Carg01370 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01370
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionflowering time control protein FY
LocationCarg_Chr15: 4459753 .. 4461871 (-)
RNA-Seq ExpressionCarg01370
SyntenyCarg01370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTTGTTTTTTACTTCACATATTTTTTATTAGGTTACAATGAGCAAAATCCCGCTGGCTCTGCTCGTATGACTGGTAACTTCGTGGTACCTGATGGACCTACTACTCCTGGACCATTTCCGCCTGGGCTGGCTCGAAACGAGGGAACCATTCCTGGCATTGGAGTTGCAATGCCCTTATCTGATACTGCTGCAATGGGAGAACATAAGCAGCCACATCAAATTTCAATGCCAGTAGGGGCTCCTCCCCTCCCACCTGGTCCACACCCTTCTCTTCTTGCTGCCAATCAGCAGCATTCTTTTCAACAGAACCCTCAGCAGTTCATGCAACAGCAGCAGCAGCAGCAATTACAACACCACCAGAACCAACAAATGGCCCCAGGGCCCATGCAACCTCAAAATTTGCCACACTTACAGCCACCGTCGCATTTCCCTTTGCTCCCACACCCAAATTTACCTCGACCGCCCCAAATGCCCTCGCTGAATATGCCTTCACAACCTGGATCATTGCCTTCACCAGGACCTGCCTCGGTACAAATGCCTATGCCTGGTCCAATGGTATGATCTTTTGCTACTATGTCTATCATTTAATCTTGGTTTTCTTATTATGGGAATTTCTAAATCAACCTGTCAGTGGATAAGTCTAAACATTATCATTCCTATCTCCACAAAGATTCCACAATATAGCACACACCGTTGTAAGCCATAAGAATAGAACGTTTTCACGAAAAAGCGGATGGAGGAGAAAATCCCCGTCCTTGTGATATGATATCACAATCCCCGATCGTTTTAAGTGTTCTTGAGGGTTTTTGGATCCCCAGGTCAACCATGACTGTCCTTGAACGATAACATGCATGAATTGCTGCTTGTTAAGGCTTGTGTAAATGGCATTTTTATTATAATTTCTTTCTCCTTCATCCATGCATAATCCCCTTCTCTGTAGATGCCTGACAACTTGAACTATGCTTATTAGGGGATGCAAGGATCTATGAATCAGATGGGTCCTCCTATGCAACAAAACCATTTTATGGGCATGAATCCAATGCACTCTGGATCTATGCCTACCAGTGGTGCTCCACCTTCTGTTCAAGGTTTTCAGAATAGTTTGCCAAATATGCAAGGCCCATCAAATGCGTCTGGGGCACCGATGTATCCACAGGGCGGTGCATTCAATCGGACACAGGCCGGGCAAATGCCAATGACGCCAGGGTTCAACCCGTACCAGGTATGATTGTAACAGTTATCGTTATCTCTAGCATCATCTTCTGGCTATCAATTTTCCAATATGGAGAAGCTGAATTGCAAACATTAACACCCTTGAGACTGTTGGAATCATATTTGCGTTTCTGTTTATCTACACCCAAAGTCTAGACTGGATTGATCTGCTTCATCCTGACGGGGGATTCAAATCTATTGGCCCAAGCCCACCGTTAGCAGATATTGTCCTCTTTGTCAAGGTTTCTAAAGCATATATGCTAATGAGAGGTTTCCACGTCCTTACAAAAAAATGTTTCATTCTCCTCCTCAATCAATGTGGGATCTCACAATCTACTCCCCTTCGGAGCCCAGCATCCTCGCTGACACTCGTTCCCTTCTCCAGTTGATGTGGGACCTCCCAATCCACCCCTTTCAGGGCCTAGCGTTTTGCTGGCAACCGCCTCGTGTCCACCCCCTTTAGGGCTCAGCCTCCTTGATGGCACATCATCTAGTGTCTGGCTCTAATACCATTTGTAACAATATTACGGTGTTTTGTGGACAGAACTTTGCTAATTAAGCCACCAGATTTCTTAAATGTTTTGCATTGTGTTCTGCAGTTCGGCGGTCAACCCGGGATGCCACCACCGCAACAATCAGGTCCCCCGCCTCATGGCCAGACGCCTCAGTAATCCATGTCAGTTTGCGCCGGAGAAAGAGGGCCCCTTCCCTTTCCTATGTTGTATTCCTTTCAAAACATCTATATGGAGGTGTTGCTGTGAAGATTGGTTTTAGAGGTCTTGAGAGTATTTGCTGCTGACACAAAGAAACAGAACCTTCTCCCACTTCCCTCCCTCAGATTTTAGTTTGTATTTTTATTCTTTTTTATTTTAGTTGATTTAACATTTTAATGATTTTTTTT

mRNA sequence

ATGTCATTTGTTTTTTACTTCACATATTTTTTATTAGGTTACAATGAGCAAAATCCCGCTGGCTCTGCTCGTATGACTGGTAACTTCGTGGTACCTGATGGACCTACTACTCCTGGACCATTTCCGCCTGGGCTGGCTCGAAACGAGGGAACCATTCCTGGCATTGGAGTTGCAATGCCCTTATCTGATACTGCTGCAATGGGAGAACATAAGCAGCCACATCAAATTTCAATGCCAGTAGGGGCTCCTCCCCTCCCACCTGGTCCACACCCTTCTCTTCTTGCTGCCAATCAGCAGCATTCTTTTCAACAGAACCCTCAGCAGTTCATGCAACAGCAGCAGCAGCAGCAATTACAACACCACCAGAACCAACAAATGGCCCCAGGGCCCATGCAACCTCAAAATTTGCCACACTTACAGCCACCGTCGCATTTCCCTTTGCTCCCACACCCAAATTTACCTCGACCGCCCCAAATGCCCTCGCTGAATATGCCTTCACAACCTGGATCATTGCCTTCACCAGGACCTGCCTCGGTACAAATGCCTATGCCTGGTCCAATGGGGATGCAAGGATCTATGAATCAGATGGGTCCTCCTATGCAACAAAACCATTTTATGGGCATGAATCCAATGCACTCTGGATCTATGCCTACCAGTGGTGCTCCACCTTCTGTTCAAGGTTTTCAGAATAGTTTGCCAAATATGCAAGGCCCATCAAATGCGTCTGGGGCACCGATGTATCCACAGGGCGGTGCATTCAATCGGACACAGGCCGGGCAAATGCCAATGACGCCAGGGTTCAACCCGTACCAGTTCGGCGGTCAACCCGGGATGCCACCACCGCAACAATCAGGTCCCCCGCCTCATGGCCAGACGCCTCAGTAATCCATGTCAGTTTGCGCCGGAGAAAGAGGGCCCCTTCCCTTTCCTATGTTGTATTCCTTTCAAAACATCTATATGGAGGTGTTGCTGTGAAGATTGGTTTTAGAGGTCTTGAGAGTATTTGCTGCTGACACAAAGAAACAGAACCTTCTCCCACTTCCCTCCCTCAGATTTTAGTTTGTATTTTTATTCTTTTTTATTTTAGTTGATTTAACATTTTAATGATTTTTTTT

Coding sequence (CDS)

ATGTCATTTGTTTTTTACTTCACATATTTTTTATTAGGTTACAATGAGCAAAATCCCGCTGGCTCTGCTCGTATGACTGGTAACTTCGTGGTACCTGATGGACCTACTACTCCTGGACCATTTCCGCCTGGGCTGGCTCGAAACGAGGGAACCATTCCTGGCATTGGAGTTGCAATGCCCTTATCTGATACTGCTGCAATGGGAGAACATAAGCAGCCACATCAAATTTCAATGCCAGTAGGGGCTCCTCCCCTCCCACCTGGTCCACACCCTTCTCTTCTTGCTGCCAATCAGCAGCATTCTTTTCAACAGAACCCTCAGCAGTTCATGCAACAGCAGCAGCAGCAGCAATTACAACACCACCAGAACCAACAAATGGCCCCAGGGCCCATGCAACCTCAAAATTTGCCACACTTACAGCCACCGTCGCATTTCCCTTTGCTCCCACACCCAAATTTACCTCGACCGCCCCAAATGCCCTCGCTGAATATGCCTTCACAACCTGGATCATTGCCTTCACCAGGACCTGCCTCGGTACAAATGCCTATGCCTGGTCCAATGGGGATGCAAGGATCTATGAATCAGATGGGTCCTCCTATGCAACAAAACCATTTTATGGGCATGAATCCAATGCACTCTGGATCTATGCCTACCAGTGGTGCTCCACCTTCTGTTCAAGGTTTTCAGAATAGTTTGCCAAATATGCAAGGCCCATCAAATGCGTCTGGGGCACCGATGTATCCACAGGGCGGTGCATTCAATCGGACACAGGCCGGGCAAATGCCAATGACGCCAGGGTTCAACCCGTACCAGTTCGGCGGTCAACCCGGGATGCCACCACCGCAACAATCAGGTCCCCCGCCTCATGGCCAGACGCCTCAGTAA

Protein sequence

MSFVFYFTYFLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGEHKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPGPMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGMQGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQGGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ
Homology
BLAST of Carg01370 vs. NCBI nr
Match: KAG7016648.1 (Flowering time control protein FY, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 581.3 bits (1497), Expect = 4.8e-162
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0

Query: 1   MSFVFYFTYFLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMP 60
           MSFVFYFTYFLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMP
Sbjct: 1   MSFVFYFTYFLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMP 60

Query: 61  LSDTAAMGEHKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQH 120
           LSDTAAMGEHKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQH
Sbjct: 61  LSDTAAMGEHKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQH 120

Query: 121 HQNQQMAPGPMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQ 180
           HQNQQMAPGPMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQ
Sbjct: 121 HQNQQMAPGPMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQ 180

Query: 181 MPMPGPMGMQGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSN 240
           MPMPGPMGMQGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSN
Sbjct: 181 MPMPGPMGMQGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSN 240

Query: 241 ASGAPMYPQGGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           ASGAPMYPQGGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ
Sbjct: 241 ASGAPMYPQGGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 294

BLAST of Carg01370 vs. NCBI nr
Match: XP_022938944.1 (flowering time control protein FY-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 343 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 402

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 403 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 462

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 463 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 522

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 523 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 582

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ
Sbjct: 583 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 627

BLAST of Carg01370 vs. NCBI nr
Match: KAG6579125.1 (Flowering time control protein FY, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 443 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 502

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 503 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 562

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 563 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 622

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 623 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 682

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ
Sbjct: 683 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 727

BLAST of Carg01370 vs. NCBI nr
Match: XP_022938942.1 (flowering time control protein FY-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 446 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 505

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 506 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 565

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 566 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 625

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 626 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 685

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ
Sbjct: 686 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 730

BLAST of Carg01370 vs. NCBI nr
Match: XP_022993789.1 (flowering time control protein FY isoform X2 [Cucurbita maxima])

HSP 1 Score: 558.1 bits (1437), Expect = 4.4e-155
Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 343 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 402

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 403 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 462

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 463 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 522

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 523 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 582

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQ+GPPPHGQTPQ
Sbjct: 583 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQAGPPPHGQTPQ 627

BLAST of Carg01370 vs. ExPASy Swiss-Prot
Match: Q6NLV4 (Flowering time control protein FY OS=Arabidopsis thaliana OX=3702 GN=FY PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.8e-38
Identity = 136/282 (48.23%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 13  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGEHKQ 72
           GYNEQ   G  R   NF   +    PG F PGL RNEGTIPGIG+AMP  D ++ G+HKQ
Sbjct: 422 GYNEQ---GFGRQPDNFQPSEASPIPGAFVPGLTRNEGTIPGIGIAMPF-DASSQGDHKQ 481

Query: 73  PHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPGPMQ 132
           P   SM +GAPPLPPGPHPSLL + QQ  +          QQQQQ Q H  QQM P P  
Sbjct: 482 PLPGSMALGAPPLPPGPHPSLLGSGQQQGY----------QQQQQHQGHP-QQMLPMP-- 541

Query: 133 PQNLPH--LQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPG-PASVQMPMPGPMGM 192
             N+PH  L P SH PL PH +LPRP QMP        G +P P  P S Q  MPG MGM
Sbjct: 542 --NMPHHQLPPSSHMPLHPH-HLPRPMQMP------PHGHMPPPSMPMSHQ--MPGSMGM 601

Query: 193 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 252
           QG MN   P M Q+HFM             GAP  V          QG  N+ G  MYPQ
Sbjct: 602 QGGMN---PQMSQSHFM-------------GAPSGV---------FQGQPNSGGPQMYPQ 641

Query: 253 G-GAFNRTQAGQMPMTPGF-NPYQFGGQPGMPPPQQSGPPPH 290
           G G FNR Q     M PG+ NP+Q   QP +PP    GPPP+
Sbjct: 662 GRGGFNRPQ-----MIPGYNNPFQQQQQPPLPP----GPPPN 641

BLAST of Carg01370 vs. ExPASy TrEMBL
Match: A0A6J1FFL2 (flowering time control protein FY-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445002 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.6e-156
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 343 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 402

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 403 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 462

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 463 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 522

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 523 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 582

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ
Sbjct: 583 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 627

BLAST of Carg01370 vs. ExPASy TrEMBL
Match: A0A6J1FFG6 (flowering time control protein FY-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445002 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.6e-156
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 446 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 505

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 506 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 565

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 566 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 625

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 626 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 685

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ
Sbjct: 686 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 730

BLAST of Carg01370 vs. ExPASy TrEMBL
Match: A0A6J1K152 (flowering time control protein FY isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489693 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.1e-155
Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 343 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 402

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 403 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 462

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 463 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 522

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 523 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 582

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQ+GPPPHGQTPQ
Sbjct: 583 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQAGPPPHGQTPQ 627

BLAST of Carg01370 vs. ExPASy TrEMBL
Match: A0A6J1K3B2 (flowering time control protein FY isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489693 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.1e-155
Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE
Sbjct: 442 FSTGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 501

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG
Sbjct: 502 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 561

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM
Sbjct: 562 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 621

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ
Sbjct: 622 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 681

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQ+GPPPHGQTPQ
Sbjct: 682 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQAGPPPHGQTPQ 726

BLAST of Carg01370 vs. ExPASy TrEMBL
Match: A0A6J1CX97 (flowering time control protein FY OS=Momordica charantia OX=3673 GN=LOC111015660 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.1e-143
Identity = 265/285 (92.98%), Postives = 270/285 (94.74%), Query Frame = 0

Query: 10  FLLGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGE 69
           F  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARN+GTIPGIGVAMPLSDTAAMGE
Sbjct: 447 FSSGYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNDGTIPGIGVAMPLSDTAAMGE 506

Query: 70  HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPG 129
           HKQPHQISMPVGAPPLPPGPHPSLLAANQQHS+QQNPQQF+QQQQQQ  QHHQ QQMAP 
Sbjct: 507 HKQPHQISMPVGAPPLPPGPHPSLLAANQQHSYQQNPQQFLQQQQQQS-QHHQTQQMAPV 566

Query: 130 PMQPQNLPHLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPGPASVQMPMPGPMGM 189
           PMQPQNLP LQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPS GP+SV MPMPGPMGM
Sbjct: 567 PMQPQNLPQLQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSSGPSSVPMPMPGPMGM 626

Query: 190 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 249
           QGSMNQM PPM QNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGP+NASGAPMYPQ
Sbjct: 627 QGSMNQMVPPMPQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPANASGAPMYPQ 686

Query: 250 GGAFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQQSGPPPHGQTPQ 295
           GG FNRTQAGQMPMTPGFNPYQFGGQPGMPPPQ  GPPPHGQ PQ
Sbjct: 687 GGGFNRTQAGQMPMTPGFNPYQFGGQPGMPPPQPPGPPPHGQKPQ 730

BLAST of Carg01370 vs. TAIR 10
Match: AT5G13480.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.5e-39
Identity = 136/282 (48.23%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 13  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGEHKQ 72
           GYNEQ   G  R   NF   +    PG F PGL RNEGTIPGIG+AMP  D ++ G+HKQ
Sbjct: 422 GYNEQ---GFGRQPDNFQPSEASPIPGAFVPGLTRNEGTIPGIGIAMPF-DASSQGDHKQ 481

Query: 73  PHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPGPMQ 132
           P   SM +GAPPLPPGPHPSLL + QQ  +          QQQQQ Q H  QQM P P  
Sbjct: 482 PLPGSMALGAPPLPPGPHPSLLGSGQQQGY----------QQQQQHQGHP-QQMLPMP-- 541

Query: 133 PQNLPH--LQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPG-PASVQMPMPGPMGM 192
             N+PH  L P SH PL PH +LPRP QMP        G +P P  P S Q  MPG MGM
Sbjct: 542 --NMPHHQLPPSSHMPLHPH-HLPRPMQMP------PHGHMPPPSMPMSHQ--MPGSMGM 601

Query: 193 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 252
           QG MN   P M Q+HFM             GAP  V          QG  N+ G  MYPQ
Sbjct: 602 QGGMN---PQMSQSHFM-------------GAPSGV---------FQGQPNSGGPQMYPQ 641

Query: 253 G-GAFNRTQAGQMPMTPGF-NPYQFGGQPGMPPPQQSGPPPH 290
           G G FNR Q     M PG+ NP+Q   QP +PP    GPPP+
Sbjct: 662 GRGGFNRPQ-----MIPGYNNPFQQQQQPPLPP----GPPPN 641

BLAST of Carg01370 vs. TAIR 10
Match: AT5G13480.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.5e-39
Identity = 136/282 (48.23%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 13  GYNEQNPAGSARMTGNFVVPDGPTTPGPFPPGLARNEGTIPGIGVAMPLSDTAAMGEHKQ 72
           GYNEQ   G  R   NF   +    PG F PGL RNEGTIPGIG+AMP  D ++ G+HKQ
Sbjct: 428 GYNEQ---GFGRQPDNFQPSEASPIPGAFVPGLTRNEGTIPGIGIAMPF-DASSQGDHKQ 487

Query: 73  PHQISMPVGAPPLPPGPHPSLLAANQQHSFQQNPQQFMQQQQQQQLQHHQNQQMAPGPMQ 132
           P   SM +GAPPLPPGPHPSLL + QQ  +          QQQQQ Q H  QQM P P  
Sbjct: 488 PLPGSMALGAPPLPPGPHPSLLGSGQQQGY----------QQQQQHQGHP-QQMLPMP-- 547

Query: 133 PQNLPH--LQPPSHFPLLPHPNLPRPPQMPSLNMPSQPGSLPSPG-PASVQMPMPGPMGM 192
             N+PH  L P SH PL PH +LPRP QMP        G +P P  P S Q  MPG MGM
Sbjct: 548 --NMPHHQLPPSSHMPLHPH-HLPRPMQMP------PHGHMPPPSMPMSHQ--MPGSMGM 607

Query: 193 QGSMNQMGPPMQQNHFMGMNPMHSGSMPTSGAPPSVQGFQNSLPNMQGPSNASGAPMYPQ 252
           QG MN   P M Q+HFM             GAP  V          QG  N+ G  MYPQ
Sbjct: 608 QGGMN---PQMSQSHFM-------------GAPSGV---------FQGQPNSGGPQMYPQ 647

Query: 253 G-GAFNRTQAGQMPMTPGF-NPYQFGGQPGMPPPQQSGPPPH 290
           G G FNR Q     M PG+ NP+Q   QP +PP    GPPP+
Sbjct: 668 GRGGFNRPQ-----MIPGYNNPFQQQQQPPLPP----GPPPN 647

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7016648.14.8e-162100.00Flowering time control protein FY, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022938944.12.0e-15599.30flowering time control protein FY-like isoform X2 [Cucurbita moschata][more]
KAG6579125.12.0e-15599.30Flowering time control protein FY, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022938942.12.0e-15599.30flowering time control protein FY-like isoform X1 [Cucurbita moschata][more]
XP_022993789.14.4e-15598.95flowering time control protein FY isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q6NLV47.8e-3848.23Flowering time control protein FY OS=Arabidopsis thaliana OX=3702 GN=FY PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1FFL29.6e-15699.30flowering time control protein FY-like isoform X2 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1FFG69.6e-15699.30flowering time control protein FY-like isoform X1 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1K1522.1e-15598.95flowering time control protein FY isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1K3B22.1e-15598.95flowering time control protein FY isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1CX977.1e-14392.98flowering time control protein FY OS=Momordica charantia OX=3673 GN=LOC111015660... [more]
Match NameE-valueIdentityDescription
AT5G13480.15.5e-3948.23Transducin/WD40 repeat-like superfamily protein [more]
AT5G13480.25.5e-3948.23Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..179
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 13..290

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01370-RACarg01370-RAmRNA