Carg01240 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01240
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pectin lyase-like superfamily protein
Location	Carg_Chr06: 448778 .. 450549 (-)
RNA-Seq Expression	Carg01240
Synteny	Carg01240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGAATCAACAACATCCAATGGCAATTCTATTCTTTTTCTTCTCTCTCATCATCCATTCACACTGCGTTGTTCCCTCGATCAGACTTCCCGGCGGATCCACATCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAGTCCGCTATTAACAGCTGCCCCTCGCCGGTCCGCTGCTACGTTATATTCCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTGGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTTGAGATCACCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGGTGCGTGCGACTCTCTGCCTCTCTCCCTCTCTCCCTCTCTCTTACATAATTACTGCATTTCTCTAAGTGAAATTTGATGCAGCTTGCACCTGGTTCGATGCGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACCGGAGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGGTCAGTTTTTCATTCCCTTCTTAGTTGTGATGCTCAAACTTTAGTCTTTTTGGAGACATTATATATAAACAGTTTTCTGCTTTTTAGAACAAGATTTCAACTTTTTAGAAGTGGGGCTAGAGCAAAATACAGAAATTCAGACAAATGAAACCTATTTTTATATTACCAACTTGAAGATAATTCGATTAGTTTAGACATTTTCTCAACCAAAAGGTCGAAATGGTTTGAATCTCCACTCCTTTCCTATCCCATTAAGAAATTCTGTCTTCATATTCTCCTGTAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAAGTACAAGATATTATGATCCTTCATGGTGGGGAAGAGCAGAGCCAATTTACGTTACGACTTGCCCTAGAGATCCAGGCTCGAAGGAGGGTTCAATCTCAAACATAAACTTCATAAACATCACAGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGGTATGATTATGGAGCACATTGAAGGATTGAGTTTCGAAAATGTTGATATGAAATGGTCTGATGATGATGATGGATCATTACAGTGGAACAATCCTTTGGATTTCAGACCATCAACTGTGAGTAACATCTCTTTCTTCAACTTTCATTCAGGTTATTTAAGAGAATGA

mRNA sequence

ATGAAGATGAATCAACAACATCCAATGGCAATTCTATTCTTTTTCTTCTCTCTCATCATCCATTCACACTGCGTTGTTCCCTCGATCAGACTTCCCGGCGGATCCACATCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAGTCCGCTATTAACAGCTGCCCCTCGCCGGTCCGCTGCTACGTTATATTCCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTGGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTTGAGATCACCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGCTTGCACCTGGTTCGATGCGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACCGGAGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAAGTACAAGATATTATGATCCTTCATGGTGGGGAAGAGCAGAGCCAATTTACGTTACGACTTGCCCTAGAGATCCAGGCTCGAAGGAGGGTTCAATCTCAAACATAAACTTCATAAACATCACAGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGGTATGATTATGGAGCACATTGAAGGATTGAGTTTCGAAAATGTTGATATGAAATGGTCTGATGATGATGATGGATCATTACAGTGGAACAATCCTTTGGATTTCAGACCATCAACTGTGAGTAACATCTCTTTCTTCAACTTTCATTCAGGTTATTTAAGAGAATGA

Coding sequence (CDS)

ATGAAGATGAATCAACAACATCCAATGGCAATTCTATTCTTTTTCTTCTCTCTCATCATCCATTCACACTGCGTTGTTCCCTCGATCAGACTTCCCGGCGGATCCACATCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAGTCCGCTATTAACAGCTGCCCCTCGCCGGTCCGCTGCTACGTTATATTCCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTGGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTTGAGATCACCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGCTTGCACCTGGTTCGATGCGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACCGGAGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAAGTACAAGATATTATGATCCTTCATGGTGGGGAAGAGCAGAGCCAATTTACGTTACGACTTGCCCTAGAGATCCAGGCTCGAAGGAGGGTTCAATCTCAAACATAAACTTCATAAACATCACAGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGGTATGATTATGGAGCACATTGAAGGATTGAGTTTCGAAAATGTTGATATGAAATGGTCTGATGATGATGATGGATCATTACAGTGGAACAATCCTTTGGATTTCAGACCATCAACTGTGAGTAACATCTCTTTCTTCAACTTTCATTCAGGTTATTTAAGAGAATGA

Protein sequence

MKMNQQHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE

Homology

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BLAST of Carg01240 vs. NCBI nr
Match: KAG7027765.1 (Exo-poly-alpha-D-galacturonosidase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 981.5 bits (2536), Expect = 2.6e-282
Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 0


Query: 1   MKMNQQHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60
           MKMNQQHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA
Sbjct: 1   MKMNQQHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60

Query: 61  INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120
           INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV
Sbjct: 61  INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120

Query: 121 AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180
           AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV
Sbjct: 121 AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180

Query: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240
           RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG
Sbjct: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240

Query: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300
           DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ
Sbjct: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300

Query: 301 LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360
           LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT
Sbjct: 301 LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360

Query: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420
           SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI
Sbjct: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420

Query: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 469
           EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE
Sbjct: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 468

[Close]

BLAST of Carg01240 vs. NCBI nr
Match: XP_023538800.1 (uncharacterized protein LOC111799618 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 970.7 bits (2508), Expect = 4.5e-279
Identity = 464/468 (99.15%), Postives = 466/468 (99.57%), Query Frame = 0


Query: 1   MKMNQQHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60
           MKMN QHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA
Sbjct: 1   MKMN-QHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60

Query: 61  INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120
           INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV
Sbjct: 61  INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120

Query: 121 AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180
           AENASDVEI+GGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV
Sbjct: 121 AENASDVEISGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180

Query: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240
           RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG
Sbjct: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240

Query: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300
           DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ
Sbjct: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300

Query: 301 LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360
           LRDGGSANDITFSNMN+STRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT
Sbjct: 301 LRDGGSANDITFSNMNVSTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360

Query: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420
           SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI
Sbjct: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420

Query: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 469
           EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISF NFHSGYLRE
Sbjct: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGYLRE 467

[Close]

BLAST of Carg01240 vs. NCBI nr
Match: XP_022931747.1 (uncharacterized protein LOC111437911 [Cucurbita moschata])

HSP 1 Score: 966.8 bits (2498), Expect = 6.5e-278
Identity = 464/468 (99.15%), Postives = 466/468 (99.57%), Query Frame = 0


Query: 1   MKMNQQHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60
           MKMNQ+ PMAILFFFFSLII SHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA
Sbjct: 1   MKMNQR-PMAILFFFFSLIILSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60

Query: 61  INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120
           IN+CPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV
Sbjct: 61  INNCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120

Query: 121 AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180
           AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV
Sbjct: 121 AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180

Query: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240
           RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG
Sbjct: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240

Query: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300
           DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ
Sbjct: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300

Query: 301 LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360
           LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT
Sbjct: 301 LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360

Query: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420
           SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI
Sbjct: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420

Query: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 469
           EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE
Sbjct: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 467

[Close]

BLAST of Carg01240 vs. NCBI nr
Match: XP_022971216.1 (uncharacterized protein LOC111470006 [Cucurbita maxima])

HSP 1 Score: 958.0 bits (2475), Expect = 3.0e-275
Identity = 461/469 (98.29%), Postives = 462/469 (98.51%), Query Frame = 0


Query: 1   MKMNQQHPMAI-LFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQS 60
           MKMN QHPMAI LFFFFSLIIHS CVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQS
Sbjct: 1   MKMN-QHPMAILLFFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQS 60

Query: 61  AINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAV 120
           AINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAV
Sbjct: 61  AINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAV 120

Query: 121 VAENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKN 180
           VAENASDVEI GGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKN
Sbjct: 121 VAENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKN 180

Query: 181 VRVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDT 240
           VRVSNVSLNQPAHWCLHLV CENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDT
Sbjct: 181 VRVSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDT 240

Query: 241 GDDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGF 300
           GDDAICPK SNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGF
Sbjct: 241 GDDAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGF 300

Query: 301 QLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITA 360
           QLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN+NFINITA
Sbjct: 301 QLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITA 360

Query: 361 TSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEH 420
           TSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEH
Sbjct: 361 TSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEH 420

Query: 421 IEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 469
           IEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISF NFHSGYLRE
Sbjct: 421 IEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGYLRE 468

[Close]

BLAST of Carg01240 vs. NCBI nr
Match: KAG6596223.1 (Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 917.5 bits (2370), Expect = 4.5e-263
Identity = 438/440 (99.55%), Postives = 438/440 (99.55%), Query Frame = 0


Query: 30  RLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIWLQSG 89
           RLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIWLQSG
Sbjct: 378 RLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIWLQSG 437

Query: 90  VVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGGGVVDGQGLKFVEKFDKR 149
           VVLDIQPGATVLAGTRMEDYPMDSSRWYAV AENASDVEITGGGVVDGQGLKFVEKFDKR
Sbjct: 438 VVLDIQPGATVLAGTRMEDYPMDSSRWYAVAAENASDVEITGGGVVDGQGLKFVEKFDKR 497

Query: 150 KNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCENTIIEDVS 209
           KNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCENTIIEDVS
Sbjct: 498 KNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCENTIIEDVS 557

Query: 210 IYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATNCWIRTKSSA 269
           IYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATNCWIRTKSSA
Sbjct: 558 IYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATNCWIRTKSSA 617

Query: 270 IKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPSWWGR 329
           IKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPSWWGR
Sbjct: 618 IKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPSWWGR 677

Query: 330 AEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKR 389
           AEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKR
Sbjct: 678 AEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKR 737

Query: 390 WTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWS-DDDDGSLQWNNPLDF 449
           WTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWS DDDDGSLQWNNPLDF
Sbjct: 738 WTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDDGSLQWNNPLDF 797

Query: 450 RPSTVSNISFFNFHSGYLRE 469
           RPSTVSNISFFNFHSGYLRE
Sbjct: 798 RPSTVSNISFFNFHSGYLRE 817

[Close]

BLAST of Carg01240 vs. ExPASy Swiss-Prot
Match: P15922 (Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 7.8e-24
Identity = 89/329 (27.05%), Postives = 151/329 (45.90%), Query Frame = 0


Query: 39  SVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGA 98
           ++T +GA GDG   +T+AIQ AI++CP+   C +  P G + T  +WL+S + L++  GA
Sbjct: 153 NITQYGAKGDGTTLNTSAIQKAIDACPT--GCRIDVPAGVFKTGALWLKSDMTLNLLQGA 212

Query: 99  TVLAGTRMEDYPMDSSRWYAVVAE-------NASD-----------VEITGGGVVDGQGL 158
           T+L      DYP D+ + Y+ V++       NA D           + I G G++DG G 
Sbjct: 213 TLLGSDNAADYP-DAYKIYSYVSQVRPASLLNAIDKNSSAVGTFKNIRIVGKGIIDGNGW 272

Query: 159 K---------------FVEKFDKR--KNVMVSWNKTGACYG---------DECRPDLIGF 218
           K               +V+  + +  K+ +++ N+  A             + R  L+  
Sbjct: 273 KRSADAKDELGNTLPQYVKSDNSKVSKDGILAKNQVAAAVATGMDTKTAYSQRRSSLVTL 332

Query: 219 IGSKNVRVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITR 278
            G +N  +++V++  PA+  +  +  EN ++E+  I+  F+  N DG++  +S N  +  
Sbjct: 333 RGVQNAYIADVTIRNPANHGIMFLESEN-VVENSVIHQTFNANNGDGVEFGNSQNIMVFN 392

Query: 279 CRIDTGDDAICPKTSNG-------PVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDN 315
              DTGDD+I      G       P  N    N + R    A+ LGS +      +L +N
Sbjct: 393 SVFDTGDDSINFAAGMGQDAQKQEPSQNAWLFNNFFRHGHGAVVLGSHTGAGIVDVLAEN 452

[Close]

BLAST of Carg01240 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-18
Identity = 102/388 (26.29%), Postives = 171/388 (44.07%), Query Frame = 0


Query: 28  SIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA-INSCPSPVRCYVIFPPG-TYLTATIW 87
           S+R P   T+ SV+DFGA GDG   DT A  +A   +C S     ++ P G TYL  +I 
Sbjct: 61  SLRTP---TTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQ 120

Query: 88  LQS--GVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGG--GVVDGQGLK 147
           L      +L +Q   T+ A  +  DY  D S+W  ++ +  +++ + GG  GVVDG G  
Sbjct: 121 LTGPCNSILTVQIFGTLSASQKRSDY-KDISKW--IMFDGVNNLSVDGGDTGVVDGNGET 180

Query: 148 FVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCE 207
           + +   KR       NK   C      P  + F  SK++ V N+ +       + + +C 
Sbjct: 181 WWQNSCKR-------NKAKPC---TKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCS 240

Query: 208 NTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATNC 267
           N  + +V +    D+PN DGI I ++ N  ++   I TGDD I  ++ +  V  +    C
Sbjct: 241 NVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNV-QINDITC 300

Query: 268 WIRTKSSAIKLGSASWFNF-TRMLFDNITIVDSHRGLGFQLRDGGS--ANDITFSNMNIS 327
                 S   LG  +   F + +  D   +  +  G+  +   GGS  A++I F N+ + 
Sbjct: 301 GPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMD 360

Query: 328 TRYYDPSWWGRAEPIYVTT--CPRDPGSKEGS---ISNINFINI--TATSENGVFLSGSK 387
                        PI +    C +   + E S   + N+ + +I  T+ SEN +  + SK
Sbjct: 361 ---------NVKNPIIIDQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSK 420

Query: 388 SGVLSNLRFNNVKLTYKRWTKYGGGIAD 400
           +     +  + V +   + T     + D
Sbjct: 421 NYPCQGIVLDRVNIKGGKATCTNANVVD 422

[Close]

BLAST of Carg01240 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.4e-18
Identity = 92/347 (26.51%), Postives = 153/347 (44.09%), Query Frame = 0


Query: 32  PGGSTSFSVTDFGAIGDGVHYDTAAIQSA-INSCPSPVRCYVIFPPGTYLTATIWLQSGV 91
           PGG  SF +T  GA G+G    T A+Q A  ++C    +  ++ P G +L   +      
Sbjct: 37  PGG--SFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPC 96

Query: 92  VLD--IQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGGGVVDGQGLKFVEKFDK 151
             D  IQ    +LA T +  Y  D   W  ++     ++ ITG G +DGQG         
Sbjct: 97  KGDVTIQVDGNLLATTDLSQY-KDHGNWIEIL--RVDNLVITGKGNLDGQG--------- 156

Query: 152 RKNVMVSWNKTGACYGDECR--PDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCENTIIE 211
                  W+K       +C+  P+ +      N  VS V+L     + +++ RC++ +I+
Sbjct: 157 ----PAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIK 216

Query: 212 DVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGPVFNLTATNCWIR 271
           DV++    D+PN DGI + DS+   IT   I  GDD I   P TS     N+T   C   
Sbjct: 217 DVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSK---VNITGVTC--- 276

Query: 272 TKSSAIKLGSASWFNFTRMLFD----NITIVDSHRGLGFQLRDGGSANDITFSNMNISTR 331
                I +GS   +   + + D    + T+  +  G+  +  +  +A+ +T S ++    
Sbjct: 277 GPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE-DAASVLTVSKIHYENI 336

Query: 332 YYDPSWWGRAEPIYVTT--CPRD----PGSKEGSISNINFINITATS 362
             + S    A PI++    CP       G+ + ++ ++ F NIT TS
Sbjct: 337 KMEDS----ANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTS 354

[Close]

BLAST of Carg01240 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-17
Identity = 91/347 (26.22%), Postives = 153/347 (44.09%), Query Frame = 0


Query: 32  PGGSTSFSVTDFGAIGDGVHYDTAAIQSA-INSCPSPVRCYVIFPPGTYLTATIWLQSGV 91
           PGG  SF +T  GA G+G    T A+Q A  ++C    +  ++ P G +L   +      
Sbjct: 37  PGG--SFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPC 96

Query: 92  VLD--IQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGGGVVDGQGLKFVEKFDK 151
             D  IQ    +LA T +  Y  +   W  ++     ++ ITG G +DGQG         
Sbjct: 97  KGDVTIQVDGNLLATTDLSQY-KEHGNWIEIL--RVDNLVITGKGNLDGQG--------- 156

Query: 152 RKNVMVSWNKTGACYGDECR--PDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCENTIIE 211
                  W+K       +C+  P+ +      N  VS V+L     + +++ +C+N +I+
Sbjct: 157 ----PAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIK 216

Query: 212 DVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGPVFNLTATNCWIR 271
           DV++    D+PN DGI + DS+   IT   I  GDD I   P TS     N+T   C   
Sbjct: 217 DVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSK---VNITGVTC--- 276

Query: 272 TKSSAIKLGSASWFNFTRMLFD----NITIVDSHRGLGFQLRDGGSANDITFSNMNISTR 331
                I +GS   +   + + D    + T+  +  G+  +  +  +A+ +T S ++    
Sbjct: 277 GPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE-DAASVLTVSKIHYENI 336

Query: 332 YYDPSWWGRAEPIYVTT--CPRD----PGSKEGSISNINFINITATS 362
             + S    A PI++    CP       G+ + ++ ++ F NIT TS
Sbjct: 337 KMEDS----ANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTS 354

[Close]

BLAST of Carg01240 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-14
Identity = 89/356 (25.00%), Postives = 145/356 (40.73%), Query Frame = 0


Query: 30  RLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAIN-SCPSPVRCYVIFPPGTYLTATIWL-- 89
           R+   S + +V DFGA GDG   DT A + A   +C S     ++ P   YL   I    
Sbjct: 82  RVLDASKTVNVDDFGAKGDG-RDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSG 141

Query: 90  --QSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGGGVVDGQGLKFVE 149
             +SG+ + I    T+ A     DY  D   W  +V ++  ++ + GGG ++G G  + +
Sbjct: 142 PCKSGLTMQIY--GTIEASDDRSDYRKDGRHW--LVFDSVQNLRVEGGGTINGNGKIWWQ 201

Query: 150 KFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRCENTI 209
              K        NK   C   +  P  + F  SK+V V N+ +       +    C N  
Sbjct: 202 NSCKT-------NKALPC---KDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQ 261

Query: 210 IEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATNCWIR 269
             ++ +    ++PN DGI +  + N  I+ C I TGDD  C    NG        N    
Sbjct: 262 ASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDD--CISIVNGS--RKVRVNDITC 321

Query: 270 TKSSAIKLGSASWFNFTRMLFDNIT----IVDSHRGLGFQLRDG--GSANDITFSNMNIS 329
                I +GS  + N    + D +     +  +  G+  +   G  GSA++I F N+ + 
Sbjct: 322 GPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMH 381

Query: 330 TRYYDPSWWGRAEPIYV--TTCPRDPGSKEGS----ISNINFINITATSENGVFLS 369
                        PI +    C +D   +E S    + N+ + NI  T  + V ++
Sbjct: 382 ---------NVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAIT 409

[Close]

BLAST of Carg01240 vs. ExPASy TrEMBL
Match: A0A6J1EUK0 (uncharacterized protein LOC111437911 OS=Cucurbita moschata OX=3662 GN=LOC111437911 PE=3 SV=1)

HSP 1 Score: 966.8 bits (2498), Expect = 3.2e-278
Identity = 464/468 (99.15%), Postives = 466/468 (99.57%), Query Frame = 0


Query: 1   MKMNQQHPMAILFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60
           MKMNQ+ PMAILFFFFSLII SHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA
Sbjct: 1   MKMNQR-PMAILFFFFSLIILSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA 60

Query: 61  INSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120
           IN+CPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV
Sbjct: 61  INNCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVV 120

Query: 121 AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180
           AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV
Sbjct: 121 AENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNV 180

Query: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240
           RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG
Sbjct: 181 RVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTG 240

Query: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300
           DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ
Sbjct: 241 DDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQ 300

Query: 301 LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360
           LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT
Sbjct: 301 LRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITAT 360

Query: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420
           SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI
Sbjct: 361 SENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHI 420

Query: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 469
           EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE
Sbjct: 421 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 467

[Close]

BLAST of Carg01240 vs. ExPASy TrEMBL
Match: A0A6J1I2Q7 (uncharacterized protein LOC111470006 OS=Cucurbita maxima OX=3661 GN=LOC111470006 PE=3 SV=1)

HSP 1 Score: 958.0 bits (2475), Expect = 1.5e-275
Identity = 461/469 (98.29%), Postives = 462/469 (98.51%), Query Frame = 0


Query: 1   MKMNQQHPMAI-LFFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQS 60
           MKMN QHPMAI LFFFFSLIIHS CVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQS
Sbjct: 1   MKMN-QHPMAILLFFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQS 60

Query: 61  AINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAV 120
           AINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAV
Sbjct: 61  AINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAV 120

Query: 121 VAENASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKN 180
           VAENASDVEI GGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKN
Sbjct: 121 VAENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKN 180

Query: 181 VRVSNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDT 240
           VRVSNVSLNQPAHWCLHLV CENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDT
Sbjct: 181 VRVSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDT 240

Query: 241 GDDAICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGF 300
           GDDAICPK SNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGF
Sbjct: 241 GDDAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGF 300

Query: 301 QLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITA 360
           QLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN+NFINITA
Sbjct: 301 QLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITA 360

Query: 361 TSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEH 420
           TSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEH
Sbjct: 361 TSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEH 420

Query: 421 IEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGYLRE 469
           IEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISF NFHSGYLRE
Sbjct: 421 IEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGYLRE 468

[Close]

BLAST of Carg01240 vs. ExPASy TrEMBL
Match: A0A5D3DP49 (Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005690 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.3e-252
Identity = 419/453 (92.49%), Postives = 432/453 (95.36%), Query Frame = 0


Query: 13  FFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYV 72
           FFFF LIIHSH  +PSIRL   STSFSVTDFGAIGDG+HYDTAAIQSAINSCP+P RCYV
Sbjct: 12  FFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTAAIQSAINSCPAPSRCYV 71

Query: 73  IFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGG 132
            FPPGTYLTATIWL+SGVVLDIQPGATVLAGT+MEDYP DSSRWYAVVAENASDV I+GG
Sbjct: 72  TFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPGDSSRWYAVVAENASDVGISGG 131

Query: 133 GVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAH 192
           G VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL+GFIGS NVRVSNVS NQPAH
Sbjct: 132 GTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNNVRVSNVSFNQPAH 191

Query: 193 WCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGP 252
           WCLHLVRCENT+IEDVSIYGDFDTPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGP
Sbjct: 192 WCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGP 251

Query: 253 VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF 312
           VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF
Sbjct: 252 VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF 311

Query: 313 SNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKS 372
           SN+NI+TRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNI FINITATSENGVFLSGSKS
Sbjct: 312 SNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKS 371

Query: 373 GVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKW 432
           GVLSNLRF NVKL YKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGL+ ENVDM W
Sbjct: 372 GVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMNW 431

Query: 433 SDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGY 466
           S D DGSLQWNNPLDFRPSTV+NISFFNFHSGY
Sbjct: 432 S-DTDGSLQWNNPLDFRPSTVNNISFFNFHSGY 463

[Close]

BLAST of Carg01240 vs. ExPASy TrEMBL
Match: A0A1S3B7Z6 (exo-poly-alpha-D-galacturonosidase OS=Cucumis melo OX=3656 GN=LOC103486792 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.3e-252
Identity = 419/453 (92.49%), Postives = 432/453 (95.36%), Query Frame = 0


Query: 13  FFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYV 72
           FFFF LIIHSH  +PSIRL   STSFSVTDFGAIGDG+HYDTAAIQSAINSCP+P RCYV
Sbjct: 12  FFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTAAIQSAINSCPAPSRCYV 71

Query: 73  IFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGG 132
            FPPGTYLTATIWL+SGVVLDIQPGATVLAGT+MEDYP DSSRWYAVVAENASDV I+GG
Sbjct: 72  TFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPGDSSRWYAVVAENASDVGISGG 131

Query: 133 GVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAH 192
           G VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL+GFIGS NVRVSNVS NQPAH
Sbjct: 132 GTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNNVRVSNVSFNQPAH 191

Query: 193 WCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGP 252
           WCLHLVRCENT+IEDVSIYGDFDTPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGP
Sbjct: 192 WCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGP 251

Query: 253 VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF 312
           VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF
Sbjct: 252 VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF 311

Query: 313 SNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKS 372
           SN+NI+TRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNI FINITATSENGVFLSGSKS
Sbjct: 312 SNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKS 371

Query: 373 GVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKW 432
           GVLSNLRF NVKL YKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGL+ ENVDM W
Sbjct: 372 GVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMNW 431

Query: 433 SDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGY 466
           S D DGSLQWNNPLDFRPSTV+NISFFNFHSGY
Sbjct: 432 S-DTDGSLQWNNPLDFRPSTVNNISFFNFHSGY 463

[Close]

BLAST of Carg01240 vs. ExPASy TrEMBL
Match: A0A5A7TLI5 (Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00350 PE=3 SV=1)

HSP 1 Score: 872.8 bits (2254), Expect = 6.2e-250
Identity = 418/453 (92.27%), Postives = 431/453 (95.14%), Query Frame = 0


Query: 13  FFFFSLIIHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYV 72
           FFFF LIIHSH  +PSIRL   STSFSVTDFGAIGDG+HYDTAAIQSAINSCP+P RCYV
Sbjct: 12  FFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTAAIQSAINSCPAPSRCYV 71

Query: 73  IFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEITGG 132
            FPPGTYLTATIWL+SGVVLDIQPGATVLAGT+MEDYP DSSRWYAVVAENASDV I+GG
Sbjct: 72  TFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPGDSSRWYAVVAENASDVGISGG 131

Query: 133 GVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAH 192
           G VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL+GFIGS NVRVSNVS NQPAH
Sbjct: 132 GTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNNVRVSNVSFNQPAH 191

Query: 193 WCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGP 252
            CLHLVRCENT+IEDVSIYGDFDTPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGP
Sbjct: 192 -CLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGP 251

Query: 253 VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF 312
           VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF
Sbjct: 252 VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF 311

Query: 313 SNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKS 372
           SN+NI+TRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNI FINITATSENGVFLSGSKS
Sbjct: 312 SNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKS 371

Query: 373 GVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKW 432
           GVLSNLRF NVKL YKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGL+ ENVDM W
Sbjct: 372 GVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMNW 431

Query: 433 SDDDDGSLQWNNPLDFRPSTVSNISFFNFHSGY 466
           S D DGSLQWNNPLDFRPSTV+NISFFNFHSGY
Sbjct: 432 S-DTDGSLQWNNPLDFRPSTVNNISFFNFHSGY 462

[Close]

BLAST of Carg01240 vs. TAIR 10
Match: AT3G57790.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 644.8 bits (1662), Expect = 5.3e-185
Identity = 302/463 (65.23%), Postives = 369/463 (79.70%), Query Frame = 0


Query: 11  ILFFFFSLI-IHSHCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVR 70
           +L  FFSL+   S      I+LPG S + SVTDFGA GDG++YDT+AIQS I++C     
Sbjct: 7   LLLLFFSLVQSRSDTSYSKIQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYT 66

Query: 71  -----CYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMED-YPMD-SSRWYAVVAE 130
                C V+FP G YLTA + L+SGV+LD+   A +L G R+ED YP + SS WY VVA 
Sbjct: 67  SFSSICRVVFPSGNYLTAKLHLRSGVILDVTENAVLLGGPRIEDYYPAETSSDWYVVVAN 126

Query: 131 NASDVEITGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRV 190
           NA+DV ITGGG +DGQG KFV +FD++KNVMVSWN+TGAC GDECRP L+GF+ S NV +
Sbjct: 127 NATDVGITGGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEI 186

Query: 191 SNVSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDD 250
            N++L +PA+WCLH+VRCENT + DVSI GDF+TPNNDGIDIEDSNNT ITRC IDTGDD
Sbjct: 187 WNITLREPAYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDD 246

Query: 251 AICPKTSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLR 310
           AICPKT  GP++NLTAT+CWIRTKSSAIKLGSASWF+F  ++FDNITI +SHRGLG Q+R
Sbjct: 247 AICPKTYTGPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIR 306

Query: 311 DGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSE 370
           DGG+ +D+TFSN+NISTRYYDPSWWGRAEPIY+TTCPRD  +KEGSISN+ F+NIT  SE
Sbjct: 307 DGGNVSDVTFSNINISTRYYDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITIDSE 366

Query: 371 NGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKH-GMAGMIMEHIE 430
           NGVFLSGS +G+LS+++F N+ LT++RW+ Y  G+ DYRPGCQG V H   +G+IMEH+ 
Sbjct: 367 NGVFLSGSPNGLLSDIKFKNMNLTFRRWSNYSAGLVDYRPGCQGLVNHRATSGIIMEHVN 426

Query: 431 GLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFFNFHSG 465
           G   ENVD+KWSDDDD +  WN PL+FRPSTV+N+SF  F SG
Sbjct: 427 GFRVENVDLKWSDDDDVNAAWNVPLEFRPSTVNNVSFVGFTSG 469

[Close]

BLAST of Carg01240 vs. TAIR 10
Match: AT3G48950.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 9.1e-28
Identity = 103/365 (28.22%), Postives = 169/365 (46.30%), Query Frame = 0


Query: 40  VTDFGAIGDGVHYDTAAIQSAINSCPSPVR---CYVIFPPGTYLTATIWLQSGVVLDIQP 99
           +TDFGA+GDG   +T A ++AI+            ++ PPG +LT +  L S   L IQ 
Sbjct: 47  LTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQR 106

Query: 100 GATVLAGTRMEDYPM--------------DSSRWYAVVA-ENASDVEITG-GGVVDGQGL 159
           GAT+LA     ++P+               + R+ ++++  N +DV ITG  G ++GQG 
Sbjct: 107 GATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQ 166

Query: 160 KFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRC 219
            + +KF K+K   ++            RP LI  + SKN+++SN++L     W +H V C
Sbjct: 167 YWWDKF-KKKQFKIT------------RPYLIEILFSKNIQISNITLIDSPSWNIHPVYC 226

Query: 220 ENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKT---SNGPVFNLT 279
            + I++ V++      PN DGI+ +   NT I  C I +GDD I  K+     G  F + 
Sbjct: 227 NSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMP 286

Query: 280 ATNCWIR------TKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSA--ND 339
                IR       KS+ + LGS        +  +++T+ ++   +  +   G  A   D
Sbjct: 287 TQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKD 346

Query: 340 ITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSG 375
           I    + + T  Y   +W             DP +    I+NIN+ ++TA     V +S 
Sbjct: 347 IYARRITMKTMKY--VFWMSGNYGSHPDEGFDPKALP-EITNINYRDMTA---ENVTMSA 392

[Close]

BLAST of Carg01240 vs. TAIR 10
Match: AT3G62110.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-26
Identity = 104/405 (25.68%), Postives = 172/405 (42.47%), Query Frame = 0


Query: 23  HCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSA---INSCPSPVRCYVIFPPGTY 82
           HC   ++       S S+T+FGA+GDGV  +T A Q+A   +NS        +  P G +
Sbjct: 28  HCEYSNLASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQW 87

Query: 83  LTATIWLQSGVVLDIQPGATVLAGTRMEDYP-MDSSRWYA-------------VVAENAS 142
           LT +  L S + L +  GAT+L  T  E++P +D    Y              +  +N +
Sbjct: 88  LTGSFDLISHLTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLT 147

Query: 143 DVEITG-GGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSN 202
           DV ITG  G +DGQG            V   W + G    +  RP L+  + S  + +SN
Sbjct: 148 DVVITGENGTIDGQG-----------TVWWDWFRNGEL--NYTRPHLVELMNSTGLIISN 207

Query: 203 VSLNQPAHWCLHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAI 262
           ++      W +H V C + ++++++I    ++PN DG+D + S N  I  C I TGDD +
Sbjct: 208 LTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLV 267

Query: 263 CPK-------------TSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIV 322
             K             +S   +  LT       T SS I +GS      + +   ++ + 
Sbjct: 268 SIKSGWDEYGISYARPSSKIKINRLTGQT----TSSSGIAIGSEMSGGVSEIYIKDLHLF 327

Query: 323 DSHRGLGFQLR--DGGSANDITFSNMNISTRYYDPSWWGR--AEPIYVTTCPRDPGSKEG 382
           +S+ G+  +     GG   ++   N+ +        + G+    P         P  ++ 
Sbjct: 328 NSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKI 387

Query: 383 SISNINFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTK 393
           +  N+N   I         L G +  V  N+ F NV L  K+ +K
Sbjct: 388 TFENVNGDGIGVAG----LLEGIEGDVFKNICFLNVTLRVKKNSK 411

[Close]

BLAST of Carg01240 vs. TAIR 10
Match: AT4G23820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 4.2e-25
Identity = 95/314 (30.25%), Postives = 142/314 (45.22%), Query Frame = 0


Query: 39  SVTDFGAIGDGVHYDTAAIQSAINSCPSPVR---CYVIFPPGTYLTATIWLQSGVVLDIQ 98
           S+TDFG +GDG   +T A ++AI       R     +  PPG YLT +  L S + L + 
Sbjct: 42  SITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLA 101

Query: 99  PGATVLAGTRMEDYP-------------MDSSRWYAVV-AENASDVEITG-GGVVDGQGL 158
            GA + A     ++P             +   R+ + +  +   DV ITG  G +DGQG 
Sbjct: 102 KGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQG- 161

Query: 159 KFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRC 218
                        V WN   +      RP+LI F  SK + +SNV       W +H V C
Sbjct: 162 ------------EVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYC 221

Query: 219 ENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKT---SNGPVFNLT 278
            N +I  V+I    D+PN DGID + S N  I    I TGDD +  K+     G  +   
Sbjct: 222 SNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRP 281

Query: 279 ATNCWIR--TKSS---AIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRD----GGSAN 323
           ++N  IR  T SS    I +GS +      ++ ++IT+  S+ G+G  ++     GG   
Sbjct: 282 SSNITIRRITGSSPFAGIAIGSETSGGIKNIIAEHITL--SNMGVGVNIKTNIGRGGYIK 340

[Close]

BLAST of Carg01240 vs. TAIR 10
Match: AT4G33440.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-25
Identity = 87/306 (28.43%), Postives = 143/306 (46.73%), Query Frame = 0


Query: 39  SVTDFGAIGDGVHYDTAAIQSAI---NSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQ 98
           S+TDFG +GDG   +TAA + A+       +     +  P GT+L+ +  L S   L ++
Sbjct: 73  SITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLE 132

Query: 99  PGATVLAGTRMEDYPM-------------DSSRWYAVV-AENASDVEITG-GGVVDGQGL 158
            GA +L    ++++P+                R  +++  +N ++V ITG  G +DGQG 
Sbjct: 133 RGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGK 192

Query: 159 KFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVRC 218
            + E +         WN+T        R  LI    S N+ +SN++L     W +H V C
Sbjct: 193 MWWELW---------WNRTLV----HTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYC 252

Query: 219 ENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKT---SNGPVFNLT 278
            N +I +++I    + PN DGID + S N  I  C I++GDD +  K+     G      
Sbjct: 253 SNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARP 312

Query: 279 ATNCWIRTKS------SAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRD--GGSAND 316
           ++N  IR  S      S + +GS        +  ++I + DS  GL  +     GG  ++
Sbjct: 313 SSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISN 365

The following BLAST results are available for this feature:

BLAST of Carg01240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027765.1	2.6e-282	100.00	Exo-poly-alpha-D-galacturonosidase, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_023538800.1	4.5e-279	99.15	uncharacterized protein LOC111799618 [Cucurbita pepo subsp. pepo]	[more]
XP_022931747.1	6.5e-278	99.15	uncharacterized protein LOC111437911 [Cucurbita moschata]	[more]
XP_022971216.1	3.0e-275	98.29	uncharacterized protein LOC111470006 [Cucurbita maxima]	[more]
KAG6596223.1	4.5e-263	99.55	Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma ...	[more]

BLAST of Carg01240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P15922	7.8e-24	27.05	Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 S...	[more]
Q8RY29	1.3e-18	26.29	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
P26216	6.4e-18	26.51	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]
P35338	1.4e-17	26.22	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
P35336	1.1e-14	25.00	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]

BLAST of Carg01240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUK0	3.2e-278	99.15	uncharacterized protein LOC111437911 OS=Cucurbita moschata OX=3662 GN=LOC1114379...	[more]
A0A6J1I2Q7	1.5e-275	98.29	uncharacterized protein LOC111470006 OS=Cucurbita maxima OX=3661 GN=LOC111470006...	[more]
A0A5D3DP49	1.3e-252	92.49	Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B7Z6	1.3e-252	92.49	exo-poly-alpha-D-galacturonosidase OS=Cucumis melo OX=3656 GN=LOC103486792 PE=3 ...	[more]
A0A5A7TLI5	6.2e-250	92.27	Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Carg01240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57790.1	5.3e-185	65.23	Pectin lyase-like superfamily protein	[more]
AT3G48950.1	9.1e-28	28.22	Pectin lyase-like superfamily protein	[more]
AT3G62110.1	2.9e-26	25.68	Pectin lyase-like superfamily protein	[more]
AT4G23820.1	4.2e-25	30.25	Pectin lyase-like superfamily protein	[more]
AT4G33440.1	5.5e-25	28.43	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 28..394 e-value: 1.4E-94 score: 319.4
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 116..387 e-value: 1.9E-21 score: 76.5
None	No IPR available	PANTHER	PTHR31339:SF0	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 33..465
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 33..465
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 30..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01240-RA	Carg01240-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity