Carg01291 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01291
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HTH myb-type domain-containing protein
Location	Carg_Chr06: 195641 .. 196501 (+)
RNA-Seq Expression	Carg01291
Synteny	Carg01291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAAGATGATTCTAATTGGTTTTCAAAACGGGATCAGGAGCTTCCCTCTCCTGATGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTTTGGCATTTGATATCAGAAACCCAGATAGTTCCATCAACAACAACAACCACCACCACCCACCGCCTCCGCCGCCTCCGGTGCCAATCCAGCCGAGTTCGGCCGATTTTGGGGATTCTGGTGATTTTGTGTCTGGCGCCGGCGCTGGAGACGAACCTGCGAGGACCCTGAAGAGGCCGCGCCTCGTCTGGACTCCACAGCTCCACAAGCGATTTGTCGACGCGGTCGGCCATTTGGGAATAAAAAATGCTGTACCTAAAACCATAATGCAGTTGATGAGCGTGGATGGGTTAACTCGTGAGAACGTGGCTAGCCATTTGCAGAAATATCGCCTCTATTTGAAGCGTATGCAGGGGATTTCCGGCGGCAGTGGCGGCGGAGTTAGTGGCGGTGCTGGATTAGTTTCACCCGTTTCAGATCCTGCTACCGACCATTTGTTCGCCAGCTCTCCAGTTCCACCGCATTTTCTTCACTCCTCTCGGGCTAATTCCGACCATTTCCTGCCGTTTGTGCCCGTCGGCGCTCTGCAGCACCACCACCAGATGGCCGCCGCCGCTGCCGCTCAATACCACCGACAAGTAGCCCATTTTGGGTCGCCGCCTAATGGGCAGTTTGAGCATCCATTCTTAGCTCGGCCTGTTCACCGGATTGGGACCCCTGTGACTACCCCGGCGACGAATTACAGCGAGGATTTGGATTCGAGTAATGGAACAGGAGGGAGGAAGGTTCTCACTCTTTTCCCCACCGGAAACGATTAA

mRNA sequence

ATGAGGGAAGATGATTCTAATTGGTTTTCAAAACGGGATCAGGAGCTTCCCTCTCCTGATGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTTTGGCATTTGATATCAGAAACCCAGATAGTTCCATCAACAACAACAACCACCACCACCCACCGCCTCCGCCGCCTCCGGTGCCAATCCAGCCGAGTTCGGCCGATTTTGGGGATTCTGGTGATTTTGTGTCTGGCGCCGGCGCTGGAGACGAACCTGCGAGGACCCTGAAGAGGCCGCGCCTCGTCTGGACTCCACAGCTCCACAAGCGATTTGTCGACGCGGTCGGCCATTTGGGAATAAAAAATGCTGTACCTAAAACCATAATGCAGTTGATGAGCGTGGATGGGTTAACTCGTGAGAACGTGGCTAGCCATTTGCAGAAATATCGCCTCTATTTGAAGCGTATGCAGGGGATTTCCGGCGGCAGTGGCGGCGGAGTTAGTGGCGGTGCTGGATTAGTTTCACCCGTTTCAGATCCTGCTACCGACCATTTGTTCGCCAGCTCTCCAGTTCCACCGCATTTTCTTCACTCCTCTCGGGCTAATTCCGACCATTTCCTGCCGTTTGTGCCCGTCGGCGCTCTGCAGCACCACCACCAGATGGCCGCCGCCGCTGCCGCTCAATACCACCGACAAGTAGCCCATTTTGGGTCGCCGCCTAATGGGCAGTTTGAGCATCCATTCTTAGCTCGGCCTGTTCACCGGATTGGGACCCCTGTGACTACCCCGGCGACGAATTACAGCGAGGATTTGGATTCGAGTAATGGAACAGGAGGGAGGAAGGTTCTCACTCTTTTCCCCACCGGAAACGATTAA

Coding sequence (CDS)

ATGAGGGAAGATGATTCTAATTGGTTTTCAAAACGGGATCAGGAGCTTCCCTCTCCTGATGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTTTGGCATTTGATATCAGAAACCCAGATAGTTCCATCAACAACAACAACCACCACCACCCACCGCCTCCGCCGCCTCCGGTGCCAATCCAGCCGAGTTCGGCCGATTTTGGGGATTCTGGTGATTTTGTGTCTGGCGCCGGCGCTGGAGACGAACCTGCGAGGACCCTGAAGAGGCCGCGCCTCGTCTGGACTCCACAGCTCCACAAGCGATTTGTCGACGCGGTCGGCCATTTGGGAATAAAAAATGCTGTACCTAAAACCATAATGCAGTTGATGAGCGTGGATGGGTTAACTCGTGAGAACGTGGCTAGCCATTTGCAGAAATATCGCCTCTATTTGAAGCGTATGCAGGGGATTTCCGGCGGCAGTGGCGGCGGAGTTAGTGGCGGTGCTGGATTAGTTTCACCCGTTTCAGATCCTGCTACCGACCATTTGTTCGCCAGCTCTCCAGTTCCACCGCATTTTCTTCACTCCTCTCGGGCTAATTCCGACCATTTCCTGCCGTTTGTGCCCGTCGGCGCTCTGCAGCACCACCACCAGATGGCCGCCGCCGCTGCCGCTCAATACCACCGACAAGTAGCCCATTTTGGGTCGCCGCCTAATGGGCAGTTTGAGCATCCATTCTTAGCTCGGCCTGTTCACCGGATTGGGACCCCTGTGACTACCCCGGCGACGAATTACAGCGAGGATTTGGATTCGAGTAATGGAACAGGAGGGAGGAAGGTTCTCACTCTTTTCCCCACCGGAAACGATTAA

Protein sequence

MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPPPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHLFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND

Homology

[Close]

BLAST of Carg01291 vs. NCBI nr
Match: KAG7027714.1 (Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 584.7 bits (1506), Expect = 4.3e-163
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60
           MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP
Sbjct: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60

Query: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120
           PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP
Sbjct: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120

Query: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL
Sbjct: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180

Query: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240
           FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE
Sbjct: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240

Query: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND
Sbjct: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 286

[Close]

BLAST of Carg01291 vs. NCBI nr
Match: KAG6596177.1 (Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 577.4 bits (1487), Expect = 6.8e-161
Identity = 285/287 (99.30%), Postives = 286/287 (99.65%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI-NNNNHHHPPPPP 60
           MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI NNNN+HHPPPPP
Sbjct: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNHHPPPPP 60

Query: 61  PPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAV 120
           PPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAV
Sbjct: 61  PPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAV 120

Query: 121 PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDH 180
           PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDH
Sbjct: 121 PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDH 180

Query: 181 LFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQF 240
           LFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQF
Sbjct: 181 LFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQF 240

Query: 241 EHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           EHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND
Sbjct: 241 EHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287

[Close]

BLAST of Carg01291 vs. NCBI nr
Match: XP_022958435.1 (transcription factor MYBC1-like [Cucurbita moschata])

HSP 1 Score: 574.3 bits (1479), Expect = 5.8e-160
Identity = 284/286 (99.30%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60
           MREDDSNWFSK DQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNN HHPPPPPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNN-HHPPPPPP 60

Query: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120
           PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP
Sbjct: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120

Query: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL
Sbjct: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180

Query: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240
           FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE
Sbjct: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240

Query: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND
Sbjct: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 285

[Close]

BLAST of Carg01291 vs. NCBI nr
Match: XP_023540127.1 (transcription factor MYBC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159
Identity = 283/288 (98.26%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI--NNNNHHHPPPP 60
           MREDDSNWFSK DQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI  NNNNHHHPPPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNHHHPPPP 60

Query: 61  PPPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120
           PPPVPIQPSSADFGDSGD+VSGAG GDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA
Sbjct: 61  PPPVPIQPSSADFGDSGDYVSGAGDGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120

Query: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATD 180
           VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATD
Sbjct: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATD 180

Query: 181 HLFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ 240
           HLFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ
Sbjct: 181 HLFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ 240

Query: 241 FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND
Sbjct: 241 FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 288

[Close]

BLAST of Carg01291 vs. NCBI nr
Match: XP_022971205.1 (transcription factor MYBC1-like [Cucurbita maxima])

HSP 1 Score: 568.9 bits (1465), Expect = 2.4e-158
Identity = 281/288 (97.57%), Postives = 283/288 (98.26%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI--NNNNHHHPPPP 60
           MREDDSNWFSK DQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI  NNNN+HHPPPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNNHHPPPP 60

Query: 61  PPPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120
           PPPVPIQPSSADFGDSGDFVSGAGAG+EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA
Sbjct: 61  PPPVPIQPSSADFGDSGDFVSGAGAGEEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120

Query: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATD 180
           VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGI GGSGGGVSGGAGLVSPVSDPATD
Sbjct: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGIPGGSGGGVSGGAGLVSPVSDPATD 180

Query: 181 HLFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ 240
           HLFASSPVPPHFLHSSR NSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ
Sbjct: 181 HLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ 240

Query: 241 FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND
Sbjct: 241 FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 288

[Close]

BLAST of Carg01291 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-59
Identity = 133/216 (61.57%), Postives = 157/216 (72.69%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNN----HHH-- 60
           MRED+ NWF + ++ELPSP+EL+P+SQTLITP LALAF I +P+  + +      +H   
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -----PPPPPPPVPIQPSSADF--GDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFV 120
                P  P P  P    ++DF  GDS D  SG+  G EPARTLKRPRLVWTPQLHKRFV
Sbjct: 61  QSSTTPTTPTPTPPPMMMNSDFGGGDSTDLGSGS-IGGEPARTLKRPRLVWTPQLHKRFV 120

Query: 121 DAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAG 180
           DAVGHLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQ   GG+G G++GG  
Sbjct: 121 DAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQ---GGNGNGITGGHV 180

Query: 181 LVSPVSDPATDHLFASSPVPPHFLHSSRANSDHFLP 204
           +   VSD ATD LFASSPVP HFL     + D+ +P
Sbjct: 181 I---VSDSATDRLFASSPVPAHFL-----SPDYLMP 204

[Close]

BLAST of Carg01291 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-34
Identity = 99/225 (44.00%), Postives = 120/225 (53.33%), Query Frame = 0


Query: 5   DSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDI------------------------ 64
           D +  S+ +  LPS ++L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  --RNPDSSINNNNHHH-----PPPPPPPVPIQPSSADFGDSGDFV----------SGAGA 124
               P++S +NNN           P      Q +S   GD G  V            +G 
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 GDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 184
            D   +TLKRPRLVWTPQLHKRFVD V HLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

Query: 185 YRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHLFASSPVPP 189
           YRLYLKRMQG++                    A+D LF+S+PVPP
Sbjct: 195 YRLYLKRMQGLTN---------------EGPSASDKLFSSTPVPP 224

[Close]

BLAST of Carg01291 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-32
Identity = 100/230 (43.48%), Postives = 119/230 (51.74%), Query Frame = 0


Query: 16  LPSPDELMPLSQTLITPDLALAF-----------DIRNPDSSINNNNHHHPPPPPPPVPI 75
           LP  DEL PLSQ L+   LA AF           D+    ++  +             P 
Sbjct: 26  LPGADELTPLSQPLVPAGLAAAFRIPPEPGRTLLDVHRASAATVSRLRRASSSSSSSFPA 85

Query: 76  QPS-----SADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAV 135
             S      AD  +SG    G G G+    + KR RLVWTPQLHKRFV+ V HLG+KNAV
Sbjct: 86  FASKGAGTGADEAESGGGADG-GNGNTNNSSSKRARLVWTPQLHKRFVEVVAHLGMKNAV 145

Query: 136 PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDH 195
           PKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQG+S              SP     +DH
Sbjct: 146 PKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEG----------PSP-----SDH 205

Query: 196 LFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQ----MAAAAAAQYH 226
           +FAS+PVP   LH    +  H  P        HHH       AA  + YH
Sbjct: 206 IFASTPVPHASLHDQVPSPYHPHP--------HHHSYNNAAYAATVSSYH 231

[Close]

BLAST of Carg01291 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31
Identity = 106/279 (37.99%), Postives = 138/279 (49.46%), Query Frame = 0


Query: 16  LPSPDELMPLSQTLITPDLALAFDI-------------------------RNPDSSINNN 75
           LP+ D+L PLSQ L+   LALAF +                          N  S +   
Sbjct: 33  LPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSVMEEV 92

Query: 76  NHHHPPPPPPPVPIQPSSADFG------DSGDFVSGAGAGDEPARTLKRPRLVWTPQLHK 135
                   P   P +   +D G      DS      +G  D   +T KRPRLVWTPQLHK
Sbjct: 93  VDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHK 152

Query: 136 RFVDAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSG 195
           RFVD V HLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QG++         
Sbjct: 153 RFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEE------ 212

Query: 196 GAGLVSPVSDPATDHLFASSPVPPHFLHSSRANSDHFLPFVPVGAL----QHHHQMAAAA 255
                 P S  ++D LF+S+PVPP        ++      VPV ++     + +QM    
Sbjct: 213 -----DPYS--SSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSMVPIPGYGNQMGMQG 272

Query: 256 AAQYHRQVAHFGSPPNGQFEHPFLARPVHRIGTPVTTPA 260
              Y++Q ++ G+  N            ++ GT VT P+
Sbjct: 273 ---YYQQYSNHGNESNQYMMQQ------NKFGTMVTYPS 289

[Close]

BLAST of Carg01291 vs. ExPASy Swiss-Prot
Match: Q940D0 (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20
Identity = 46/75 (61.33%), Postives = 61/75 (81.33%), Query Frame = 0


Query: 85  DEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 144
           DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V GLTRENVASHLQKY
Sbjct: 229 DEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKY 288

Query: 145 RLYLKRMQGISGGSG 160
           R+YL+R+ G+S   G
Sbjct: 289 RIYLRRLGGVSQHQG 303

[Close]

BLAST of Carg01291 vs. ExPASy TrEMBL
Match: A0A6J1H3F6 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111459631 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 284/286 (99.30%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60
           MREDDSNWFSK DQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNN HHPPPPPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNN-HHPPPPPP 60

Query: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120
           PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP
Sbjct: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120

Query: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL
Sbjct: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180

Query: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240
           FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE
Sbjct: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240

Query: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND
Sbjct: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 285

[Close]

BLAST of Carg01291 vs. ExPASy TrEMBL
Match: A0A6J1I541 (transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111469997 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.2e-158
Identity = 281/288 (97.57%), Postives = 283/288 (98.26%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI--NNNNHHHPPPP 60
           MREDDSNWFSK DQELPSPDELMPLSQTLITPDLALAFDIRNPDSSI  NNNN+HHPPPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNNHHPPPP 60

Query: 61  PPPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120
           PPPVPIQPSSADFGDSGDFVSGAGAG+EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA
Sbjct: 61  PPPVPIQPSSADFGDSGDFVSGAGAGEEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120

Query: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATD 180
           VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGI GGSGGGVSGGAGLVSPVSDPATD
Sbjct: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGIPGGSGGGVSGGAGLVSPVSDPATD 180

Query: 181 HLFASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ 240
           HLFASSPVPPHFLHSSR NSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ
Sbjct: 181 HLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQHHHQMAAAAAAQYHRQVAHFGSPPNGQ 240

Query: 241 FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND
Sbjct: 241 FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 288

[Close]

BLAST of Carg01291 vs. ExPASy TrEMBL
Match: A0A5A7UK93 (Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006440 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135
Identity = 251/290 (86.55%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60
           M+EDDSNWFSK +QELPSPDELMPLSQTLITPDLALAFDI N  S+  N++H  PPPPPP
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITN--SNPLNDSHPPPPPPPP 60

Query: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120
           PV IQPSSADF DSGD   G+GAGDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVP
Sbjct: 61  PVIIQPSSADFADSGDL--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 120

Query: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGG +GGAGLVSP SDPATDHL
Sbjct: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGANGGAGLVSPASDPATDHL 180

Query: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQM--AAAAAAQYHRQVAHFGS--PPN 240
           FASSPVPPHFLHS+R NSDHFLPFVPVGALQHHH    AAAAAAQYHRQVAHFGS  P N
Sbjct: 181 FASSPVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTN 240

Query: 241 GQFEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           GQFE+ FLARPVHR+G PV+TP TNYSEDLDS NGTGGRKVLTLFPTGND
Sbjct: 241 GQFENTFLARPVHRVGAPVSTPVTNYSEDLDSGNGTGGRKVLTLFPTGND 286

[Close]

BLAST of Carg01291 vs. ExPASy TrEMBL
Match: A0A1S3B723 (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103486866 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135
Identity = 251/290 (86.55%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60
           M+EDDSNWFSK +QELPSPDELMPLSQTLITPDLALAFDI N  S+  N++H  PPPPPP
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITN--SNPLNDSHPPPPPPPP 60

Query: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120
           PV IQPSSADF DSGD   G+GAGDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVP
Sbjct: 61  PVIIQPSSADFADSGDL--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 120

Query: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGG +GGAGLVSP SDPATDHL
Sbjct: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGANGGAGLVSPASDPATDHL 180

Query: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQM--AAAAAAQYHRQVAHFGS--PPN 240
           FASSPVPPHFLHS+R NSDHFLPFVPVGALQHHH    AAAAAAQYHRQVAHFGS  P N
Sbjct: 181 FASSPVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTN 240

Query: 241 GQFEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           GQFE+ FLARPVHR+G PV+TP TNYSEDLDS NGTGGRKVLTLFPTGND
Sbjct: 241 GQFENTFLARPVHRVGAPVSTPVTNYSEDLDSGNGTGGRKVLTLFPTGND 286

[Close]

BLAST of Carg01291 vs. ExPASy TrEMBL
Match: A0A0A0LC84 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G817730 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.7e-134
Identity = 248/290 (85.52%), Postives = 260/290 (89.66%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60
           M+EDDSNWFSK +QELPSPDELMPLSQTLITPDLALAFDI N  S+  N++H  PPPPPP
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITN--SNPPNDSHPPPPPPPP 60

Query: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120
           PV IQP+SADF DSGD   G+GAGDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVP
Sbjct: 61  PVLIQPTSADFADSGDL--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 120

Query: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGG +GGAGLVS  SDPATDHL
Sbjct: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGANGGAGLVSTASDPATDHL 180

Query: 181 FASSPVPPHFLHSSRANSDHFLPFVPVGALQHHHQM--AAAAAAQYHRQVAHFGS--PPN 240
           FASSPVPPHFLHS+R NSDHFLPFVPVGALQHHH    AAAAAAQYHRQVAHFGS  P N
Sbjct: 181 FASSPVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTN 240

Query: 241 GQFEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287
           GQFE+ FLARPVHR+G P +TP TNYSEDLDS NGTGGRKVLTLFPTGND
Sbjct: 241 GQFENTFLARPVHRVGAPASTPVTNYSEDLDSGNGTGGRKVLTLFPTGND 286

[Close]

BLAST of Carg01291 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 341.7 bits (875), Expect = 5.9e-94
Identity = 201/346 (58.09%), Postives = 230/346 (66.47%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNN-----HHHP 60
           MREDDS+WF++ ++ELPSP+ELMP+SQ+LI+PDLALAFDIR P+    N+N     HHH 
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  PPPPPPVPIQ------PSSADF-GDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVD 120
             PP P  +Q       SSA+F  DS D  SG  AGDEPARTLKRPRLVWTPQLHKRFVD
Sbjct: 61  TTPPTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHKRFVD 120

Query: 121 AVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGL 180
           AV HLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQG+S G G G       
Sbjct: 121 AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAG------- 180

Query: 181 VSPVSDPATDHLFASSPVPPHFLHSSRA-NSDHFLP-FVPVGALQHHHQMAAAAAA---- 240
               SDPATD LFASSPVP HFLH +R  +SDHF+P FVP+  LQ   QMAAAAAA    
Sbjct: 181 ----SDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQQQQMAAAAAAAAAA 240

Query: 241 -------QYHRQV--AHFGSPPNGQFEHP--------------------------FLA-- 287
                  Q+HRQ+  AHFGSP NG F  P                          FLA  
Sbjct: 241 NPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFLAVR 300

[Close]

BLAST of Carg01291 vs. TAIR 10
Match: AT5G05090.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-75
Identity = 170/298 (57.05%), Postives = 203/298 (68.12%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHHPPPPPP 60
           MRE+DSNWF+K ++ELPSP+EL+PLSQ+LITPDLA+AFD+        NNN +   P P 
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLH------RNNNSNSGQPLPQ 60

Query: 61  PVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 120
             P QP+S+        ++G   GDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVP
Sbjct: 61  TTPPQPNSS------AEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVP 120

Query: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHL 180
           KTIMQLMSVDGLTRENVASHLQKYRLYLKRM+  SGG GGG SG            +DHL
Sbjct: 121 KTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGGGGGG-SGD-----------SDHL 180

Query: 181 FASSPVPPHFLH-SSRANSDHFLP-FVPVGALQHHHQMAAAAAAQYHRQVA--HFGSPPN 240
           FASSPVPPHFLH +SR +SD F+P FVP+   Q H  +AA  +   HRQ++  +F SP  
Sbjct: 181 FASSPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH--IAAPPSQFLHRQISAVNFTSPTK 240

Query: 241 GQFEHPFLARPVHRIGTPVTTPAT--------NYSEDLDSSNGTGGRKVLTLFPTGND 287
              +  FLAR    +  PV  P++        NY++DL S    G + VLTLFPT +D
Sbjct: 241 ATDQAMFLARQQSELQQPVFKPSSLHLHSQVANYTQDLKS----GAKTVLTLFPTRDD 266

[Close]

BLAST of Carg01291 vs. TAIR 10
Match: AT2G40970.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 231.5 bits (589), Expect = 8.5e-61
Identity = 133/216 (61.57%), Postives = 157/216 (72.69%), Query Frame = 0


Query: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNN----HHH-- 60
           MRED+ NWF + ++ELPSP+EL+P+SQTLITP LALAF I +P+  + +      +H   
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -----PPPPPPPVPIQPSSADF--GDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFV 120
                P  P P  P    ++DF  GDS D  SG+  G EPARTLKRPRLVWTPQLHKRFV
Sbjct: 61  QSSTTPTTPTPTPPPMMMNSDFGGGDSTDLGSGS-IGGEPARTLKRPRLVWTPQLHKRFV 120

Query: 121 DAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAG 180
           DAVGHLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQ   GG+G G++GG  
Sbjct: 121 DAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQ---GGNGNGITGGHV 180

Query: 181 LVSPVSDPATDHLFASSPVPPHFLHSSRANSDHFLP 204
           +   VSD ATD LFASSPVP HFL     + D+ +P
Sbjct: 181 I---VSDSATDRLFASSPVPAHFL-----SPDYLMP 204

[Close]

BLAST of Carg01291 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 9.5e-36
Identity = 99/225 (44.00%), Postives = 120/225 (53.33%), Query Frame = 0


Query: 5   DSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDI------------------------ 64
           D +  S+ +  LPS ++L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  --RNPDSSINNNNHHH-----PPPPPPPVPIQPSSADFGDSGDFV----------SGAGA 124
               P++S +NNN           P      Q +S   GD G  V            +G 
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 GDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 184
            D   +TLKRPRLVWTPQLHKRFVD V HLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

Query: 185 YRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHLFASSPVPP 189
           YRLYLKRMQG++                    A+D LF+S+PVPP
Sbjct: 195 YRLYLKRMQGLTN---------------EGPSASDKLFSSTPVPP 224

[Close]

BLAST of Carg01291 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 9.5e-36
Identity = 99/225 (44.00%), Postives = 120/225 (53.33%), Query Frame = 0


Query: 5   DSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDI------------------------ 64
           D +  S+ +  LPS ++L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  --RNPDSSINNNNHHH-----PPPPPPPVPIQPSSADFGDSGDFV----------SGAGA 124
               P++S +NNN           P      Q +S   GD G  V            +G 
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 GDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 184
            D   +TLKRPRLVWTPQLHKRFVD V HLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

Query: 185 YRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHLFASSPVPP 189
           YRLYLKRMQG++                    A+D LF+S+PVPP
Sbjct: 195 YRLYLKRMQGLTN---------------EGPSASDKLFSSTPVPP 224

The following BLAST results are available for this feature:

BLAST of Carg01291 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027714.1	4.3e-163	100.00	Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596177.1	6.8e-161	99.30	Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022958435.1	5.8e-160	99.30	transcription factor MYBC1-like [Cucurbita moschata]	[more]
XP_023540127.1	1.3e-159	98.26	transcription factor MYBC1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971205.1	2.4e-158	97.57	transcription factor MYBC1-like [Cucurbita maxima]	[more]

BLAST of Carg01291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22210	1.2e-59	61.57	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q9SNB4	1.3e-34	44.00	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q94DH3	3.6e-32	43.48	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
Q9LTH4	2.4e-31	37.99	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
Q940D0	1.1e-20	61.33	Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE...	[more]

BLAST of Carg01291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3F6	2.8e-160	99.30	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111459631 PE...	[more]
A0A6J1I541	1.2e-158	97.57	transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111469997 PE=4...	[more]
A0A5A7UK93	1.8e-135	86.55	Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B723	1.8e-135	86.55	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103486866 PE=4 SV=1	[more]
A0A0A0LC84	7.7e-134	85.52	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G81773...	[more]

BLAST of Carg01291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10760.1	5.9e-94	58.09	Homeodomain-like superfamily protein	[more]
AT5G05090.1	1.6e-75	57.05	Homeodomain-like superfamily protein	[more]
AT2G40970.1	8.5e-61	61.57	Homeodomain-like superfamily protein	[more]
AT3G46640.1	9.5e-36	44.00	Homeodomain-like superfamily protein	[more]
AT3G46640.2	9.5e-36	44.00	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 94..146 e-value: 5.5E-24 score: 82.2
None	No IPR available	GENE3D	1.10.10.60		coord: 90..152 e-value: 1.7E-31 score: 110.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31442:SF31	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..286
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 97..145 e-value: 1.5E-7 score: 31.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 98..149 score: 10.851604
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..286
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 90..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01291-RA	Carg01291-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity