Carg01356 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01356
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dehydrogenase/reductase SDR family member on chromosome X-like
Location	Carg_Chr15: 4539685 .. 4540937 (+)
RNA-Seq Expression	Carg01356
Synteny	Carg01356

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATGAAAACAGAGTTGAAAAAAGCTTGGCAGTTTTTAAGATCAACAGAGTTTTGGAGGATGGCAGTGCTGTGGAATCTCTCCATCCTCTATTCTTACTTGCTGCTATTTTTTCAAAGATTTCTCTCTTTGTCTATTAAGCACAGATCTGGAACCTCCTACTCCTATGAAAGGGCTTCTTCTTGCACCTCAGAAGACGTCGTGCCCCTTTGCGTTATCACCGGTGTAAAGTTGCCTGTGACTTTTAGGCTTGATTGAAGTTAAATTTGAGTCTCTCTTTCTTTCTCTGCACGTACAGCTTTTAATTCATTTAGTATCTTTGTTTTGAAAGTTGTAGGCTACCTCTGGATTGGGTGCAGCTGCTGCTCTTGCTCTTTCTAAACGTGGTTTCTACGTCGTTCTTGGTTGGTTTCTCGTACCATTTCATTCATTTTCTCAACTTCTATTGCAGTCTTGATTTTGATTTACCATTTGAATCTAGCTGTTAGAAATTAATGCTCATTGCAAATATTATTGGACCCTGTCTTCATTTCCAAAACATTATGTGGATTATAATGCTCCCAATTCTCATTGTTTACCTTCAAACTATTACTGCCTCTTACTCACAAAACGACTTCTGATAGAGTGCCGATAATCTTTTCATTAAGTGCATGAATTTATTCAACGTATTTACCAGTAATAAGACTCTGTTTTTAATTTTTAAGCTCTTATTCTAATGATGGAAAAACAACTTAACTAAACCCTTCTTGATGCCATTTCCTTTGCATTAAATGTTATGCAAGCCAATCAAATCTTTCTCTACAAAATAACAGAGTTAAAAACTGATGCTTGTGTTCTTAAATTTTATTTTGTTCTTGCAGCTGGACGGTCAAGGCATTTGTTATTAAAGGTTTGCCTCATGCACTGTTTTTTAGTTTGTTTTATCCCTACCTCATTTCATGTGTTATTCCTCGTTTTGGTGACTGCTTACATTGTCGCAGACAATGTCAGAGATAAAAAGGCAGAATGAAAAAGCCCTTCTTAAAGCTTTTCAAGTCGATCTTTTATCTGTTCGGTCAATCTTGGACTTCAAGAATTCCTTTCAGCTTTGGCTCCAAGGCTCTAAGATGCATCCTTCATTGCAACTTTTGATTAATAATGCCGGGATATTGGCAACGTCATCTAGATCCACTTCTGAAGGCTATGACCAGTTACATCTCTATTCCCTGTCTTTCTTCAAGTGTTTTAGTCTTGCAATAATGCAGTGA

mRNA sequence

ATGGCTTCCATGAAAACAGAGTTGAAAAAAGCTTGGCAGTTTTTAAGATCAACAGAGTTTTGGAGGATGGCAGTGCTGTGGAATCTCTCCATCCTCTATTCTTACTTGCTGCTATTTTTTCAAAGATTTCTCTCTTTGTCTATTAAGCACAGATCTGGAACCTCCTACTCCTATGAAAGGGCTTCTTCTTGCACCTCAGAAGACGTCGTGCCCCTTTGCGTTATCACCGGTGTAAAGTTGCCTGCTACCTCTGGATTGGGTGCAGCTGCTGCTCTTGCTCTTTCTAAACGTGGTTTCTACGTCGTTCTTGCTGGACGGTCAAGGCATTTGTTATTAAAGACAATGTCAGAGATAAAAAGGCAGAATGAAAAAGCCCTTCTTAAAGCTTTTCAAGTCGATCTTTTATCTGTTCGGTCAATCTTGGACTTCAAGAATTCCTTTCAGCTTTGGCTCCAAGGCTCTAAGATGCATCCTTCATTGCAACTTTTGATTAATAATGCCGGGATATTGGCAACGTCATCTAGATCCACTTCTGAAGGCTATGACCAGTTACATCTCTATTCCCTGTCTTTCTTCAAGTGTTTTAGTCTTGCAATAATGCAGTGA

Coding sequence (CDS)

ATGGCTTCCATGAAAACAGAGTTGAAAAAAGCTTGGCAGTTTTTAAGATCAACAGAGTTTTGGAGGATGGCAGTGCTGTGGAATCTCTCCATCCTCTATTCTTACTTGCTGCTATTTTTTCAAAGATTTCTCTCTTTGTCTATTAAGCACAGATCTGGAACCTCCTACTCCTATGAAAGGGCTTCTTCTTGCACCTCAGAAGACGTCGTGCCCCTTTGCGTTATCACCGGTGTAAAGTTGCCTGCTACCTCTGGATTGGGTGCAGCTGCTGCTCTTGCTCTTTCTAAACGTGGTTTCTACGTCGTTCTTGCTGGACGGTCAAGGCATTTGTTATTAAAGACAATGTCAGAGATAAAAAGGCAGAATGAAAAAGCCCTTCTTAAAGCTTTTCAAGTCGATCTTTTATCTGTTCGGTCAATCTTGGACTTCAAGAATTCCTTTCAGCTTTGGCTCCAAGGCTCTAAGATGCATCCTTCATTGCAACTTTTGATTAATAATGCCGGGATATTGGCAACGTCATCTAGATCCACTTCTGAAGGCTATGACCAGTTACATCTCTATTCCCTGTCTTTCTTCAAGTGTTTTAGTCTTGCAATAATGCAGTGA

Protein sequence

MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYERASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEGYDQLHLYSLSFFKCFSLAIMQ

Homology

[Close]

BLAST of Carg01356 vs. NCBI nr
Match: KAG7016662.1 (Dehydrogenase/reductase SDR family member on chromosome X, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382.5 bits (981), Expect = 2.3e-102
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER
Sbjct: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
           ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR
Sbjct: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG
Sbjct: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180

Query: 181 YDQLHLYSLSFFKCFSLAIMQ 202
           YDQLHLYSLSFFKCFSLAIMQ
Sbjct: 181 YDQLHLYSLSFFKCFSLAIMQ 201

[Close]

BLAST of Carg01356 vs. NCBI nr
Match: KAG6579145.1 (Dehydrogenase/reductase SDR family member on chromosome X, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 178/184 (96.74%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER
Sbjct: 35  MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 94

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
           ASSCTSEDVVPLCVITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR
Sbjct: 95  ASSCTSEDVVPLCVITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 154

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLSV+SILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG
Sbjct: 155 QNEKALLKAFQVDLLSVQSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 214

Query: 181 YDQL 185
           YDQ+
Sbjct: 215 YDQM 214

[Close]

BLAST of Carg01356 vs. NCBI nr
Match: XP_023551555.1 (dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 176/184 (95.65%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYL+LFFQRFLSLSIKHRSGTSYSYER
Sbjct: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLMLFFQRFLSLSIKHRSGTSYSYER 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
           ASSCTSEDVVPLCVITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR
Sbjct: 61  ASSCTSEDVVPLCVITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLL V+SILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG
Sbjct: 121 QNEKALLKAFQVDLLYVQSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180

Query: 181 YDQL 185
           YDQ+
Sbjct: 181 YDQM 180

[Close]

BLAST of Carg01356 vs. NCBI nr
Match: XP_022939811.1 (dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 9.5e-85
Identity = 174/184 (94.57%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MASMKTELKKAWQFLRSTEFWRMAVLWNLSI YSYLLLFFQRFLSLSIKHRSGTSYSYER
Sbjct: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSIFYSYLLLFFQRFLSLSIKHRSGTSYSYER 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
           ASS TSEDVVPLCVITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLLL+TMSEIKR
Sbjct: 61  ASSYTSEDVVPLCVITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLLQTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLSV+SILDFKNS QLWLQGSKMHPSLQLLINNAGILATSSRSTSEG
Sbjct: 121 QNEKALLKAFQVDLLSVQSILDFKNSLQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180

Query: 181 YDQL 185
           YDQ+
Sbjct: 181 YDQM 180

[Close]

BLAST of Carg01356 vs. NCBI nr
Match: XP_022993465.1 (dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita maxima])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 172/184 (93.48%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MASMKTELKK WQFLRSTEFWRMAVLWNLSILYSYL+LFF+RFLSLSIKHR GTSYSYER
Sbjct: 1   MASMKTELKKVWQFLRSTEFWRMAVLWNLSILYSYLVLFFERFLSLSIKHRPGTSYSYER 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
           ASS TSEDVVPLCVITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR
Sbjct: 61  ASSYTSEDVVPLCVITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLSV+SILDFKNS QLWLQGSKMHPSLQLLINNAGILATSSRSTSEG
Sbjct: 121 QNEKALLKAFQVDLLSVQSILDFKNSLQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180

Query: 181 YDQL 185
           YDQ+
Sbjct: 181 YDQM 180

[Close]

BLAST of Carg01356 vs. ExPASy Swiss-Prot
Match: O74959 (Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC736.13 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.9e-05
Identity = 33/118 (27.97%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 65  TSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEK 124
           T  D+  L     +   ++ G+G   AL L+++G  V LAGR+     K M +I  +   
Sbjct: 33  TFNDIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRH 92

Query: 125 ALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEGYD 183
           + ++  ++DLL   S+     SF            L +L+NNAGI+      T +GY+
Sbjct: 93  SKIRFLRLDLLDFESVYQAAESF------IAKEEKLHILVNNAGIMNPPFELTKDGYE 144

[Close]

BLAST of Carg01356 vs. ExPASy Swiss-Prot
Match: Q9ZAU1 (Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius OX=1950 GN=dnrU PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-04
Identity = 32/101 (31.68%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 82  ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEKALLKAFQVDLLSVRSIL 141
           ATSG+G AAALA++++G  VVL GR    L    +E+ R    A   AF+ D   +R + 
Sbjct: 25  ATSGIGRAAALAVARQGARVVLVGRDPERLRTVTNEVARTAGPA-PDAFRADFAELRQVR 84

Query: 142 DFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEGYD 183
           D     +        +P + ++ +NAG +  S  +T +G++
Sbjct: 85  DLGERLR------DRYPRIDVMASNAGGMFWSRTTTQDGFE 118

[Close]

BLAST of Carg01356 vs. ExPASy Swiss-Prot
Match: Q53877 (Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) OX=45212 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.0e-04
Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 74  VITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEKALLKAFQVD 133
           +ITG    ATSG+G AAALA++++G  VVL GR    L    +E+ R    A   AF+ D
Sbjct: 21  LITG----ATSGIGRAAALAIARQGARVVLVGRDPERLRTVTNEVARTAGPA-PDAFRAD 80

Query: 134 LLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEGYD 183
              +R + +     +        +P + ++  NAG +  S  +T +G++
Sbjct: 81  FAELRQVRELGERLR------DRYPRIDVMAGNAGGMFWSRTTTQDGFE 118

[Close]

BLAST of Carg01356 vs. ExPASy TrEMBL
Match: A0A6J1FGW7 (dehydrogenase/reductase SDR family member on chromosome X-like OS=Cucurbita moschata OX=3662 GN=LOC111445574 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.6e-85
Identity = 174/184 (94.57%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MASMKTELKKAWQFLRSTEFWRMAVLWNLSI YSYLLLFFQRFLSLSIKHRSGTSYSYER
Sbjct: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSIFYSYLLLFFQRFLSLSIKHRSGTSYSYER 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
           ASS TSEDVVPLCVITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLLL+TMSEIKR
Sbjct: 61  ASSYTSEDVVPLCVITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLLQTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLSV+SILDFKNS QLWLQGSKMHPSLQLLINNAGILATSSRSTSEG
Sbjct: 121 QNEKALLKAFQVDLLSVQSILDFKNSLQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180

Query: 181 YDQL 185
           YDQ+
Sbjct: 181 YDQM 180

[Close]

BLAST of Carg01356 vs. ExPASy TrEMBL
Match: A0A6J1JYL2 (dehydrogenase/reductase SDR family member on chromosome X-like OS=Cucurbita maxima OX=3661 GN=LOC111489467 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84
Identity = 172/184 (93.48%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MASMKTELKK WQFLRSTEFWRMAVLWNLSILYSYL+LFF+RFLSLSIKHR GTSYSYER
Sbjct: 1   MASMKTELKKVWQFLRSTEFWRMAVLWNLSILYSYLVLFFERFLSLSIKHRPGTSYSYER 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
           ASS TSEDVVPLCVITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR
Sbjct: 61  ASSYTSEDVVPLCVITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLSV+SILDFKNS QLWLQGSKMHPSLQLLINNAGILATSSRSTSEG
Sbjct: 121 QNEKALLKAFQVDLLSVQSILDFKNSLQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180

Query: 181 YDQL 185
           YDQ+
Sbjct: 181 YDQM 180

[Close]

BLAST of Carg01356 vs. ExPASy TrEMBL
Match: A0A1S4DT43 (dehydrogenase/reductase SDR family member on chromosome X-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503643 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.7e-77
Identity = 158/184 (85.87%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           M SMKTELKKAWQF+RSTEFWRMAVLWNLSILYSYLLLF QRFLS SI HRS   YSYER
Sbjct: 1   MGSMKTELKKAWQFIRSTEFWRMAVLWNLSILYSYLLLFSQRFLSFSINHRSEIYYSYER 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
            S CTSE V+PLC+ITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLL+KTMSEIKR
Sbjct: 61  DSPCTSEAVMPLCIITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLMKTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLS++SILDFKNS QLWLQ SKMHPS+QLL+NNAGILATSSR TSEG
Sbjct: 121 QNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLVNNAGILATSSRLTSEG 180

Query: 181 YDQL 185
           YDQ+
Sbjct: 181 YDQM 180

[Close]

BLAST of Carg01356 vs. ExPASy TrEMBL
Match: A0A6J1CZD5 (dehydrogenase/reductase SDR family member on chromosome X-like OS=Momordica charantia OX=3673 GN=LOC111015588 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.9e-71
Identity = 150/184 (81.52%), Postives = 160/184 (86.96%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           MA MK ELKKAWQFLRS EFWRMAVLWNLSILYSYLLLF + FL  SI HRS T+YS + 
Sbjct: 1   MAGMKEELKKAWQFLRSIEFWRMAVLWNLSILYSYLLLFSRSFLYFSINHRSETNYSDKS 60

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
            S CTSE + PLC+ITG    ATSGLGAAAALALSKRGFYVVLAGRS HLLLKTMSEIKR
Sbjct: 61  VSPCTSEAITPLCIITG----ATSGLGAAAALALSKRGFYVVLAGRSGHLLLKTMSEIKR 120

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNE ALLKAFQVDLLS++SIL+FKNS QLWLQ SKMHPS+QLLINNAGILATSSR TSEG
Sbjct: 121 QNEDALLKAFQVDLLSIQSILNFKNSLQLWLQDSKMHPSVQLLINNAGILATSSRITSEG 180

Query: 181 YDQL 185
           YDQ+
Sbjct: 181 YDQM 180

[Close]

BLAST of Carg01356 vs. ExPASy TrEMBL
Match: A0A5A7U2W8 (Dehydrogenase/reductase SDR family member on chromosome X-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00330 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.4e-54
Identity = 126/184 (68.48%), Postives = 136/184 (73.91%), Query Frame = 0


Query: 1   MASMKTELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYER 60
           M SMKTELKKAWQF+RS  +                                   YSYER
Sbjct: 12  MGSMKTELKKAWQFIRSEIY-----------------------------------YSYER 71

Query: 61  ASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKR 120
            S CTSE V+PLC+ITG    ATSGLGAAAALALSKRGFYVVLAGRSRHLL+KTMSEIKR
Sbjct: 72  DSPCTSEAVMPLCIITG----ATSGLGAAAALALSKRGFYVVLAGRSRHLLMKTMSEIKR 131

Query: 121 QNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEG 180
           QNEKALLKAFQVDLLS++SILDFKNS QLWLQ SKMHPS+QLL+NNAGILATSSR TSEG
Sbjct: 132 QNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLVNNAGILATSSRLTSEG 156

Query: 181 YDQL 185
           YDQ+
Sbjct: 192 YDQM 156

[Close]

BLAST of Carg01356 vs. TAIR 10
Match: AT5G04070.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-39
Identity = 97/192 (50.52%), Postives = 131/192 (68.23%), Query Frame = 0


Query: 8   LKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYERASSCT-- 67
           LK+A +F+ S+ FWRM + WN+++L+SY  L     L  SI     +S     +SSC+  
Sbjct: 4   LKEALRFICSSNFWRMVLFWNIALLFSYFQL-----LKKSIFAPKSSS-----SSSCSKF 63

Query: 68  SEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEKA 127
           +    P+CVITG    ATSGLG A A ALS++GFYVVL GRS HLL KT+S+IKRQNE A
Sbjct: 64  NHSHTPVCVITG----ATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNEDA 123

Query: 128 LLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEGYDQLH 187
            LKAF+VD+ S + +L F++S + WL  S +H S+QLL+NNAGILATSSR T EG+D+  
Sbjct: 124 KLKAFEVDMSSFQLVLKFRSSLEQWLFESDLHSSVQLLVNNAGILATSSRPTVEGFDR-- 179

Query: 188 LYSLSFFKCFSL 198
           + + ++   FSL
Sbjct: 184 MIATNYVGAFSL 179

[Close]

BLAST of Carg01356 vs. TAIR 10
Match: AT5G15940.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36
Identity = 87/178 (48.88%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 7   ELKKAWQFLRSTEFWRMAVLWNLSILYSYLLLFFQRFLSLSIKHRSGTSYSYERASSCTS 66
           E+K+   F+ S+EFWRM + WN++++ SY  L   R         SG S + +  SS   
Sbjct: 3   EVKEVLCFVCSSEFWRMVLFWNIALVSSYFQLLKARIFGSKSTSISG-SINPQNGSS--- 62

Query: 67  EDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEKAL 126
               P+CVITG    ATSGLG A A AL+++GFYVVL GRS  LL +T+ EIK +N+ A 
Sbjct: 63  ---RPICVITG----ATSGLGKATAFALAEKGFYVVLVGRSSQLLSETLKEIKNKNKDAQ 122

Query: 127 LKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEGYDQL 185
           LK+F+ D+ S  SI  FKNS + WL  S +HPS+Q+L+NNAGILATSSR T +GYD++
Sbjct: 123 LKSFEADMSSFESIFTFKNSLEQWLSDSALHPSIQVLVNNAGILATSSRPTIDGYDRM 169

[Close]

BLAST of Carg01356 vs. TAIR 10
Match: AT5G50130.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 38/123 (30.89%), Postives = 56/123 (45.53%), Query Frame = 0


Query: 57  SYERASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMS 116
           S   A   T     P   +T +    TSG+GA  A  L+KRG  VV+A R          
Sbjct: 19  SRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKE 78

Query: 117 EIKRQNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRS 176
            I R+N +A +  F++DL S+ S+  F + F            L +LINNAG+ + +   
Sbjct: 79  RIIRENPEADIILFEIDLSSLSSVARFCSQF------LSQDLPLNILINNAGVFSPNLEF 135

Query: 177 TSE 180
           + E
Sbjct: 139 SEE 135

[Close]

BLAST of Carg01356 vs. TAIR 10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 38/123 (30.89%), Postives = 56/123 (45.53%), Query Frame = 0


Query: 57  SYERASSCTSEDVVPLCVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMS 116
           S   A   T     P   +T +    TSG+GA  A  L+KRG  VV+A R          
Sbjct: 19  SRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKE 78

Query: 117 EIKRQNEKALLKAFQVDLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRS 176
            I R+N +A +  F++DL S+ S+  F + F            L +LINNAG+ + +   
Sbjct: 79  RIIRENPEADIILFEIDLSSLSSVARFCSQF------LSQDLPLNILINNAGVFSPNLEF 135

Query: 177 TSE 180
           + E
Sbjct: 139 SEE 135

[Close]

BLAST of Carg01356 vs. TAIR 10
Match: AT4G09750.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 5.5e-06
Identity = 38/110 (34.55%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 73  CVITGVKLPATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEKALLKAFQV 132
           CV+TG    A SG+G AAA  L+ RG  V +  R++    + +S+I+       +     
Sbjct: 46  CVVTG----ANSGIGFAAAEGLASRGATVYMVCRNKERGQEALSKIQTSTGNQNVYLEVC 105

Query: 133 DLLSVRSILDFKNSFQLWLQGSKMHPSLQLLINNAGILATSSRSTSEGYD 183
           DL SV  I  F +SF      SK  P + +L+NNAG+L     +T EG++
Sbjct: 106 DLSSVNEIKSFASSF-----ASKDVP-VHVLVNNAGLLENKRTTTPEGFE 145

The following BLAST results are available for this feature:

BLAST of Carg01356 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016662.1	2.3e-102	100.00	Dehydrogenase/reductase SDR family member on chromosome X, partial [Cucurbita ar...	[more]
KAG6579145.1	1.2e-87	96.74	Dehydrogenase/reductase SDR family member on chromosome X, partial [Cucurbita ar...	[more]
XP_023551555.1	1.0e-86	95.65	dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita pepo s...	[more]
XP_022939811.1	9.5e-85	94.57	dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita moscha...	[more]
XP_022993465.1	6.2e-84	93.48	dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita maxima...	[more]

BLAST of Carg01356 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74959	5.9e-05	27.97	Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
Q9ZAU1	2.3e-04	31.68	Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius OX=1950 ...	[more]
Q53877	5.0e-04	31.19	Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) OX...	[more]

BLAST of Carg01356 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGW7	4.6e-85	94.57	dehydrogenase/reductase SDR family member on chromosome X-like OS=Cucurbita mosc...	[more]
A0A6J1JYL2	3.0e-84	93.48	dehydrogenase/reductase SDR family member on chromosome X-like OS=Cucurbita maxi...	[more]
A0A1S4DT43	2.7e-77	85.87	dehydrogenase/reductase SDR family member on chromosome X-like isoform X1 OS=Cuc...	[more]
A0A6J1CZD5	2.9e-71	81.52	dehydrogenase/reductase SDR family member on chromosome X-like OS=Momordica char...	[more]
A0A5A7U2W8	1.4e-54	68.48	Dehydrogenase/reductase SDR family member on chromosome X-like isoform X2 OS=Cuc...	[more]

BLAST of Carg01356 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04070.1	2.2e-39	50.52	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G15940.1	1.3e-36	48.88	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G50130.2	1.1e-06	30.89	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G50130.1	1.1e-06	30.89	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G09750.1	5.5e-06	34.55	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 71..198 e-value: 5.6E-16 score: 60.6
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 9..197
None	No IPR available	PANTHER	PTHR24320:SF185	BNACNNG10380D PROTEIN	coord: 9..197
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 82..175 e-value: 1.1E-8 score: 34.8
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 73..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01356-RA	Carg01356-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity