Carg00997 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00997
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr06: 1715051 .. 1718682 (+)
RNA-Seq Expression	Carg00997
Synteny	Carg00997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAGTGGTTTAATATACCTGAGAAGTGTGTTGGACAGAGGAAGTTCGACCCCATCTCTGCGGGTCCCAAAGAATGGAACTATTGAAGGCAAATGTGGAGAGATGAATATGGGTTTACTAAATTTCTTAACATTTAGACTAAATTTACTAAATTTCAGTGGAGAGTACAAGTCTTAATAGATTTAAGCTGGTTTGGCTAAGTTTAAATTGACATAATACGCAACTAAATGATACATTTTCGTAATTTAAGTAAAATTTCGGGAAATTTATTAACATTGATCTCTCCCTATAATAATACCGAAGATTATGGAACTACCCACAAGGGCCATACCAGAGATCAAAAGCACCATGCCCTTCTGTTAGAATCAAAAAGAGCCGAAAATGAACAAGCTCAGACCTTTAATGGAGTTTTCCTCTTCTGCAGAGTTTTGATTCCTTCACTCTTTATTCAGCTGATTTCCAGTTCGAAACCGCAAAGATTTAGAAACTTTCCCACCCAAGATACCGTTCTTTCATTTGCTGGGGATACCCATTTCTTCTTCTACGGGACTTGTCCTTCGATAATGGTTTTGTCTCTAAATTCTAATTTATTGGACCTTGTTTTCGCATTCTGATACCGATATCGGCGATGAACTTGTCCATCTGTTCGTTTATGCGTCTTGAAGTCTTTTTCTTTCATCATTCCACTGTGGGATAGAAACTCCAAACGTATCTTCTTCAGGTAGGCTTTTTGGATTCTGAATATTGTTTTCGGTATTGTGCTAAAAAGAAATTTTATAATGTATGAATATTTGTGATGATTCTGTACTTTTATGGATGTTGAATTGTTGTACGCTAGGTGCTCGAAGAATGTCCGCTGAGAGATATTGCTAGCATATTTCGACGTGAACAGTGACACTGTAAAATAGTTGGGCGTGGAACTGGAGCTGTACGCGTTTGAGGTACAAGGTGTTTTCTAATGTGAAACTAGAATGTAGAAATTTGAATGGAAGTTCTGGTTTCACTTGATAGATTTGAATGTCTGGCCTTGGCACTGCCGCCTCATTTGTTCAATTTCTTGCACCCCATGGTTTCTGGCGGTGTCCTATGCAATCAGACTCCAATTCGTACCAGAGATAGTAGTGGAAATCTAACACGATTGAAATCTCCATGTGGAAGTTGATTCTTGCAGTTGCAGGGGATGGATAGGTTGAAACCTCGTGTGCTGTTTTCTGCAGTTTCTTTAAGAATGGCATTAGAATAGATTAAGAGAATGGCATTTTTAAGAGCCTTAAATTCTATATATTTTGAAACCTTCTCTTCAGAAGCTATTATTTTCTTCAACCCTTGTTGTTCAGCTACCTCATTAAAGAACTTCAAACCTCGACTGCAATTAGCATTCTCTCATACACGACCCAACACCCAGCTTGCCTTTTCTCCCTCCCCTGTTTCTGAACAATCTTATGATGATTATATAATTTCTCTCTGCAAAAAAGGTTTAAACAGAGAGGCTCTTCAAGCATTTGAAACCTTTCAGAACTGTTCAAATTCCCCATTGAATTCTATAACTTATACCCATTTGATCAACACTTGCTCTTCTCTAAGATTCCTAGAACATGGCAGGAAAATTCATCGTCATATGATGACATTTAACTACCAGCCTGATATGATACTTCAGAATCATATTCTTAATATGTACGGGAAGTGCGGGTCTTTGAAGGAAGCTAGAAATGTTTTTGATGCAATGCCCCTGAAGAACGTGGTATCTTGGACCTCCATGATATCGGGGTACTCGCATTATGGACAAGAAGATAATGCCATTACATTGTATGTTCAAATGTTCAGATCAGGATGTACTCCTGATCACTTTACCTTGGGAAGTGTACTAAAATCTTGCTCAGGACTTGATGATTCTATGTTAGCGAGACAACTACATGCCCATGTTCTGAAGTCTGAATTTGGTGGCCACCTAATCGCACAGAATGCTCTAATCTCAATGTATACCAAGTACAATCAAATTGCTGATGCAATAAATGTCTTCTCTCATATTATTACAAAGGATCTAATTTCCTGGAGCTCAATGATTGCAGGGTTTTCCCGGTTTGGTTATGAGCTCGAAGCTTTATTTCTTTTCAGGGAAATGCTTTCTCAGCCTGTCTACCAGCCAAATGAGTTCATCTTTGGTAGTGCCTTTAGTGCTTGTACCAAGCTCTTAGAACCAAATTATGGACGCCAAATACATGGCTTGTGTATAAAATTTGGATTAGGAAGCGATGCTTTTGCCGGATGCTCCCTCTGTGACATGTATGCAAAGTGTAGATTTCTAAGATCTGCAAGAACTGTGTTTAATCAGATTGAAAAGCCTGATTTAGTAGCCTGGAATGCTATTATTGCAGGATTTGCCAGTGTTGGTGATGTAAAGGAATCCATGTCTTTATTTTCTCAGATGAGGATAACAGGGCTTGCTCCAAATGATGTCACAGTCCTCTCTTTACTTTGTGCTTGTTCAGAGCCTGTGATGCTTTATCAGGGAATGCAGGTTCATTCCTACATTGTCCAGATGGGTTTTGATTCAGGTTCATTCCAGTTTACTTAGCATGTATTCAAAATGTTCAAATTTGAATGATGCACTTCAAATATTTGAAGATATAGGAAATAAAGCGGATATAGTTTCTTGGAACACCATGCTTATGGCATGCCTCCATCACAACCAAGCTGGTGAGGTTTTAAGATTAACGAAGACAATGCTTGTTTCTCACATTAAGCCTGACCATGTTACTTTGACGAATGTATTGGTGTCATCTGGACAAATAGCATCTTATGAAGTGGGAAGTCAAGTTCATTGCTTAATCATGAAATCAGGGCTGAATCTTGATACTTCTGTTTCAAATGCGTTAATCAACATGTATATGAAGTGTGGATCTCTTGGAAGTGCTCAAAAAATGTTCGACTCAATTGACAATCCGGATATCATTTCATGGAGTAGCTTGATTGTTGGATATGCTCAGGCTGGATGTGGTGAAGAAGCTTTCAAACTTTACAGAACCATGAGAGGCCTTGGTGTAAAGCCTAATGAAATTACATTTGTTGGTATCCTTACTGCCTGCAGTCATATTGGAATGGTGGAAGAAGGTTTGAAGTTATACAGGGCAATGCAAGAGGAAGATGGCATTGCACCAACTAGAGAACACTGTTCGTGTATGGTTGACTTGCTTGCCCGTGCTGGATGCTTGGATGGAGCAGAGGATTTTATCAACCAAATGCCTTTCGATCCCGACATTGTCGTCTGGAAGACTCTGCTAGCAGCATGTAAAGTCCATGGCAATCTCGAGGTTGGCAAAAGAGCTGCAGAGAAGGTATTGAAAACCGATCCATACAACTCTGCGGCACTTGTGATGCTTTGTAATATACATGCTTCTTCGGGCCATTGGAACGATCTTGCTCAATTGAGGAGCTCGATGAGACAGATGGATGTCAGCAAAGTTCCAGGTCAGAGCTGGATTGAGATCAAGGATAGAGTTCATGTGTTTCTTGCTGAAGATAGCTTGCATCCTGAGAGAAGTAGAATATACAGAATGCTAGAGGAGTTGATGTTGCAAATTTTAGATGATAGCTGTGATCCAATACAGATGGAGTCTTTTGATTAG

mRNA sequence

ATGGGGAAGAGTGGTTTAATATACCTGAGAAGTGTGTTGGACAGAGGAAGTTCGACCCCATCTCTGCGGGTCCCAAAGAATGGAACTATTGAAGGCAAATGTGGAGAGATGAATATGGCTACCTCATTAAAGAACTTCAAACCTCGACTGCAATTAGCATTCTCTCATACACGACCCAACACCCAGCTTGCCTTTTCTCCCTCCCCTGTTTCTGAACAATCTTATGATGATTATATAATTTCTCTCTGCAAAAAAGGTTTAAACAGAGAGGCTCTTCAAGCATTTGAAACCTTTCAGAACTGTTCAAATTCCCCATTGAATTCTATAACTTATACCCATTTGATCAACACTTGCTCTTCTCTAAGATTCCTAGAACATGGCAGGAAAATTCATCGTCATATGATGACATTTAACTACCAGCCTGATATGATACTTCAGAATCATATTCTTAATATGTACGGGAAGTGCGGGTCTTTGAAGGAAGCTAGAAATGTTTTTGATGCAATGCCCCTGAAGAACGTGGTATCTTGGACCTCCATGATATCGGGGTACTCGCATTATGGACAAGAAGATAATGCCATTACATTGTATGTTCAAATGTTCAGATCAGGATGTACTCCTGATCACTTTACCTTGGGAAGTGTACTAAAATCTTGCTCAGGACTTGATGATTCTATGTTAGCGAGACAACTACATGCCCATGTTCTGAAGTCTGAATTTGGTGGCCACCTAATCGCACAGAATGCTCTAATCTCAATGTATACCAAGTACAATCAAATTGCTGATGCAATAAATGTCTTCTCTCATATTATTACAAAGGATCTAATTTCCTGGAGCTCAATGATTGCAGGGTTTTCCCGGTTTGGTTATGAGCTCGAAGCTTTATTTCTTTTCAGGGAAATGCTTTCTCAGCCTGTCTACCAGCCAAATGAGTTCATCTTTGGTAGTGCCTTTAGTGCTTGTACCAAGCTCTTAGAACCAAATTATGGACGCCAAATACATGGCTTGTGTATAAAATTTGGATTAGGAAGCGATGCTTTTGCCGGATGCTCCCTCTGTGACATGTATGCAAAGTGTAGATTTCTAAGATCTGCAAGAACTGTGTTTAATCAGATTGAAAAGCCTGATTTAGTAGCCTGGAATGCTATTATTGCAGGATTTGCCAGTGTTGGTGATGTAAAGGAATCCATGTCTTTATTTTCTCAGATGAGGATAACAGGGCTTGCTCCAAATGATGTCACAGTCCTCTCTTTACTTTGTGCTTGTTCAGAGCCTGTGATGCTTTATCAGGGAATGCAGGTTCATTCCAGTTTACTTAGCATGTATTCAAAATGTTCAAATTTGAATGATGCACTTCAAATATTTGAAGATATAGGAAATAAAGCGGATATAGTTTCTTGGAACACCATGCTTATGGCATGCCTCCATCACAACCAAGCTGGTGAGGTTTTAAGATTAACGAAGACAATGCTTGTTTCTCACATTAAGCCTGACCATGTTACTTTGACGAATGTATTGGTGTCATCTGGACAAATAGCATCTTATGAAGTGGGAAGTCAAGTTCATTGCTTAATCATGAAATCAGGGCTGAATCTTGATACTTCTGTTTCAAATGCGTTAATCAACATGTATATGAAGTGTGGATCTCTTGGAAGTGCTCAAAAAATGTTCGACTCAATTGACAATCCGGATATCATTTCATGGAGTAGCTTGATTGTTGGATATGCTCAGGCTGGATGTGGTGAAGAAGCTTTCAAACTTTACAGAACCATGAGAGGCCTTGGTGTAAAGCCTAATGAAATTACATTTGTTGGTATCCTTACTGCCTGCAGTCATATTGGAATGGTGGAAGAAGGTTTGAAGTTATACAGGGCAATGCAAGAGGAAGATGGCATTGCACCAACTAGAGAACACTGTTCGTGTATGGTTGACTTGCTTGCCCGTGCTGGATGCTTGGATGGAGCAGAGGATTTTATCAACCAAATGCCTTTCGATCCCGACATTGTCGTCTGGAAGACTCTGCTAGCAGCATGTAAAGTCCATGGCAATCTCGAGGTTGGCAAAAGAGCTGCAGAGAAGGTATTGAAAACCGATCCATACAACTCTGCGGCACTTGTGATGCTTTGTAATATACATGCTTCTTCGGGCCATTGGAACGATCTTGCTCAATTGAGGAGCTCGATGAGACAGATGGATGTCAGCAAAGTTCCAGGTCAGAGCTGGATTGAGATCAAGGATAGAGTTCATGTGTTTCTTGCTGAAGATAGCTTGCATCCTGAGAGAAGTAGAATATACAGAATGCTAGAGGAGTTGATGTTGCAAATTTTAGATGATAGCTGTGATCCAATACAGATGGAGTCTTTTGATTAG

Coding sequence (CDS)

ATGGGGAAGAGTGGTTTAATATACCTGAGAAGTGTGTTGGACAGAGGAAGTTCGACCCCATCTCTGCGGGTCCCAAAGAATGGAACTATTGAAGGCAAATGTGGAGAGATGAATATGGCTACCTCATTAAAGAACTTCAAACCTCGACTGCAATTAGCATTCTCTCATACACGACCCAACACCCAGCTTGCCTTTTCTCCCTCCCCTGTTTCTGAACAATCTTATGATGATTATATAATTTCTCTCTGCAAAAAAGGTTTAAACAGAGAGGCTCTTCAAGCATTTGAAACCTTTCAGAACTGTTCAAATTCCCCATTGAATTCTATAACTTATACCCATTTGATCAACACTTGCTCTTCTCTAAGATTCCTAGAACATGGCAGGAAAATTCATCGTCATATGATGACATTTAACTACCAGCCTGATATGATACTTCAGAATCATATTCTTAATATGTACGGGAAGTGCGGGTCTTTGAAGGAAGCTAGAAATGTTTTTGATGCAATGCCCCTGAAGAACGTGGTATCTTGGACCTCCATGATATCGGGGTACTCGCATTATGGACAAGAAGATAATGCCATTACATTGTATGTTCAAATGTTCAGATCAGGATGTACTCCTGATCACTTTACCTTGGGAAGTGTACTAAAATCTTGCTCAGGACTTGATGATTCTATGTTAGCGAGACAACTACATGCCCATGTTCTGAAGTCTGAATTTGGTGGCCACCTAATCGCACAGAATGCTCTAATCTCAATGTATACCAAGTACAATCAAATTGCTGATGCAATAAATGTCTTCTCTCATATTATTACAAAGGATCTAATTTCCTGGAGCTCAATGATTGCAGGGTTTTCCCGGTTTGGTTATGAGCTCGAAGCTTTATTTCTTTTCAGGGAAATGCTTTCTCAGCCTGTCTACCAGCCAAATGAGTTCATCTTTGGTAGTGCCTTTAGTGCTTGTACCAAGCTCTTAGAACCAAATTATGGACGCCAAATACATGGCTTGTGTATAAAATTTGGATTAGGAAGCGATGCTTTTGCCGGATGCTCCCTCTGTGACATGTATGCAAAGTGTAGATTTCTAAGATCTGCAAGAACTGTGTTTAATCAGATTGAAAAGCCTGATTTAGTAGCCTGGAATGCTATTATTGCAGGATTTGCCAGTGTTGGTGATGTAAAGGAATCCATGTCTTTATTTTCTCAGATGAGGATAACAGGGCTTGCTCCAAATGATGTCACAGTCCTCTCTTTACTTTGTGCTTGTTCAGAGCCTGTGATGCTTTATCAGGGAATGCAGGTTCATTCCAGTTTACTTAGCATGTATTCAAAATGTTCAAATTTGAATGATGCACTTCAAATATTTGAAGATATAGGAAATAAAGCGGATATAGTTTCTTGGAACACCATGCTTATGGCATGCCTCCATCACAACCAAGCTGGTGAGGTTTTAAGATTAACGAAGACAATGCTTGTTTCTCACATTAAGCCTGACCATGTTACTTTGACGAATGTATTGGTGTCATCTGGACAAATAGCATCTTATGAAGTGGGAAGTCAAGTTCATTGCTTAATCATGAAATCAGGGCTGAATCTTGATACTTCTGTTTCAAATGCGTTAATCAACATGTATATGAAGTGTGGATCTCTTGGAAGTGCTCAAAAAATGTTCGACTCAATTGACAATCCGGATATCATTTCATGGAGTAGCTTGATTGTTGGATATGCTCAGGCTGGATGTGGTGAAGAAGCTTTCAAACTTTACAGAACCATGAGAGGCCTTGGTGTAAAGCCTAATGAAATTACATTTGTTGGTATCCTTACTGCCTGCAGTCATATTGGAATGGTGGAAGAAGGTTTGAAGTTATACAGGGCAATGCAAGAGGAAGATGGCATTGCACCAACTAGAGAACACTGTTCGTGTATGGTTGACTTGCTTGCCCGTGCTGGATGCTTGGATGGAGCAGAGGATTTTATCAACCAAATGCCTTTCGATCCCGACATTGTCGTCTGGAAGACTCTGCTAGCAGCATGTAAAGTCCATGGCAATCTCGAGGTTGGCAAAAGAGCTGCAGAGAAGGTATTGAAAACCGATCCATACAACTCTGCGGCACTTGTGATGCTTTGTAATATACATGCTTCTTCGGGCCATTGGAACGATCTTGCTCAATTGAGGAGCTCGATGAGACAGATGGATGTCAGCAAAGTTCCAGGTCAGAGCTGGATTGAGATCAAGGATAGAGTTCATGTGTTTCTTGCTGAAGATAGCTTGCATCCTGAGAGAAGTAGAATATACAGAATGCTAGAGGAGTTGATGTTGCAAATTTTAGATGATAGCTGTGATCCAATACAGATGGAGTCTTTTGATTAG

Protein sequence

MGKSGLIYLRSVLDRGSSTPSLRVPKNGTIEGKCGEMNMATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHSSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMESFD

Homology

[Close]

BLAST of Carg00997 vs. NCBI nr
Match: KAG7028004.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1602.8 bits (4149), Expect = 0.0e+00
Identity = 789/789 (100.00%), Postives = 789/789 (100.00%), Query Frame = 0


Query: 1   MGKSGLIYLRSVLDRGSSTPSLRVPKNGTIEGKCGEMNMATSLKNFKPRLQLAFSHTRPN 60
           MGKSGLIYLRSVLDRGSSTPSLRVPKNGTIEGKCGEMNMATSLKNFKPRLQLAFSHTRPN
Sbjct: 1   MGKSGLIYLRSVLDRGSSTPSLRVPKNGTIEGKCGEMNMATSLKNFKPRLQLAFSHTRPN 60

Query: 61  TQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSS 120
           TQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSS
Sbjct: 61  TQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSS 120

Query: 121 LRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSM 180
           LRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSM
Sbjct: 121 LRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSM 180

Query: 181 ISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEF 240
           ISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEF
Sbjct: 181 ISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEF 240

Query: 241 GGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFRE 300
           GGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFRE
Sbjct: 241 GGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFRE 300

Query: 301 MLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCR 360
           MLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCR
Sbjct: 301 MLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCR 360

Query: 361 FLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLC 420
           FLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLC
Sbjct: 361 FLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLC 420

Query: 421 ACSEPVMLYQGMQVHSSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQA 480
           ACSEPVMLYQGMQVHSSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQA
Sbjct: 421 ACSEPVMLYQGMQVHSSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQA 480

Query: 481 GEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNAL 540
           GEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNAL
Sbjct: 481 GEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNAL 540

Query: 541 INMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNE 600
           INMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNE
Sbjct: 541 INMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNE 600

Query: 601 ITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFIN 660
           ITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFIN
Sbjct: 601 ITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFIN 660

Query: 661 QMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWND 720
           QMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWND
Sbjct: 661 QMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWND 720

Query: 721 LAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSC 780
           LAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSC
Sbjct: 721 LAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSC 780

Query: 781 DPIQMESFD 790
           DPIQMESFD
Sbjct: 781 DPIQMESFD 789

[Close]

BLAST of Carg00997 vs. NCBI nr
Match: XP_022947264.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1481.1 bits (3833), Expect = 0.0e+00
Identity = 734/765 (95.95%), Postives = 738/765 (96.47%), Query Frame = 0


Query: 40  ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQ 99
           ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKK LNREALQAFETFQ
Sbjct: 29  ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKWLNREALQAFETFQ 88

Query: 100 NCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSL 159
            CSNSPLNSITYTHLINTC SLRFLEHGRKIHRHM TFNYQPDMILQNHILNMYGKCGSL
Sbjct: 89  KCSNSPLNSITYTHLINTCCSLRFLEHGRKIHRHMTTFNYQPDMILQNHILNMYGKCGSL 148

Query: 160 KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSC 219
           KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFT GSVLKSC
Sbjct: 149 KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTFGSVLKSC 208

Query: 220 SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 279
           SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS
Sbjct: 209 SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 268

Query: 280 SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 339
           SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK
Sbjct: 269 SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 328

Query: 340 FGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL 399
           FGLGSDAFAGCSLCDMYAKC FLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKES SL
Sbjct: 329 FGLGSDAFAGCSLCDMYAKCGFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESTSL 388

Query: 400 FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS---------------SLLSMYSK 459
           FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS               SLLSMYSK
Sbjct: 389 FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHSYIVQMGFDSEIPVCNSLLSMYSK 448

Query: 460 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN 519
           CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN
Sbjct: 449 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN 508

Query: 520 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPD 579
           VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSA+K+FDSI+NPD
Sbjct: 509 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSARKIFDSIENPD 568

Query: 580 IISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 639
           IISWSSLIVGYAQAGCGEEAFKL+RTMRGLGVKPNEITFVG LTACSHIGMVEEGLKLYR
Sbjct: 569 IISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITFVGFLTACSHIGMVEEGLKLYR 628

Query: 640 AMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL 699
            MQEEDGIAPTREHCSCMVDLLARAGCLD AEDFINQMPFDPDIVVWKTLLAACKVHGNL
Sbjct: 629 TMQEEDGIAPTREHCSCMVDLLARAGCLDEAEDFINQMPFDPDIVVWKTLLAACKVHGNL 688

Query: 700 EVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI 759
           EVGKRAAEKVLKTDP NSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI
Sbjct: 689 EVGKRAAEKVLKTDPSNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI 748

Query: 760 KDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMESFD 790
           KDRVHVFLAEDSLHPER RIYRMLEELMLQILDDSCDPIQMESFD
Sbjct: 749 KDRVHVFLAEDSLHPERGRIYRMLEELMLQILDDSCDPIQMESFD 793

[Close]

BLAST of Carg00997 vs. NCBI nr
Match: XP_023005822.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1459.1 bits (3776), Expect = 0.0e+00
Identity = 720/764 (94.24%), Postives = 735/764 (96.20%), Query Frame = 0


Query: 40  ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQ 99
           ATSLKNFKPRLQLAFSHTRPNTQLAFSP+PV+EQSYDDYIISLCKKGLNREALQAFETFQ
Sbjct: 29  ATSLKNFKPRLQLAFSHTRPNTQLAFSPTPVTEQSYDDYIISLCKKGLNREALQAFETFQ 88

Query: 100 NCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSL 159
            CSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHM TFNYQPD++LQNHILNMYGKCGSL
Sbjct: 89  KCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMTTFNYQPDILLQNHILNMYGKCGSL 148

Query: 160 KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSC 219
           KEARNVFDAM LKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFT GSVLKSC
Sbjct: 149 KEARNVFDAMSLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTFGSVLKSC 208

Query: 220 SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 279
           SGL+DSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS
Sbjct: 209 SGLEDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 268

Query: 280 SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 339
           SMIAGFSRFGYELEALFLFREMLSQPVY PNEFIFGSAFSACTKLLEPNYGRQIHGLCIK
Sbjct: 269 SMIAGFSRFGYELEALFLFREMLSQPVYHPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 328

Query: 340 FGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL 399
           FGLGSDAFAGCSLCDMYAKC FLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL
Sbjct: 329 FGLGSDAFAGCSLCDMYAKCGFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL 388

Query: 400 FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS---------------SLLSMYSK 459
           FSQMRITGLA NDVTVLSLLCACS+PVMLYQGMQVHS               SLLSMYSK
Sbjct: 389 FSQMRITGLASNDVTVLSLLCACSDPVMLYQGMQVHSYIVQMGFDSEIPVCNSLLSMYSK 448

Query: 460 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN 519
           CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPD+VTLTN
Sbjct: 449 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDYVTLTN 508

Query: 520 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPD 579
           VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSV NALINMYMKCGS+GSA+K+FDSIDNPD
Sbjct: 509 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVLNALINMYMKCGSVGSARKIFDSIDNPD 568

Query: 580 IISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 639
           IISWSSLIVGYAQAGCGEEAFKL+RTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR
Sbjct: 569 IISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 628

Query: 640 AMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL 699
            MQEEDGIAPT+EHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL
Sbjct: 629 TMQEEDGIAPTKEHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL 688

Query: 700 EVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI 759
           EVGKRAAE VLK+DP NSAALVMLCN+HASSGHWNDLA+LRSSMRQMDVSKVPGQSWIEI
Sbjct: 689 EVGKRAAENVLKSDPSNSAALVMLCNMHASSGHWNDLARLRSSMRQMDVSKVPGQSWIEI 748

Query: 760 KDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMESF 789
           KDRVHVFLAEDSLHPER RIY MLEEL LQILDDSCDPIQMESF
Sbjct: 749 KDRVHVFLAEDSLHPERGRIYTMLEELRLQILDDSCDPIQMESF 792

[Close]

BLAST of Carg00997 vs. NCBI nr
Match: XP_022947273.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 643/671 (95.83%), Postives = 647/671 (96.42%), Query Frame = 0


Query: 134 MMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA 193
           M TFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA
Sbjct: 1   MTTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA 60

Query: 194 ITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM 253
           ITLYVQMFRSGCTPDHFT GSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM
Sbjct: 61  ITLYVQMFRSGCTPDHFTFGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM 120

Query: 254 YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI 313
           YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI
Sbjct: 121 YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI 180

Query: 314 FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIE 373
           FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKC FLRSARTVFNQIE
Sbjct: 181 FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCGFLRSARTVFNQIE 240

Query: 374 KPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQ 433
           KPDLVAWNAIIAGFASVGDVKES SLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQ
Sbjct: 241 KPDLVAWNAIIAGFASVGDVKESTSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQ 300

Query: 434 VHS---------------SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHN 493
           VHS               SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHN
Sbjct: 301 VHSYIVQMGFDSEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHN 360

Query: 494 QAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSN 553
           QAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSN
Sbjct: 361 QAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSN 420

Query: 554 ALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKP 613
           ALINMYMKCGSLGSA+K+FDSI+NPDIISWSSLIVGYAQAGCGEEAFKL+RTMRGLGVKP
Sbjct: 421 ALINMYMKCGSLGSARKIFDSIENPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKP 480

Query: 614 NEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDF 673
           NEITFVG LTACSHIGMVEEGLKLYR MQEEDGIAPTREHCSCMVDLLARAGCLD AEDF
Sbjct: 481 NEITFVGFLTACSHIGMVEEGLKLYRTMQEEDGIAPTREHCSCMVDLLARAGCLDEAEDF 540

Query: 674 INQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHW 733
           INQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDP NSAALVMLCNIHASSGHW
Sbjct: 541 INQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPSNSAALVMLCNIHASSGHW 600

Query: 734 NDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDD 790
           NDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPER RIYRMLEELMLQILDD
Sbjct: 601 NDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERGRIYRMLEELMLQILDD 660

[Close]

BLAST of Carg00997 vs. NCBI nr
Match: XP_022145760.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 1293.9 bits (3347), Expect = 0.0e+00
Identity = 638/765 (83.40%), Postives = 679/765 (88.76%), Query Frame = 0


Query: 38  NMATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFET 97
           ++A  +  FKPRLQ AFSH RPNTQ+AFSP P  EQSYDDYIISLCKK   REALQAF+ 
Sbjct: 27  SLANPINIFKPRLQFAFSHIRPNTQIAFSPCPAPEQSYDDYIISLCKKNFPREALQAFDI 86

Query: 98  FQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCG 157
           F+ C++ PL SITY+HLIN CS LR LEHGR+IH HM+ FNYQPD+ILQNHILNMYGKCG
Sbjct: 87  FRKCTSFPLKSITYSHLINACSYLRSLEHGRRIHGHMLAFNYQPDLILQNHILNMYGKCG 146

Query: 158 SLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLK 217
           SLKEARNVFDAMP +NVVSWTS+ISGYSHYGQEDNAITLYVQM +SG  PDHFT GSV+K
Sbjct: 147 SLKEARNVFDAMPQRNVVSWTSLISGYSHYGQEDNAITLYVQMLQSGYVPDHFTFGSVIK 206

Query: 218 SCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLIS 277
           SCSGLDD MLARQLHAHVLKSEFGGHLI+QNALISMYTK++QI+DAINVF+ I+ KDLIS
Sbjct: 207 SCSGLDDFMLARQLHAHVLKSEFGGHLISQNALISMYTKFSQISDAINVFTRIMAKDLIS 266

Query: 278 WSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLC 337
           W SMIAGFS+ GYELEAL  FREMLS  VYQPN+FIFGSAFSAC+KLLEPNYGRQIH LC
Sbjct: 267 WGSMIAGFSQLGYELEALHHFREMLSGHVYQPNQFIFGSAFSACSKLLEPNYGRQIHSLC 326

Query: 338 IKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESM 397
           +KFGLGSD FAGCSLCDMYAKC  L SARTVF QIEKPDLV+WNAIIAGFAS GD KESM
Sbjct: 327 MKFGLGSDLFAGCSLCDMYAKCGLLESARTVFYQIEKPDLVSWNAIIAGFASAGDAKESM 386

Query: 398 SLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS---------------SLLSMY 457
           SLFSQMR TGLA NDVTVLSLLCACSEPVML QGMQVHS                LL+MY
Sbjct: 387 SLFSQMRHTGLAANDVTVLSLLCACSEPVMLCQGMQVHSYIIKMGFYLEIHVCNCLLNMY 446

Query: 458 SKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTL 517
           SKCSNLNDAL +FEDI NKADIVSWNT+L ACL  NQAGEVLRLTK MLVS IKPDHVT+
Sbjct: 447 SKCSNLNDALGVFEDIENKADIVSWNTVLTACLQQNQAGEVLRLTKQMLVSSIKPDHVTV 506

Query: 518 TNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDN 577
           TNVLVSSGQ+ASYEVGSQVHC I+KSGLNLDTSVSNALINMY KCGSLGSAQKMFDSIDN
Sbjct: 507 TNVLVSSGQVASYEVGSQVHCFIIKSGLNLDTSVSNALINMYTKCGSLGSAQKMFDSIDN 566

Query: 578 PDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 637
           PDIISWSSLIVGYAQAG G++AFKL+RTMRGLGVKPNEITFV ILTACSHIGMVEEGLKL
Sbjct: 567 PDIISWSSLIVGYAQAGSGDKAFKLFRTMRGLGVKPNEITFVVILTACSHIGMVEEGLKL 626

Query: 638 YRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHG 697
           YR MQEEDGI+PTREHCSCMVDLLARAGCLDGAE+FI QMPFDPDIVVWKTLLAACK+HG
Sbjct: 627 YRTMQEEDGISPTREHCSCMVDLLARAGCLDGAEEFIKQMPFDPDIVVWKTLLAACKIHG 686

Query: 698 NLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWI 757
           NLE+G+RAAE VLK DP NSAALVMLCNIHASSGHW D A LRSSMRQMDVSKVPGQSWI
Sbjct: 687 NLEIGRRAAENVLKIDPSNSAALVMLCNIHASSGHWKDFALLRSSMRQMDVSKVPGQSWI 746

Query: 758 EIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMES 788
           EIKDRVHVFLAEDSLHPE  RIY MLEEL LQILDDSCDPIQM S
Sbjct: 747 EIKDRVHVFLAEDSLHPETGRIYTMLEELRLQILDDSCDPIQMVS 791

[Close]

BLAST of Carg00997 vs. ExPASy Swiss-Prot
Match: Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 2.9e-241
Identity = 410/742 (55.26%), Postives = 540/742 (72.78%), Query Frame = 0


Query: 60  NTQLAFSPSPVS----EQSYDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLI 119
           N+Q+  + S VS    E+  +D+I SLCK    REAL+AF+  Q  S+  +   TY  LI
Sbjct: 15  NSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLI 74

Query: 120 NTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVV 179
             CSS R L  GRKIH H++  N + D IL NHIL+MYGKCGSL++AR VFD MP +N+V
Sbjct: 75  CACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLV 134

Query: 180 SWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHV 239
           S+TS+I+GYS  GQ   AI LY++M +    PD F  GS++K+C+   D  L +QLHA V
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194

Query: 240 LKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEAL 299
           +K E   HLIAQNALI+MY ++NQ++DA  VF  I  KDLISWSS+IAGFS+ G+E EAL
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254

Query: 300 FLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDM 359
              +EMLS  V+ PNE+IFGS+  AC+ LL P+YG QIHGLCIK  L  +A AGCSLCDM
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314

Query: 360 YAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTV 419
           YA+C FL SAR VF+QIE+PD  +WN IIAG A+ G   E++S+FSQMR +G  P+ +++
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374

Query: 420 LSLLCACSEPVMLYQGMQVHS---------------SLLSMYSKCSNLNDALQIFEDIGN 479
            SLLCA ++P+ L QGMQ+HS               SLL+MY+ CS+L     +FED  N
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434

Query: 480 KADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQ 539
            AD VSWNT+L ACL H Q  E+LRL K MLVS  +PDH+T+ N+L    +I+S ++GSQ
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494

Query: 540 VHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGC 599
           VHC  +K+GL  +  + N LI+MY KCGSLG A+++FDS+DN D++SWS+LIVGYAQ+G 
Sbjct: 495 VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGF 554

Query: 600 GEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCS 659
           GEEA  L++ M+  G++PN +TFVG+LTACSH+G+VEEGLKLY  MQ E GI+PT+EHCS
Sbjct: 555 GEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS 614

Query: 660 CMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPY 719
           C+VDLLARAG L+ AE FI++M  +PD+VVWKTLL+ACK  GN+ + ++AAE +LK DP+
Sbjct: 615 CVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPF 674

Query: 720 NSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPE 779
           NS A V+LC++HASSG+W + A LRSSM++ DV K+PGQSWIEI+D++H+F AED  HPE
Sbjct: 675 NSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPE 734

Query: 780 RSRIYRMLEELMLQILDDSCDP 783
           R  IY +L  +  Q+LD+ C+P
Sbjct: 735 RDDIYTVLHNIWSQMLDE-CNP 755

[Close]

BLAST of Carg00997 vs. ExPASy Swiss-Prot
Match: Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 8.3e-127
Identity = 250/720 (34.72%), Postives = 406/720 (56.39%), Query Frame = 0


Query: 79  IISLCK-KGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGR----KIHRH 138
           ++S C   G+  E+L  F  F        N    +  I  CS L     GR    ++   
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSF 175

Query: 139 MMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA 198
           ++   +  D+ +   +++ Y K G++  AR VFDA+P K+ V+WT+MISG    G+   +
Sbjct: 176 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 235

Query: 199 ITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM 258
           + L+ Q+      PD + L +VL +CS L      +Q+HAH+L+          N LI  
Sbjct: 236 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 295

Query: 259 YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI 318
           Y K  ++  A  +F+ +  K++ISW+++++G+ +     EA+ LF  M S+   +P+ + 
Sbjct: 296 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYA 355

Query: 319 FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIE 378
             S  ++C  L    +G Q+H   IK  LG+D++   SL DMYAKC  L  AR VF+   
Sbjct: 356 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 415

Query: 379 KPDLVAWNAIIAGFASVG---DVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQ 438
             D+V +NA+I G++ +G   ++ E++++F  MR   + P+ +T +SLL A +    L  
Sbjct: 416 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 475

Query: 439 GMQVH---------------SSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACL 498
             Q+H               S+L+ +YS C  L D+  +F+++  K D+V WN+M    +
Sbjct: 476 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYV 535

Query: 499 HHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTS 558
             ++  E L L   + +S  +PD  T  N++ ++G +AS ++G + HC ++K GL  +  
Sbjct: 536 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 595

Query: 559 VSNALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLG 618
           ++NAL++MY KCGS   A K FDS  + D++ W+S+I  YA  G G++A ++   M   G
Sbjct: 596 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 655

Query: 619 VKPNEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGA 678
           ++PN ITFVG+L+ACSH G+VE+GLK +  M    GI P  EH  CMV LL RAG L+ A
Sbjct: 656 IEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKA 715

Query: 679 EDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASS 738
            + I +MP  P  +VW++LL+ C   GN+E+ + AAE  + +DP +S +  ML NI+AS 
Sbjct: 716 RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 775

Query: 739 GHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQI 776
           G W +  ++R  M+   V K PG+SWI I   VH+FL++D  H + ++IY +L++L++QI
Sbjct: 776 GMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830

[Close]

BLAST of Carg00997 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.5e-123
Identity = 228/712 (32.02%), Postives = 389/712 (54.63%), Query Frame = 0


Query: 75  YDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHM 134
           ++  I +  K GL  EAL+ +   +    SP +  T+  +I  C+ L   E G  ++  +
Sbjct: 74  WNSIIRAFSKNGLFPEALEFYGKLRESKVSP-DKYTFPSVIKACAGLFDAEMGDLVYEQI 133

Query: 135 MTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAI 194
           +   ++ D+ + N +++MY + G L  AR VFD MP++++VSW S+ISGYS +G  + A+
Sbjct: 134 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 193

Query: 195 TLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMY 254
            +Y ++  S   PD FT+ SVL +   L      + LH   LKS     ++  N L++MY
Sbjct: 194 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 253

Query: 255 TKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIF 314
            K+ +  DA  VF  +  +D +S+++MI G+ +     E++ +F E L Q  ++P+    
Sbjct: 254 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTV 313

Query: 315 GSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEK 374
            S   AC  L + +  + I+   +K G   ++     L D+YAKC  + +AR VFN +E 
Sbjct: 314 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 373

Query: 375 PDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQV 434
            D V+WN+II+G+   GD+ E+M LF  M I     + +T L L+   +    L  G  +
Sbjct: 374 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 433

Query: 435 HS---------------SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQ 494
           HS               +L+ MY+KC  + D+L+IF  +G   D V+WNT++ AC+    
Sbjct: 434 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGD 493

Query: 495 AGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNA 554
               L++T  M  S + PD  T    L     +A+  +G ++HC +++ G   +  + NA
Sbjct: 494 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 553

Query: 555 LINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPN 614
           LI MY KCG L ++ ++F+ +   D+++W+ +I  Y   G GE+A + +  M   G+ P+
Sbjct: 554 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPD 613

Query: 615 EITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFI 674
            + F+ I+ ACSH G+V+EGL  +  M+    I P  EH +C+VDLL+R+  +  AE+FI
Sbjct: 614 SVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 673

Query: 675 NQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWN 734
             MP  PD  +W ++L AC+  G++E  +R + ++++ +P +    ++  N +A+   W+
Sbjct: 674 QAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWD 733

Query: 735 DLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEEL 772
            ++ +R S++   ++K PG SWIE+   VHVF + D   P+   IY+ LE L
Sbjct: 734 KVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781

[Close]

BLAST of Carg00997 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 7.3e-123
Identity = 247/729 (33.88%), Postives = 391/729 (53.64%), Query Frame = 0


Query: 84   KKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDM 143
            K+G    A++ F   +  S     S T   +++    +  L+ G  +H   +      ++
Sbjct: 304  KRGCETVAIEYFFNMRKSSVKSTRS-TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 363

Query: 144  ILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRS 203
             + + +++MY KC  ++ A  VF+A+  KN V W +MI GY+H G+    + L++ M  S
Sbjct: 364  YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 423

Query: 204  GCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADA 263
            G   D FT  S+L +C+   D  +  Q H+ ++K +   +L   NAL+ MY K   + DA
Sbjct: 424  GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 483

Query: 264  INVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTK 323
              +F  +  +D ++W+++I  + +   E EA  LF+ M    +      +  S   ACT 
Sbjct: 484  RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL-ASTLKACTH 543

Query: 324  LLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAI 383
            +     G+Q+H L +K GL  D   G SL DMY+KC  ++ AR VF+ + +  +V+ NA+
Sbjct: 544  VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 603

Query: 384  IAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS------- 443
            IAG+ S  +++E++ LF +M   G+ P+++T  +++ AC +P  L  G Q H        
Sbjct: 604  IAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 663

Query: 444  ---------SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAG---EVL 503
                     SLL MY     + +A  +F ++ +   IV W  M+     H+Q G   E L
Sbjct: 664  SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG---HSQNGFYEEAL 723

Query: 504  RLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMY 563
            +  K M    + PD  T   VL     ++S   G  +H LI     +LD   SN LI+MY
Sbjct: 724  KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 783

Query: 564  MKCGSLGSAQKMFDSI-DNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITF 623
             KCG +  + ++FD +    +++SW+SLI GYA+ G  E+A K++ +MR   + P+EITF
Sbjct: 784  AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 843

Query: 624  VGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMP 683
            +G+LTACSH G V +G K++  M  + GI    +H +CMVDLL R G L  A+DFI    
Sbjct: 844  LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 903

Query: 684  FDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQ 743
              PD  +W +LL AC++HG+   G+ +AEK+++ +P NS+A V+L NI+AS G W     
Sbjct: 904  LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 963

Query: 744  LRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSC--- 790
            LR  MR   V KVPG SWI+++ R H+F A D  H E  +I   LE+L   + DD+    
Sbjct: 964  LRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNP 1023

[Close]

BLAST of Carg00997 vs. ExPASy Swiss-Prot
Match: Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.6e-122
Identity = 243/725 (33.52%), Postives = 405/725 (55.86%), Query Frame = 0


Query: 76  DDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMM 135
           D  I+     G  R A+ A +        P++S+T++ L+ +C   R    G+ +H  ++
Sbjct: 30  DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89

Query: 136 TFNYQPDMILQNHILNMYGKCGSLKEARNVFDAM---PLKNVVSWTSMISGYSHYGQEDN 195
            F+ +PD +L N ++++Y K G   +A +VF+ M     ++VVSW++M++ Y + G+E +
Sbjct: 90  EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149

Query: 196 AITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKS-EFGGHLIAQNALI 255
           AI ++V+    G  P+ +   +V+++CS  D   + R     ++K+  F   +    +LI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209

Query: 256 SMYTK-YNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPN 315
            M+ K  N   +A  VF  +   ++++W+ MI    + G+  EA+  F +M+    ++ +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESD 269

Query: 316 EFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCR---FLRSART 375
           +F   S FSAC +L   + G+Q+H   I+ GL  D    CSL DMYAKC     +   R 
Sbjct: 270 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRK 329

Query: 376 VFNQIEKPDLVAWNAIIAGF-ASVGDVKESMSLFSQMRITG-LAPNDVTVLSLLCAC--- 435
           VF+++E   +++W A+I G+  +     E+++LFS+M   G + PN  T  S   AC   
Sbjct: 330 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 389

Query: 436 SEPVM------------LYQGMQVHSSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTM 495
           S+P +            L     V +S++SM+ K   + DA + FE +  K ++VS+NT 
Sbjct: 390 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTF 449

Query: 496 LMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGL 555
           L     +    +  +L   +    +     T  ++L     + S   G Q+H  ++K GL
Sbjct: 450 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 509

Query: 556 NLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRT 615
           + +  V NALI+MY KCGS+ +A ++F+ ++N ++ISW+S+I G+A+ G      + +  
Sbjct: 510 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 569

Query: 616 MRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAG 675
           M   GVKPNE+T+V IL+ACSH+G+V EG + + +M E+  I P  EH +CMVDLL RAG
Sbjct: 570 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 629

Query: 676 CLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCN 735
            L  A +FIN MPF  D++VW+T L AC+VH N E+GK AA K+L+ DP   AA + L N
Sbjct: 630 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 689

Query: 736 IHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEE 776
           I+A +G W +  ++R  M++ ++ K  G SWIE+ D++H F   D+ HP   +IY  L+ 
Sbjct: 690 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 749

[Close]

BLAST of Carg00997 vs. ExPASy TrEMBL
Match: A0A6J1G6A4 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451180 PE=4 SV=1)

HSP 1 Score: 1481.1 bits (3833), Expect = 0.0e+00
Identity = 734/765 (95.95%), Postives = 738/765 (96.47%), Query Frame = 0


Query: 40  ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQ 99
           ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKK LNREALQAFETFQ
Sbjct: 29  ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKWLNREALQAFETFQ 88

Query: 100 NCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSL 159
            CSNSPLNSITYTHLINTC SLRFLEHGRKIHRHM TFNYQPDMILQNHILNMYGKCGSL
Sbjct: 89  KCSNSPLNSITYTHLINTCCSLRFLEHGRKIHRHMTTFNYQPDMILQNHILNMYGKCGSL 148

Query: 160 KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSC 219
           KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFT GSVLKSC
Sbjct: 149 KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTFGSVLKSC 208

Query: 220 SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 279
           SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS
Sbjct: 209 SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 268

Query: 280 SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 339
           SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK
Sbjct: 269 SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 328

Query: 340 FGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL 399
           FGLGSDAFAGCSLCDMYAKC FLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKES SL
Sbjct: 329 FGLGSDAFAGCSLCDMYAKCGFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESTSL 388

Query: 400 FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS---------------SLLSMYSK 459
           FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS               SLLSMYSK
Sbjct: 389 FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHSYIVQMGFDSEIPVCNSLLSMYSK 448

Query: 460 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN 519
           CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN
Sbjct: 449 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN 508

Query: 520 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPD 579
           VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSA+K+FDSI+NPD
Sbjct: 509 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSARKIFDSIENPD 568

Query: 580 IISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 639
           IISWSSLIVGYAQAGCGEEAFKL+RTMRGLGVKPNEITFVG LTACSHIGMVEEGLKLYR
Sbjct: 569 IISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITFVGFLTACSHIGMVEEGLKLYR 628

Query: 640 AMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL 699
            MQEEDGIAPTREHCSCMVDLLARAGCLD AEDFINQMPFDPDIVVWKTLLAACKVHGNL
Sbjct: 629 TMQEEDGIAPTREHCSCMVDLLARAGCLDEAEDFINQMPFDPDIVVWKTLLAACKVHGNL 688

Query: 700 EVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI 759
           EVGKRAAEKVLKTDP NSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI
Sbjct: 689 EVGKRAAEKVLKTDPSNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI 748

Query: 760 KDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMESFD 790
           KDRVHVFLAEDSLHPER RIYRMLEELMLQILDDSCDPIQMESFD
Sbjct: 749 KDRVHVFLAEDSLHPERGRIYRMLEELMLQILDDSCDPIQMESFD 793

[Close]

BLAST of Carg00997 vs. ExPASy TrEMBL
Match: A0A6J1KU81 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498713 PE=4 SV=1)

HSP 1 Score: 1459.1 bits (3776), Expect = 0.0e+00
Identity = 720/764 (94.24%), Postives = 735/764 (96.20%), Query Frame = 0


Query: 40  ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQ 99
           ATSLKNFKPRLQLAFSHTRPNTQLAFSP+PV+EQSYDDYIISLCKKGLNREALQAFETFQ
Sbjct: 29  ATSLKNFKPRLQLAFSHTRPNTQLAFSPTPVTEQSYDDYIISLCKKGLNREALQAFETFQ 88

Query: 100 NCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSL 159
            CSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHM TFNYQPD++LQNHILNMYGKCGSL
Sbjct: 89  KCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMTTFNYQPDILLQNHILNMYGKCGSL 148

Query: 160 KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSC 219
           KEARNVFDAM LKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFT GSVLKSC
Sbjct: 149 KEARNVFDAMSLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTFGSVLKSC 208

Query: 220 SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 279
           SGL+DSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS
Sbjct: 209 SGLEDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 268

Query: 280 SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 339
           SMIAGFSRFGYELEALFLFREMLSQPVY PNEFIFGSAFSACTKLLEPNYGRQIHGLCIK
Sbjct: 269 SMIAGFSRFGYELEALFLFREMLSQPVYHPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 328

Query: 340 FGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL 399
           FGLGSDAFAGCSLCDMYAKC FLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL
Sbjct: 329 FGLGSDAFAGCSLCDMYAKCGFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL 388

Query: 400 FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS---------------SLLSMYSK 459
           FSQMRITGLA NDVTVLSLLCACS+PVMLYQGMQVHS               SLLSMYSK
Sbjct: 389 FSQMRITGLASNDVTVLSLLCACSDPVMLYQGMQVHSYIVQMGFDSEIPVCNSLLSMYSK 448

Query: 460 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN 519
           CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPD+VTLTN
Sbjct: 449 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDYVTLTN 508

Query: 520 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPD 579
           VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSV NALINMYMKCGS+GSA+K+FDSIDNPD
Sbjct: 509 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVLNALINMYMKCGSVGSARKIFDSIDNPD 568

Query: 580 IISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 639
           IISWSSLIVGYAQAGCGEEAFKL+RTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR
Sbjct: 569 IISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 628

Query: 640 AMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL 699
            MQEEDGIAPT+EHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL
Sbjct: 629 TMQEEDGIAPTKEHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL 688

Query: 700 EVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI 759
           EVGKRAAE VLK+DP NSAALVMLCN+HASSGHWNDLA+LRSSMRQMDVSKVPGQSWIEI
Sbjct: 689 EVGKRAAENVLKSDPSNSAALVMLCNMHASSGHWNDLARLRSSMRQMDVSKVPGQSWIEI 748

Query: 760 KDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMESF 789
           KDRVHVFLAEDSLHPER RIY MLEEL LQILDDSCDPIQMESF
Sbjct: 749 KDRVHVFLAEDSLHPERGRIYTMLEELRLQILDDSCDPIQMESF 792

[Close]

BLAST of Carg00997 vs. ExPASy TrEMBL
Match: A0A6J1G656 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451180 PE=4 SV=1)

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 643/671 (95.83%), Postives = 647/671 (96.42%), Query Frame = 0


Query: 134 MMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA 193
           M TFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA
Sbjct: 1   MTTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA 60

Query: 194 ITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM 253
           ITLYVQMFRSGCTPDHFT GSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM
Sbjct: 61  ITLYVQMFRSGCTPDHFTFGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM 120

Query: 254 YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI 313
           YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI
Sbjct: 121 YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI 180

Query: 314 FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIE 373
           FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKC FLRSARTVFNQIE
Sbjct: 181 FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCGFLRSARTVFNQIE 240

Query: 374 KPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQ 433
           KPDLVAWNAIIAGFASVGDVKES SLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQ
Sbjct: 241 KPDLVAWNAIIAGFASVGDVKESTSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQ 300

Query: 434 VHS---------------SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHN 493
           VHS               SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHN
Sbjct: 301 VHSYIVQMGFDSEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHN 360

Query: 494 QAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSN 553
           QAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSN
Sbjct: 361 QAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSN 420

Query: 554 ALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKP 613
           ALINMYMKCGSLGSA+K+FDSI+NPDIISWSSLIVGYAQAGCGEEAFKL+RTMRGLGVKP
Sbjct: 421 ALINMYMKCGSLGSARKIFDSIENPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKP 480

Query: 614 NEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDF 673
           NEITFVG LTACSHIGMVEEGLKLYR MQEEDGIAPTREHCSCMVDLLARAGCLD AEDF
Sbjct: 481 NEITFVGFLTACSHIGMVEEGLKLYRTMQEEDGIAPTREHCSCMVDLLARAGCLDEAEDF 540

Query: 674 INQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHW 733
           INQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDP NSAALVMLCNIHASSGHW
Sbjct: 541 INQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPSNSAALVMLCNIHASSGHW 600

Query: 734 NDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDD 790
           NDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPER RIYRMLEELMLQILDD
Sbjct: 601 NDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERGRIYRMLEELMLQILDD 660

[Close]

BLAST of Carg00997 vs. ExPASy TrEMBL
Match: A0A6J1CVF9 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015138 PE=4 SV=1)

HSP 1 Score: 1293.9 bits (3347), Expect = 0.0e+00
Identity = 638/765 (83.40%), Postives = 679/765 (88.76%), Query Frame = 0


Query: 38  NMATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFET 97
           ++A  +  FKPRLQ AFSH RPNTQ+AFSP P  EQSYDDYIISLCKK   REALQAF+ 
Sbjct: 27  SLANPINIFKPRLQFAFSHIRPNTQIAFSPCPAPEQSYDDYIISLCKKNFPREALQAFDI 86

Query: 98  FQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCG 157
           F+ C++ PL SITY+HLIN CS LR LEHGR+IH HM+ FNYQPD+ILQNHILNMYGKCG
Sbjct: 87  FRKCTSFPLKSITYSHLINACSYLRSLEHGRRIHGHMLAFNYQPDLILQNHILNMYGKCG 146

Query: 158 SLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLK 217
           SLKEARNVFDAMP +NVVSWTS+ISGYSHYGQEDNAITLYVQM +SG  PDHFT GSV+K
Sbjct: 147 SLKEARNVFDAMPQRNVVSWTSLISGYSHYGQEDNAITLYVQMLQSGYVPDHFTFGSVIK 206

Query: 218 SCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLIS 277
           SCSGLDD MLARQLHAHVLKSEFGGHLI+QNALISMYTK++QI+DAINVF+ I+ KDLIS
Sbjct: 207 SCSGLDDFMLARQLHAHVLKSEFGGHLISQNALISMYTKFSQISDAINVFTRIMAKDLIS 266

Query: 278 WSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLC 337
           W SMIAGFS+ GYELEAL  FREMLS  VYQPN+FIFGSAFSAC+KLLEPNYGRQIH LC
Sbjct: 267 WGSMIAGFSQLGYELEALHHFREMLSGHVYQPNQFIFGSAFSACSKLLEPNYGRQIHSLC 326

Query: 338 IKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESM 397
           +KFGLGSD FAGCSLCDMYAKC  L SARTVF QIEKPDLV+WNAIIAGFAS GD KESM
Sbjct: 327 MKFGLGSDLFAGCSLCDMYAKCGLLESARTVFYQIEKPDLVSWNAIIAGFASAGDAKESM 386

Query: 398 SLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS---------------SLLSMY 457
           SLFSQMR TGLA NDVTVLSLLCACSEPVML QGMQVHS                LL+MY
Sbjct: 387 SLFSQMRHTGLAANDVTVLSLLCACSEPVMLCQGMQVHSYIIKMGFYLEIHVCNCLLNMY 446

Query: 458 SKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTL 517
           SKCSNLNDAL +FEDI NKADIVSWNT+L ACL  NQAGEVLRLTK MLVS IKPDHVT+
Sbjct: 447 SKCSNLNDALGVFEDIENKADIVSWNTVLTACLQQNQAGEVLRLTKQMLVSSIKPDHVTV 506

Query: 518 TNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDN 577
           TNVLVSSGQ+ASYEVGSQVHC I+KSGLNLDTSVSNALINMY KCGSLGSAQKMFDSIDN
Sbjct: 507 TNVLVSSGQVASYEVGSQVHCFIIKSGLNLDTSVSNALINMYTKCGSLGSAQKMFDSIDN 566

Query: 578 PDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 637
           PDIISWSSLIVGYAQAG G++AFKL+RTMRGLGVKPNEITFV ILTACSHIGMVEEGLKL
Sbjct: 567 PDIISWSSLIVGYAQAGSGDKAFKLFRTMRGLGVKPNEITFVVILTACSHIGMVEEGLKL 626

Query: 638 YRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHG 697
           YR MQEEDGI+PTREHCSCMVDLLARAGCLDGAE+FI QMPFDPDIVVWKTLLAACK+HG
Sbjct: 627 YRTMQEEDGISPTREHCSCMVDLLARAGCLDGAEEFIKQMPFDPDIVVWKTLLAACKIHG 686

Query: 698 NLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWI 757
           NLE+G+RAAE VLK DP NSAALVMLCNIHASSGHW D A LRSSMRQMDVSKVPGQSWI
Sbjct: 687 NLEIGRRAAENVLKIDPSNSAALVMLCNIHASSGHWKDFALLRSSMRQMDVSKVPGQSWI 746

Query: 758 EIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMES 788
           EIKDRVHVFLAEDSLHPE  RIY MLEEL LQILDDSCDPIQM S
Sbjct: 747 EIKDRVHVFLAEDSLHPETGRIYTMLEELRLQILDDSCDPIQMVS 791

[Close]

BLAST of Carg00997 vs. ExPASy TrEMBL
Match: A0A6J1J911 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482386 PE=4 SV=1)

HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 628/763 (82.31%), Postives = 678/763 (88.86%), Query Frame = 0


Query: 40  ATSLKNFKPRLQLAFSHTRPNTQLAFSPSPVSEQSYDDYIISLCKKGLNREALQAFETFQ 99
           ATS+KNFKP+L LA SH R ++ LA  PSPV+E S+DD IISLCKK L+REALQAF+ F 
Sbjct: 57  ATSIKNFKPQLHLALSHIRFSSLLASPPSPVTEHSHDDNIISLCKKKLHREALQAFDIFH 116

Query: 100 NCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSL 159
            CS+SPLNSITYTHLI+ CSSLRFLEHGRKIH HM TFNYQPD+ILQNHILNMYGKCGSL
Sbjct: 117 KCSSSPLNSITYTHLIHACSSLRFLEHGRKIHCHMSTFNYQPDLILQNHILNMYGKCGSL 176

Query: 160 KEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSC 219
           KEARN+FDAMPLKN VSWTSMISGYSHYG++DNAITLYVQM RSG  PDHFT GSV+KSC
Sbjct: 177 KEARNIFDAMPLKNAVSWTSMISGYSHYGEDDNAITLYVQMLRSGHIPDHFTFGSVVKSC 236

Query: 220 SGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWS 279
           SGLDD MLARQLHAHVLKSEFGG+ IAQNALISMYTK++QIADA NVFSHIITKDLISW 
Sbjct: 237 SGLDDLMLARQLHAHVLKSEFGGNPIAQNALISMYTKFSQIADATNVFSHIITKDLISWG 296

Query: 280 SMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIK 339
           SMIAGFS+ G E+EAL  FREMLSQP+YQPNEF+FGSAFSAC+ L EPN GRQIHGLCIK
Sbjct: 297 SMIAGFSQLGCEIEALCHFREMLSQPIYQPNEFVFGSAFSACSNLSEPNCGRQIHGLCIK 356

Query: 340 FGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSL 399
           FGLGSD FAGCSLCDMYAKC FL SARTVF QIEKPDLVAWNAIIAGFASVGD KES+S 
Sbjct: 357 FGLGSDRFAGCSLCDMYAKCGFLGSARTVFCQIEKPDLVAWNAIIAGFASVGDAKESLSF 416

Query: 400 FSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS---------------SLLSMYSK 459
           FSQMR TGLA NDVTVLSLLCACSEP+ML QGMQVHS                LLSMYSK
Sbjct: 417 FSQMRHTGLASNDVTVLSLLCACSEPMMLNQGMQVHSYIVKTGFDLEVLVCNGLLSMYSK 476

Query: 460 CSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTN 519
           CS+LND+L+IFEDIGNKAD+VSWNTML AC   NQAGEVLRL K ML SHIK D VTLTN
Sbjct: 477 CSDLNDSLKIFEDIGNKADVVSWNTMLTACRLRNQAGEVLRLMKLMLASHIKSDRVTLTN 536

Query: 520 VLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPD 579
           VLVSSG IASYEVGSQVHC IMKSG NLDTSVSNALINMYMKCGSLG A+KMFDSID+PD
Sbjct: 537 VLVSSGLIASYEVGSQVHCFIMKSGQNLDTSVSNALINMYMKCGSLGCARKMFDSIDDPD 596

Query: 580 IISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 639
           +ISWSSLIVGYAQAGCGEEAF+L+RTMRGLG++PNEITF+GILTAC H+GMVEEGL+LYR
Sbjct: 597 VISWSSLIVGYAQAGCGEEAFELFRTMRGLGIRPNEITFLGILTACCHVGMVEEGLRLYR 656

Query: 640 AMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNL 699
            MQE+D I+PT+EHCSC+VDLLARAGCLD AEDFI +MPF+PDIVVW TLLAACKVHGNL
Sbjct: 657 TMQEQDDISPTKEHCSCIVDLLARAGCLDAAEDFIKKMPFEPDIVVWMTLLAACKVHGNL 716

Query: 700 EVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEI 759
           EVGKRAAE VL+ DP NSAALVMLCNIHASSGHW D A+LR SMR+MDVSKVPGQSWIEI
Sbjct: 717 EVGKRAAENVLRNDPSNSAALVMLCNIHASSGHWKDFARLRRSMRRMDVSKVPGQSWIEI 776

Query: 760 KDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSCDPIQMES 788
           KDRVHVF AEDSLHPER RIY MLEELMLQ+LDDSCDP+QMES
Sbjct: 777 KDRVHVFFAEDSLHPERGRIYIMLEELMLQLLDDSCDPLQMES 819

[Close]

BLAST of Carg00997 vs. TAIR 10
Match: AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 836.3 bits (2159), Expect = 2.1e-242
Identity = 410/742 (55.26%), Postives = 540/742 (72.78%), Query Frame = 0


Query: 60  NTQLAFSPSPVS----EQSYDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLI 119
           N+Q+  + S VS    E+  +D+I SLCK    REAL+AF+  Q  S+  +   TY  LI
Sbjct: 15  NSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLI 74

Query: 120 NTCSSLRFLEHGRKIHRHMMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVV 179
             CSS R L  GRKIH H++  N + D IL NHIL+MYGKCGSL++AR VFD MP +N+V
Sbjct: 75  CACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLV 134

Query: 180 SWTSMISGYSHYGQEDNAITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHV 239
           S+TS+I+GYS  GQ   AI LY++M +    PD F  GS++K+C+   D  L +QLHA V
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194

Query: 240 LKSEFGGHLIAQNALISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEAL 299
           +K E   HLIAQNALI+MY ++NQ++DA  VF  I  KDLISWSS+IAGFS+ G+E EAL
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254

Query: 300 FLFREMLSQPVYQPNEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDM 359
              +EMLS  V+ PNE+IFGS+  AC+ LL P+YG QIHGLCIK  L  +A AGCSLCDM
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314

Query: 360 YAKCRFLRSARTVFNQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTV 419
           YA+C FL SAR VF+QIE+PD  +WN IIAG A+ G   E++S+FSQMR +G  P+ +++
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374

Query: 420 LSLLCACSEPVMLYQGMQVHS---------------SLLSMYSKCSNLNDALQIFEDIGN 479
            SLLCA ++P+ L QGMQ+HS               SLL+MY+ CS+L     +FED  N
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434

Query: 480 KADIVSWNTMLMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQ 539
            AD VSWNT+L ACL H Q  E+LRL K MLVS  +PDH+T+ N+L    +I+S ++GSQ
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494

Query: 540 VHCLIMKSGLNLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGC 599
           VHC  +K+GL  +  + N LI+MY KCGSLG A+++FDS+DN D++SWS+LIVGYAQ+G 
Sbjct: 495 VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGF 554

Query: 600 GEEAFKLYRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCS 659
           GEEA  L++ M+  G++PN +TFVG+LTACSH+G+VEEGLKLY  MQ E GI+PT+EHCS
Sbjct: 555 GEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS 614

Query: 660 CMVDLLARAGCLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPY 719
           C+VDLLARAG L+ AE FI++M  +PD+VVWKTLL+ACK  GN+ + ++AAE +LK DP+
Sbjct: 615 CVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPF 674

Query: 720 NSAALVMLCNIHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPE 779
           NS A V+LC++HASSG+W + A LRSSM++ DV K+PGQSWIEI+D++H+F AED  HPE
Sbjct: 675 NSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPE 734

Query: 780 RSRIYRMLEELMLQILDDSCDP 783
           R  IY +L  +  Q+LD+ C+P
Sbjct: 735 RDDIYTVLHNIWSQMLDE-CNP 755

[Close]

BLAST of Carg00997 vs. TAIR 10
Match: AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 456.1 bits (1172), Expect = 5.9e-128
Identity = 250/720 (34.72%), Postives = 406/720 (56.39%), Query Frame = 0


Query: 79  IISLCK-KGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGR----KIHRH 138
           ++S C   G+  E+L  F  F        N    +  I  CS L     GR    ++   
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSF 175

Query: 139 MMTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNA 198
           ++   +  D+ +   +++ Y K G++  AR VFDA+P K+ V+WT+MISG    G+   +
Sbjct: 176 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 235

Query: 199 ITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISM 258
           + L+ Q+      PD + L +VL +CS L      +Q+HAH+L+          N LI  
Sbjct: 236 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 295

Query: 259 YTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFI 318
           Y K  ++  A  +F+ +  K++ISW+++++G+ +     EA+ LF  M S+   +P+ + 
Sbjct: 296 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYA 355

Query: 319 FGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIE 378
             S  ++C  L    +G Q+H   IK  LG+D++   SL DMYAKC  L  AR VF+   
Sbjct: 356 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 415

Query: 379 KPDLVAWNAIIAGFASVG---DVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQ 438
             D+V +NA+I G++ +G   ++ E++++F  MR   + P+ +T +SLL A +    L  
Sbjct: 416 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 475

Query: 439 GMQVH---------------SSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACL 498
             Q+H               S+L+ +YS C  L D+  +F+++  K D+V WN+M    +
Sbjct: 476 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYV 535

Query: 499 HHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTS 558
             ++  E L L   + +S  +PD  T  N++ ++G +AS ++G + HC ++K GL  +  
Sbjct: 536 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 595

Query: 559 VSNALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLG 618
           ++NAL++MY KCGS   A K FDS  + D++ W+S+I  YA  G G++A ++   M   G
Sbjct: 596 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 655

Query: 619 VKPNEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGA 678
           ++PN ITFVG+L+ACSH G+VE+GLK +  M    GI P  EH  CMV LL RAG L+ A
Sbjct: 656 IEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKA 715

Query: 679 EDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASS 738
            + I +MP  P  +VW++LL+ C   GN+E+ + AAE  + +DP +S +  ML NI+AS 
Sbjct: 716 RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 775

Query: 739 GHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQI 776
           G W +  ++R  M+   V K PG+SWI I   VH+FL++D  H + ++IY +L++L++QI
Sbjct: 776 GMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830

[Close]

BLAST of Carg00997 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 445.3 bits (1144), Expect = 1.0e-124
Identity = 228/712 (32.02%), Postives = 389/712 (54.63%), Query Frame = 0


Query: 75  YDDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHM 134
           ++  I +  K GL  EAL+ +   +    SP +  T+  +I  C+ L   E G  ++  +
Sbjct: 74  WNSIIRAFSKNGLFPEALEFYGKLRESKVSP-DKYTFPSVIKACAGLFDAEMGDLVYEQI 133

Query: 135 MTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAI 194
           +   ++ D+ + N +++MY + G L  AR VFD MP++++VSW S+ISGYS +G  + A+
Sbjct: 134 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 193

Query: 195 TLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMY 254
            +Y ++  S   PD FT+ SVL +   L      + LH   LKS     ++  N L++MY
Sbjct: 194 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 253

Query: 255 TKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIF 314
            K+ +  DA  VF  +  +D +S+++MI G+ +     E++ +F E L Q  ++P+    
Sbjct: 254 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTV 313

Query: 315 GSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEK 374
            S   AC  L + +  + I+   +K G   ++     L D+YAKC  + +AR VFN +E 
Sbjct: 314 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 373

Query: 375 PDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQV 434
            D V+WN+II+G+   GD+ E+M LF  M I     + +T L L+   +    L  G  +
Sbjct: 374 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 433

Query: 435 HS---------------SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQ 494
           HS               +L+ MY+KC  + D+L+IF  +G   D V+WNT++ AC+    
Sbjct: 434 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGD 493

Query: 495 AGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNA 554
               L++T  M  S + PD  T    L     +A+  +G ++HC +++ G   +  + NA
Sbjct: 494 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 553

Query: 555 LINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPN 614
           LI MY KCG L ++ ++F+ +   D+++W+ +I  Y   G GE+A + +  M   G+ P+
Sbjct: 554 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPD 613

Query: 615 EITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFI 674
            + F+ I+ ACSH G+V+EGL  +  M+    I P  EH +C+VDLL+R+  +  AE+FI
Sbjct: 614 SVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 673

Query: 675 NQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWN 734
             MP  PD  +W ++L AC+  G++E  +R + ++++ +P +    ++  N +A+   W+
Sbjct: 674 QAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWD 733

Query: 735 DLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEEL 772
            ++ +R S++   ++K PG SWIE+   VHVF + D   P+   IY+ LE L
Sbjct: 734 KVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781

[Close]

BLAST of Carg00997 vs. TAIR 10
Match: AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 443.0 bits (1138), Expect = 5.2e-124
Identity = 247/729 (33.88%), Postives = 391/729 (53.64%), Query Frame = 0


Query: 84   KKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMMTFNYQPDM 143
            K+G    A++ F   +  S     S T   +++    +  L+ G  +H   +      ++
Sbjct: 304  KRGCETVAIEYFFNMRKSSVKSTRS-TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 363

Query: 144  ILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMFRS 203
             + + +++MY KC  ++ A  VF+A+  KN V W +MI GY+H G+    + L++ M  S
Sbjct: 364  YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 423

Query: 204  GCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNALISMYTKYNQIADA 263
            G   D FT  S+L +C+   D  +  Q H+ ++K +   +L   NAL+ MY K   + DA
Sbjct: 424  GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 483

Query: 264  INVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPNEFIFGSAFSACTK 323
              +F  +  +D ++W+++I  + +   E EA  LF+ M    +      +  S   ACT 
Sbjct: 484  RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL-ASTLKACTH 543

Query: 324  LLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCRFLRSARTVFNQIEKPDLVAWNAI 383
            +     G+Q+H L +K GL  D   G SL DMY+KC  ++ AR VF+ + +  +V+ NA+
Sbjct: 544  VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 603

Query: 384  IAGFASVGDVKESMSLFSQMRITGLAPNDVTVLSLLCACSEPVMLYQGMQVHS------- 443
            IAG+ S  +++E++ LF +M   G+ P+++T  +++ AC +P  L  G Q H        
Sbjct: 604  IAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 663

Query: 444  ---------SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMACLHHNQAG---EVL 503
                     SLL MY     + +A  +F ++ +   IV W  M+     H+Q G   E L
Sbjct: 664  SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG---HSQNGFYEEAL 723

Query: 504  RLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDTSVSNALINMY 563
            +  K M    + PD  T   VL     ++S   G  +H LI     +LD   SN LI+MY
Sbjct: 724  KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 783

Query: 564  MKCGSLGSAQKMFDSI-DNPDIISWSSLIVGYAQAGCGEEAFKLYRTMRGLGVKPNEITF 623
             KCG +  + ++FD +    +++SW+SLI GYA+ G  E+A K++ +MR   + P+EITF
Sbjct: 784  AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 843

Query: 624  VGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAGCLDGAEDFINQMP 683
            +G+LTACSH G V +G K++  M  + GI    +H +CMVDLL R G L  A+DFI    
Sbjct: 844  LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 903

Query: 684  FDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCNIHASSGHWNDLAQ 743
              PD  +W +LL AC++HG+   G+ +AEK+++ +P NS+A V+L NI+AS G W     
Sbjct: 904  LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 963

Query: 744  LRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEELMLQILDDSC--- 790
            LR  MR   V KVPG SWI+++ R H+F A D  H E  +I   LE+L   + DD+    
Sbjct: 964  LRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNP 1023

[Close]

BLAST of Carg00997 vs. TAIR 10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 441.8 bits (1135), Expect = 1.1e-123
Identity = 243/725 (33.52%), Postives = 405/725 (55.86%), Query Frame = 0


Query: 76  DDYIISLCKKGLNREALQAFETFQNCSNSPLNSITYTHLINTCSSLRFLEHGRKIHRHMM 135
           D  I+     G  R A+ A +        P++S+T++ L+ +C   R    G+ +H  ++
Sbjct: 30  DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89

Query: 136 TFNYQPDMILQNHILNMYGKCGSLKEARNVFDAM---PLKNVVSWTSMISGYSHYGQEDN 195
            F+ +PD +L N ++++Y K G   +A +VF+ M     ++VVSW++M++ Y + G+E +
Sbjct: 90  EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149

Query: 196 AITLYVQMFRSGCTPDHFTLGSVLKSCSGLDDSMLARQLHAHVLKS-EFGGHLIAQNALI 255
           AI ++V+    G  P+ +   +V+++CS  D   + R     ++K+  F   +    +LI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209

Query: 256 SMYTK-YNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQPN 315
            M+ K  N   +A  VF  +   ++++W+ MI    + G+  EA+  F +M+    ++ +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESD 269

Query: 316 EFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCR---FLRSART 375
           +F   S FSAC +L   + G+Q+H   I+ GL  D    CSL DMYAKC     +   R 
Sbjct: 270 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRK 329

Query: 376 VFNQIEKPDLVAWNAIIAGF-ASVGDVKESMSLFSQMRITG-LAPNDVTVLSLLCAC--- 435
           VF+++E   +++W A+I G+  +     E+++LFS+M   G + PN  T  S   AC   
Sbjct: 330 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 389

Query: 436 SEPVM------------LYQGMQVHSSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTM 495
           S+P +            L     V +S++SM+ K   + DA + FE +  K ++VS+NT 
Sbjct: 390 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTF 449

Query: 496 LMACLHHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGL 555
           L     +    +  +L   +    +     T  ++L     + S   G Q+H  ++K GL
Sbjct: 450 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 509

Query: 556 NLDTSVSNALINMYMKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLYRT 615
           + +  V NALI+MY KCGS+ +A ++F+ ++N ++ISW+S+I G+A+ G      + +  
Sbjct: 510 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 569

Query: 616 MRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRAMQEEDGIAPTREHCSCMVDLLARAG 675
           M   GVKPNE+T+V IL+ACSH+G+V EG + + +M E+  I P  EH +CMVDLL RAG
Sbjct: 570 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 629

Query: 676 CLDGAEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPYNSAALVMLCN 735
            L  A +FIN MPF  D++VW+T L AC+VH N E+GK AA K+L+ DP   AA + L N
Sbjct: 630 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 689

Query: 736 IHASSGHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERSRIYRMLEE 776
           I+A +G W +  ++R  M++ ++ K  G SWIE+ D++H F   D+ HP   +IY  L+ 
Sbjct: 690 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 749

The following BLAST results are available for this feature:

BLAST of Carg00997 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028004.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022947264.1	0.0e+00	95.95	pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor...	[more]
XP_023005822.1	0.0e+00	94.24	pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor...	[more]
XP_022947273.1	0.0e+00	95.83	pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor...	[more]
XP_022145760.1	0.0e+00	83.40	pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 ...	[more]

BLAST of Carg00997 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFI1	2.9e-241	55.26	Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop...	[more]
Q9SVA5	8.3e-127	34.72	Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX...	[more]
Q9SS60	1.5e-123	32.02	Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX...	[more]
Q9SS83	7.3e-123	33.88	Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop...	[more]
Q5G1T1	1.6e-122	33.52	Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop...	[more]

BLAST of Carg00997 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6A4	0.0e+00	95.95	pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor...	[more]
A0A6J1KU81	0.0e+00	94.24	pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor...	[more]
A0A6J1G656	0.0e+00	95.83	pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor...	[more]
A0A6J1CVF9	0.0e+00	83.40	pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 ...	[more]
A0A6J1J911	0.0e+00	82.31	pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cuc...	[more]

BLAST of Carg00997 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53360.1	2.1e-242	55.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39530.1	5.9e-128	34.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G03580.1	1.0e-124	32.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G09040.1	5.2e-124	33.88	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G49170.1	1.1e-123	33.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 224..330 e-value: 1.6E-14 score: 55.7 coord: 124..223 e-value: 6.7E-24 score: 86.2 coord: 430..523 e-value: 1.7E-14 score: 55.6 coord: 331..429 e-value: 4.1E-17 score: 64.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 563..753 e-value: 1.9E-33 score: 118.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 375..422 e-value: 1.2E-9 score: 38.2 coord: 172..219 e-value: 7.6E-10 score: 38.8 coord: 563..611 e-value: 9.6E-10 score: 38.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 465..492 e-value: 0.064 score: 13.5 coord: 538..559 e-value: 0.31 score: 11.4 coord: 436..458 e-value: 0.52 score: 10.7 coord: 276..303 e-value: 5.9E-5 score: 23.0 coord: 639..662 e-value: 0.22 score: 11.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 602..635 e-value: 8.8E-4 score: 17.3 coord: 175..208 e-value: 1.1E-6 score: 26.4 coord: 378..411 e-value: 1.1E-5 score: 23.3 coord: 566..600 e-value: 6.2E-7 score: 27.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 274..308 score: 9.021208
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 376..410 score: 11.73961
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 107..141 score: 9.185627
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 173..207 score: 11.750571
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 463..497 score: 9.284279
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 599..634 score: 8.549871
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 564..598 score: 12.057487
None	No IPR available	PANTHER	PTHR24015:SF1672	OS06G0506100 PROTEIN	coord: 429..767 coord: 76..308
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 429..767 coord: 76..308
None	No IPR available	PANTHER	PTHR24015:SF1672	OS06G0506100 PROTEIN	coord: 308..435
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 308..435

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00997-RA	Carg00997-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding