Carg01238 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01238
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	OTU domain-containing protein
Location	Carg_Chr06: 457270 .. 459892 (-)
RNA-Seq Expression	Carg01238
Synteny	Carg01238

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATTCCGAAGCAATGCGTCTCAAAAAAGGGGCCGTGTGTTCGTGGCTCAAAATTAATCGCAAAGTTACCGTTGCAGGTATTCTTTCCTTTAATCCCATTTCTTGAATCTTATGCCATTTTTGGGGTTTGCTTTTGTTGTTTCTTTCTTCCACGTGCTCGGGTTTTTCTTCGAATTTTAAATCTCCTCCCCTCTTCGATTTGATCCTCTGCTGCTTGCCTTCTGTTGATCTTTCGCTGTTTGATTTTGTTCTTTCTCGAGCTTTGTTCAGGGTTTTCAGATTCTTGACCTTCGTGTTTTTCCTTGCTCAATGGTAATGGGGACTCTTATTATCTTCGTTCTAGTTCTTTTTCTTTTTCCCCTTTCCTTGTTCGTTGTTAATCTTCTTTTGGGTGTGTGCATTTATAGCCGTCTGCTTGAACTTTGGTTTATATTTCAGTAACATAATGTGAATTCATATTGGCAGAGCATGAGCTATTGCAGATGAAATGTAATTCTTAGTCATGGATATTTGTGATTTTAAGGCTGTTTATTGTACTGCATCATATTCTATATTACAAAAAAGAAACATGTTCATTTTGTAGTATTCCTGAACAAAGGTTTTGTAGCTCGACTGTATGTTAAGACGTTTTCGTTCTTGGTTTGGTTTGATCGTAGTTAGGAAGGTGGAAGGAGTCTAAATCAATGGACATTAATGAACCATCATCGATGGACGTTGCACATGACACACAATCAATTTGACTCAAGGTCCAGCACTAGTAGAAGTAGCGTATGTTAATGCTTTTGTAAACATCGATTTTTCGTTGACTCAGAGTAAGTATACATCCTTGTATTTATAGGAGGGCTTTCCTGTGACTAAGATCAAAACTGTTCAAGGAAATTAAAAAGGGGATATCATCAACAATTCCAACTTTGAAATTATTTGCTGAAGAAGTGTAATTAAATATACGAAAGGCATCCCTATCATATGACTAGGGGCTCCAACTCCATGATATATCGACACGTATACTTCATTGTTACTTTACGCGAATTTAGATAGCTACTTCTTTGGCCATTGTAGCTATAGATGATATACCAGCATTGGTTTGTTCATGTTAAGCATCAGAGATAAAAGAAGGGCGTTCAAATTTTTTGGTCCAAACTATGGAATTCTTTCAATTTCTGACTTGTTTCCTCTTTCTTTGTTCTGTTAATTTCTCAGGCTACACCAGCATGCCTATTGGCTCAATAAGCATTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGGCCAAAGTGTTCGGGTCGAACCATCTCCACAATGTCATCTTGTTCACCAAATACTAGCCAAAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCACTATCATGCAAAGGTATGAATATGAAACTCTCAATCCCCAATGATGATCAAATATAACATACGATGGCCAGAAAGATGTGCATCTGATGGCTTGTTATTCAACTTCTGAACCAGTCCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCAAGTATTCTGTTATAGGTGAGCTTTGAAGCCTTCTACGTCTTCTTTTACATTAAACGGTCAAATCGACAATTGATTGTAGCAAATTGTTTGTTCTGGGCAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAATCTACAGAGAGATTTGGCAGATGAGTTGCGGACTAAAGTAAGTTCTATTAGTTTGTTTTTGAGAGAATACCATGGTGACAAGAATCCATATTTCAGACCAATTTCTTTTCAGGTTGCAGATGAGTTTATCAAAAGACGAGAGGAAACAGAATGGTGACTCTCTCTCTGTCTCTGTCTCTCTTAAAAAGAATGTTAAGTTTGTGAGGAACGTTCAGGAACTTATTAGATATTTTAAAGTTTAAAGATCTATCAAAACACATTTTAAAATCCAAGAACATTTTAGACACAAATTTGAAAGTTCAATGACTAAACTATCTCTACCGTATGGAACAAGATGAGGTTCTCCCATATCCATCCATCCTGGGCTCACAAAAACATCATGGCTGTGTTGACAATAGGTTCATTGAAGGCGATTTCGATACGTACGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCTGAGCTATTCATGGCTTCTCATATTCTTCAGTAAGCGCTTCCTCTCAATACTTGTTTCTCTACTGTGGTATATGAATGAATTGCTTGTTAAGATTGGAGGCTGTGGTTGCTGCTGCAGTGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCCGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGTTTTGGCC

mRNA sequence

CTAATTCCGAAGCAATGCGTCTCAAGGTTTGCTTTTGTTGTTTCTTTCTTCCACGTGCTCGGGTTTTTCTTCGAATTTTAAATCTCCTCCCCTCTTCGATTTGATCCTCTGCTGCTTGCCTTCTGTTGATCTTTCGCTGTTTGATTTTGTTCTTTCTCGAGCTTTGTTCAGGGTTTTCAGATTCTTGACCTTCGTGTTTTTCCTTGCTCAATGGCTACACCAGCATGCCTATTGGCTCAATAAGCATTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGGCCAAAGTGTTCGGGTCGAACCATCTCCACAATGTCATCTTGTTCACCAAATACTAGCCAAAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCACTATCATGCAAAGTCCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCAAGTATTCTGTTATAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAATCTACAGAGAGATTTGGCAGATGAGTTGCGGACTAAAGTTGCAGATGAGTTTATCAAAAGACGAGAGGAAACAGAATGGTTCATTGAAGGCGATTTCGATACGTACGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCTGAGCTATTCATGGCTTCTCATATTCTTCAGTAAGCGCTTCCTCTCAATACTTGTTTCTCTACTGTGGTATATGAATGAATTGCTTGTTAAGATTGGAGGCTGTGGTTGCTGCTGCAGTGCACCTATCATAGTGTACATGTACGATAAAGCTTCTGGTGGGTTGATATCCATTGCCGAATATGGCGATGAATATGGCAAACAAAATCCCATCACAGTTCTGTACCATGGTTTTGGCC

Coding sequence (CDS)

ATGCCTATTGGCTCAATAAGCATTTGCACGAGGAATGTTGTCCCTCTGAACTTCCGTGTTCGATCACAGATGGGCAGCAACATTTGTACCGTGCTGTCTCGAAGGACATCGAACTCTTGCTGTTCCTATGGCATTTCAAGGCCAAAGTGTTCGGGTCGAACCATCTCCACAATGTCATCTTGTTCACCAAATACTAGCCAAAGATTTCAGGGAGGCTGTCTCAGTTATTGCTTCTCCAGACAGCCAATTGAGTTGAAGTCTTTTAAAGATTTGATTACAGATGAAGGGTTGTGTGGAAGAGGACTTGAAATTTCACTATCATGCAAAGTCCATGCTGAAGCAGCTTGTGAGAAAGAGGATAATGAAGAAAATTCTGATTCTTCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCAAGTATTCTGTTATAGGAATTCCCGGAGATGGACGATGTTTGTTCCGCTCGGTCGCTCATGGTGCTTGTTTACGATCTGGGAAACCAGCTCCAAGCCAGAATCTACAGAGAGATTTGGCAGATGAGTTGCGGACTAAAGTTGCAGATGAGTTTATCAAAAGACGAGAGGAAACAGAATGGTTCATTGAAGGCGATTTCGATACGTACGTGTCTAATATGCGAAAACCACGCGTATGGGGAGGCGAGCCTGAGCTATTCATGGCTTCTCATATTCTTCAGTAA

Protein sequence

MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSSCSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ

Homology

[Close]

BLAST of Carg01238 vs. NCBI nr
Match: KAG7027767.1 (OTU domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479.2 bits (1232), Expect = 2.1e-131
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS
Sbjct: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED 120
           CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED
Sbjct: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED 120

Query: 121 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 180
           NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA
Sbjct: 121 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 180

Query: 181 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ 234
           DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ
Sbjct: 181 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ 233

[Close]

BLAST of Carg01238 vs. NCBI nr
Match: XP_023538804.1 (OTU domain-containing protein At3g57810-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 2.5e-129
Identity = 228/232 (98.28%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           MPIGSIS+CTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYG+SRPKCS +TISTMSS
Sbjct: 26  MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGVSRPKCSDQTISTMSS 85

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED 120
           CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED
Sbjct: 86  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED 145

Query: 121 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 180
           NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA
Sbjct: 146 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 205

Query: 181 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL 233
           DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL
Sbjct: 206 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL 257

[Close]

BLAST of Carg01238 vs. NCBI nr
Match: XP_023538808.1 (uncharacterized protein LOC111799621 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470.7 bits (1210), Expect = 7.3e-129
Identity = 229/233 (98.28%), Postives = 231/233 (99.14%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           MPIGSIS+CTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCS +TISTMSS
Sbjct: 26  MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSS 85

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED 120
           CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLS KVHAEAACEKED
Sbjct: 86  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSSKVHAEAACEKED 145

Query: 121 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 180
           NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA
Sbjct: 146 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 205

Query: 181 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ 234
           DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ
Sbjct: 206 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ 258

[Close]

BLAST of Carg01238 vs. NCBI nr
Match: XP_023538803.1 (OTU domain-containing protein At3g57810-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468.8 bits (1205), Expect = 2.8e-128
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           MPIGSIS+CTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCS +TISTMSS
Sbjct: 26  MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSS 85

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED 120
           CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLS KVHAEAACEKED
Sbjct: 86  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSSKVHAEAACEKED 145

Query: 121 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 180
           NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA
Sbjct: 146 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 205

Query: 181 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL 233
           DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL
Sbjct: 206 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL 257

[Close]

BLAST of Carg01238 vs. NCBI nr
Match: XP_023538805.1 (OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023538806.1 OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023538807.1 OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468.8 bits (1205), Expect = 2.8e-128
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           MPIGSIS+CTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCS +TISTMSS
Sbjct: 1   MPIGSISVCTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSDQTISTMSS 60

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKED 120
           CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLS KVHAEAACEKED
Sbjct: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSSKVHAEAACEKED 120

Query: 121 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 180
           NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA
Sbjct: 121 NEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLA 180

Query: 181 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL 233
           DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL
Sbjct: 181 DELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL 232

[Close]

BLAST of Carg01238 vs. ExPASy Swiss-Prot
Match: Q8LBZ4 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thaliana OX=3702 GN=OTU4 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 105 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 164
           S S   +A+++ +K+ N  +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CL
Sbjct: 131 STSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCL 190

Query: 165 RSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPE 224
           RSGK AP + +QR+LADELRT+VADEFI+RR+ETEWF+EGDFDTYV  +R P VWGGEPE
Sbjct: 191 RSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPE 250

Query: 225 LFMASHILQ 234
           LFMASH+LQ
Sbjct: 251 LFMASHVLQ 259

[Close]

BLAST of Carg01238 vs. ExPASy Swiss-Prot
Match: Q8GYW0 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thaliana OX=3702 GN=OTU3 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 34/113 (30.09%), Postives = 51/113 (45.13%), Query Frame = 0


Query: 127 SSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLADELRTK 186
           +S +  S   K   KY+V  + GDGRCLFR++  G     G     Q  +RD ADELR  
Sbjct: 61  NSSMNRSPAAKKVEKYAVDRVKGDGRCLFRALVKGMAFNKGITLNPQR-ERDDADELRMA 120

Query: 187 VADEFIKRREETEWF--------IEGDFDTYVSNMRKPRVWGGEPELFMASHI 232
           V +      +E E +        ++     +   + +   WGGE EL + S +
Sbjct: 121 VKEVICNDPKEREKYKEALVAITVDESLKRFCQRIGRHDFWGGESELLVLSKL 172

[Close]

BLAST of Carg01238 vs. ExPASy Swiss-Prot
Match: Q6GM06 (Deubiquitinase OTUD6B OS=Xenopus laevis OX=8355 GN=otud6b PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.0e-05
Identity = 32/133 (24.06%), Postives = 61/133 (45.86%), Query Frame = 0


Query: 113 EAACEKEDNEENSDSSHVKLSHGKKVYT----------KYSVIGIPGDGRCLFRSVAHGA 172
           +AA EKE ++  +++    LS  + + +          +  +  IP DG C++R++ H  
Sbjct: 111 KAAQEKERDDRIAEAEIANLSGARHLESQKLAQILAERELQIRQIPSDGHCMYRAIEH-Q 170

Query: 173 CLRSGKPAPSQNLQRDLADELRTKVAD--EFIKRREETEWFIEGDFDTYVSNMRKPRVWG 232
               G      NL+   AD ++ +  D   F+      + + + +F  Y +++     WG
Sbjct: 171 LNEQGNSLTVANLRSQTADYMQKRAEDFLPFLTNSSTGDMYTQEEFQKYCTDIVNTPAWG 230

Query: 233 GEPELFMASHILQ 234
           G+ EL   SHIL+
Sbjct: 231 GQLELRALSHILK 242

[Close]

BLAST of Carg01238 vs. ExPASy TrEMBL
Match: A0A1S3B7A9 (OTU domain-containing protein At3g57810 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.0e-103
Identity = 190/235 (80.85%), Postives = 210/235 (89.36%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           M IGSISICTRN VPLN R+ +QMGSNICTVLSRRTS SCCSYGISRPK + ++++T+SS
Sbjct: 1   MSIGSISICTRNAVPLNLRIYTQMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISS 60

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCKVHAEAACEK 120
           CSPNTSQRFQGGCLS CFSR+ I+ ++F  KDLITD G  GR +EISL+CK     A EK
Sbjct: 61  CSPNTSQRFQGGCLSTCFSRRSIDFQAFTVKDLITDGGSPGREVEISLACK-----AYEK 120

Query: 121 EDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRD 180
           +DNEENSDSSHVKLSHGKKVYT YSVIGIPGDGRCLFRSVAHGACLRSGKPAPS++LQRD
Sbjct: 121 DDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRD 180

Query: 181 LADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ 234
           LADELR+ VADEFIKRREETEWF+EGDFDTYVSNMRKP VWGGEPELFMASH+LQ
Sbjct: 181 LADELRSNVADEFIKRREETEWFVEGDFDTYVSNMRKPHVWGGEPELFMASHVLQ 230

[Close]

BLAST of Carg01238 vs. ExPASy TrEMBL
Match: A0A1S3B6T1 (OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 195/280 (69.64%), Postives = 215/280 (76.79%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           M IGSISICTRN VPLN R+ +QMGSNICTVLSRRTS SCCSYGISRPK + ++++T+SS
Sbjct: 1   MSIGSISICTRNAVPLNLRIYTQMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISS 60

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCK--------- 120
           CSPNTSQRFQGGCLS CFSR+ I+ ++F  KDLITD G  GR +EISL+CK         
Sbjct: 61  CSPNTSQRFQGGCLSTCFSRRSIDFQAFTVKDLITDGGSPGREVEISLACKGMNVKLSIP 120

Query: 121 ------------------------------------VHAEAACEKEDNEENSDSSHVKLS 180
                                               VHAEAA EK+DNEENSDSSHVKLS
Sbjct: 121 NDGTFSKIKYNMRWPERWASAGLVFGWVVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLS 180

Query: 181 HGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLADELRTKVADEFIK 234
           HGKKVYT YSVIGIPGDGRCLFRSVAHGACLRSGKPAPS++LQRDLADELR+ VADEFIK
Sbjct: 181 HGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRDLADELRSNVADEFIK 240

[Close]

BLAST of Carg01238 vs. ExPASy TrEMBL
Match: A0A5D3DP86 (OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005670 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 195/280 (69.64%), Postives = 215/280 (76.79%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           M IGSISICTRN VPLN R+ +QMGSNICTVLSRRTS SCCSYGISRPK + ++++T+SS
Sbjct: 1   MSIGSISICTRNAVPLNLRIYTQMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISS 60

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCK--------- 120
           CSPNTSQRFQGGCLS CFSR+ I+ ++F  KDLITD G  GR +EISL+CK         
Sbjct: 61  CSPNTSQRFQGGCLSTCFSRRSIDFQAFTVKDLITDGGSPGREVEISLACKGMNVKLSIP 120

Query: 121 ------------------------------------VHAEAACEKEDNEENSDSSHVKLS 180
                                               VHAEAA EK+DNEENSDSSHVKLS
Sbjct: 121 NDGTFSKIKYNMRWPERWASAGLVFGWVVCYSTSEPVHAEAAYEKDDNEENSDSSHVKLS 180

Query: 181 HGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLADELRTKVADEFIK 234
           HGKKVYT YSVIGIPGDGRCLFRSVAHGACLRSGKPAPS++LQRDLADELR+ VADEFIK
Sbjct: 181 HGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRDLADELRSNVADEFIK 240

[Close]

BLAST of Carg01238 vs. ExPASy TrEMBL
Match: A0A6J1DJ08 (OTU domain-containing protein At3g57810 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021529 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.9e-100
Identity = 186/234 (79.49%), Postives = 203/234 (86.75%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           M IGSIS CTRNVV LN RV  QMGSNIC+VLS R SNSCCSYGISRPK + ++++T+SS
Sbjct: 1   MNIGSISACTRNVVHLNSRVPMQMGSNICSVLSPRISNSCCSYGISRPKYADQSVTTISS 60

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCKVHAEAACEK 120
           C+PNTSQRF GGCLSYCFSRQPI+ K+   KDLITD G  GRGLEISL+CK     ACEK
Sbjct: 61  CTPNTSQRFPGGCLSYCFSRQPIDFKNLTVKDLITDGGSHGRGLEISLACK-----ACEK 120

Query: 121 EDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRD 180
           EDNEENSDSS VK SHGK VYT YSVIGIPGDGRCLFRSVAHGACLRSGK APS++LQRD
Sbjct: 121 EDNEENSDSSPVKFSHGKTVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKAAPSESLQRD 180

Query: 181 LADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHIL 233
           LADELR KVADEFIKRR+ETEWF+EGDFD YVSNMRKP +WGGEPELFMASH+L
Sbjct: 181 LADELRNKVADEFIKRRKETEWFVEGDFDRYVSNMRKPHIWGGEPELFMASHVL 229

[Close]

BLAST of Carg01238 vs. ExPASy TrEMBL
Match: A0A6J1DJP8 (OTU domain-containing protein At3g57810 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021529 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.5e-98
Identity = 191/278 (68.71%), Postives = 208/278 (74.82%), Query Frame = 0


Query: 1   MPIGSISICTRNVVPLNFRVRSQMGSNICTVLSRRTSNSCCSYGISRPKCSGRTISTMSS 60
           M IGSIS CTRNVV LN RV  QMGSNIC+VLS R SNSCCSYGISRPK + ++++T+SS
Sbjct: 1   MNIGSISACTRNVVHLNSRVPMQMGSNICSVLSPRISNSCCSYGISRPKYADQSVTTISS 60

Query: 61  CSPNTSQRFQGGCLSYCFSRQPIELKSF--KDLITDEGLCGRGLEISLSCK--------- 120
           C+PNTSQRF GGCLSYCFSRQPI+ K+   KDLITD G  GRGLEISL+CK         
Sbjct: 61  CTPNTSQRFPGGCLSYCFSRQPIDFKNLTVKDLITDGGSHGRGLEISLACKGMNVKLSIT 120

Query: 121 -----------------------------------VHAEAACEKEDNEENSDSSHVKLSH 180
                                              VHAEAACEKEDNEENSDSS VK SH
Sbjct: 121 NDGFSKIKHNMRWPERCASAGLVFGWVVCYSSSEPVHAEAACEKEDNEENSDSSPVKFSH 180

Query: 181 GKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLADELRTKVADEFIKR 233
           GK VYT YSVIGIPGDGRCLFRSVAHGACLRSGK APS++LQRDLADELR KVADEFIKR
Sbjct: 181 GKTVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKAAPSESLQRDLADELRNKVADEFIKR 240

[Close]

BLAST of Carg01238 vs. TAIR 10
Match: AT3G57810.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 6.8e-48
Identity = 108/231 (46.75%), Postives = 145/231 (62.77%), Query Frame = 0


Query: 6   ISICTRNVVPLNFRVRSQMGSNICTVLSRRTSN-SCCSY--GISRPKCSGRTISTMSSCS 65
           I+ C+RN +     ++  +GS +  V++  +S  SC S   G+SR   +G  +S     S
Sbjct: 8   ITTCSRNAI----SIKRHLGSRLYGVVAHGSSKFSCYSLLSGLSRRHYTGFRVSV----S 67

Query: 66  PNTSQRFQGGCLSYCFSRQPIELKSFKDLITDEGLCGRGLEISLSCKVHAEAACEKEDNE 125
              S     G   + ++   + L           +C      S S   +A+++ +K+ N 
Sbjct: 68  NRPSSWHDKGLFGFAYTGVIVSLL----------VC----YSSTSQSAYADSSRDKDANN 127

Query: 126 ENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLADE 185
            +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CLRSGK AP + +QR+LADE
Sbjct: 128 VHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCLRSGKLAPGEKMQRELADE 187

Query: 186 LRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPELFMASHILQ 234
           LRT+VADEFI+RR+ETEWF+EGDFDTYV  +R P VWGGEPELFMASH+LQ
Sbjct: 188 LRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPELFMASHVLQ 216

[Close]

BLAST of Carg01238 vs. TAIR 10
Match: AT3G57810.2 (Cysteine proteinases superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 8.8e-48
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 105 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 164
           S S   +A+++ +K+ N  +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CL
Sbjct: 131 STSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCL 190

Query: 165 RSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPE 224
           RSGK AP + +QR+LADELRT+VADEFI+RR+ETEWF+EGDFDTYV  +R P VWGGEPE
Sbjct: 191 RSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPE 250

Query: 225 LFMASHILQ 234
           LFMASH+LQ
Sbjct: 251 LFMASHVLQ 259

[Close]

BLAST of Carg01238 vs. TAIR 10
Match: AT3G57810.3 (Cysteine proteinases superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 8.8e-48
Identity = 87/129 (67.44%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 105 SLSCKVHAEAACEKEDNEENSDSSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACL 164
           S S   +A+++ +K+ N  +  SS  K  +GK+VYT YS+IGIPGDGRCLFRSVAHG CL
Sbjct: 131 STSQSAYADSSRDKDANNVHHHSSDGKFHNGKRVYTDYSIIGIPGDGRCLFRSVAHGFCL 190

Query: 165 RSGKPAPSQNLQRDLADELRTKVADEFIKRREETEWFIEGDFDTYVSNMRKPRVWGGEPE 224
           RSGK AP + +QR+LADELRT+VADEFI+RR+ETEWF+EGDFDTYV  +R P VWGGEPE
Sbjct: 191 RSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPE 250

Query: 225 LFMASHILQ 234
           LFMASH+LQ
Sbjct: 251 LFMASHVLQ 259

[Close]

BLAST of Carg01238 vs. TAIR 10
Match: AT2G38025.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-07
Identity = 34/113 (30.09%), Postives = 51/113 (45.13%), Query Frame = 0


Query: 127 SSHVKLSHGKKVYTKYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSQNLQRDLADELRTK 186
           +S +  S   K   KY+V  + GDGRCLFR++  G     G     Q  +RD ADELR  
Sbjct: 61  NSSMNRSPAAKKVEKYAVDRVKGDGRCLFRALVKGMAFNKGITLNPQR-ERDDADELRMA 120

Query: 187 VADEFIKRREETEWF--------IEGDFDTYVSNMRKPRVWGGEPELFMASHI 232
           V +      +E E +        ++     +   + +   WGGE EL + S +
Sbjct: 121 VKEVICNDPKEREKYKEALVAITVDESLKRFCQRIGRHDFWGGESELLVLSKL 172

The following BLAST results are available for this feature:

BLAST of Carg01238 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027767.1	2.1e-131	100.00	OTU domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023538804.1	2.5e-129	98.28	OTU domain-containing protein At3g57810-like isoform X2 [Cucurbita pepo subsp. p...	[more]
XP_023538808.1	7.3e-129	98.28	uncharacterized protein LOC111799621 isoform X4 [Cucurbita pepo subsp. pepo]	[more]
XP_023538803.1	2.8e-128	98.28	OTU domain-containing protein At3g57810-like isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_023538805.1	2.8e-128	98.28	OTU domain-containing protein At3g57810-like isoform X3 [Cucurbita pepo subsp. p...	[more]

BLAST of Carg01238 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBZ4	1.2e-46	67.44	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thalian...	[more]
Q8GYW0	2.8e-06	30.09	OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thalian...	[more]
Q6GM06	9.0e-05	24.06	Deubiquitinase OTUD6B OS=Xenopus laevis OX=8355 GN=otud6b PE=2 SV=1	[more]

BLAST of Carg01238 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7A9	2.0e-103	80.85	OTU domain-containing protein At3g57810 isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3B6T1	1.1e-101	69.64	OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3DP86	1.1e-101	69.64	OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1DJ08	5.9e-100	79.49	OTU domain-containing protein At3g57810 isoform X2 OS=Momordica charantia OX=367...	[more]
A0A6J1DJP8	2.5e-98	68.71	OTU domain-containing protein At3g57810 isoform X1 OS=Momordica charantia OX=367...	[more]

BLAST of Carg01238 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57810.1	6.8e-48	46.75	Cysteine proteinases superfamily protein	[more]
AT3G57810.2	8.8e-48	67.44	Cysteine proteinases superfamily protein	[more]
AT3G57810.3	8.8e-48	67.44	Cysteine proteinases superfamily protein	[more]
AT2G38025.1	2.0e-07	30.09	Cysteine proteinases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.70.80		coord: 117..233 e-value: 1.5E-22 score: 82.0
None	No IPR available	PANTHER	PTHR12419	OTU DOMAIN CONTAINING PROTEIN	coord: 108..233
None	No IPR available	PANTHER	PTHR12419:SF8	OS09G0487700 PROTEIN	coord: 108..233
IPR003323	OTU domain	PFAM	PF02338	OTU	coord: 148..233 e-value: 1.9E-19 score: 70.4
IPR003323	OTU domain	PROSITE	PS50802	OTU	coord: 142..233 score: 14.340099
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 141..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01238-RA	Carg01238-RA	mRNA