following BLAST results are available for this feature:

BLAST of Carg01417 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016601.1	3.7e-134	100.00	Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6579076.1	1.4e-133	99.60	Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022938451.1	2.0e-132	98.81	transcription factor TCP21-like [Cucurbita moschata]	[more]
XP_023549520.1	1.9e-130	98.43	transcription factor TCP21-like [Cucurbita pepo subsp. pepo]	[more]
XP_022993144.1	2.2e-126	96.08	transcription factor TCP21-like [Cucurbita maxima]	[more]

BLAST of Carg01417 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	6.0e-71	63.10	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9FTA2	3.9e-70	62.78	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q9C7G4	1.0e-30	56.64	Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1	[more]
Q93Z00	1.8e-30	68.75	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9LQF0	1.3e-28	76.19	Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1	[more]

BLAST of Carg01417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FD69	9.8e-133	98.81	transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE...	[more]
A0A6J1JZE2	1.0e-126	96.08	transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111489247 PE=4...	[more]
A0A6J1E5Y0	7.8e-106	81.95	transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE...	[more]
A0A6J1JUL9	3.3e-104	80.08	transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4...	[more]
A0A0A0KMY3	9.5e-104	81.34	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G352090 PE=4 SV...	[more]

BLAST of Carg01417 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	4.3e-72	63.10	TCP family transcription factor	[more]
AT5G08330.1	2.8e-71	62.78	TCP family transcription factor	[more]
AT1G72010.1	7.4e-32	56.64	TCP family transcription factor	[more]
AT3G47620.1	1.3e-31	68.75	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G35560.1	9.0e-30	76.19	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 33..119 e-value: 2.5E-32 score: 112.6
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 33..87 score: 28.209229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 1..250
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01417-RA	Carg01417-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding