Carg01195 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01195
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr06: 740238 .. 741812 (-)
RNA-Seq Expression	Carg01195
Synteny	Carg01195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGGCTCTACCGGCGATCTTCGCGAGCTCTGGTGTCGAGAAATCGACCATTCTTCAGATTTCTAAGATCCATCTTCAACGATTGGAGTCGTAGGGAGTATCATCGCGATTCATACGATTACACGAAGTTATTACAACATTGCAGATCTATCAGAAGCGTTGAAGAACTTCATGCTCAGATCGTTGTTGAAGGTCACGACCAAAATGGATTCTTAGCCACGAAGCTAATTGGTAAATATGCCGAGTATGGCGAGGAAAAAATGGAAATTGCACGGAAGGTGTTCGATAGATTGCTTGAAAAAGATGTGTTCGTATGGAACGTGGTTATTCAAGGGTATGCGAATTGGGGTCCGTTTGCTGAAGCTCTAAACCTGTATGATGAAATGCGGGTCGGTGGCGAACCCACCAATCGCTACACATTTCCTTTTGTGTTGAAGGCATGTGGCGCCATGAAGAACGGTGACAAGGGGAAGATTGTTCATGGGCACGTTTTGAAATGTGGGTTGGACTTGGATTTGTTCGTGGGCAATGCTCTGATTGCGTTTTATTCCAAGTGCCAGGATGTTGAAACTGCTCGGAAGGTGTTTGATGAAATGTCTCTGAGAGACATTGTTAGTTGGAACTCCATGATTGCTGGGTATACTTTGAATGGGAAAGTGGATGAGGCTATTATGCTTTTCCACGCCATGCTGCATAATCAAACTGCTTGCTCACCTGATAATGCAACTCTTGTTGGGATTCTCCCTGCTTGTGTTACAAAATCAGCTTCCCAAGTTGGCTTCTGGGTTCATTCCTACGTTATCAAGACAGGAATGGAAGTTGGGGCCCCGTTGGGCAGTTGCCTTATCTCAATGTATGCTAACTGTGGTCATGTGAACGTTGCAAGAGACGTTTTCGATCGAATCAAGGACAAAAACGTCATCGTATGGAGTGCAATCATAAGGTCTTACGGAATGCATGGTTTTGCAGATGAGGCATTAAACATGTTCACAAGTTTGGAAGAAGCTGGTCTAAAACCAGACGGCGTGATTTTCCTGAATTTGTTGTCGACGTGTAGTCACGCCGGGCTTGTAGAAAAAGGGCGCGAGATATACGAAAAGATGGAGGCTTATGGTGCAGAGAGGAAAGAGGAACATTATGCGTGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCTTAGAACAAGCAGTAGAGTTCATTGAAGGCATGCCAGTGCAGGCAGGGAAAGATGTGTATGGTGCATTGCTTGGTGCTTGTAGGATACACAACAACATAGAGTTAGCTAAAAAAGTTGGGGATAAGTTGTTCGTTTTGGATCCCGAAAACGCAGGGCGATACGTGATCTTAGCTAGTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGAGATAGGAATATTAGAAAGCCGGTTGGTTGCAGTTCAATAGAGATAGATAGGATTAATCATGTGTTTGGGAAGGAGGATGAATCTCACCCTTTCACAGAACAAATTTTTGACACATTGGAGAAGCTTGAAAGGGTAATGGATGAAAATTTTGAACCTATTTAA

mRNA sequence

ATGAATGGGCTCTACCGGCGATCTTCGCGAGCTCTGGTGTCGAGAAATCGACCATTCTTCAGATTTCTAAGATCCATCTTCAACGATTGGAGTCGTAGGGAGTATCATCGCGATTCATACGATTACACGAAGTTATTACAACATTGCAGATCTATCAGAAGCGTTGAAGAACTTCATGCTCAGATCGTTGTTGAAGGTCACGACCAAAATGGATTCTTAGCCACGAAGCTAATTGGTAAATATGCCGAGTATGGCGAGGAAAAAATGGAAATTGCACGGAAGGTGTTCGATAGATTGCTTGAAAAAGATGTGTTCGTATGGAACGTGGTTATTCAAGGGTATGCGAATTGGGGTCCGTTTGCTGAAGCTCTAAACCTGTATGATGAAATGCGGGTCGGTGGCGAACCCACCAATCGCTACACATTTCCTTTTGTGTTGAAGGCATGTGGCGCCATGAAGAACGGTGACAAGGGGAAGATTGTTCATGGGCACGTTTTGAAATGTGGGTTGGACTTGGATTTGTTCGTGGGCAATGCTCTGATTGCGTTTTATTCCAAGTGCCAGGATGTTGAAACTGCTCGGAAGGTGTTTGATGAAATGTCTCTGAGAGACATTGTTAGTTGGAACTCCATGATTGCTGGGTATACTTTGAATGGGAAAGTGGATGAGGCTATTATGCTTTTCCACGCCATGCTGCATAATCAAACTGCTTGCTCACCTGATAATGCAACTCTTGTTGGGATTCTCCCTGCTTGTGTTACAAAATCAGCTTCCCAAGTTGGCTTCTGGGTTCATTCCTACGTTATCAAGACAGGAATGGAAGTTGGGGCCCCGTTGGGCAGTTGCCTTATCTCAATGTATGCTAACTGTGGTCATGTGAACGTTGCAAGAGACGTTTTCGATCGAATCAAGGACAAAAACGTCATCGTATGGAGTGCAATCATAAGGTCTTACGGAATGCATGGTTTTGCAGATGAGGCATTAAACATGTTCACAAGTTTGGAAGAAGCTGGTCTAAAACCAGACGGCGTGATTTTCCTGAATTTGTTGTCGACGTGTAGTCACGCCGGGCTTGTAGAAAAAGGGCGCGAGATATACGAAAAGATGGAGGCTTATGGTGCAGAGAGGAAAGAGGAACATTATGCGTGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCTTAGAACAAGCAGTAGAGTTCATTGAAGGCATGCCAGTGCAGGCAGGGAAAGATGTGTATGGTGCATTGCTTGGTGCTTGTAGGATACACAACAACATAGAGTTAGCTAAAAAAGTTGGGGATAAGTTGTTCGTTTTGGATCCCGAAAACGCAGGGCGATACGTGATCTTAGCTAGTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGAGATAGGAATATTAGAAAGCCGGTTGGTTGCAGTTCAATAGAGATAGATAGGATTAATCATGTGTTTGGGAAGGAGGATGAATCTCACCCTTTCACAGAACAAATTTTTGACACATTGGAGAAGCTTGAAAGGGTAATGGATGAAAATTTTGAACCTATTTAA

Coding sequence (CDS)

ATGAATGGGCTCTACCGGCGATCTTCGCGAGCTCTGGTGTCGAGAAATCGACCATTCTTCAGATTTCTAAGATCCATCTTCAACGATTGGAGTCGTAGGGAGTATCATCGCGATTCATACGATTACACGAAGTTATTACAACATTGCAGATCTATCAGAAGCGTTGAAGAACTTCATGCTCAGATCGTTGTTGAAGGTCACGACCAAAATGGATTCTTAGCCACGAAGCTAATTGGTAAATATGCCGAGTATGGCGAGGAAAAAATGGAAATTGCACGGAAGGTGTTCGATAGATTGCTTGAAAAAGATGTGTTCGTATGGAACGTGGTTATTCAAGGGTATGCGAATTGGGGTCCGTTTGCTGAAGCTCTAAACCTGTATGATGAAATGCGGGTCGGTGGCGAACCCACCAATCGCTACACATTTCCTTTTGTGTTGAAGGCATGTGGCGCCATGAAGAACGGTGACAAGGGGAAGATTGTTCATGGGCACGTTTTGAAATGTGGGTTGGACTTGGATTTGTTCGTGGGCAATGCTCTGATTGCGTTTTATTCCAAGTGCCAGGATGTTGAAACTGCTCGGAAGGTGTTTGATGAAATGTCTCTGAGAGACATTGTTAGTTGGAACTCCATGATTGCTGGGTATACTTTGAATGGGAAAGTGGATGAGGCTATTATGCTTTTCCACGCCATGCTGCATAATCAAACTGCTTGCTCACCTGATAATGCAACTCTTGTTGGGATTCTCCCTGCTTGTGTTACAAAATCAGCTTCCCAAGTTGGCTTCTGGGTTCATTCCTACGTTATCAAGACAGGAATGGAAGTTGGGGCCCCGTTGGGCAGTTGCCTTATCTCAATGTATGCTAACTGTGGTCATGTGAACGTTGCAAGAGACGTTTTCGATCGAATCAAGGACAAAAACGTCATCGTATGGAGTGCAATCATAAGGTCTTACGGAATGCATGGTTTTGCAGATGAGGCATTAAACATGTTCACAAGTTTGGAAGAAGCTGGTCTAAAACCAGACGGCGTGATTTTCCTGAATTTGTTGTCGACGTGTAGTCACGCCGGGCTTGTAGAAAAAGGGCGCGAGATATACGAAAAGATGGAGGCTTATGGTGCAGAGAGGAAAGAGGAACATTATGCGTGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCTTAGAACAAGCAGTAGAGTTCATTGAAGGCATGCCAGTGCAGGCAGGGAAAGATGTGTATGGTGCATTGCTTGGTGCTTGTAGGATACACAACAACATAGAGTTAGCTAAAAAAGTTGGGGATAAGTTGTTCGTTTTGGATCCCGAAAACGCAGGGCGATACGTGATCTTAGCTAGTATGTATGAAGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGAGATAGGAATATTAGAAAGCCGGTTGGTTGCAGTTCAATAGAGATAGATAGGATTAATCATGTGTTTGGGAAGGAGGATGAATCTCACCCTTTCACAGAACAAATTTTTGACACATTGGAGAAGCTTGAAAGGGTAATGGATGAAAATTTTGAACCTATTTAA

Protein sequence

MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI

Homology

[Close]

BLAST of Carg01195 vs. NCBI nr
Match: XP_022942131.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita moschata] >KAG7027809.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 524/524 (100.00%), Postives = 524/524 (100.00%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
           AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]

BLAST of Carg01195 vs. NCBI nr
Match: KAG6596261.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 523/524 (99.81%), Postives = 524/524 (100.00%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSV+ELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
           AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]

BLAST of Carg01195 vs. NCBI nr
Match: XP_023540099.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1062.0 bits (2745), Expect = 1.7e-306
Identity = 514/524 (98.09%), Postives = 522/524 (99.62%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGL+ RSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSV+ELHA
Sbjct: 1   MNGLHWRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QIVVEGHDQNGFLATKLIGKYAEYGEEKM IARKVFDRLLEKDVF+WNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFLWNVVIQGYANWGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
           AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIM+FHAMLHNQTACSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMIFHAMLHNQTACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           DNATLVGILPACVTKSASQVGFWVHSY+IKTGMEVGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYIIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIYE+MEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYERMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIHNNIELAK+VGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]

BLAST of Carg01195 vs. NCBI nr
Match: XP_022971604.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1058.9 bits (2737), Expect = 1.4e-305
Identity = 514/524 (98.09%), Postives = 519/524 (99.05%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGLYRR SRALVSR +PFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSV+ELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QIVVEGHDQNGFLATKLIGKYAEYGEEKM IARKVFDRLLEKDVFVWNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
           AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKN +KGKIVHGHVLKCGLDLDLFVGNAL
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEE GLKPDGVIFLNLLSTCSHAGLVE
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIHNNIELAK+VGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]

BLAST of Carg01195 vs. NCBI nr
Match: XP_038905146.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 944.9 bits (2441), Expect = 3.0e-271
Identity = 452/524 (86.26%), Postives = 489/524 (93.32%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MN L RR+ +AL SRN+P FR LRS F+D S  +YHRDSYDYTKLL HCR+IRSV+ LHA
Sbjct: 1   MNELCRRTPQALASRNQPCFRLLRSFFSDRSSGKYHRDSYDYTKLLDHCRTIRSVQGLHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIGKY E+GE KM IARKVFD+LL++DVFVWNVVIQGYAN GPF
Sbjct: 61  QIIVEGQDQNGFLATKLIGKYVEHGESKMGIARKVFDKLLQRDVFVWNVVIQGYANLGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
            EALNL+DEMRV G PTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFV NAL
Sbjct: 121 VEALNLFDEMRVSGAPTNRYTFPFVLKACGAMKNSDKGKIVHGHVLKCGLDLDLFVSNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFY+KCQDVETARKVFDEMSLRDIVSWNSMIAGYTLN KV++AIMLFHAMLHNQ+ACSP
Sbjct: 181 IAFYAKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNEKVEDAIMLFHAMLHNQSACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           D+ATL+GILPACVTKSASQVGFWVHSYVIKTGMEVGA LGSCLIS+YANCGHVN+ARDVF
Sbjct: 241 DSATLLGILPACVTKSASQVGFWVHSYVIKTGMEVGAQLGSCLISVYANCGHVNIARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           +RI DKNVIVWSAIIR YGMHGFADEALNMFT LEEAGLKPDGV+FLNLLSTCSHAGL+ 
Sbjct: 301 NRIDDKNVIVWSAIIRCYGMHGFADEALNMFTRLEEAGLKPDGVLFLNLLSTCSHAGLIA 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KG EIYEKME YG ERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGHEIYEKMEGYGVERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIH NIELAK++G+KLF+LD +NAGRY+ILASMYEDAGQWEDAAKLRKLLRDRN+RKPVG
Sbjct: 421 RIHKNIELAKEIGEKLFILDSQNAGRYMILASMYEDAGQWEDAAKLRKLLRDRNVRKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIE+DRI+HVFGKEDE+HPFTEQIFDTLEKLE +M+ +FEPI
Sbjct: 481 CSSIEVDRIHHVFGKEDETHPFTEQIFDTLEKLESIMEADFEPI 524

[Close]

BLAST of Carg01195 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 3.6e-102
Identity = 184/477 (38.57%), Postives = 294/477 (61.64%), Query Frame = 0


Query: 48  HCRSIRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVW 107
           H  S+     +H  I+  G DQ+ FLATKLIG Y++ G   ++ ARKVFD+  ++ ++VW
Sbjct: 89  HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG--SVDYARKVFDKTRKRTIYVW 148

Query: 108 NVVIQGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLKACGA----MKNGDKGKIVHG 167
           N + +     G   E L LY +M   G  ++R+T+ +VLKAC A    + +  KGK +H 
Sbjct: 149 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 208

Query: 168 HVLKCGLDLDLFVGNALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDE 227
           H+ + G    +++   L+  Y++   V+ A  VF  M +R++VSW++MIA Y  NGK  E
Sbjct: 209 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 268

Query: 228 AIMLFHAMLHNQTACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCL 287
           A+  F  M+      SP++ T+V +L AC + +A + G  +H Y+++ G++   P+ S L
Sbjct: 269 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 328

Query: 288 ISMYANCGHVNVARDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDG 347
           ++MY  CG + V + VFDR+ D++V+ W+++I SYG+HG+  +A+ +F  +   G  P  
Sbjct: 329 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 388

Query: 348 VIFLNLLSTCSHAGLVEKGREIYEKM-EAYGAERKEEHYACMVDLLGRAGFLEQAVEFIE 407
           V F+++L  CSH GLVE+G+ ++E M   +G + + EHYACMVDLLGRA  L++A + ++
Sbjct: 389 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 448

Query: 408 GMPVQAGKDVYGALLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWED 467
            M  + G  V+G+LLG+CRIH N+ELA++   +LF L+P+NAG YV+LA +Y +A  W++
Sbjct: 449 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 508

Query: 468 AAKLRKLLRDRNIRKPVGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDE 520
             +++KLL  R ++K  G   +E+ R  + F   DE +P  EQI   L KL   M E
Sbjct: 509 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563

[Close]

BLAST of Carg01195 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 2.4e-98
Identity = 189/529 (35.73%), Postives = 306/529 (57.84%), Query Frame = 0


Query: 31  SRREYHRDSYDYTKLLQHCRSIRSV---EELHAQIVVEGHDQNGFLATKLIGKYAEYGEE 90
           S  + + + Y +  L++    + S+   + LH   V      + F+A  LI  Y   G+ 
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD- 182

Query: 91  KMEIARKVFDRLLEKDVFVWNVVIQGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLK 150
            ++ A KVF  + EKDV  WN +I G+   G   +AL L+ +M       +  T   VL 
Sbjct: 183 -LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 242

Query: 151 ACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNALIAFYSKC-------------------- 210
           AC  ++N + G+ V  ++ +  ++++L + NA++  Y+KC                    
Sbjct: 243 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 302

Query: 211 -----------QDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQT 270
                      +D E AR+V + M  +DIV+WN++I+ Y  NGK +EA+++FH  L  Q 
Sbjct: 303 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQK 362

Query: 271 ACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVA 330
               +  TLV  L AC    A ++G W+HSY+ K G+ +   + S LI MY+ CG +  +
Sbjct: 363 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 422

Query: 331 RDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHA 390
           R+VF+ ++ ++V VWSA+I    MHG  +EA++MF  ++EA +KP+GV F N+   CSH 
Sbjct: 423 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 482

Query: 391 GLVEKGREIYEKMEA-YGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGA 450
           GLV++   ++ +ME+ YG   +E+HYAC+VD+LGR+G+LE+AV+FIE MP+     V+GA
Sbjct: 483 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 542

Query: 451 LLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNI 510
           LLGAC+IH N+ LA+    +L  L+P N G +V+L+++Y   G+WE+ ++LRK +R   +
Sbjct: 543 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 602

Query: 511 RKPVGCSSIEIDRINHVFGKEDESHPFTEQIFDTL-EKLERVMDENFEP 524
           +K  GCSSIEID + H F   D +HP +E+++  L E +E++    +EP
Sbjct: 603 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEP 648

[Close]

BLAST of Carg01195 vs. ExPASy Swiss-Prot
Match: P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.8e-94
Identity = 186/535 (34.77%), Postives = 291/535 (54.39%), Query Frame = 0


Query: 52  IRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVI 111
           IR++  +H++I++E    N  L  KL+  YA    + +  ARKVFD + E++V + NV+I
Sbjct: 55  IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASL--KDVASARKVFDEIPERNVIIINVMI 114

Query: 112 QGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLD 171
           + Y N G + E + ++  M       + YTFP VLKAC        G+ +HG   K GL 
Sbjct: 115 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 174

Query: 172 LDLFVGNALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAM 231
             LFVGN L++ Y KC  +  AR V DEMS RD+VSWNS++ GY  N + D+A+ +   M
Sbjct: 175 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 234

Query: 232 ------------------LHNQT------------------------------------- 291
                             + N T                                     
Sbjct: 235 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 294

Query: 292 -----------ACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLIS 351
                         PD  ++  +LPAC   SA  +G  +H Y+ +  +     L + LI 
Sbjct: 295 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 354

Query: 352 MYANCGHVNVARDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVI 411
           MYA CG +  ARDVF+ +K ++V+ W+A+I +YG  G   +A+ +F+ L+++GL PD + 
Sbjct: 355 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 414

Query: 412 FLNLLSTCSHAGLVEKGREIYEKM-EAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGM 471
           F+  L+ CSHAGL+E+GR  ++ M + Y    + EH ACMVDLLGRAG +++A  FI+ M
Sbjct: 415 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 474

Query: 472 PVQAGKDVYGALLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAA 520
            ++  + V+GALLGACR+H++ ++     DKLF L PE +G YV+L+++Y  AG+WE+  
Sbjct: 475 SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVT 534

[Close]

BLAST of Carg01195 vs. ExPASy Swiss-Prot
Match: P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 4.7e-94
Identity = 177/493 (35.90%), Postives = 292/493 (59.23%), Query Frame = 0


Query: 38  DSYDYTKLLQHCRSIRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFD 97
           +S  Y  +++    ++ ++++HA ++V G+ ++  L TKLI          +     +F 
Sbjct: 8   NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLI--TLACSARAIAYTHLLFL 67

Query: 98  RLLEKDVFVWNVVIQGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDK 157
            +   D F++N VI+  +        +  Y  M       + YTF  V+K+C  +     
Sbjct: 68  SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 127

Query: 158 GKIVHGHVLKCGLDLDLFVGNALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTL 217
           GK VH H +  G  LD +V  AL+ FYSKC D+E AR+VFD M  + IV+WNS+++G+  
Sbjct: 128 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 187

Query: 218 NGKVDEAIMLFHAMLHNQTACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGA 277
           NG  DEAI +F+ M   ++   PD+AT V +L AC    A  +G WVH Y+I  G+++  
Sbjct: 188 NGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV 247

Query: 278 PLGSCLISMYANCGHVNVARDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLE-E 337
            LG+ LI++Y+ CG V  AR+VFD++K+ NV  W+A+I +YG HG+  +A+ +F  +E +
Sbjct: 248 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 307

Query: 338 AGLKPDGVIFLNLLSTCSHAGLVEKGREIYEKM-EAYGAERKEEHYACMVDLLGRAGFLE 397
            G  P+ V F+ +LS C+HAGLVE+GR +Y++M ++Y      EH+ CMVD+LGRAGFL+
Sbjct: 308 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 367

Query: 398 QAVEFIEGMPV---QAGKDVYGALLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILAS 457
           +A +FI  +          ++ A+LGAC++H N +L  ++  +L  L+P+N G +V+L++
Sbjct: 368 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 427

Query: 458 MYEDAGQWEDAAKLRKLLRDRNIRKPVGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEK 517
           +Y  +G+ ++ + +R  +   N+RK VG S IE++   ++F   DESH  T +I+  LE 
Sbjct: 428 IYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLET 487

Query: 518 L-ERVMDENFEPI 525
           L  R  +  + P+
Sbjct: 488 LISRCKEIGYAPV 496

[Close]

BLAST of Carg01195 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 8.0e-94
Identity = 178/517 (34.43%), Postives = 294/517 (56.87%), Query Frame = 0


Query: 38  DSYDYTKLLQHC---RSIRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEK------ 97
           +SY +  +L+ C   ++ +  +++H  ++  G D + ++ T LI  Y + G  +      
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 98  -----------------------MEIARKVFDRLLEKDVFVWNVVIQGYANWGPFAEALN 157
                                  +E A+K+FD +  KDV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 158 LYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNALIAFYS 217
           L+ +M       +  T   V+ AC    + + G+ VH  +   G   +L + NALI  YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 218 KCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSPDNATL 277
           KC ++ETA  +F+ +  +D++SWN++I GYT      EA++LF  ML  ++  +P++ T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML--RSGETPNDVTM 372

Query: 278 VGILPACVTKSASQVGFWVHSYVIK--TGMEVGAPLGSCLISMYANCGHVNVARDVFDRI 337
           + ILPAC    A  +G W+H Y+ K   G+   + L + LI MYA CG +  A  VF+ I
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432

Query: 338 KDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVEKGR 397
             K++  W+A+I  + MHG AD + ++F+ + + G++PD + F+ LLS CSH+G+++ GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492

Query: 398 EIYEKM-EAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 457
            I+  M + Y    K EHY CM+DLLG +G  ++A E I  M ++    ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552

Query: 458 HNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVGCS 517
           H N+EL +   + L  ++PEN G YV+L+++Y  AG+W + AK R LL D+ ++K  GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612

Query: 518 SIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDE 520
           SIEID + H F   D+ HP   +I+  LE++E ++++
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

[Close]

BLAST of Carg01195 vs. ExPASy TrEMBL
Match: A0A6J1FMZ9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447289 PE=4 SV=1)

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 524/524 (100.00%), Postives = 524/524 (100.00%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
           AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]

BLAST of Carg01195 vs. ExPASy TrEMBL
Match: A0A6J1I919 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470278 PE=4 SV=1)

HSP 1 Score: 1058.9 bits (2737), Expect = 6.8e-306
Identity = 514/524 (98.09%), Postives = 519/524 (99.05%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGLYRR SRALVSR +PFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSV+ELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QIVVEGHDQNGFLATKLIGKYAEYGEEKM IARKVFDRLLEKDVFVWNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
           AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKN +KGKIVHGHVLKCGLDLDLFVGNAL
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEE GLKPDGVIFLNLLSTCSHAGLVE
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIHNNIELAK+VGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

[Close]

BLAST of Carg01195 vs. ExPASy TrEMBL
Match: A0A6J1CVV9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111014767 PE=4 SV=1)

HSP 1 Score: 936.8 bits (2420), Expect = 3.9e-269
Identity = 446/524 (85.11%), Postives = 487/524 (92.94%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           M GL RR SR LV +N+PFFRFLR   +D S  EY RDSYDYT LLQHCR+IRSV+ELHA
Sbjct: 1   MRGLRRRLSRTLVLKNQPFFRFLRFFLSDRSPGEYRRDSYDYTNLLQHCRTIRSVQELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIGKYAE+G+ KM +ARKVFDRL+E+DVFVWNVVI+GYANWGPF
Sbjct: 61  QIIVEGLDQNGFLATKLIGKYAEHGDSKMGVARKVFDRLVERDVFVWNVVIRGYANWGPF 120

Query: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
            EALNL+DEMRV G PTNRYTFPFVLKACGAMKN DKGK+VHGHVLK GLDLDLFVGNAL
Sbjct: 121 DEALNLFDEMRVNGAPTNRYTFPFVLKACGAMKNRDKGKVVHGHVLKSGLDLDLFVGNAL 180

Query: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
           IAFY+KC D+ET RKVFDEM L+DIVSWNSMIAG+T NGKVDEAIMLFHAM+HNQ ACSP
Sbjct: 181 IAFYAKCLDIETTRKVFDEMPLKDIVSWNSMIAGFTSNGKVDEAIMLFHAMVHNQGACSP 240

Query: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
           DNATLVGILPACV+KSA+QVGFWVHSYVIKTGM+VGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVSKSAAQVGFWVHSYVIKTGMQVGAPLGSCLISMYANCGHVNIARDVF 300

Query: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
           +RI DKNVIVWSA+IR YGMHG ADEAL MFTSLEE GLKPDGVIFLNLLSTCSHAGLV 
Sbjct: 301 NRIDDKNVIVWSAVIRCYGMHGLADEALTMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVA 360

Query: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGR+IYEKME YG ERKEEHYACMVDLLGRAGF++QAV+FIEGMP+QAGKDVYGALLGAC
Sbjct: 361 KGRQIYEKMETYGVERKEEHYACMVDLLGRAGFVDQAVKFIEGMPMQAGKDVYGALLGAC 420

Query: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
           RIHNNIE+AK+  +KLFVLDPENAGRYVILASM+EDAGQWEDAAKLRKLLRDR I+KPVG
Sbjct: 421 RIHNNIEVAKEAAEKLFVLDPENAGRYVILASMHEDAGQWEDAAKLRKLLRDRKIKKPVG 480

Query: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
           CSSIEIDRI+HVFGKEDESHPF+EQIFDTLEKLER+M+E+FEP+
Sbjct: 481 CSSIEIDRIHHVFGKEDESHPFSEQIFDTLEKLERIMEEDFEPV 524

[Close]

BLAST of Carg01195 vs. ExPASy TrEMBL
Match: A0A0A0L101 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 2.4e-258
Identity = 434/526 (82.51%), Postives = 472/526 (89.73%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGL RR+ +AL  RN+PF       F++WS  +YHRDSY + KLL HCRSIRSV+ELHA
Sbjct: 1   MNGLCRRTWQALTFRNQPF-------FSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWG 120
           QI+VEG DQNGF+A KLIGKY E+  GE KM  ARKVFD L+ +DVFVWNVVIQGYA+ G
Sbjct: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120

Query: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGAMKN DKG+IVHGHV+KCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240
           ALIAFYSKCQDVETARKVFD+MSLRDIVSWNSMI GYTLNGK DEAIM FHAMLHNQ  C
Sbjct: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240

Query: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARD 300
           +PD+ATLV ILPAC TKSASQVGFWVHSYVIKTG+EVGAPLGSCLI MY NCGHVN+ARD
Sbjct: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300

Query: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGL 360
           VFDRI DKNVIVWSAIIR YGMHGFADEA NMF  LEEAG+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360

Query: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           V KG EIYEKMEAYG ERK+ HYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VAKGHEIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 421 ACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNN+ELAK+VG+KLF+LDPE A RYV LA+MYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 481 VGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
            GCSSIE+DRI+HVFGK+DE+HP TE+IFDTLEKLER+M+E+FEPI
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 519

[Close]

BLAST of Carg01195 vs. ExPASy TrEMBL
Match: A0A5A7UCB1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00430 PE=4 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 9.7e-252
Identity = 421/526 (80.04%), Postives = 471/526 (89.54%), Query Frame = 0


Query: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
           MNGLYRR+ +AL  R++PFF   RS        +YHRDSYD+ KLL HCR+IRSV+ELHA
Sbjct: 1   MNGLYRRTWQALTFRSQPFFSERRS-------GKYHRDSYDFMKLLGHCRTIRSVQELHA 60

Query: 61  QIVVEGHDQNGFLATKLIGKYAEY--GEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWG 120
           QI+VEG DQNGFLATKLIGKY E   GE KM  ARKVFDRLL++DVF+WNVVIQGYA++G
Sbjct: 61  QILVEGLDQNGFLATKLIGKYVELGEGESKMGTARKVFDRLLQRDVFLWNVVIQGYASFG 120

Query: 121 PFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGN 180
           PF EALNL+DEMRV GEPTNRYTFPFVLKACGA+KN DKG+IVHG+V+KCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGN 180

Query: 181 ALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTAC 240
           ALI+ YSKCQDVETARKVFD+MSLRD VSWNSMI GYTLN + D+AIM FHAMLHNQ  C
Sbjct: 181 ALISCYSKCQDVETARKVFDDMSLRDTVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADC 240

Query: 241 SPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARD 300
            PD+ATLV ILPAC TKSASQVGFWVHSY+IKTGMEVGA LGSCLISMY NCGH+N+ARD
Sbjct: 241 LPDDATLVAILPACATKSASQVGFWVHSYIIKTGMEVGASLGSCLISMYGNCGHINIARD 300

Query: 301 VFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGL 360
           VF+RI +KNVIVWSAIIR YGMHG ADEALNMF  LEE G+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFNRIDNKNVIVWSAIIRCYGMHGLADEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGL 360

Query: 361 VEKGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
           V KGREIY+KMEAYG ER ++HYACMVDLL RAGFLEQA EFIE MPVQAGKDVYGAL G
Sbjct: 361 VAKGREIYKKMEAYGLERNDKHYACMVDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFG 420

Query: 421 ACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 480
           ACRIHNN+ELAK+VG+KLF+LDPENAGRY+ILASMYEDAGQWEDAAK+RKLLRDRNI+KP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPENAGRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKP 480

Query: 481 VGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 525
            GCSSIE+DRI+HVFGK+DE+HPFTE+IFDT+EKLER+M+E+FEPI
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPFTEEIFDTIEKLERLMEEDFEPI 519

[Close]

BLAST of Carg01195 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 373.6 bits (958), Expect = 2.5e-103
Identity = 184/477 (38.57%), Postives = 294/477 (61.64%), Query Frame = 0


Query: 48  HCRSIRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVW 107
           H  S+     +H  I+  G DQ+ FLATKLIG Y++ G   ++ ARKVFD+  ++ ++VW
Sbjct: 89  HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG--SVDYARKVFDKTRKRTIYVW 148

Query: 108 NVVIQGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLKACGA----MKNGDKGKIVHG 167
           N + +     G   E L LY +M   G  ++R+T+ +VLKAC A    + +  KGK +H 
Sbjct: 149 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 208

Query: 168 HVLKCGLDLDLFVGNALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDE 227
           H+ + G    +++   L+  Y++   V+ A  VF  M +R++VSW++MIA Y  NGK  E
Sbjct: 209 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 268

Query: 228 AIMLFHAMLHNQTACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCL 287
           A+  F  M+      SP++ T+V +L AC + +A + G  +H Y+++ G++   P+ S L
Sbjct: 269 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 328

Query: 288 ISMYANCGHVNVARDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDG 347
           ++MY  CG + V + VFDR+ D++V+ W+++I SYG+HG+  +A+ +F  +   G  P  
Sbjct: 329 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 388

Query: 348 VIFLNLLSTCSHAGLVEKGREIYEKM-EAYGAERKEEHYACMVDLLGRAGFLEQAVEFIE 407
           V F+++L  CSH GLVE+G+ ++E M   +G + + EHYACMVDLLGRA  L++A + ++
Sbjct: 389 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 448

Query: 408 GMPVQAGKDVYGALLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWED 467
            M  + G  V+G+LLG+CRIH N+ELA++   +LF L+P+NAG YV+LA +Y +A  W++
Sbjct: 449 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 508

Query: 468 AAKLRKLLRDRNIRKPVGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDE 520
             +++KLL  R ++K  G   +E+ R  + F   DE +P  EQI   L KL   M E
Sbjct: 509 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563

[Close]

BLAST of Carg01195 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 360.9 bits (925), Expect = 1.7e-99
Identity = 189/529 (35.73%), Postives = 306/529 (57.84%), Query Frame = 0


Query: 31  SRREYHRDSYDYTKLLQHCRSIRSV---EELHAQIVVEGHDQNGFLATKLIGKYAEYGEE 90
           S  + + + Y +  L++    + S+   + LH   V      + F+A  LI  Y   G+ 
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD- 182

Query: 91  KMEIARKVFDRLLEKDVFVWNVVIQGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLK 150
            ++ A KVF  + EKDV  WN +I G+   G   +AL L+ +M       +  T   VL 
Sbjct: 183 -LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 242

Query: 151 ACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNALIAFYSKC-------------------- 210
           AC  ++N + G+ V  ++ +  ++++L + NA++  Y+KC                    
Sbjct: 243 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 302

Query: 211 -----------QDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQT 270
                      +D E AR+V + M  +DIV+WN++I+ Y  NGK +EA+++FH  L  Q 
Sbjct: 303 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQK 362

Query: 271 ACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVA 330
               +  TLV  L AC    A ++G W+HSY+ K G+ +   + S LI MY+ CG +  +
Sbjct: 363 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 422

Query: 331 RDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHA 390
           R+VF+ ++ ++V VWSA+I    MHG  +EA++MF  ++EA +KP+GV F N+   CSH 
Sbjct: 423 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 482

Query: 391 GLVEKGREIYEKMEA-YGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGA 450
           GLV++   ++ +ME+ YG   +E+HYAC+VD+LGR+G+LE+AV+FIE MP+     V+GA
Sbjct: 483 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 542

Query: 451 LLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNI 510
           LLGAC+IH N+ LA+    +L  L+P N G +V+L+++Y   G+WE+ ++LRK +R   +
Sbjct: 543 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 602

Query: 511 RKPVGCSSIEIDRINHVFGKEDESHPFTEQIFDTL-EKLERVMDENFEP 524
           +K  GCSSIEID + H F   D +HP +E+++  L E +E++    +EP
Sbjct: 603 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEP 648

[Close]

BLAST of Carg01195 vs. TAIR 10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 347.4 bits (890), Expect = 2.0e-95
Identity = 186/535 (34.77%), Postives = 291/535 (54.39%), Query Frame = 0


Query: 52  IRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVI 111
           IR++  +H++I++E    N  L  KL+  YA    + +  ARKVFD + E++V + NV+I
Sbjct: 55  IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASL--KDVASARKVFDEIPERNVIIINVMI 114

Query: 112 QGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLD 171
           + Y N G + E + ++  M       + YTFP VLKAC        G+ +HG   K GL 
Sbjct: 115 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 174

Query: 172 LDLFVGNALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAM 231
             LFVGN L++ Y KC  +  AR V DEMS RD+VSWNS++ GY  N + D+A+ +   M
Sbjct: 175 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 234

Query: 232 ------------------LHNQT------------------------------------- 291
                             + N T                                     
Sbjct: 235 ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 294

Query: 292 -----------ACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLIS 351
                         PD  ++  +LPAC   SA  +G  +H Y+ +  +     L + LI 
Sbjct: 295 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 354

Query: 352 MYANCGHVNVARDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVI 411
           MYA CG +  ARDVF+ +K ++V+ W+A+I +YG  G   +A+ +F+ L+++GL PD + 
Sbjct: 355 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 414

Query: 412 FLNLLSTCSHAGLVEKGREIYEKM-EAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGM 471
           F+  L+ CSHAGL+E+GR  ++ M + Y    + EH ACMVDLLGRAG +++A  FI+ M
Sbjct: 415 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 474

Query: 472 PVQAGKDVYGALLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAA 520
            ++  + V+GALLGACR+H++ ++     DKLF L PE +G YV+L+++Y  AG+WE+  
Sbjct: 475 SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVT 534

[Close]

BLAST of Carg01195 vs. TAIR 10
Match: AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 346.7 bits (888), Expect = 3.3e-95
Identity = 177/493 (35.90%), Postives = 292/493 (59.23%), Query Frame = 0


Query: 38  DSYDYTKLLQHCRSIRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFD 97
           +S  Y  +++    ++ ++++HA ++V G+ ++  L TKLI          +     +F 
Sbjct: 8   NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLI--TLACSARAIAYTHLLFL 67

Query: 98  RLLEKDVFVWNVVIQGYANWGPFAEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDK 157
            +   D F++N VI+  +        +  Y  M       + YTF  V+K+C  +     
Sbjct: 68  SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 127

Query: 158 GKIVHGHVLKCGLDLDLFVGNALIAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTL 217
           GK VH H +  G  LD +V  AL+ FYSKC D+E AR+VFD M  + IV+WNS+++G+  
Sbjct: 128 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 187

Query: 218 NGKVDEAIMLFHAMLHNQTACSPDNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGA 277
           NG  DEAI +F+ M   ++   PD+AT V +L AC    A  +G WVH Y+I  G+++  
Sbjct: 188 NGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV 247

Query: 278 PLGSCLISMYANCGHVNVARDVFDRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLE-E 337
            LG+ LI++Y+ CG V  AR+VFD++K+ NV  W+A+I +YG HG+  +A+ +F  +E +
Sbjct: 248 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 307

Query: 338 AGLKPDGVIFLNLLSTCSHAGLVEKGREIYEKM-EAYGAERKEEHYACMVDLLGRAGFLE 397
            G  P+ V F+ +LS C+HAGLVE+GR +Y++M ++Y      EH+ CMVD+LGRAGFL+
Sbjct: 308 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 367

Query: 398 QAVEFIEGMPV---QAGKDVYGALLGACRIHNNIELAKKVGDKLFVLDPENAGRYVILAS 457
           +A +FI  +          ++ A+LGAC++H N +L  ++  +L  L+P+N G +V+L++
Sbjct: 368 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 427

Query: 458 MYEDAGQWEDAAKLRKLLRDRNIRKPVGCSSIEIDRINHVFGKEDESHPFTEQIFDTLEK 517
           +Y  +G+ ++ + +R  +   N+RK VG S IE++   ++F   DESH  T +I+  LE 
Sbjct: 428 IYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLET 487

Query: 518 L-ERVMDENFEPI 525
           L  R  +  + P+
Sbjct: 488 LISRCKEIGYAPV 496

[Close]

BLAST of Carg01195 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 345.9 bits (886), Expect = 5.7e-95
Identity = 178/517 (34.43%), Postives = 294/517 (56.87%), Query Frame = 0


Query: 38  DSYDYTKLLQHC---RSIRSVEELHAQIVVEGHDQNGFLATKLIGKYAEYGEEK------ 97
           +SY +  +L+ C   ++ +  +++H  ++  G D + ++ T LI  Y + G  +      
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 98  -----------------------MEIARKVFDRLLEKDVFVWNVVIQGYANWGPFAEALN 157
                                  +E A+K+FD +  KDV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 158 LYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNALIAFYS 217
           L+ +M       +  T   V+ AC    + + G+ VH  +   G   +L + NALI  YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 218 KCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSPDNATL 277
           KC ++ETA  +F+ +  +D++SWN++I GYT      EA++LF  ML  ++  +P++ T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML--RSGETPNDVTM 372

Query: 278 VGILPACVTKSASQVGFWVHSYVIK--TGMEVGAPLGSCLISMYANCGHVNVARDVFDRI 337
           + ILPAC    A  +G W+H Y+ K   G+   + L + LI MYA CG +  A  VF+ I
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432

Query: 338 KDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVEKGR 397
             K++  W+A+I  + MHG AD + ++F+ + + G++PD + F+ LLS CSH+G+++ GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492

Query: 398 EIYEKM-EAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 457
            I+  M + Y    K EHY CM+DLLG +G  ++A E I  M ++    ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552

Query: 458 HNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVGCS 517
           H N+EL +   + L  ++PEN G YV+L+++Y  AG+W + AK R LL D+ ++K  GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612

Query: 518 SIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDE 520
           SIEID + H F   D+ HP   +I+  LE++E ++++
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

The following BLAST results are available for this feature:

BLAST of Carg01195 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942131.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
KAG6596261.1	0.0e+00	99.81	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_023540099.1	1.7e-306	98.09	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
XP_022971604.1	1.4e-305	98.09	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
XP_038905146.1	3.0e-271	86.26	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benin...	[more]

BLAST of Carg01195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF3	3.6e-102	38.57	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
O82380	2.4e-98	35.73	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
P0C899	2.8e-94	34.77	Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th...	[more]
P93011	4.7e-94	35.90	Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	8.0e-94	34.43	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]

BLAST of Carg01195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMZ9	0.0e+00	100.00	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
A0A6J1I919	6.8e-306	98.09	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
A0A6J1CVV9	3.9e-269	85.11	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Mom...	[more]
A0A0A0L101	2.4e-258	82.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1	[more]
A0A5A7UCB1	9.7e-252	80.04	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg01195 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46790.1	2.5e-103	38.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	1.7e-99	35.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49142.1	2.0e-95	34.77	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G33760.1	3.3e-95	35.90	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	5.7e-95	34.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 178..203 e-value: 0.018 score: 15.2 coord: 381..404 e-value: 0.88 score: 10.0 coord: 310..339 e-value: 7.9E-4 score: 19.5 coord: 281..308 e-value: 0.045 score: 14.0 coord: 345..373 e-value: 0.08 score: 13.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 204..252 e-value: 2.3E-8 score: 34.1 coord: 102..149 e-value: 1.1E-8 score: 35.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 106..133 e-value: 2.9E-5 score: 21.9 coord: 206..233 e-value: 3.9E-6 score: 24.7 coord: 178..206 e-value: 2.4E-4 score: 19.0 coord: 310..342 e-value: 3.6E-5 score: 21.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 307..341 score: 10.950397
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 204..234 score: 10.226951
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 342..376 score: 8.506026
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 103..137 score: 10.259834
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 160..261 e-value: 5.0E-20 score: 73.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 19..159 e-value: 8.3E-17 score: 63.5 coord: 281..511 e-value: 2.2E-33 score: 117.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 84..477
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 30..520
None	No IPR available	PANTHER	PTHR24015:SF1933	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 30..520

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01195-RA	Carg01195-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding