Carg01173 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01173
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PIG-H domain-containing protein
Location	Carg_Chr06: 837024 .. 839025 (+)
RNA-Seq Expression	Carg01173
Synteny	Carg01173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGTTTTCGATTACGGATTGGAGATACGGGTACTTTTCCGATAGTAAATGGCAATCTGAAGCAGTTGATATCCATCACGTTGTTGTTCTTAGGAATAGGAGTAATGGAAAGGGTTTCCTGTTCTACATTCTTGCTGCCCTTGCGTTCTGTTTTTTCATACTCAAGGTAATTTGTCATTCTCATTTAATTTTTGATGTGTAGTTTGAAATTCAACAGTACAGAGTTCCTCGTTCTTGCTAATTTGACTCTGATTTCGTGATGTTCATGTCTGTTTCTTTGGTATCCCTGCTTATTTGCTTCCTGTATTCTAAATATGTTTGTGATTGTTTACTGTTCAATTTTATTGCTTTTGAATATCAGTTCTCTTCCACGTACTTACTTGAATAGGATCTGATTTTGTACGTATGTGTTCTTGAGTTCTAAATATGCCAATTTTATTGCAGGTCTCCTCTTTTAAACTATTGTTATTAATGCCTGTGTCCTTTCTTTGGATATTGTTAAGAAAACTTGCACCAAAAAATTCCATAGTTGATTGATATTGATTGAACCGAACTGCCAAAATATTTGCATAAGCGGAAGTAATGGTATCAATGGATATGTGAGATCCCACATCTGTTGGGAGGAGAACAAAACATTTTTTATAAATGTGTGGAAACCTCTCCTTAGTAGACGCGTTTGAAAAGCCTCGAGGGGAAACCTGGAGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGCCGTTATAGGATAGGATTACTTTTGATATTCTAACAACACACTTTGAAATCTGTTGAAGTTTTTTTTCAGTGCATGATCAATTGACTCTGGGTTTAACAGGGCCAATCGATCTTTGCTGTCTTATGGTGCTGGGTCTTGAATGTATTGTTTGCCAAGAAGCTGTTCAAGGGAACGGTTGAGAAAGGTGAGGAATTGAGGAAGTTCTGTCTCATACGTTATAATTAATGCAATAGTGTGATCATTTGTTGAAATTTAAGTTCTTGCTCTCATCACTATCCTCTTGATGGATGGGGACGTCTAAATGTGCAGAATCTGTTATGGTTATGCCAAATTTCGGAGTCCAACTCGAAACTCACTATACTAGGTAACTTTTTCCTTCTGTAATTCAGTTTCATTGTCTTGAACTTTCTTATTCAAGGCATCATATATAGCATTGGCTAGTGAAGTTTGGTAATCCTCTGGGATTTGATATCCTTAATTCTTCAACTATTGGGACTACCTCAAACCTTTGCAGTTCATGTTGCCGAATCTAATCGACGTATCAGTTCATCGTTACACACACATAGTTGTGCCTTCTGTATTAGTTTTGCAGATTCTCCCAGGTTCTTATCTGTTCTTTGTCTCTTATTGTAGTGGAAAAGTCATCTGTCGGTTCGTACCAGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGTAACTTTATTGTTTACTTAAGATTTCCTGGTCTGTCCCATGAGCCATATATGATAAATGATGGTAGCAGCGGAATTTTTCTTGTCGATCGTATCTTATTCGGTGGATCCCTCTTGTTCCTATTTAGCAGTGATAAAGAGGATAGAAAATGTAGAATAAAGGATTGTTTTACTCACTCGTTAATCCCTAAGTTTAAGAACGTTTATCTTTTTACTAATTAATTTTGAGTTTAGTTTCTACTTGGCATCTAGATTTCAAAATGTTACATTTTTACTCGTGAAATTTGTCAAAACGGTGAGTCATGATGAGCATTATATATTGTTGTGTTATACCAGCTGAAAATTATTCTTTCCCCTCTAGGAATTACGTCCACCGGTGAAAATGTTGGTGCCTATCTGGAAGGCTTTATGTGCTGGTAAAAACAAAGATGCCTGTTCATAAAGCGATCAGCAATTAGCCATAGCTCCCAGCCACAGTCTTGTA

mRNA sequence

ATGGCCAAGTTTTCGATTACGGATTGGAGATACGGGTACTTTTCCGATAGTAAATGGCAATCTGAAGCAGTTGATATCCATCACGTTGTTGTTCTTAGGAATAGGAGTAATGGAAAGGGTTTCCTGTTCTACATTCTTGCTGCCCTTGCGTTCTGTTTTTTCATACTCAAGGGCCAATCGATCTTTGCTGTCTTATGGTGCTGGGTCTTGAATGTATTGTTTGCCAAGAAGCTGTTCAAGGGAACGGTTGAGAAAGAATCTGTTATGGTTATGCCAAATTTCGGAGTCCAACTCGAAACTCACTATACTAGTGGAAAAGTCATCTGTCGGTTCGTACCAGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGAATTACGTCCACCGGTGAAAATGTTGGTGCCTATCTGGAAGGCTTTATGTGCTGGTAAAAACAAAGATGCCTGTTCATAAAGCGATCAGCAATTAGCCATAGCTCCCAGCCACAGTCTTGTA

Coding sequence (CDS)

ATGGCCAAGTTTTCGATTACGGATTGGAGATACGGGTACTTTTCCGATAGTAAATGGCAATCTGAAGCAGTTGATATCCATCACGTTGTTGTTCTTAGGAATAGGAGTAATGGAAAGGGTTTCCTGTTCTACATTCTTGCTGCCCTTGCGTTCTGTTTTTTCATACTCAAGGGCCAATCGATCTTTGCTGTCTTATGGTGCTGGGTCTTGAATGTATTGTTTGCCAAGAAGCTGTTCAAGGGAACGGTTGAGAAAGAATCTGTTATGGTTATGCCAAATTTCGGAGTCCAACTCGAAACTCACTATACTAGTGGAAAAGTCATCTGTCGGTTCGTACCAGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGAATTACGTCCACCGGTGAAAATGTTGGTGCCTATCTGGAAGGCTTTATGTGCTGGTAAAAACAAAGATGCCTGTTCATAA

Protein sequence

MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQSIFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS

Homology

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: KAG7027831.1 (hypothetical protein SDJN02_09008, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.0 bits (933), Expect = 7.3e-97
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: KAG6596280.1 (hypothetical protein SDJN03_09460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.1 bits (928), Expect = 2.8e-96
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHY SGKVICRFVPVDKILKP
Sbjct: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYASGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_022946831.1 (uncharacterized protein LOC111450501 [Cucurbita moschata])

HSP 1 Score: 360.9 bits (925), Expect = 6.2e-96
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCW+LNVLFAKKLFKGTV+KESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWILNVLFAKKLFKGTVQKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_022971392.1 (uncharacterized protein LOC111470129 [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VL ECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLHECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_023539514.1 (uncharacterized protein LOC111800156 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 3.1e-95
Identity = 172/176 (97.73%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRS+GKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSSGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCW+LNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWILNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNK+ACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKEACS 176

[Close]

BLAST of Carg01173 vs. ExPASy TrEMBL
Match: A0A6J1G4Q1 (uncharacterized protein LOC111450501 OS=Cucurbita moschata OX=3662 GN=LOC111450501 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.0e-96
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCW+LNVLFAKKLFKGTV+KESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWILNVLFAKKLFKGTVQKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. ExPASy TrEMBL
Match: A0A6J1I1U0 (uncharacterized protein LOC111470129 OS=Cucurbita maxima OX=3661 GN=LOC111470129 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.7e-96
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VL ECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLHECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. ExPASy TrEMBL
Match: A0A1S3BKL9 (uncharacterized protein LOC103490645 OS=Cucumis melo OX=3656 GN=LOC103490645 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 146/180 (81.11%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSI+D RYGYFSD KW SEAV +HHVVVLRN +  KGFLF + AALAFCFF+LKGQS
Sbjct: 1   MAKFSISDRRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAALAFCFFLLKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF  LWC VLNV F KKLFKG+VEKESVMVMPNFGVQLETH+ SGKV+ RFVPVDKILKP
Sbjct: 61  IFVALWCLVLNVFFFKKLFKGSVEKESVMVMPNFGVQLETHFRSGKVLRRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 177
           VLLEC+TPVTCYWSLSLI+QGED+LLLVFKELRPPVKMLVPIWKALC      KN DACS
Sbjct: 121 VLLECLTPVTCYWSLSLIVQGEDELLLVFKELRPPVKMLVPIWKALCTATGDDKNGDACS 180

[Close]

BLAST of Carg01173 vs. ExPASy TrEMBL
Match: A0A6J1DVP3 (uncharacterized protein LOC111024811 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024811 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 143/180 (79.44%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSIT+WRYGYF DSK  SEAVDIHHVVV R++  GKGFL  I AALAFCFF+LK QS
Sbjct: 1   MAKFSITNWRYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF V WC VLNV FAKKLF+G VEKESV VMPNFGVQLETHY SGKVI +FVPVDK+LK 
Sbjct: 61  IFVVFWCLVLNVFFAKKLFRGMVEKESVTVMPNFGVQLETHYRSGKVIRQFVPVDKLLKS 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA----GKNKDACS 177
           VLLECVTPVTCYW LSLIIQGEDKLLLVFKELRPP+KM VPIWKAL A      N+DACS
Sbjct: 121 VLLECVTPVTCYWILSLIIQGEDKLLLVFKELRPPLKMXVPIWKALSAATGNNNNRDACS 180

[Close]

BLAST of Carg01173 vs. ExPASy TrEMBL
Match: A0A5A7UB03 (Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00170 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.1e-73
Identity = 139/172 (80.81%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 9   WRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQSIFAVLWCW 68
           +RYGYFSD KW SEAV +HHVVVLRN +  KGFLF + AALAFCFF+LKGQSIF  LWC 
Sbjct: 53  FRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAALAFCFFLLKGQSIFVALWCL 112

Query: 69  VLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKPVLLECVTP 128
           VLNV F KKLFKG+VEKESVMVMPNFGVQLETH+ SGKV+ RFVPVDKILKPVLLEC+TP
Sbjct: 113 VLNVFFFKKLFKGSVEKESVMVMPNFGVQLETHFRSGKVLRRFVPVDKILKPVLLECLTP 172

Query: 129 VTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 177
           VTCYWSLSLI+QGED+LLLVFKELRPPVKMLVPIWKALC      KN DACS
Sbjct: 173 VTCYWSLSLIVQGEDELLLVFKELRPPVKMLVPIWKALCTATGDDKNGDACS 224

[Close]

BLAST of Carg01173 vs. TAIR 10
Match: AT4G35530.1 (phosphatidylinositolglycan-related )

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-43
Identity = 90/182 (49.45%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 1   MAKFSITDWRYGYF--SDSKWQSEAVDIHHVVVLRNRSNGKGF-------LFYILAALAF 60
           M   S+++ RY Y   S SK   EA+DIHHV++  N S+G G+        F +  A + 
Sbjct: 1   MVSLSVSNKRYTYIHESGSKSTREAIDIHHVII--NGSSGTGYARRWGLGFFLVFLASSM 60

Query: 61  CFFILKGQSIFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRF 120
            F + K      + W  +L+        +  V+KESV+++P FG+QLET Y SGK + RF
Sbjct: 61  YFLLGKDNPARTLSWGCLLSGFLVMLHSRKFVKKESVIILPTFGIQLETQYLSGKTVSRF 120

Query: 121 VPVDKILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKN 174
           +P+DKILKPVL+ECVTP+TCYWSLSL ++GE++L LVFKELRPP+KMLVPIWKALCA   
Sbjct: 121 IPIDKILKPVLVECVTPITCYWSLSLFLRGEEQLTLVFKELRPPLKMLVPIWKALCAAIG 180

The following BLAST results are available for this feature:

BLAST of Carg01173 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027831.1	7.3e-97	100.00	hypothetical protein SDJN02_09008, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6596280.1	2.8e-96	99.43	hypothetical protein SDJN03_09460, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022946831.1	6.2e-96	98.30	uncharacterized protein LOC111450501 [Cucurbita moschata]	[more]
XP_022971392.1	1.4e-95	98.86	uncharacterized protein LOC111470129 [Cucurbita maxima]	[more]
XP_023539514.1	3.1e-95	97.73	uncharacterized protein LOC111800156 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg01173 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg01173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4Q1	3.0e-96	98.30	uncharacterized protein LOC111450501 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]
A0A6J1I1U0	6.7e-96	98.86	uncharacterized protein LOC111470129 OS=Cucurbita maxima OX=3661 GN=LOC111470129...	[more]
A0A1S3BKL9	1.2e-76	81.11	uncharacterized protein LOC103490645 OS=Cucumis melo OX=3656 GN=LOC103490645 PE=...	[more]
A0A6J1DVP3	2.7e-73	79.44	uncharacterized protein LOC111024811 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7UB03	6.1e-73	80.81	Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Cucumis melo v...	[more]

BLAST of Carg01173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35530.1	1.0e-43	49.45	phosphatidylinositolglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019328	GPI-GlcNAc transferase complex, PIG-H component, conserved domain	PFAM	PF10181	PIG-H	coord: 87..150 e-value: 1.9E-13 score: 50.0
IPR044215	Phosphatidylinositol N-acetylglucosaminyltransferase subunit H	PANTHER	PTHR15231	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H	coord: 5..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01173-RA	Carg01173-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006506	GPI anchor biosynthetic process
cellular_component	GO:0000506	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity