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Carg01049 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCAATAGCGAGAAGTTCTAGTTTGATTTCGAAAACAAGTTTCATTATCTCGTTGTTCTTTGTTCTTCATCGTCGAAAATGTCGTGCTGTGGTGGAAACTGTGGATGCGGCTCTGCCTGCAAGTGCGGAAACGGCTGCGGAGGGTGAGTAATCGCTAATTTTCTTCTTTAGATTTTGATTCTGTGGACTGATTTCTCAATTTCCTTCTGTGGAGAATGATTTCTAGAGATTTTGACCTTCCGTTTTATTGTTATTTTTTTCGATTTCCTTTTCGACTCTGTACCTTAGTTCCTCGATCGACTGCGATCTGATCATGCGTTGATTCTGTCTATTGAATTCTGAATATGAGAAAACATCACGCGATCACTGCCTATAATATTCTGAATTATCTGAGAAGGACTCCGATAATAGTTTTCTAGAGGATAATTACGATGATTCTGACGTTTCGTTTTGATATTTCGTTATGCAGTTGCAAGATGTTCCCTGACGTGAGCTTCTCTGAGACAACCGCAACCATCGAGACCTTCGTCGTCGGCCTCGCTCCTCAAAAGATGTAAGTTTGTTTGAATGAGCCTAATTTTTCAAGAGAAATTCGGTCATGAGTCATAATTTTAATTAACTGTACTTATTTTCCATATTAGGTCCTTCGAGGTTGCAGAGATGGGAGCCGAGAACGGCTGCAAATGCGGTGACAACTGCACCTGCGATCCATGCAACTGTAAATGAGCAATAGCTCAAATCCTTGCGACCTGAGATGTCTTCGAGTACTTAAGTATGATCATAATAACAATTATCAAATCTTCCAGTGTTTTCCTTCCGTCGTTGCGTCTTTAAGAGTCGATTGAAGTGTTCCTTTCAAATAATAGCAGTCGTTAAGTTGTGGAAAAACTGATATGCTGTTATGGCGCACGGATCTTGTTATCCAAAGATGCCTGTGTTTATCCATGTCTGTTTAGCGTTTGCTTTTCTCTGTGTAAAGAAGCGGTATGTGCTAATTTATGTGTAACAGAGTTTGTTCTTGATATCCGTATCTATTGTTGAAAATCCAGAACCGAGTTTGAACGCTCT GTTCAATAGCGAGAAGTTCTAGTTTGATTTCGAAAACAAGTTTCATTATCTCGTTGTTCTTTGTTCTTCATCGTCGAAAATGTCGTGCTGTGGTGGAAACTGTGGATGCGGCTCTGCCTGCAAGTGCGGAAACGGCTGCGGAGGTTGCAAGATGTTCCCTGACGTGAGCTTCTCTGAGACAACCGCAACCATCGAGACCTTCGTCGTCGGCCTCGCTCCTCAAAAGATGTCCTTCGAGGTTGCAGAGATGGGAGCCGAGAACGGCTGCAAATGCGGTGACAACTGCACCTGCGATCCATGCAACTGTAAATGAGCAATAGCTCAAATCCTTGCGACCTGAGATGTCTTCGAGTACTTAAGTATGATCATAATAACAATTATCAAATCTTCCAGTGTTTTCCTTCCGTCGTTGCGTCTTTAAGAGTCGATTGAAGTGTTCCTTTCAAATAATAGCAGTCGTTAAGTTGTGGAAAAACTGATATGCTGTTATGGCGCACGGATCTTGTTATCCAAAGATGCCTGTGTTTATCCATGTCTGTTTAGCGTTTGCTTTTCTCTGTGTAAAGAAGCGGTATGTGCTAATTTATGTGTAACAGAGTTTGTTCTTGATATCCGTATCTATTGTTGAAAATCCAGAACCGAGTTTGAACGCTCT ATGTCGTGCTGTGGTGGAAACTGTGGATGCGGCTCTGCCTGCAAGTGCGGAAACGGCTGCGGAGGTTGCAAGATGTTCCCTGACGTGAGCTTCTCTGAGACAACCGCAACCATCGAGACCTTCGTCGTCGGCCTCGCTCCTCAAAAGATGTCCTTCGAGGTTGCAGAGATGGGAGCCGAGAACGGCTGCAAATGCGGTGACAACTGCACCTGCGATCCATGCAACTGTAAATGA MSCCGGNCGCGSACKCGNGCGGCKMFPDVSFSETTATIETFVVGLAPQKMSFEVAEMGAENGCKCGDNCTCDPCNCK Homology
BLAST of Carg01049 vs. NCBI nr
Match: KAG6596409.1 (Metallothionein-like protein type 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027952.1 Metallothionein-like protein type 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 168.3 bits (425), Expect = 2.6e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Carg01049 vs. NCBI nr
Match: XP_022949247.1 (metallothionein-like protein type 2 [Cucurbita moschata] >XP_022971579.1 metallothionein-like protein type 2 [Cucurbita maxima] >XP_023538679.1 metallothionein-like protein type 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 167.2 bits (422), Expect = 5.7e-38 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Carg01049 vs. NCBI nr
Match: XP_022934858.1 (metallothionein-like protein type 2 B [Cucurbita moschata] >XP_023529118.1 metallothionein-like protein type 2 B [Cucurbita pepo subsp. pepo] >KAG6580545.1 Metallothionein-like protein type 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017297.1 Metallothionein-like protein type 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164.5 bits (415), Expect = 3.7e-37 Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Carg01049 vs. NCBI nr
Match: XP_022983596.1 (metallothionein-like protein type 2 B [Cucurbita maxima]) HSP 1 Score: 162.2 bits (409), Expect = 1.8e-36 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Carg01049 vs. NCBI nr
Match: XP_038906044.1 (metallothionein-like protein type 2 [Benincasa hispida]) HSP 1 Score: 162.2 bits (409), Expect = 1.8e-36 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy Swiss-Prot
Match: Q40158 (Metallothionein-like protein type 2 B OS=Solanum lycopersicum OX=4081 GN=MTB PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.6e-27 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy Swiss-Prot
Match: P30564 (Metallothionein-like protein type 2 OS=Ricinus communis OX=3988 GN=MTI PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.6e-27 Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy Swiss-Prot
Match: P43398 (Metallothionein-like protein 2 OS=Trifolium repens OX=3899 GN=MT1A PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 2.3e-26 Identity = 57/78 (73.08%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy Swiss-Prot
Match: P43390 (Metallothionein-like protein type 2 OS=Actinidia deliciosa OX=3627 GN=pKIWI504 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.1e-26 Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy Swiss-Prot
Match: Q41657 (Metallothionein-like protein type 2 OS=Vicia faba OX=3906 GN=MTI PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 5.2e-26 Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy TrEMBL
Match: A0A6J1I8Z4 (metallothionein-like protein type 2 OS=Cucurbita maxima OX=3661 GN=LOC111470252 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.8e-38 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy TrEMBL
Match: A0A6J1GBI9 (metallothionein-like protein type 2 OS=Cucurbita moschata OX=3662 GN=LOC111452655 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.8e-38 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy TrEMBL
Match: A0A6J1F8X2 (metallothionein-like protein type 2 B OS=Cucurbita moschata OX=3662 GN=LOC111441898 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37 Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy TrEMBL
Match: A0A6J1J2S1 (metallothionein-like protein type 2 B OS=Cucurbita maxima OX=3661 GN=LOC111482153 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 8.9e-37 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Carg01049 vs. ExPASy TrEMBL
Match: A0A1S3B6L7 (metallothionein-like protein type 2 OS=Cucumis melo OX=3656 GN=LOC103486389 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36 Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of Carg01049 vs. TAIR 10
Match: AT3G09390.1 (metallothionein 2A ) HSP 1 Score: 109.8 bits (273), Expect = 1.0e-24 Identity = 53/81 (65.43%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Carg01049 vs. TAIR 10
Match: AT5G02380.1 (metallothionein 2B ) HSP 1 Score: 92.0 bits (227), Expect = 2.2e-19 Identity = 47/81 (58.02%), Postives = 56/81 (69.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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