Carg01260 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01260
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L7-1-like
Location	Carg_Chr06: 349036 .. 351275 (+)
RNA-Seq Expression	Carg01260
Synteny	Carg01260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGAGGAACCCTAAACCCACACCGTCTTCATCTCCTTCTCCCGCAGATCAGTTTCGCCGCCGTCTTTATTCCGATCGTGGTATCGCAGCTTCCCGCGACTTTCTTCTCTATTGTCATTACTGGTATACTCCCGATCTCCATCCGTCTTTCTTCTCACTATAAAAACGATTCGTTGCTAGTCTCAGGCGTTGATTACTCCCTTGCCCTGTTGGTATTGACTACGGGCTGTTCTTTCCGGTTTGTTTTTCTGATTGGTTGTTGATAGTCTCGTGCGTTGAATGTGAGCTAACTGTTTGCTATTGTTGCCATTTGCACCATAAATCGCTGCGGTTTGTTTTGTTTTTGTTTTTTCAATGATTCTTTTGTAGCATAACACCACTTCGAATTGAAACTCTTTCATATTTAATGTTCTCTCCCTCATTGGTCACGTACAATACCGTCTGCAATTTGAGTGTTTAAGGCTAGCTTTGTTTGTTCAGTTTACAATATGCTTGTTCTATTATTTATTGAGAATGGGAGTTTCATTTTGATTTTTTTTTTTTTTTTCCTGTCTACAGGTGACCTACGATGGCGGAAGAGGATCCAAAGCCACTCACATATATACCAGAGGTTATACTGAAGAAGAGAAAGGTCAATGAACTGGCGGCACTGAGAAGAAAGGAACAGTTGGAATTAAGGAAGCTCAATTCGAAGAAAAACAAGGATGGTTTTATTAAGCTGCCTGAAGAATTTGTCAGAGAATATCGTGCTAGAGTAACTCATCTACTTTGAAGTTGTTTCATCTACTTTGAAGTTAGTTTGAAATATGCTTAATCAACACATGCATAAATCCCCTCTTGAGTAACTTTTCTTAATCGTGTATATAGAAGTATATTTATTCAAATTTGTCTTCCGATAATCACGTGCTTTCTTATCAACATGTTCAAATTTCTTCTAGTGGGTTTTTAACTATGTGCCTAGTAATCAACATGTTAAGCATCACCCTGATTCTTTTTGTACACGTTTATCTTATGTAGGAACTCGACTTCGTCAAGATGAAGCACAGGATAAAGAGAAAAAGAACTGCCTTGGTGCCATCAAAATCAAAATTGATTTTTATAATTCGGATACAGGGGTAAGAATGTCTTAACCTTTACTTTCTTTAACCTCCTTTTGTGTAGCTTCACAAGATTAGTAATTGCTTCACTACATTTTTCCAGCAAGAACGACATGCATCCAAAGACAAGGAGTCTCTTATATAAGCTCGGATTAAGTAGAGTTTTCAGCGGGGTCTTTGCGAAGGCCAATGAGCATACTCTAGGAAAGCTACAAAGGGTGGAGCCATATGTGACATATGGGTATGTGAACAATCATTTTTCTTATATTAGGTCCACTAGATTTCACGCTTCTTTCTCCATGATTTTACTGAAATTTTGGTTGAATTTCAGATACCCTAATCTTAAAAATGTGAGGGAGCTCGTCCATAAGAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGACAATAACATCATCGAACAGGTACGACAAACCATCTTAGCTACTCTACTCCCGGGTTGGAAGGACTTCGATAGCATTTGAAAAAGATTTTTAACTGTCAAAAGTGTTTTTAAGCACATGGCCTTATTCTCTTTTACTTCAATGGTAAATTGCAGGAATTGGGGAAGCATGGAATTCTATGCATGGAGGATATTGTGCATGAAATTGCTAATGTTGGCCCACATTTTAAGGAGGTAATTTCCTTTCTATGGCCCTTTGAACTTGAAAAGCCAGGAAGTGGACTTCAAGGGAAAAAGTCATTGTACAAGGAGGGTGGAGATGCTGGGAATAGAGAGGATGATATCAATGATCTGATTGATGCGATGAATTAGGTTTGAATCAGATCATTTGATTTAAAGTTAGGTTTCAAAAAACCTGAAGGAGCTGATAGTTTCTGTAATTCAATTTTGTTAGTATCATTAGTTTTTATCTTGTTCTACTCATAACTATCAGTTTCTTGACCTATCAGCCTATGAGACTTTTAACTTGTATCCAAGGGCTTGTAATGTGTGGATACACGAAAAATTTTCTGGTGCCACTGTTGTATTTGATCTTTTACCAATTTGGCACAAAACGTTATCAAGTGATATATTATTTTATTTTATTAGCGCTACAATATTCTCACCAAACTCGGTTTGAGTTTGATCTTGACATCAAAGTTATCATCTTATGATGTATTAGTTTTTTACT

mRNA sequence

GAAAGAGGAACCCTAAACCCACACCGTCTTCATCTCCTTCTCCCGCAGATCAGTTTCGCCGCCGTCTTTATTCCGATCGTGGTATCGCAGCTTCCCGCGACTTTCTTCTCTATTGTCATTACTGGTGACCTACGATGGCGGAAGAGGATCCAAAGCCACTCACATATATACCAGAGGTTATACTGAAGAAGAGAAAGGTCAATGAACTGGCGGCACTGAGAAGAAAGGAACAGTTGGAATTAAGGAAGCTCAATTCGAAGAAAAACAAGGATGGTTTTATTAAGCTGCCTGAAGAATTTGTCAGAGAATATCGTGCTAGAGAACTCGACTTCGTCAAGATGAAGCACAGGATAAAGAGAAAAAGAACTGCCTTGGTGCCATCAAAATCAAAATTGATTTTTATAATTCGGATACAGGGCAAGAACGACATGCATCCAAAGACAAGGAGTCTCTTATATAAGCTCGGATTAAGTAGAGTTTTCAGCGGGGTCTTTGCGAAGGCCAATGAGCATACTCTAGGAAAGCTACAAAGGGTGGAGCCATATGTGACATATGGATACCCTAATCTTAAAAATGTGAGGGAGCTCGTCCATAAGAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGACAATAACATCATCGAACAGGAATTGGGGAAGCATGGAATTCTATGCATGGAGGATATTGTGCATGAAATTGCTAATGTTGGCCCACATTTTAAGGAGGTAATTTCCTTTCTATGGCCCTTTGAACTTGAAAAGCCAGGAAGTGGACTTCAAGGGAAAAAGTCATTGTACAAGGAGGGTGGAGATGCTGGGAATAGAGAGGATGATATCAATGATCTGATTGATGCGATGAATTAGGTTTGAATCAGATCATTTGATTTAAAGTTAGGTTTCAAAAAACCTGAAGGAGCTGATAGTTTCTGTAATTCAATTTTGTTAGTATCATTAGTTTTTATCTTGTTCTACTCATAACTATCAGTTTCTTGACCTATCAGCCTATGAGACTTTTAACTTGTATCCAAGGGCTTGTAATGTGTGGATACACGAAAAATTTTCTGGTGCCACTGTTGTATTTGATCTTTTACCAATTTGGCACAAAACGTTATCAAGTGATATATTATTTTATTTTATTAGCGCTACAATATTCTCACCAAACTCGGTTTGAGTTTGATCTTGACATCAAAGTTATCATCTTATGATGTATTAGTTTTTTACT

Coding sequence (CDS)

ATGGCGGAAGAGGATCCAAAGCCACTCACATATATACCAGAGGTTATACTGAAGAAGAGAAAGGTCAATGAACTGGCGGCACTGAGAAGAAAGGAACAGTTGGAATTAAGGAAGCTCAATTCGAAGAAAAACAAGGATGGTTTTATTAAGCTGCCTGAAGAATTTGTCAGAGAATATCGTGCTAGAGAACTCGACTTCGTCAAGATGAAGCACAGGATAAAGAGAAAAAGAACTGCCTTGGTGCCATCAAAATCAAAATTGATTTTTATAATTCGGATACAGGGCAAGAACGACATGCATCCAAAGACAAGGAGTCTCTTATATAAGCTCGGATTAAGTAGAGTTTTCAGCGGGGTCTTTGCGAAGGCCAATGAGCATACTCTAGGAAAGCTACAAAGGGTGGAGCCATATGTGACATATGGATACCCTAATCTTAAAAATGTGAGGGAGCTCGTCCATAAGAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGACAATAACATCATCGAACAGGAATTGGGGAAGCATGGAATTCTATGCATGGAGGATATTGTGCATGAAATTGCTAATGTTGGCCCACATTTTAAGGAGGTAATTTCCTTTCTATGGCCCTTTGAACTTGAAAAGCCAGGAAGTGGACTTCAAGGGAAAAAGTCATTGTACAAGGAGGGTGGAGATGCTGGGAATAGAGAGGATGATATCAATGATCTGATTGATGCGATGAATTAG

Protein sequence

MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYRARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN

Homology

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BLAST of Carg01260 vs. NCBI nr
Match: KAG7027745.1 (60S ribosomal protein L7-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.8 bits (1257), Expect = 2.7e-134
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR
Sbjct: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF
Sbjct: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH
Sbjct: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND
Sbjct: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240

Query: 241 LIDAMN 247
           LIDAMN
Sbjct: 241 LIDAMN 246

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BLAST of Carg01260 vs. NCBI nr
Match: KAG6596206.1 (60S ribosomal protein L7-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486.9 bits (1252), Expect = 1.0e-133
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKN DGFIKLPEEFVREYR
Sbjct: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNNDGFIKLPEEFVREYR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF
Sbjct: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH
Sbjct: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND
Sbjct: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240

Query: 241 LIDAMN 247
           LIDAMN
Sbjct: 241 LIDAMN 246

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BLAST of Carg01260 vs. NCBI nr
Match: XP_022971274.1 (60S ribosomal protein L7-1-like [Cucurbita maxima] >XP_023539261.1 60S ribosomal protein L7-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.3 bits (1248), Expect = 3.0e-133
Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MA+EDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR
Sbjct: 1   MADEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF
Sbjct: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANEH LGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH
Sbjct: 121 AKANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND
Sbjct: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240

Query: 241 LIDAMN 247
           LIDAMN
Sbjct: 241 LIDAMN 246

[Close]

BLAST of Carg01260 vs. NCBI nr
Match: XP_022944010.1 (60S ribosomal protein L7-1-like [Cucurbita moschata])

HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-132
Identity = 242/246 (98.37%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR
Sbjct: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTR+LLYKLGLSRVFSGVF
Sbjct: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRTLLYKLGLSRVFSGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANEH LGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH
Sbjct: 121 AKANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GILCMEDIVHEIANVGPHF+EVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIN+
Sbjct: 181 GILCMEDIVHEIANVGPHFREVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINE 240

Query: 241 LIDAMN 247
           LIDAMN
Sbjct: 241 LIDAMN 246

[Close]

BLAST of Carg01260 vs. NCBI nr
Match: XP_031739353.1 (60S ribosomal protein L7-1 [Cucumis sativus] >KAE8651471.1 hypothetical protein Csa_000852 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 2.3e-120
Identity = 222/247 (89.88%), Postives = 233/247 (94.33%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEEDPKPL YIPE+ILKKRKVNE AALRRKEQLELRKL+SKKNKDGFIKLPEEFVREYR
Sbjct: 3   MAEEDPKPLAYIPEIILKKRKVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVREYR 62

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELD VKMKHRIKRKR+A+VPS SKLIFIIRIQGKNDMHPKTR +LY LGLSR+FS VF
Sbjct: 63  ARELDLVKMKHRIKRKRSAIVPSTSKLIFIIRIQGKNDMHPKTRKILYSLGLSRIFSAVF 122

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANE  LGKLQRVEPYVTYGYPNLKNVRELV+KKGFAKIDKQRVPLTDNNIIEQ LGKH
Sbjct: 123 AKANESILGKLQRVEPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKH 182

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSG-LQGKKSLYKEGGDAGNREDDIN 240
           GI+CMED+VHEIANVGPHFKEVISFLWPFELEKPG G LQGKKS YKEGGD+GNREDDIN
Sbjct: 183 GIVCMEDMVHEIANVGPHFKEVISFLWPFELEKPGGGCLQGKKSSYKEGGDSGNREDDIN 242

Query: 241 DLIDAMN 247
           DLI+ MN
Sbjct: 243 DLINEMN 249

[Close]

BLAST of Carg01260 vs. ExPASy Swiss-Prot
Match: Q9SAI5 (60S ribosomal protein L7-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7A PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-72
Identity = 143/247 (57.89%), Postives = 180/247 (72.87%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEE+ K L YIPE++LKKRK  +  A  RK+QLEL     KK K   IK PE+FV E+R
Sbjct: 1   MAEEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           A+E+D ++MK R+KR +++  P KS L+FIIRIQGKNDMHPKT+ +L  L L  VF+GVF
Sbjct: 61  AKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKA +    KL +V+PYVTYGYPN K+V++L++KKG   I+   VPLTDNNIIEQ LG+H
Sbjct: 121 AKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKP-GSGLQGKKSLYKEGGDAGNREDDIN 240
            IL +ED+V+EIA VG HF+EV+ FL P +L KP    L  KK ++ EGGD GNRED IN
Sbjct: 181 KILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKIN 240

Query: 241 DLIDAMN 247
           DLI  MN
Sbjct: 241 DLISKMN 247

[Close]

BLAST of Carg01260 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.4e-64
Identity = 119/235 (50.64%), Postives = 170/235 (72.34%), Query Frame = 0


Query: 12  IPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYRARELDFVKMKH 71
           +PE +LKKRK  E  AL +K+ +E  K  + +N+    K  E++ +EY  +E + + +K 
Sbjct: 8   VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKR 67

Query: 72  RIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHTLGKL 131
             K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K N+ T+  L
Sbjct: 68  EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNML 127

Query: 132 QRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDIVHE 191
           +RVEPYVTYG+PNLK+V+EL++K+G+ K++ QR+ LTDN+I+EQ LGKHGI+C ED++HE
Sbjct: 128 RRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHE 187

Query: 192 IANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN 247
           I  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+LI  MN
Sbjct: 188 ILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242

[Close]

BLAST of Carg01260 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.3e-64
Identity = 120/246 (48.78%), Postives = 176/246 (71.54%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           M E + K  T +PE +LKKRK  E  AL +K++LE  K  + + +       +++ +EY+
Sbjct: 1   MTEAESK--TVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
            +E + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF
Sbjct: 61  EKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
            K N+ T+  L+RVEPYVTYGYPNLK+V+EL++K+GF K++ QR  LTDN+I++Q LGKH
Sbjct: 121 LKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GI+C+ED++HEI  VGPHFKE  +FLWPF+L+ P  G++ K++ Y EGGDAGNRE+ IN+
Sbjct: 181 GIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINE 240

Query: 241 LIDAMN 247
           L+  MN
Sbjct: 241 LVRRMN 244

[Close]

BLAST of Carg01260 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.5e-62
Identity = 115/235 (48.94%), Postives = 169/235 (71.91%), Query Frame = 0


Query: 12  IPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYRARELDFVKMKH 71
           +PE +LKK K  E  AL +K++    K  S + +    K  E++ +EY  ++ + +++K 
Sbjct: 8   VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKR 67

Query: 72  RIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHTLGKL 131
             K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K N+ T+  L
Sbjct: 68  EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNML 127

Query: 132 QRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDIVHE 191
           +RVEPYVTYGYPNLK+V+EL++K+G+ K++ QR+ LTDN+I++Q LGKHGI+C+ED++HE
Sbjct: 128 RRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHE 187

Query: 192 IANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN 247
           I  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+L+  MN
Sbjct: 188 IMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

[Close]

BLAST of Carg01260 vs. ExPASy Swiss-Prot
Match: Q7SBD5 (60S ribosomal protein L7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rpl-7 PE=3 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-56
Identity = 109/236 (46.19%), Postives = 165/236 (69.92%), Query Frame = 0


Query: 12  IPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYRARELDFVKMKH 71
           +PE +LKKRK  E A   R+ ++E +K  +K+ +    K  E +V+EYR  E + ++++ 
Sbjct: 13  VPETLLKKRKSQEKARAERQAEIEKKKAANKEKRAVIFKRAETYVKEYRDVEREKIRLQR 72

Query: 72  RIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHTLGKL 131
             K+  +  +P+++KLIF+IRI+G N + PK R +L  L L ++ +GVF +  + T   +
Sbjct: 73  AAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMI 132

Query: 132 QRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDIVHE 191
           + VEP+V YGYPNLK+V+EL++K+G+ K++KQRV LTDN+IIE+ LGK+GI+CMED++HE
Sbjct: 133 KIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHE 192

Query: 192 IANVGPHFKEVISFLWPFELEKPGSGLQGKK-SLYKEGGDAGNREDDINDLIDAMN 247
           I  VGP+FK+  +FLWPF+L  P  G + +K   + EGGD GNRE+ IN LI  MN
Sbjct: 193 IYTVGPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248

[Close]

BLAST of Carg01260 vs. ExPASy TrEMBL
Match: A0A6J1I831 (60S ribosomal protein L7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470044 PE=3 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.5e-133
Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MA+EDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR
Sbjct: 1   MADEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF
Sbjct: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANEH LGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH
Sbjct: 121 AKANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND
Sbjct: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240

Query: 241 LIDAMN 247
           LIDAMN
Sbjct: 241 LIDAMN 246

[Close]

BLAST of Carg01260 vs. ExPASy TrEMBL
Match: A0A6J1FYF0 (60S ribosomal protein L7-1-like OS=Cucurbita moschata OX=3662 GN=LOC111448566 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 9.5e-133
Identity = 242/246 (98.37%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR
Sbjct: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTR+LLYKLGLSRVFSGVF
Sbjct: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRTLLYKLGLSRVFSGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANEH LGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH
Sbjct: 121 AKANEHILGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GILCMEDIVHEIANVGPHF+EVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIN+
Sbjct: 181 GILCMEDIVHEIANVGPHFREVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINE 240

Query: 241 LIDAMN 247
           LIDAMN
Sbjct: 241 LIDAMN 246

[Close]

BLAST of Carg01260 vs. ExPASy TrEMBL
Match: A0A5D3E729 (60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003720 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 219/248 (88.31%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEEDPKPL YIPE+ILKKRKVNE AALRRKEQLELRKL+SKKNKDGFIKLPEEFVREYR
Sbjct: 3   MAEEDPKPLAYIPEIILKKRKVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVREYR 62

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELD VKMKHR KRKR+A+VPSKS+LIFIIRIQGKNDMHPKTR +LY LGLSR+FS VF
Sbjct: 63  ARELDLVKMKHRTKRKRSAIVPSKSQLIFIIRIQGKNDMHPKTRKILYNLGLSRIFSAVF 122

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANE  LGKLQRVEPYVTYGYPNLKNVRELV+KKGFAKIDKQRVPLTDNNIIEQ LGKH
Sbjct: 123 AKANESVLGKLQRVEPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKH 182

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSG--LQGKKSLYKEGGDAGNREDDI 240
           GI+C+ED+V+EIANVGPHFKEVISFLWPFELEKPG G  LQGKKS YK+GGDAGNREDDI
Sbjct: 183 GIVCVEDMVYEIANVGPHFKEVISFLWPFELEKPGGGGCLQGKKSSYKDGGDAGNREDDI 242

Query: 241 NDLIDAMN 247
           NDLI+ MN
Sbjct: 243 NDLINEMN 250

[Close]

BLAST of Carg01260 vs. ExPASy TrEMBL
Match: A0A1S3CPC0 (60S ribosomal protein L7-1 OS=Cucumis melo OX=3656 GN=LOC103503275 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 219/248 (88.31%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEEDPKPL YIPE+ILKKRKVNE AALRRKEQLELRKL+SKKNKDGFIKLPEEFVREYR
Sbjct: 3   MAEEDPKPLAYIPEIILKKRKVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVREYR 62

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           ARELD VKMKHR KRKR+A+VPSKS+LIFIIRIQGKNDMHPKTR +LY LGLSR+FS VF
Sbjct: 63  ARELDLVKMKHRTKRKRSAIVPSKSQLIFIIRIQGKNDMHPKTRKILYNLGLSRIFSAVF 122

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKANE  LGKLQRVEPYVTYGYPNLKNVRELV+KKGFAKIDKQRVPLTDNNIIEQ LGKH
Sbjct: 123 AKANESVLGKLQRVEPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKH 182

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSG--LQGKKSLYKEGGDAGNREDDI 240
           GI+C+ED+V+EIANVGPHFKEVISFLWPFELEKPG G  LQGKKS YK+GGDAGNREDDI
Sbjct: 183 GIVCVEDMVYEIANVGPHFKEVISFLWPFELEKPGGGGCLQGKKSSYKDGGDAGNREDDI 242

Query: 241 NDLIDAMN 247
           NDLI+ MN
Sbjct: 243 NDLINEMN 250

[Close]

BLAST of Carg01260 vs. ExPASy TrEMBL
Match: A0A5D3E4T2 (60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003740 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.0e-118
Identity = 217/247 (87.85%), Postives = 232/247 (93.93%), Query Frame = 0


Query: 2   AEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYRA 61
           +EEDPKPL YIPE+ILKKRKVNE AALRRKEQLELRKL+SKKNKDGFIKLPEEFVREYRA
Sbjct: 161 SEEDPKPLAYIPEIILKKRKVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVREYRA 220

Query: 62  RELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFA 121
           RELD VKMKHR KRKR+A+VPSKS+LIFIIRIQGKNDMHPKTR +LY LGLSR+FS VFA
Sbjct: 221 RELDLVKMKHRTKRKRSAIVPSKSQLIFIIRIQGKNDMHPKTRKILYNLGLSRIFSAVFA 280

Query: 122 KANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHG 181
           KANE  LGKLQRVEPYVTYGYPNLKNVRELV+KKGFAKIDKQRVPLTDNNIIEQ LGKHG
Sbjct: 281 KANESVLGKLQRVEPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKHG 340

Query: 182 ILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSG--LQGKKSLYKEGGDAGNREDDIN 241
           I+C+ED+V+EIANVGPHFKEVISFLWPFELEKPG G  LQGKKS YK+GGDAGNREDDIN
Sbjct: 341 IVCVEDMVYEIANVGPHFKEVISFLWPFELEKPGGGGCLQGKKSSYKDGGDAGNREDDIN 400

Query: 242 DLIDAMN 247
           DLI+ MN
Sbjct: 401 DLINEMN 407

[Close]

BLAST of Carg01260 vs. TAIR 10
Match: AT1G80750.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 274.2 bits (700), Expect = 9.9e-74
Identity = 143/247 (57.89%), Postives = 180/247 (72.87%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           MAEE+ K L YIPE++LKKRK  +  A  RK+QLEL     KK K   IK PE+FV E+R
Sbjct: 1   MAEEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFR 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
           A+E+D ++MK R+KR +++  P KS L+FIIRIQGKNDMHPKT+ +L  L L  VF+GVF
Sbjct: 61  AKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
           AKA +    KL +V+PYVTYGYPN K+V++L++KKG   I+   VPLTDNNIIEQ LG+H
Sbjct: 121 AKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKP-GSGLQGKKSLYKEGGDAGNREDDIN 240
            IL +ED+V+EIA VG HF+EV+ FL P +L KP    L  KK ++ EGGD GNRED IN
Sbjct: 181 KILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKIN 240

Query: 241 DLIDAMN 247
           DLI  MN
Sbjct: 241 DLISKMN 247

[Close]

BLAST of Carg01260 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 246.9 bits (629), Expect = 1.7e-65
Identity = 119/235 (50.64%), Postives = 170/235 (72.34%), Query Frame = 0


Query: 12  IPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYRARELDFVKMKH 71
           +PE +LKKRK  E  AL +K+ +E  K  + +N+    K  E++ +EY  +E + + +K 
Sbjct: 8   VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKR 67

Query: 72  RIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVFAKANEHTLGKL 131
             K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF K N+ T+  L
Sbjct: 68  EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNML 127

Query: 132 QRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKHGILCMEDIVHE 191
           +RVEPYVTYG+PNLK+V+EL++K+G+ K++ QR+ LTDN+I+EQ LGKHGI+C ED++HE
Sbjct: 128 RRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHE 187

Query: 192 IANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDINDLIDAMN 247
           I  VGPHFKE  +FLWPF+L+ P  GL+ K++ Y EGGDAGNRE+ IN+LI  MN
Sbjct: 188 ILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242

[Close]

BLAST of Carg01260 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65
Identity = 120/246 (48.78%), Postives = 176/246 (71.54%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           M E + K  T +PE +LKKRK  E  AL +K++LE  K  + + +       +++ +EY+
Sbjct: 1   MTEAESK--TVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
            +E + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF
Sbjct: 61  EKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
            K N+ T+  L+RVEPYVTYGYPNLK+V+EL++K+GF K++ QR  LTDN+I++Q LGKH
Sbjct: 121 LKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GI+C+ED++HEI  VGPHFKE  +FLWPF+L+ P  G++ K++ Y EGGDAGNRE+ IN+
Sbjct: 181 GIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINE 240

Query: 241 LIDAMN 247
           L+  MN
Sbjct: 241 LVRRMN 244

[Close]

BLAST of Carg01260 vs. TAIR 10
Match: AT3G13580.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65
Identity = 120/246 (48.78%), Postives = 176/246 (71.54%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           M E + K  T +PE +LKKRK  E  AL +K++LE  K  + + +       +++ +EY+
Sbjct: 1   MTEAESK--TVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
            +E + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF
Sbjct: 61  EKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
            K N+ T+  L+RVEPYVTYGYPNLK+V+EL++K+GF K++ QR  LTDN+I++Q LGKH
Sbjct: 121 LKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GI+C+ED++HEI  VGPHFKE  +FLWPF+L+ P  G++ K++ Y EGGDAGNRE+ IN+
Sbjct: 181 GIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINE 240

Query: 241 LIDAMN 247
           L+  MN
Sbjct: 241 LVRRMN 244

[Close]

BLAST of Carg01260 vs. TAIR 10
Match: AT3G13580.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65
Identity = 120/246 (48.78%), Postives = 176/246 (71.54%), Query Frame = 0


Query: 1   MAEEDPKPLTYIPEVILKKRKVNELAALRRKEQLELRKLNSKKNKDGFIKLPEEFVREYR 60
           M E + K  T +PE +LKKRK  E  AL +K++LE  K  + + +       +++ +EY+
Sbjct: 1   MTEAESK--TVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQ 60

Query: 61  ARELDFVKMKHRIKRKRTALVPSKSKLIFIIRIQGKNDMHPKTRSLLYKLGLSRVFSGVF 120
            +E + +++K   K K    V  ++KL+FIIRI+G N + PKT+ +L  L L ++F+GVF
Sbjct: 61  EKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 121 AKANEHTLGKLQRVEPYVTYGYPNLKNVRELVHKKGFAKIDKQRVPLTDNNIIEQELGKH 180
            K N+ T+  L+RVEPYVTYGYPNLK+V+EL++K+GF K++ QR  LTDN+I++Q LGKH
Sbjct: 121 LKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKH 180

Query: 181 GILCMEDIVHEIANVGPHFKEVISFLWPFELEKPGSGLQGKKSLYKEGGDAGNREDDIND 240
           GI+C+ED++HEI  VGPHFKE  +FLWPF+L+ P  G++ K++ Y EGGDAGNRE+ IN+
Sbjct: 181 GIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINE 240

Query: 241 LIDAMN 247
           L+  MN
Sbjct: 241 LVRRMN 244

The following BLAST results are available for this feature:

BLAST of Carg01260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027745.1	2.7e-134	100.00	60S ribosomal protein L7-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596206.1	1.0e-133	99.59	60S ribosomal protein L7-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022971274.1	3.0e-133	99.19	60S ribosomal protein L7-1-like [Cucurbita maxima] >XP_023539261.1 60S ribosomal...	[more]
XP_022944010.1	2.0e-132	98.37	60S ribosomal protein L7-1-like [Cucurbita moschata]	[more]
XP_031739353.1	2.3e-120	89.88	60S ribosomal protein L7-1 [Cucumis sativus] >KAE8651471.1 hypothetical protein ...	[more]

BLAST of Carg01260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAI5	1.4e-72	57.89	60S ribosomal protein L7-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7A PE=2 SV=1	[more]
P60040	2.4e-64	50.64	60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1	[more]
Q9LHP1	5.3e-64	48.78	60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1	[more]
P60039	6.5e-62	48.94	60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1	[more]
Q7SBD5	1.8e-56	46.19	60S ribosomal protein L7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / ...	[more]

BLAST of Carg01260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I831	1.5e-133	99.19	60S ribosomal protein L7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470044 PE=3...	[more]
A0A6J1FYF0	9.5e-133	98.37	60S ribosomal protein L7-1-like OS=Cucurbita moschata OX=3662 GN=LOC111448566 PE...	[more]
A0A5D3E729	3.5e-119	88.31	60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CPC0	3.5e-119	88.31	60S ribosomal protein L7-1 OS=Cucumis melo OX=3656 GN=LOC103503275 PE=3 SV=1	[more]
A0A5D3E4T2	3.0e-118	87.85	60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Carg01260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80750.1	9.9e-74	57.89	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.1	1.7e-65	50.64	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.3	3.8e-65	48.78	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.2	3.8e-65	48.78	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.1	3.8e-65	48.78	Ribosomal protein L30/L7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42
None	No IPR available	PANTHER	PTHR11524:SF36	60S RIBOSOMAL PROTEIN L7-1	coord: 3..246
IPR012988	Ribosomal protein L30, N-terminal	PFAM	PF08079	Ribosomal_L30_N	coord: 13..82 e-value: 6.1E-10 score: 39.2
IPR005998	Ribosomal protein L7, eukaryotic	TIGRFAM	TIGR01310	TIGR01310	coord: 13..246 e-value: 1.1E-89 score: 298.0
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	PFAM	PF00327	Ribosomal_L30	coord: 88..138 e-value: 2.8E-10 score: 39.9
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	GENE3D	3.30.1390.20		coord: 87..246 e-value: 9.7E-28 score: 98.6
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	SUPERFAMILY	55129	Ribosomal protein L30p/L7e	coord: 87..246
IPR039699	Ribosomal protein L7/L30	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 3..246
IPR035808	Ribosomal protein L7, eukaryotic/archaeal	CDD	cd01657	Ribosomal_L7_archeal_euk	coord: 87..246 e-value: 1.48295E-74 score: 221.632

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01260-RA	Carg01260-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome