Carg01282 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01282
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr06: 244043 .. 244473 (-)
RNA-Seq ExpressionCarg01282
SyntenyCarg01282
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTTGTGTACAAAAATTTTGGTGGAACAGGTTCCATTTTTCTGGGGAGGCAGAGAAGAGCAACATGCAGCTGTAAACGCTTGCTGTTGTCATTAGAAGCAGGGAGGAAGATTGGGTCAAGAAAGATTGGGCTGTACATTAGGTAAGCGAAGTGTAGAGGACATCAGAAGCTTATTGCGGTGGGTGAGGAATTTTTTGTTTCGTTGTTCAACATGTTGGTTGCTTTACGTTTTCATGTATCCAAAGTGGCTTTAAAATAAAGCTCAAATTCCACATGCCACTTTCAGATTCTATTCACACACTGATTCATCTATTCTTCTATTTCTTTTACCACTTTTTTCTTGTTAGCTATATCTGTCTTGCTTCCTTCTTCTTCTCCCTCTCGGCAGCTTCTCCTCCCCCTTGTAAATGGGTCCGAACCGACTGA

mRNA sequence

ATGAAAGTTGTGTACAAAAATTTTGGTGGAACAGGTTCCATTTTTCTGGGGAGGCAGAGAAGAGCAACATGCAGCTGTAAACGCTTGCTGTTGTCATTAGAAGCAGGGAGGAAGATTGGGTCAAGAAAGATTGGGCTGTACATTAGCTATATCTGTCTTGCTTCCTTCTTCTTCTCCCTCTCGGCAGCTTCTCCTCCCCCTTGTAAATGGGTCCGAACCGACTGA

Coding sequence (CDS)

ATGAAAGTTGTGTACAAAAATTTTGGTGGAACAGGTTCCATTTTTCTGGGGAGGCAGAGAAGAGCAACATGCAGCTGTAAACGCTTGCTGTTGTCATTAGAAGCAGGGAGGAAGATTGGGTCAAGAAAGATTGGGCTGTACATTAGCTATATCTGTCTTGCTTCCTTCTTCTTCTCCCTCTCGGCAGCTTCTCCTCCCCCTTGTAAATGGGTCCGAACCGACTGA

Protein sequence

MKVVYKNFGGTGSIFLGRQRRATCSCKRLLLSLEAGRKIGSRKIGLYISYICLASFFFSLSAASPPPCKWVRTD
Homology
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BLAST of Carg01282 vs. NCBI nr
Match: KAG7027723.1 (hypothetical protein SDJN02_08900, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 2.8e-34
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MKVVYKNFGGTGSIFLGRQRRATCSCKRLLLSLEAGRKIGSRKIGLYISYICLASFFFSL 60
          MKVVYKNFGGTGSIFLGRQRRATCSCKRLLLSLEAGRKIGSRKIGLYISYICLASFFFSL
Sbjct: 1  MKVVYKNFGGTGSIFLGRQRRATCSCKRLLLSLEAGRKIGSRKIGLYISYICLASFFFSL 60

Query: 61 SAASPPPCKWVRTD 75
          SAASPPPCKWVRTD
Sbjct: 61 SAASPPPCKWVRTD 74

The following BLAST results are available for this feature:
BLAST of Carg01282 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7027723.12.8e-34100.00hypothetical protein SDJN02_08900, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg01282 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg01282 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg01282 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01282-RACarg01282-RAmRNA