Homology
BLAST of Carg01242 vs. NCBI nr
Match:
KAG7027763.1 (putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0
Query: 1 MAINKLTCALLFAAATVTAVVASTEAPALAPGPSSDAAAAAVPAVGAFIGASVASFLSNL 60
MAINKLTCALLFAAATVTAVVASTEAPALAPGPSSDAAAAAVPAVGAFIGASVASFLSNL
Sbjct: 1 MAINKLTCALLFAAATVTAVVASTEAPALAPGPSSDAAAAAVPAVGAFIGASVASFLSNL 60
Query: 61 NMLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMK 120
NMLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMK
Sbjct: 61 NMLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMK 120
Query: 121 FEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFD 180
FEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFD
Sbjct: 121 FEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFD 180
Query: 181 EMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGCLGFEIGRQIHSIVIKRNYESHM 240
EMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGCLGFEIGRQIHSIVIKRNYESHM
Sbjct: 181 EMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGCLGFEIGRQIHSIVIKRNYESHM 240
Query: 241 FVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSE 300
FVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSE
Sbjct: 241 FVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSE 300
Query: 301 GMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYA 360
GMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYA
Sbjct: 301 GMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYA 360
Query: 361 RRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSH 420
RRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSH
Sbjct: 361 RRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSH 420
Query: 421 GQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIW 480
GQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIW
Sbjct: 421 GQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIW 480
Query: 481 GSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEK 540
GSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEK
Sbjct: 481 GSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEK 540
Query: 541 AVIKEPGRSWVELDQIEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGA 600
AVIKEPGRSWVELDQIEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGA
Sbjct: 541 AVIKEPGRSWVELDQIEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGA 600
Query: 601 TIRVIKNLRVCVDCHSFAKFVSKLYART 629
TIRVIKNLRVCVDCHSFAKFVSKLYART
Sbjct: 601 TIRVIKNLRVCVDCHSFAKFVSKLYART 628
BLAST of Carg01242 vs. NCBI nr
Match:
XP_022931556.1 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Cucurbita moschata])
HSP 1 Score: 1106.3 bits (2860), Expect = 0.0e+00
Identity = 558/613 (91.03%), Postives = 563/613 (91.84%), Query Frame = 0
Query: 62 MLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 121
ML RSFC YFHVKDLLLSPIYTFSR+IS+SPS NLKTLCSNGQLNEALLQMAILGSEMKF
Sbjct: 1 MLLRSFCLYFHVKDLLLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKF 60
Query: 122 EGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 181
EGYDTILNQCVS+RAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE
Sbjct: 61 EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 120
Query: 182 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIG 241
MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS G LGF+IG
Sbjct: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIG 180
Query: 242 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 301
RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM
Sbjct: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 240
Query: 302 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 361
GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL
Sbjct: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 300
Query: 362 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 421
NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV
Sbjct: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 360
Query: 422 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 481
KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA
Sbjct: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 420
Query: 482 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 541
FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNL+ASA
Sbjct: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASA 480
Query: 542 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI---------------------------- 601
GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI
Sbjct: 481 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540
Query: 602 -EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 629
EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH
Sbjct: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 600
BLAST of Carg01242 vs. NCBI nr
Match:
XP_023538799.1 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1102.0 bits (2849), Expect = 0.0e+00
Identity = 556/613 (90.70%), Postives = 560/613 (91.35%), Query Frame = 0
Query: 62 MLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 121
ML RSFC YFHVKDLLLSPI TFSRQIS+SPSPNLKTLCSN QLNEALLQMAI GSEMKF
Sbjct: 1 MLRRSFCLYFHVKDLLLSPICTFSRQISISPSPNLKTLCSNAQLNEALLQMAIFGSEMKF 60
Query: 122 EGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 181
EGYDTILNQCVS+RAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKC+CLGDAREVFDE
Sbjct: 61 EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCECLGDAREVFDE 120
Query: 182 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIG 241
MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS G LGFEIG
Sbjct: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFEIG 180
Query: 242 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 301
RQIHSIVIKRNYESHMFVGSSLLDMYAKSGR+HEAHGVFQSLPERDVVVCTAIISGYAQM
Sbjct: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRIHEAHGVFQSLPERDVVVCTAIISGYAQM 240
Query: 302 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 361
GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL
Sbjct: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 300
Query: 362 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 421
NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMG EVLELFKLMREENKV
Sbjct: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGREVLELFKLMREENKV 360
Query: 422 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 481
KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA
Sbjct: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 420
Query: 482 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 541
FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA
Sbjct: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 480
Query: 542 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI---------------------------- 601
GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI
Sbjct: 481 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540
Query: 602 -EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 629
EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH
Sbjct: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 600
BLAST of Carg01242 vs. NCBI nr
Match:
XP_022971213.1 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Cucurbita maxima] >XP_022971214.1 putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Cucurbita maxima])
HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 554/613 (90.38%), Postives = 560/613 (91.35%), Query Frame = 0
Query: 62 MLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 121
ML RSFC YFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF
Sbjct: 1 MLRRSFCLYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 60
Query: 122 EGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 181
EGYDTILNQCVS+RAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKC+CLGDAREVFDE
Sbjct: 61 EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCECLGDAREVFDE 120
Query: 182 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIG 241
MPLRNVVSWTAMISAYSQRGFASQALNLFV MLRS G LGF+IG
Sbjct: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVEMLRSGTEPNEFTFATILTSCIGSLGFKIG 180
Query: 242 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 301
RQIHSIVIKRNYESHMFVGSSLLDMYAKSGR+HEAHGVFQSLPERDVVVCTAIISGYAQM
Sbjct: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRIHEAHGVFQSLPERDVVVCTAIISGYAQM 240
Query: 302 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 361
GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSL VVLL
Sbjct: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLYVVLL 300
Query: 362 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 421
NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMG EVLELFKLMREENKV
Sbjct: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGREVLELFKLMREENKV 360
Query: 422 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 481
KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEP+IEHYGCVVDLLGRVGRIEEA
Sbjct: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPEIEHYGCVVDLLGRVGRIEEA 420
Query: 482 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 541
FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA
Sbjct: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 480
Query: 542 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI---------------------------- 601
GKWEDMRNIRD+MQEKAVIKEPGRSWVELDQI
Sbjct: 481 GKWEDMRNIRDVMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540
Query: 602 -EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 629
EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLI APEGATIRVIKNLRVCVDCH
Sbjct: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIDAPEGATIRVIKNLRVCVDCH 600
BLAST of Carg01242 vs. NCBI nr
Match:
XP_038903310.1 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Benincasa hispida])
HSP 1 Score: 1018.1 bits (2631), Expect = 3.3e-293
Identity = 511/612 (83.50%), Postives = 537/612 (87.75%), Query Frame = 0
Query: 65 RSFCWYFHVKDLLLSPI--YTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKFE 124
+SFC Y VK LLLSP+ YTFSRQIS+SP PNLKTLCSNGQL EALLQMAILG EMKFE
Sbjct: 4 KSFCLYSQVKHLLLSPVSHYTFSRQISISPLPNLKTLCSNGQLKEALLQMAILGPEMKFE 63
Query: 125 GYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEM 184
GYDTILN+CVS+RAIREGQRVH HMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEM
Sbjct: 64 GYDTILNECVSQRAIREGQRVHTHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEM 123
Query: 185 PLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIGR 244
P RNVVSWTAMISAYSQRGFA +ALNLFV MLRS G LGFE GR
Sbjct: 124 PQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNEFTFATILTSCVGSLGFETGR 183
Query: 245 QIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMG 304
QIHSI IKRNYESHMFVGSSLLDMYAKSGR+H+AHGVF LPERDVV CTAIISGYAQMG
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRIHDAHGVFHCLPERDVVACTAIISGYAQMG 243
Query: 305 LDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLN 364
LD EALKLFRQLQ+EGM+SNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQS VVLLN
Sbjct: 244 LDEEALKLFRQLQTEGMNSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSSYVVLLN 303
Query: 365 SLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVK 424
SLIDMYSKCGNVCYARRIFD M ERTCISWNAML+GYSKHGMG EVLELFKLMREENKVK
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLIGYSKHGMGREVLELFKLMREENKVK 363
Query: 425 PDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAF 484
PDSITYLAVLSGCSHGQLE +GLEIFYNMA+GKDGIEPDIEHYGCVVDLLGRVGRIEEAF
Sbjct: 364 PDSITYLAVLSGCSHGQLEDRGLEIFYNMANGKDGIEPDIEHYGCVVDLLGRVGRIEEAF 423
Query: 485 DFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAG 544
DFI+K+P+VPTAAIWG+LLGSCRVHSNV+IGIIVGQKLLEIEPENAGNYVILS+LYASAG
Sbjct: 424 DFIKKIPFVPTAAIWGTLLGSCRVHSNVEIGIIVGQKLLEIEPENAGNYVILSHLYASAG 483
Query: 545 KWEDMRNIRDLMQEKAVIKEPGRSWVELDQI----------------------------- 604
KWED+RNIRDLMQEK VIKEPGRSWVELDQ+
Sbjct: 484 KWEDVRNIRDLMQEKTVIKEPGRSWVELDQVVHTFHASDHTHPRREEVAKKVKELSIKFK 543
Query: 605 EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHS 629
E+GYVP+LSCVLYDVDEEQKEKVLLGHSEKLA+AF LIA PEGATIR+IKNLR+CVDCHS
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGATIRIIKNLRICVDCHS 603
BLAST of Carg01242 vs. ExPASy Swiss-Prot
Match:
Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)
HSP 1 Score: 741.9 bits (1914), Expect = 6.0e-213
Identity = 362/578 (62.63%), Postives = 440/578 (76.12%), Query Frame = 0
Query: 96 LKTLCSNGQLNEALLQMAILGSEMKFEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPP 155
+ LCSNG+L EALL+MA+LG EM F GYD +LN C+ +RA+R+GQRVHAHMIKT YLP
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 156 VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLR 215
YLRTRL++ Y KCDCL DAR+V DEMP +NVVSWTAMIS YSQ G +S+AL +F M+R
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 216 S--------------GCL---GFEIGRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHE 275
S C+ G +G+QIH +++K NY+SH+FVGSSLLDMYAK+G++ E
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 276 AHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVLTALSG 335
A +F+ LPERDVV CTAII+GYAQ+GLD EAL++F +L SEGM NYVTYAS+LTALSG
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 336 LAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAM 395
LA L+HGKQ H HVLR VL NSLIDMYSKCGN+ YARR+FD+M ERT ISWNAM
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 396 LVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGK 455
LVGYSKHG+G EVLELF+LMR+E +VKPD++T LAVLSGCSHG++E GL IF M G+
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 456 DGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGII 515
G +P EHYGC+VD+LGR GRI+EAF+FI++MP PTA + GSLLG+CRVH +VDIG
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 516 VGQKLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI-- 575
VG++L+EIEPENAGNYVILSNLYASAG+W D+ N+R +M +KAV KEPGRSW++ +Q
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 576 ---------------------------EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAM 628
+ GYVP+LSCVLYDVDEEQKEK+LLGHSEKLA+
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLAL 566
BLAST of Carg01242 vs. ExPASy Swiss-Prot
Match:
Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)
HSP 1 Score: 398.7 bits (1023), Expect = 1.2e-109
Identity = 215/616 (34.90%), Postives = 346/616 (56.17%), Query Frame = 0
Query: 60 LNMLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEM 119
+N LPRS L +P + +S + +++LC G+L +A+ ++ S
Sbjct: 17 VNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPS 76
Query: 120 KFEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVF 179
+ + Y+ ++ C R ++ + RVH H++ +L T+LI +Y+ + AR+VF
Sbjct: 77 Q-QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 136
Query: 180 DEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSG--------------CLGFEI-- 239
D+ R + W A+ A + G + L L+ M R G C+ E
Sbjct: 137 DKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 196
Query: 240 -----GRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAII 299
G++IH+ + +R Y SH+++ ++L+DMYA+ G V A VF +P R+VV +A+I
Sbjct: 197 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 256
Query: 300 SGYAQMGLDVEALKLFRQLQSEGMHS--NYVTYASVLTALSGLAALNHGKQVHNHVLRSG 359
+ YA+ G EAL+ FR++ E S N VT SVL A + LAAL GK +H ++LR G
Sbjct: 257 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG 316
Query: 360 QSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFK 419
+ ++++L+ MY +CG + +R+FD M +R +SWN+++ Y HG G + +++F+
Sbjct: 317 LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFE 376
Query: 420 LMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLG 479
M N P +T+++VL CSH L +G +F M GI+P IEHY C+VDLLG
Sbjct: 377 EML-ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMW-RDHGIKPQIEHYACMVDLLG 436
Query: 480 RVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVI 539
R R++EA ++ M P +WGSLLGSCR+H NV++ ++L +EP+NAGNYV+
Sbjct: 437 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 496
Query: 540 LSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRSWVEL----------------------- 599
L+++YA A W++++ ++ L++ + + K PGR W+E+
Sbjct: 497 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 556
Query: 600 ------DQIEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKN 624
D E+GY+P VLY+++ E+KE+++LGHSEKLA+AF LI +G IR+ KN
Sbjct: 557 LVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKN 616
BLAST of Carg01242 vs. ExPASy Swiss-Prot
Match:
Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)
HSP 1 Score: 396.4 bits (1017), Expect = 6.2e-109
Identity = 223/587 (37.99%), Postives = 331/587 (56.39%), Query Frame = 0
Query: 99 LCSNGQLNEALL---QMAILGSEMKFEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPP 158
L +G EALL M L + + C S I G++ H Y
Sbjct: 51 LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSD 110
Query: 159 VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAML- 218
+++ + LIV+Y+ C L DAR+VFDE+P RN+VSWT+MI Y G A A++LF +L
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLV 170
Query: 219 -------------------RSGCLGFE---IGRQIHSIVIKRNYESHMFVGSSLLDMYAK 278
S C + IHS VIKR ++ + VG++LLD YAK
Sbjct: 171 DENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAK 230
Query: 279 SGR--VHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQL-QSEGMHSNYVTY 338
G V A +F + ++D V +I+S YAQ G+ EA ++FR+L +++ + N +T
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITL 290
Query: 339 ASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSE 398
++VL A+S AL GK +H+ V+R G +V++ S+IDMY KCG V AR+ FD M
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 399 RTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLE 458
+ SW AM+ GY HG + LELF M + V+P+ IT+++VL+ CSH L +G
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGLHVEGWR 410
Query: 459 IFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRV 518
++N G+ G+EP +EHYGC+VDLLGR G +++A+D I++M P + IW SLL +CR+
Sbjct: 411 -WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRI 470
Query: 519 HSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRS 578
H NV++ I +L E++ N G Y++LS++YA AG+W+D+ +R +M+ + ++K PG S
Sbjct: 471 HKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS 530
Query: 579 WVELD-----------------------------QIEEGYVPNLSCVLYDVDEEQKEKVL 628
+EL+ +E GYV N S V +DVDEE+KE L
Sbjct: 531 LLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTL 590
BLAST of Carg01242 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 394.4 bits (1012), Expect = 2.4e-108
Identity = 206/550 (37.45%), Postives = 320/550 (58.18%), Query Frame = 0
Query: 124 YDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMP 183
Y+T+L +C + + +G+ VHAH++++ + + + L+ +Y KC L +AR+VF++MP
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 184 LRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGCLGFEI-----------------GRQ 243
R+ V+WT +IS YSQ AL F MLR G E G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 244 IHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGL 303
+H +K ++S++ VGS+LLD+Y + G + +A VF +L R+ V A+I+G+A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 304 DVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNS 363
+AL+LF+ + +G ++ +YAS+ A S L GK VH ++++SG+ L N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 364 LIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKP 423
L+DMY+K G++ AR+IFD +++R +SWN++L Y++HG G E + F+ MR ++P
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IRP 362
Query: 424 DSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFD 483
+ I++L+VL+ CSH L +G + M KDGI P+ HY VVDLLGR G + A
Sbjct: 363 NEISFLSVLTACSHSGLLDEGWHYYELMK--KDGIVPEAWHYVTVVDLLGRAGDLNRALR 422
Query: 484 FIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGK 543
FI +MP PTAAIW +LL +CR+H N ++G + + E++P++ G +VIL N+YAS G+
Sbjct: 423 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 482
Query: 544 WEDMRNIRDLMQEKAVIKEPGRSWVELDQI-----------------------------E 603
W D +R M+E V KEP SWVE++ E
Sbjct: 483 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 542
Query: 604 EGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSF 628
GYVP+ S V+ VD++++E L HSEK+A+AF L+ P G+TI + KN+RVC DCH+
Sbjct: 543 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 602
BLAST of Carg01242 vs. ExPASy Swiss-Prot
Match:
Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)
HSP 1 Score: 388.7 bits (997), Expect = 1.3e-106
Identity = 219/576 (38.02%), Postives = 320/576 (55.56%), Query Frame = 0
Query: 99 LCSNGQLNEALLQMAILGSEMKFEG---YDTILNQCVSRRAIREGQRVHAHMIKTCYLPP 158
LC L A+ M L S + Y ++ C+S RA+ EG + H+ + P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 159 VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLR 218
++L LI +Y K + L DA ++FD+MP RNV+SWT MISAYS+ +AL L V MLR
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 219 S--------------GCLGFEIGRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHG 278
C G R +H +IK ES +FV S+L+D++AK G +A
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 279 VFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAA 338
VF + D +V +II G+AQ AL+LF++++ G + T SVL A +GLA
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 339 LNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVG 398
L G Q H H+++ Q L +L N+L+DMY KCG++ A R+F+ M ER I+W+ M+ G
Sbjct: 276 LELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 335
Query: 399 YSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGI 458
+++G E L+LF+ M+ KP+ IT + VL CSH L G F +M GI
Sbjct: 336 LAQNGYSQEALKLFERMKSSG-TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK-LYGI 395
Query: 459 EPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQ 518
+P EHYGC++DLLG+ G++++A + +M P A W +LLG+CRV N+ + +
Sbjct: 396 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 455
Query: 519 KLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRSWVELD------- 578
K++ ++PE+AG Y +LSN+YA++ KW+ + IR M+++ + KEPG SW+E++
Sbjct: 456 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 515
Query: 579 -------QIEE---------------GYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFW 629
QI E GYVP + VL D++ EQ E L HSEKLA+AF
Sbjct: 516 IGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFG 575
BLAST of Carg01242 vs. ExPASy TrEMBL
Match:
A0A6J1ETZ1 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437677 PE=3 SV=1)
HSP 1 Score: 1106.3 bits (2860), Expect = 0.0e+00
Identity = 558/613 (91.03%), Postives = 563/613 (91.84%), Query Frame = 0
Query: 62 MLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 121
ML RSFC YFHVKDLLLSPIYTFSR+IS+SPS NLKTLCSNGQLNEALLQMAILGSEMKF
Sbjct: 1 MLLRSFCLYFHVKDLLLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKF 60
Query: 122 EGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 181
EGYDTILNQCVS+RAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE
Sbjct: 61 EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 120
Query: 182 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIG 241
MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS G LGF+IG
Sbjct: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIG 180
Query: 242 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 301
RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM
Sbjct: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 240
Query: 302 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 361
GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL
Sbjct: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 300
Query: 362 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 421
NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV
Sbjct: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 360
Query: 422 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 481
KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA
Sbjct: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 420
Query: 482 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 541
FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNL+ASA
Sbjct: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASA 480
Query: 542 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI---------------------------- 601
GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI
Sbjct: 481 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540
Query: 602 -EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 629
EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH
Sbjct: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 600
BLAST of Carg01242 vs. ExPASy TrEMBL
Match:
A0A6J1I7X7 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111470004 PE=3 SV=1)
HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 554/613 (90.38%), Postives = 560/613 (91.35%), Query Frame = 0
Query: 62 MLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 121
ML RSFC YFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF
Sbjct: 1 MLRRSFCLYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 60
Query: 122 EGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 181
EGYDTILNQCVS+RAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKC+CLGDAREVFDE
Sbjct: 61 EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCECLGDAREVFDE 120
Query: 182 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIG 241
MPLRNVVSWTAMISAYSQRGFASQALNLFV MLRS G LGF+IG
Sbjct: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVEMLRSGTEPNEFTFATILTSCIGSLGFKIG 180
Query: 242 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 301
RQIHSIVIKRNYESHMFVGSSLLDMYAKSGR+HEAHGVFQSLPERDVVVCTAIISGYAQM
Sbjct: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRIHEAHGVFQSLPERDVVVCTAIISGYAQM 240
Query: 302 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 361
GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSL VVLL
Sbjct: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLYVVLL 300
Query: 362 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 421
NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMG EVLELFKLMREENKV
Sbjct: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGREVLELFKLMREENKV 360
Query: 422 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 481
KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEP+IEHYGCVVDLLGRVGRIEEA
Sbjct: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPEIEHYGCVVDLLGRVGRIEEA 420
Query: 482 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 541
FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA
Sbjct: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 480
Query: 542 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI---------------------------- 601
GKWEDMRNIRD+MQEKAVIKEPGRSWVELDQI
Sbjct: 481 GKWEDMRNIRDVMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540
Query: 602 -EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 629
EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLI APEGATIRVIKNLRVCVDCH
Sbjct: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIDAPEGATIRVIKNLRVCVDCH 600
BLAST of Carg01242 vs. ExPASy TrEMBL
Match:
A0A5A7TNQ9 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005710 PE=3 SV=1)
HSP 1 Score: 991.9 bits (2563), Expect = 1.2e-285
Identity = 501/612 (81.86%), Postives = 525/612 (85.78%), Query Frame = 0
Query: 65 RSFCWYFHVKDLLLSPI--YTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKFE 124
+SFC Y HV+ L LSP+ YTFSRQISLSPSPNLKTLCS+GQL EALLQMAILG E+KFE
Sbjct: 4 KSFCVYSHVRHLFLSPVSQYTFSRQISLSPSPNLKTLCSSGQLTEALLQMAILGPEVKFE 63
Query: 125 GYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEM 184
GYDTILN+CVS+RAIREGQRVH HMIKTCYLP VYLRTRLIVLYNKCDCLGDARE+FDEM
Sbjct: 64 GYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEM 123
Query: 185 PLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIGR 244
P RNVVSWTAMISAYSQRGFA +ALNLFV MLRS G LGFE GR
Sbjct: 124 PQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 183
Query: 245 QIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMG 304
QIHSI IKRNYESHMFVGSSLLDMYAKSGR+ +AHGVF LPERDVV CTAIISGYAQMG
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRIRDAHGVFHCLPERDVVACTAIISGYAQMG 243
Query: 305 LDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLN 364
LD EALKLFRQLQ EGM+SN VTYASVLTALSGLAALNHGKQVH+HVLRSGQ VVLLN
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQCSYVVLLN 303
Query: 365 SLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVK 424
SLIDMYSKCGNVCYARRIFD M ERTCISWNAMLVGYSKHGM EVLELFKLMREENKVK
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363
Query: 425 PDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAF 484
PDSITYLAVLSGCSHGQLE GLEIFYNM +GKDGIEPD+ HYGCVVDLLGR GR+EEAF
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDMGHYGCVVDLLGRAGRVEEAF 423
Query: 485 DFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAG 544
DFI+KMP+VP A IWGSLLGSCRVHSNV+IGIIVGQKLLE+EPENAGNYVILSNLYASAG
Sbjct: 424 DFIKKMPFVPAAPIWGSLLGSCRVHSNVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483
Query: 545 KWEDMRNIRDLMQEKAVIKEPGRSWVELDQI----------------------------- 604
KWEDMRNIRDLMQEKAV KEPGRSWVELDQI
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFK 543
Query: 605 EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHS 629
E+GYVP+LSCVLYDVDEEQKEKVLLGHSEKLA+AF LIA PEG TIRVIKNLR+CVDCHS
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 603
BLAST of Carg01242 vs. ExPASy TrEMBL
Match:
A0A1S3B6T6 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486794 PE=3 SV=1)
HSP 1 Score: 991.9 bits (2563), Expect = 1.2e-285
Identity = 501/612 (81.86%), Postives = 525/612 (85.78%), Query Frame = 0
Query: 65 RSFCWYFHVKDLLLSPI--YTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKFE 124
+SFC Y HV+ L LSP+ YTFSRQISLSPSPNLKTLCS+GQL EALLQMAILG E+KFE
Sbjct: 4 KSFCVYSHVRHLFLSPVSQYTFSRQISLSPSPNLKTLCSSGQLTEALLQMAILGPEVKFE 63
Query: 125 GYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEM 184
GYDTILN+CVS+RAIREGQRVH HMIKTCYLP VYLRTRLIVLYNKCDCLGDARE+FDEM
Sbjct: 64 GYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEM 123
Query: 185 PLRNVVSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIGR 244
P RNVVSWTAMISAYSQRGFA +ALNLFV MLRS G LGFE GR
Sbjct: 124 PQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 183
Query: 245 QIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMG 304
QIHSI IKRNYESHMFVGSSLLDMYAKSGR+ +AHGVF LPERDVV CTAIISGYAQMG
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRIRDAHGVFHCLPERDVVACTAIISGYAQMG 243
Query: 305 LDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLN 364
LD EALKLFRQLQ EGM+SN VTYASVLTALSGLAALNHGKQVH+HVLRSGQ VVLLN
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQCSYVVLLN 303
Query: 365 SLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVK 424
SLIDMYSKCGNVCYARRIFD M ERTCISWNAMLVGYSKHGM EVLELFKLMREENKVK
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363
Query: 425 PDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAF 484
PDSITYLAVLSGCSHGQLE GLEIFYNM +GKDGIEPD+ HYGCVVDLLGR GR+EEAF
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDMGHYGCVVDLLGRAGRVEEAF 423
Query: 485 DFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAG 544
DFI+KMP+VP A IWGSLLGSCRVHSNV+IGIIVGQKLLE+EPENAGNYVILSNLYASAG
Sbjct: 424 DFIKKMPFVPAAPIWGSLLGSCRVHSNVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483
Query: 545 KWEDMRNIRDLMQEKAVIKEPGRSWVELDQI----------------------------- 604
KWEDMRNIRDLMQEKAV KEPGRSWVELDQI
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFK 543
Query: 605 EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHS 629
E+GYVP+LSCVLYDVDEEQKEKVLLGHSEKLA+AF LIA PEG TIRVIKNLR+CVDCHS
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 603
BLAST of Carg01242 vs. ExPASy TrEMBL
Match:
A0A6J1DLD3 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021523 PE=3 SV=1)
HSP 1 Score: 976.5 bits (2523), Expect = 5.4e-281
Identity = 488/607 (80.40%), Postives = 525/607 (86.49%), Query Frame = 0
Query: 70 YFHVKDLLLSPI--YTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKFEGYDTI 129
Y + K + S + Y+F+RQ+SLS SPNLKTLCSNG+ EALLQMAILG+EMKFEGYDTI
Sbjct: 9 YSNGKQIFFSSVSHYSFTRQLSLSSSPNLKTLCSNGEFKEALLQMAILGAEMKFEGYDTI 68
Query: 130 LNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNV 189
LN+CVS+RA REGQRVHAHMIKTCYLPPVYLRTRL+VLYNKC CLG+AR+VFDEMP RNV
Sbjct: 69 LNECVSQRATREGQRVHAHMIKTCYLPPVYLRTRLLVLYNKCGCLGEARKVFDEMPQRNV 128
Query: 190 VSWTAMISAYSQRGFASQALNLFVAMLRS-----------------GCLGFEIGRQIHSI 249
VSWTAMISAYSQRGFAS+ALNLFV M+RS G LG+EIGRQ+HSI
Sbjct: 129 VSWTAMISAYSQRGFASEALNLFVGMIRSGTEPNEFTFATILTSCIGSLGYEIGRQVHSI 188
Query: 250 VIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEA 309
IKRNYESHMFVGSSLLDMYAKSGR+HEAHGVF+ LPERDVVVCTAIISGYAQMGLD EA
Sbjct: 189 AIKRNYESHMFVGSSLLDMYAKSGRIHEAHGVFRYLPERDVVVCTAIISGYAQMGLDEEA 248
Query: 310 LKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDM 369
L LFRQLQSEGM SNYVTYAS+LTALSGLAALNHGKQVHNHVLR GQS VVLLNSLIDM
Sbjct: 249 LGLFRQLQSEGMKSNYVTYASILTALSGLAALNHGKQVHNHVLRLGQSSYVVLLNSLIDM 308
Query: 370 YSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSIT 429
YSKCGNVCYARRIFD M ERTCISWNAMLVGYSKHGMG +VLELFKLMREENKVKPDSIT
Sbjct: 309 YSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMGNDVLELFKLMREENKVKPDSIT 368
Query: 430 YLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRK 489
+LAVLSGCSHG+LE +GLEIFYNMADG DG+EPDI HYGCVVDLLGR GR++EAFDFI+K
Sbjct: 369 FLAVLSGCSHGKLEDRGLEIFYNMADGVDGVEPDIGHYGCVVDLLGRAGRVKEAFDFIKK 428
Query: 490 MPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGKWEDM 549
MP+VPTAAIWGSLLGSCRVH NVDIGIIVGQ+LLEIEPENAGNYVILSNLYASAG+WEDM
Sbjct: 429 MPFVPTAAIWGSLLGSCRVHLNVDIGIIVGQQLLEIEPENAGNYVILSNLYASAGRWEDM 488
Query: 550 RNIRDLMQEKAVIKEPGRSWVELDQI-----------------------------EEGYV 609
RNIRD MQEKAVIKEPGRSWVELDQ+ E+GYV
Sbjct: 489 RNIRDSMQEKAVIKEPGRSWVELDQVVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYV 548
Query: 610 PNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFV 629
P+LSCVLYDVD+EQKEKVLLGHSEKLA+AF LIA P+ ATIRVIKNLRVCVDCHSFAKFV
Sbjct: 549 PDLSCVLYDVDDEQKEKVLLGHSEKLALAFGLIATPDRATIRVIKNLRVCVDCHSFAKFV 608
BLAST of Carg01242 vs. TAIR 10
Match:
AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 741.9 bits (1914), Expect = 4.3e-214
Identity = 362/578 (62.63%), Postives = 440/578 (76.12%), Query Frame = 0
Query: 96 LKTLCSNGQLNEALLQMAILGSEMKFEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPP 155
+ LCSNG+L EALL+MA+LG EM F GYD +LN C+ +RA+R+GQRVHAHMIKT YLP
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 156 VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLR 215
YLRTRL++ Y KCDCL DAR+V DEMP +NVVSWTAMIS YSQ G +S+AL +F M+R
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 216 S--------------GCL---GFEIGRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHE 275
S C+ G +G+QIH +++K NY+SH+FVGSSLLDMYAK+G++ E
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 276 AHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVLTALSG 335
A +F+ LPERDVV CTAII+GYAQ+GLD EAL++F +L SEGM NYVTYAS+LTALSG
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 336 LAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAM 395
LA L+HGKQ H HVLR VL NSLIDMYSKCGN+ YARR+FD+M ERT ISWNAM
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 396 LVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGK 455
LVGYSKHG+G EVLELF+LMR+E +VKPD++T LAVLSGCSHG++E GL IF M G+
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 456 DGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGII 515
G +P EHYGC+VD+LGR GRI+EAF+FI++MP PTA + GSLLG+CRVH +VDIG
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 516 VGQKLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRSWVELDQI-- 575
VG++L+EIEPENAGNYVILSNLYASAG+W D+ N+R +M +KAV KEPGRSW++ +Q
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 576 ---------------------------EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAM 628
+ GYVP+LSCVLYDVDEEQKEK+LLGHSEKLA+
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLAL 566
BLAST of Carg01242 vs. TAIR 10
Match:
AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 398.7 bits (1023), Expect = 8.9e-111
Identity = 215/616 (34.90%), Postives = 346/616 (56.17%), Query Frame = 0
Query: 60 LNMLPRSFCWYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEM 119
+N LPRS L +P + +S + +++LC G+L +A+ ++ S
Sbjct: 17 VNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPS 76
Query: 120 KFEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVF 179
+ + Y+ ++ C R ++ + RVH H++ +L T+LI +Y+ + AR+VF
Sbjct: 77 Q-QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 136
Query: 180 DEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSG--------------CLGFEI-- 239
D+ R + W A+ A + G + L L+ M R G C+ E
Sbjct: 137 DKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 196
Query: 240 -----GRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAII 299
G++IH+ + +R Y SH+++ ++L+DMYA+ G V A VF +P R+VV +A+I
Sbjct: 197 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 256
Query: 300 SGYAQMGLDVEALKLFRQLQSEGMHS--NYVTYASVLTALSGLAALNHGKQVHNHVLRSG 359
+ YA+ G EAL+ FR++ E S N VT SVL A + LAAL GK +H ++LR G
Sbjct: 257 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG 316
Query: 360 QSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFK 419
+ ++++L+ MY +CG + +R+FD M +R +SWN+++ Y HG G + +++F+
Sbjct: 317 LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFE 376
Query: 420 LMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLG 479
M N P +T+++VL CSH L +G +F M GI+P IEHY C+VDLLG
Sbjct: 377 EML-ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMW-RDHGIKPQIEHYACMVDLLG 436
Query: 480 RVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVI 539
R R++EA ++ M P +WGSLLGSCR+H NV++ ++L +EP+NAGNYV+
Sbjct: 437 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 496
Query: 540 LSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRSWVEL----------------------- 599
L+++YA A W++++ ++ L++ + + K PGR W+E+
Sbjct: 497 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 556
Query: 600 ------DQIEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKN 624
D E+GY+P VLY+++ E+KE+++LGHSEKLA+AF LI +G IR+ KN
Sbjct: 557 LVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKN 616
BLAST of Carg01242 vs. TAIR 10
Match:
AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 396.4 bits (1017), Expect = 4.4e-110
Identity = 223/587 (37.99%), Postives = 331/587 (56.39%), Query Frame = 0
Query: 99 LCSNGQLNEALL---QMAILGSEMKFEGYDTILNQCVSRRAIREGQRVHAHMIKTCYLPP 158
L +G EALL M L + + C S I G++ H Y
Sbjct: 51 LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSD 110
Query: 159 VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAML- 218
+++ + LIV+Y+ C L DAR+VFDE+P RN+VSWT+MI Y G A A++LF +L
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLV 170
Query: 219 -------------------RSGCLGFE---IGRQIHSIVIKRNYESHMFVGSSLLDMYAK 278
S C + IHS VIKR ++ + VG++LLD YAK
Sbjct: 171 DENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAK 230
Query: 279 SGR--VHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQL-QSEGMHSNYVTY 338
G V A +F + ++D V +I+S YAQ G+ EA ++FR+L +++ + N +T
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITL 290
Query: 339 ASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSE 398
++VL A+S AL GK +H+ V+R G +V++ S+IDMY KCG V AR+ FD M
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 399 RTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLE 458
+ SW AM+ GY HG + LELF M + V+P+ IT+++VL+ CSH L +G
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGLHVEGWR 410
Query: 459 IFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRV 518
++N G+ G+EP +EHYGC+VDLLGR G +++A+D I++M P + IW SLL +CR+
Sbjct: 411 -WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRI 470
Query: 519 HSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRS 578
H NV++ I +L E++ N G Y++LS++YA AG+W+D+ +R +M+ + ++K PG S
Sbjct: 471 HKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS 530
Query: 579 WVELD-----------------------------QIEEGYVPNLSCVLYDVDEEQKEKVL 628
+EL+ +E GYV N S V +DVDEE+KE L
Sbjct: 531 LLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTL 590
BLAST of Carg01242 vs. TAIR 10
Match:
AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 394.4 bits (1012), Expect = 1.7e-109
Identity = 206/550 (37.45%), Postives = 320/550 (58.18%), Query Frame = 0
Query: 124 YDTILNQCVSRRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMP 183
Y+T+L +C + + +G+ VHAH++++ + + + L+ +Y KC L +AR+VF++MP
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 184 LRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGCLGFEI-----------------GRQ 243
R+ V+WT +IS YSQ AL F MLR G E G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 244 IHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGL 303
+H +K ++S++ VGS+LLD+Y + G + +A VF +L R+ V A+I+G+A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 304 DVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNS 363
+AL+LF+ + +G ++ +YAS+ A S L GK VH ++++SG+ L N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 364 LIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKP 423
L+DMY+K G++ AR+IFD +++R +SWN++L Y++HG G E + F+ MR ++P
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IRP 362
Query: 424 DSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFD 483
+ I++L+VL+ CSH L +G + M KDGI P+ HY VVDLLGR G + A
Sbjct: 363 NEISFLSVLTACSHSGLLDEGWHYYELMK--KDGIVPEAWHYVTVVDLLGRAGDLNRALR 422
Query: 484 FIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASAGK 543
FI +MP PTAAIW +LL +CR+H N ++G + + E++P++ G +VIL N+YAS G+
Sbjct: 423 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 482
Query: 544 WEDMRNIRDLMQEKAVIKEPGRSWVELDQI-----------------------------E 603
W D +R M+E V KEP SWVE++ E
Sbjct: 483 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 542
Query: 604 EGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSF 628
GYVP+ S V+ VD++++E L HSEK+A+AF L+ P G+TI + KN+RVC DCH+
Sbjct: 543 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 602
BLAST of Carg01242 vs. TAIR 10
Match:
AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 388.7 bits (997), Expect = 9.2e-108
Identity = 219/576 (38.02%), Postives = 320/576 (55.56%), Query Frame = 0
Query: 99 LCSNGQLNEALLQMAILGSEMKFEG---YDTILNQCVSRRAIREGQRVHAHMIKTCYLPP 158
LC L A+ M L S + Y ++ C+S RA+ EG + H+ + P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 159 VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLR 218
++L LI +Y K + L DA ++FD+MP RNV+SWT MISAYS+ +AL L V MLR
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 219 S--------------GCLGFEIGRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHG 278
C G R +H +IK ES +FV S+L+D++AK G +A
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 279 VFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAA 338
VF + D +V +II G+AQ AL+LF++++ G + T SVL A +GLA
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 339 LNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVG 398
L G Q H H+++ Q L +L N+L+DMY KCG++ A R+F+ M ER I+W+ M+ G
Sbjct: 276 LELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 335
Query: 399 YSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGI 458
+++G E L+LF+ M+ KP+ IT + VL CSH L G F +M GI
Sbjct: 336 LAQNGYSQEALKLFERMKSSG-TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK-LYGI 395
Query: 459 EPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQ 518
+P EHYGC++DLLG+ G++++A + +M P A W +LLG+CRV N+ + +
Sbjct: 396 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 455
Query: 519 KLLEIEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVIKEPGRSWVELD------- 578
K++ ++PE+AG Y +LSN+YA++ KW+ + IR M+++ + KEPG SW+E++
Sbjct: 456 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 515
Query: 579 -------QIEE---------------GYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFW 629
QI E GYVP + VL D++ EQ E L HSEKLA+AF
Sbjct: 516 IGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFG 575
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7027763.1 | 0.0e+00 | 100.00 | putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cu... | [more] |
XP_022931556.1 | 0.0e+00 | 91.03 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [C... | [more] |
XP_023538799.1 | 0.0e+00 | 90.70 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [C... | [more] |
XP_022971213.1 | 0.0e+00 | 90.38 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [C... | [more] |
XP_038903310.1 | 3.3e-293 | 83.50 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [B... | [more] |
Match Name | E-value | Identity | Description | |
Q9LIC3 | 6.0e-213 | 62.63 | Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... | [more] |
Q9STF3 | 1.2e-109 | 34.90 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
Q9LW32 | 6.2e-109 | 37.99 | Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... | [more] |
Q9LIQ7 | 2.4e-108 | 37.45 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Q9SI53 | 1.3e-106 | 38.02 | Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ETZ1 | 0.0e+00 | 91.03 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... | [more] |
A0A6J1I7X7 | 0.0e+00 | 90.38 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... | [more] |
A0A5A7TNQ9 | 1.2e-285 | 81.86 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A1S3B6T6 | 1.2e-285 | 81.86 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... | [more] |
A0A6J1DLD3 | 5.4e-281 | 80.40 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... | [more] |
Match Name | E-value | Identity | Description | |
AT3G13770.1 | 4.3e-214 | 62.63 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G46790.1 | 8.9e-111 | 34.90 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G26782.1 | 4.4e-110 | 37.99 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G24000.1 | 1.7e-109 | 37.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G03880.1 | 9.2e-108 | 38.02 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |