Carg00969 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00969
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription initiation factor TFIID subunit 8
Location	Carg_Chr06: 1849680 .. 1850747 (-)
RNA-Seq Expression	Carg00969
Synteny	Carg00969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGATGGGGCTAGGAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGAAAATGCAGAGGCAATGAGTTTGGACGAGAGGTGTCGAGAATTGCTGTGGCTCAGATATGTAATAGTGCAGGGTTTCAGAGATTCAAGGAGTCAGCTCTAGACGCATTGGTCGACATCGCTATCAAGTACCTTCGCCATTTGGGTAAGATAGCAGCATTCTATGCTAATTTGGCTGGTAGAATTGAGTGCAATGTTTTTGATATAATTAGAGGGCTTGAAGAGTTGGAATCATCACAGGGGTTTCAGGAGGCTTGGGAACCAATTCAATGTCTTGCTAATTCAGGGTCAGTGAAGAACATTGTTCGGTACGTGAATTCAGTTGAAGAGATCCCTTTTGCTCACCCATTACCATGTTTCCCTGTGATCAGAAACAGGAGGGCAATTCCAAGTTTCCTTCAGATTGGTGAAACCCCACCTGGCAAACACATTGCCGATTGGTTACCAGCTTTCCCTGATGCTCATACTTACGACCCTTCAACTTTGTGGAGGAGGAGCCCGGGTGAGCCGTGTGCCGAGAAGATGGAGATGTCGAGGCAGCGAAGGAAGGCAGAGAAATCCATGTCGGGTTTGCAGAAGAGATTGTTATCCTGTGGTTCAGCAAGAAATGGCAATGGGGAGATTGAGTTAACAGGAGGTGAGAGTAATCCATTCCTTGGGACATGTTTGCAAGAGATGGAAGATGGGAGTGCCATGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGGTTGCTCCTGCCATTGAAGCGATTAATGGCTGTGGATTAGCTAAGAATGAGGACGACAAGGCAAGGATTCTTCCTATTGAGAGGCCTCCTGTTCGTTTCAAGTTAGAAACTACCAAAACCTTTCTTAGAGGATCTAGGAATTTGAATGCTAAAATGGCAGGAAACAGGGAATCAGTGTTCTGGGTTAGACGAGATGATGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCCCAGACATTCTGAAGAAAACTCTCATGAGGAGCTCAACCTGTCCTGA

mRNA sequence

ATGAGCGATGGGGCTAGGAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGAAAATGCAGAGGCAATGAGTTTGGACGAGAGGTGTCGAGAATTGCTGTGGCTCAGATATGTAATAGTGCAGGGTTTCAGAGATTCAAGGAGTCAGCTCTAGACGCATTGGTCGACATCGCTATCAAGTACCTTCGCCATTTGGGTAAGATAGCAGCATTCTATGCTAATTTGGCTGGTAGAATTGAGTGCAATGTTTTTGATATAATTAGAGGGCTTGAAGAGTTGGAATCATCACAGGGGTTTCAGGAGGCTTGGGAACCAATTCAATGTCTTGCTAATTCAGGGTCAGTGAAGAACATTGTTCGGTACGTGAATTCAGTTGAAGAGATCCCTTTTGCTCACCCATTACCATGTTTCCCTGTGATCAGAAACAGGAGGGCAATTCCAAGTTTCCTTCAGATTGGTGAAACCCCACCTGGCAAACACATTGCCGATTGGTTACCAGCTTTCCCTGATGCTCATACTTACGACCCTTCAACTTTGTGGAGGAGGAGCCCGGGTGAGCCGTGTGCCGAGAAGATGGAGATGTCGAGGCAGCGAAGGAAGGCAGAGAAATCCATGTCGGGTTTGCAGAAGAGATTGTTATCCTGTGGTTCAGCAAGAAATGGCAATGGGGAGATTGAGTTAACAGGAGGTGAGAGTAATCCATTCCTTGGGACATGTTTGCAAGAGATGGAAGATGGGAGTGCCATGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGGTTGCTCCTGCCATTGAAGCGATTAATGGCTGTGGATTAGCTAAGAATGAGGACGACAAGGCAAGGATTCTTCCTATTGAGAGGCCTCCTGTTCGTTTCAAGTTAGAAACTACCAAAACCTTTCTTAGAGGATCTAGGAATTTGAATGCTAAAATGGCAGGAAACAGGGAATCAGTGTTCTGGGTTAGACGAGATGATGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCCCAGACATTCTGAAGAAAACTCTCATGAGGAGCTCAACCTGTCCTGA

Coding sequence (CDS)

ATGAGCGATGGGGCTAGGAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGAAAATGCAGAGGCAATGAGTTTGGACGAGAGGTGTCGAGAATTGCTGTGGCTCAGATATGTAATAGTGCAGGGTTTCAGAGATTCAAGGAGTCAGCTCTAGACGCATTGGTCGACATCGCTATCAAGTACCTTCGCCATTTGGGTAAGATAGCAGCATTCTATGCTAATTTGGCTGGTAGAATTGAGTGCAATGTTTTTGATATAATTAGAGGGCTTGAAGAGTTGGAATCATCACAGGGGTTTCAGGAGGCTTGGGAACCAATTCAATGTCTTGCTAATTCAGGGTCAGTGAAGAACATTGTTCGGTACGTGAATTCAGTTGAAGAGATCCCTTTTGCTCACCCATTACCATGTTTCCCTGTGATCAGAAACAGGAGGGCAATTCCAAGTTTCCTTCAGATTGGTGAAACCCCACCTGGCAAACACATTGCCGATTGGTTACCAGCTTTCCCTGATGCTCATACTTACGACCCTTCAACTTTGTGGAGGAGGAGCCCGGGTGAGCCGTGTGCCGAGAAGATGGAGATGTCGAGGCAGCGAAGGAAGGCAGAGAAATCCATGTCGGGTTTGCAGAAGAGATTGTTATCCTGTGGTTCAGCAAGAAATGGCAATGGGGAGATTGAGTTAACAGGAGGTGAGAGTAATCCATTCCTTGGGACATGTTTGCAAGAGATGGAAGATGGGAGTGCCATGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGGTTGCTCCTGCCATTGAAGCGATTAATGGCTGTGGATTAGCTAAGAATGAGGACGACAAGGCAAGGATTCTTCCTATTGAGAGGCCTCCTGTTCGTTTCAAGTTAGAAACTACCAAAACCTTTCTTAGAGGATCTAGGAATTTGAATGCTAAAATGGCAGGAAACAGGGAATCAGTGTTCTGGGTTAGACGAGATGATGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCCCAGACATTCTGAAGAAAACTCTCATGAGGAGCTCAACCTGTCCTGA

Protein sequence

MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIAIKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNIVRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPSTLWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGTCLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETTKTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS

Homology

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BLAST of Carg00969 vs. NCBI nr
Match: KAG7028031.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 710.3 bits (1832), Expect = 8.4e-201
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA
Sbjct: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT
Sbjct: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT
Sbjct: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 355

[Close]

BLAST of Carg00969 vs. NCBI nr
Match: XP_022953103.1 (transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 693.3 bits (1788), Expect = 1.1e-195
Identity = 346/355 (97.46%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARN MKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA
Sbjct: 1   MSDGARNIMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLA SGSVKNI
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLAKSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNR+AIPSFLQIGETPPG HIADWLPAFPDAHTYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRKAIPSFLQIGETPPGTHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP EPCAEKMEM+RQRRKAEKSMSGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSEPCAEKMEMARQRRKAEKSMSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLET+
Sbjct: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 355

[Close]

BLAST of Carg00969 vs. NCBI nr
Match: KAG6596483.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 691.8 bits (1784), Expect = 3.1e-195
Identity = 346/355 (97.46%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA
Sbjct: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNR+AIPSFLQI ETPPG HIADWLPAFPDAHTYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRKAIPSFLQIVETPPGTHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP E CAEKMEM+RQRRKAEKSMSGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSELCAEKMEMARQRRKAEKSMSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLET+
Sbjct: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 355

[Close]

BLAST of Carg00969 vs. NCBI nr
Match: XP_023540161.1 (transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 691.0 bits (1782), Expect = 5.2e-195
Identity = 343/355 (96.62%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGF RFKESALDALVDIA
Sbjct: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFHRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAA YANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI
Sbjct: 61  IKYLRHLGKIAALYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNR+AIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRKAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP EPCAEKMEM+RQRRKAEKS+SGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSEPCAEKMEMARQRRKAEKSVSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDG+AMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLET+
Sbjct: 241 CLQEMEDGTAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHS+ENSHEELN S
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSQENSHEELNQS 355

[Close]

BLAST of Carg00969 vs. NCBI nr
Match: XP_022953779.1 (transcription initiation factor TFIID subunit 8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 647.5 bits (1669), Expect = 6.7e-182
Identity = 329/355 (92.68%), Postives = 334/355 (94.08%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARN MKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA
Sbjct: 1   MSDGARNIMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLA SGSVKNI
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLAKSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNR+AIPSFLQIGETPPG HIADWLPAFPDAHTYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRKAIPSFLQIGETPPGTHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP EPCAEKMEM+RQRRKAEKSMSGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSEPCAEKMEMARQRRKAEKSMSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDGSAMDGISHLSVPEVVAPAIEAING                 RPPVRFKLET+
Sbjct: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAING-----------------RPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 338

[Close]

BLAST of Carg00969 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-56
Identity = 136/356 (38.20%), Postives = 203/356 (57.02%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFGREVSRIAVAQICNSAGFQRFKESALDALVDIAIK 66
           N  +++E   +D+    G     EF    ++ AVAQ+C S G++ FK+ AL++L   A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNIVR 126
           Y+  LGK A  +ANL GR +CNVFDII  L++L  + G Q        L  S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVEEIPFAHPLPCFPVI---RNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPS 186
           +VNS EE+PF+ PLP FPV    R+R+ IPSF++IGETPPGKHI  WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 TLWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARN------GNGEIELTGGE 246
            +W     +P  +K+E +RQRRKAE+++  LQ++L+   S+RN         + E+   E
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 241

Query: 247 SNPFLGTCLQEMEDGSAMDGISH--LSVPEVVAPAIEAINGCGLAKNEDDKARILPIERP 306
           S       L+ +  G  ++ ++   LSV E  APA+EA      ++   +  +     +P
Sbjct: 242 SE------LRSVSSGEKVESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKK----NKP 301

Query: 307 PVRFKLETTKTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEEN 348
               KL T K FL    +L+ +M G    + +VR +D RD+K+RR E+I R   EN
Sbjct: 302 VALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED-RDDKRRRAEFILRQCMEN 346

[Close]

BLAST of Carg00969 vs. ExPASy Swiss-Prot
Match: Q5VWG9 (Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.0e-08
Identity = 40/145 (27.59%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 27  FGREVSRIAVAQICNSAGFQRFKESALDALVDIAIKYLRHLGKIAAFYANLAGRIECNVF 86
           + R + R++VAQIC + G+   + SA   L D+  +YL+ LG+    Y+ L GR +  + 
Sbjct: 5   YSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPILD 64

Query: 87  DIIRGLEELESSQGFQEAWEPIQCLANSGSVKNIVRYVNSVEEIPFAHPLPCFPVIRNRR 146
           D+          + FQ             S+  +  Y++++E + F H +P FPV +N  
Sbjct: 65  DV---------GEAFQ---------LMGVSLHELEDYIHNIEPVTFPHQIPSFPVSKNN- 124

Query: 147 AIPSFLQIGETPP---GKHIADWLP 169
            +  F Q G        ++I D+LP
Sbjct: 125 -VLQFPQPGSKDAEERKEYIPDYLP 129

[Close]

BLAST of Carg00969 vs. ExPASy Swiss-Prot
Match: Q5F489 (Transcription initiation factor TFIID subunit 3 OS=Gallus gallus OX=9031 GN=TAF3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 38/145 (26.21%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 27  FGREVSRIAVAQICNSAGFQRFKESALDALVDIAIKYLRHLGKIAAFYANLAGRIECNVF 86
           + R + R++VAQIC + G+   + SA D L D+  +YL+ LG+    Y  L GR +  + 
Sbjct: 5   YSRWLLRVSVAQICQALGWDSVQVSACDLLTDVLQRYLQGLGRGCHRYCELYGRTDPILD 64

Query: 87  DIIRGLEELESSQGFQEAWEPIQCLANSGSVKNIVRYVNSVEEIPFAHPLPCFPVIRNRR 146
           D+    + +                    ++  +  Y++++E + FAH +P FPV +N  
Sbjct: 65  DVGDAFKLM------------------GVNLHELEDYIHNIEPVTFAHQIPSFPVSKNN- 124

Query: 147 AIPSFLQIGETPP---GKHIADWLP 169
            +  F Q G        ++I D++P
Sbjct: 125 -VLQFPQPGSKDAEERKEYIPDYMP 129

[Close]

BLAST of Carg00969 vs. ExPASy Swiss-Prot
Match: Q5HZG4 (Transcription initiation factor TFIID subunit 3 OS=Mus musculus OX=10090 GN=Taf3 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 39/145 (26.90%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 27  FGREVSRIAVAQICNSAGFQRFKESALDALVDIAIKYLRHLGKIAAFYANLAGRIECNVF 86
           + R + R++VAQIC + G+   + SA   L D+  +YL+ LG+    Y+ L GR +  + 
Sbjct: 5   YSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPILD 64

Query: 87  DIIRGLEELESSQGFQEAWEPIQCLANSGSVKNIVRYVNSVEEIPFAHPLPCFPVIRNRR 146
           D+          + FQ             ++  +  Y++++E + F H +P FPV +N  
Sbjct: 65  DV---------GEAFQ---------LMGVNLHELEDYIHNIEPVTFPHQIPSFPVSKNN- 124

Query: 147 AIPSFLQIGETPPGK---HIADWLP 169
            +  F Q G     +   +I D+LP
Sbjct: 125 -VLQFPQPGSKDAEERKDYIPDYLP 129

[Close]

BLAST of Carg00969 vs. ExPASy Swiss-Prot
Match: Q9P6P0 (Transcription initiation factor TFIID subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=taf3 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 37/135 (27.41%), Postives = 56/135 (41.48%), Query Frame = 0


Query: 33  RIAVAQICNSAGFQRFKESALDALVDIAIKYLRHLGKIAAFYANLAGRIECNVFDIIRGL 92
           RI  +Q   +AG  R K S L++  DI I+Y+R L + A   A +  R  C++ D+   +
Sbjct: 15  RIFCSQTLRAAGIDRTKVSLLNSFTDITIRYIRLLSETAMAKAEVGRRSCCDLGDLRLAM 74

Query: 93  EELESSQGFQEAWEPIQCLANSGSVKNIVRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFL 152
           EE+    G +E             VK +V + N              P +   R +  F+
Sbjct: 75  EEIGLLNGSEE------------DVKTLVEWFNG-------------PQVAELRRVSGFV 122

Query: 153 QIGETPPGKHIADWL 168
           Q  ET       DWL
Sbjct: 135 QDSETQVKP--KDWL 122

[Close]

BLAST of Carg00969 vs. ExPASy TrEMBL
Match: A0A6J1GMG0 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111455334 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 5.1e-196
Identity = 346/355 (97.46%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARN MKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA
Sbjct: 1   MSDGARNIMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLA SGSVKNI
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLAKSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNR+AIPSFLQIGETPPG HIADWLPAFPDAHTYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRKAIPSFLQIGETPPGTHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP EPCAEKMEM+RQRRKAEKSMSGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSEPCAEKMEMARQRRKAEKSMSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLET+
Sbjct: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 355

[Close]

BLAST of Carg00969 vs. ExPASy TrEMBL
Match: A0A6J1GQQ1 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111455334 PE=3 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 3.2e-182
Identity = 329/355 (92.68%), Postives = 334/355 (94.08%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARN MKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA
Sbjct: 1   MSDGARNIMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLA SGSVKNI
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLAKSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNR+AIPSFLQIGETPPG HIADWLPAFPDAHTYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRKAIPSFLQIGETPPGTHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP EPCAEKMEM+RQRRKAEKSMSGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSEPCAEKMEMARQRRKAEKSMSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDGSAMDGISHLSVPEVVAPAIEAING                 RPPVRFKLET+
Sbjct: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAING-----------------RPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 338

[Close]

BLAST of Carg00969 vs. ExPASy TrEMBL
Match: A0A6J1GRA3 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111455334 PE=3 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.2e-174
Identity = 318/355 (89.58%), Postives = 323/355 (90.99%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARN MKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA
Sbjct: 1   MSDGARNIMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLA SG     
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLAKSG----- 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
                                  NR+AIPSFLQIGETPPG HIADWLPAFPDAHTYDPST
Sbjct: 121 -----------------------NRKAIPSFLQIGETPPGTHIADWLPAFPDAHTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP EPCAEKMEM+RQRRKAEKSMSGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSEPCAEKMEMARQRRKAEKSMSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
           CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLET+
Sbjct: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 327

[Close]

BLAST of Carg00969 vs. ExPASy TrEMBL
Match: A0A6J1KY58 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111498627 PE=3 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 1.0e-172
Identity = 317/355 (89.30%), Postives = 327/355 (92.11%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFK SALDALVDIA
Sbjct: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKGSALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIR LEELESSQGFQEAWEPIQCLANSGSVKNI
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRALEELESSQGFQEAWEPIQCLANSGSVKNI 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
           VRYVNSVEEIPFAHPLPCFPVIRNR+AIPSFLQIGE+PPGKHIA+WLPAFPDA TYDPST
Sbjct: 121 VRYVNSVEEIPFAHPLPCFPVIRNRKAIPSFLQIGESPPGKHIANWLPAFPDARTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP E CAEKME+SRQ RKAEKS+SGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSELCAEKMEVSRQGRKAEKSVSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
            LQEMEDG+AMDGIS LSVPEVVAPAIEA NG                 RPPVRFKLET+
Sbjct: 241 RLQEMEDGTAMDGISRLSVPEVVAPAIEATNG-----------------RPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFW+RRDDERDEKKRRVEYIPRHS ENSHEELN S
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWIRRDDERDEKKRRVEYIPRHS-ENSHEELNQS 337

[Close]

BLAST of Carg00969 vs. ExPASy TrEMBL
Match: A0A6J1KVR9 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111498627 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.5e-150
Identity = 289/355 (81.41%), Postives = 299/355 (84.23%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIA 60
           MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFK SALDALVDIA
Sbjct: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKGSALDALVDIA 60

Query: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNI 120
           IKYLRHLGKIAAFYANLAGRIECNVFDIIR LEELESSQGFQEAWEPIQCLANSG     
Sbjct: 61  IKYLRHLGKIAAFYANLAGRIECNVFDIIRALEELESSQGFQEAWEPIQCLANSG----- 120

Query: 121 VRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPST 180
                                  NR+AIPSFLQIGE+PPGKHIA+WLPAFPDA TYDPST
Sbjct: 121 -----------------------NRKAIPSFLQIGESPPGKHIANWLPAFPDARTYDPST 180

Query: 181 LWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGEIELTGGESNPFLGT 240
           LWRRSP E CAEKME+SRQ RKAEKS+SGLQKRL+SCGSARNGNGEIEL+GGESNPFLGT
Sbjct: 181 LWRRSPSELCAEKMEVSRQGRKAEKSVSGLQKRLVSCGSARNGNGEIELSGGESNPFLGT 240

Query: 241 CLQEMEDGSAMDGISHLSVPEVVAPAIEAINGCGLAKNEDDKARILPIERPPVRFKLETT 300
            LQEMEDG+AMDGIS LSVPEVVAPAIEA NG                 RPPVRFKLET+
Sbjct: 241 RLQEMEDGTAMDGISRLSVPEVVAPAIEATNG-----------------RPPVRFKLETS 300

Query: 301 KTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEENSHEELNLS 356
           KTFLRGSRNLNAKMAGNRESVFW+RRDDERDEKKRRVEYIPRHS ENSHEELN S
Sbjct: 301 KTFLRGSRNLNAKMAGNRESVFWIRRDDERDEKKRRVEYIPRHS-ENSHEELNQS 309

[Close]

BLAST of Carg00969 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-57
Identity = 136/356 (38.20%), Postives = 203/356 (57.02%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFGREVSRIAVAQICNSAGFQRFKESALDALVDIAIK 66
           N  +++E   +D+    G     EF    ++ AVAQ+C S G++ FK+ AL++L   A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWEPIQCLANSGSVKNIVR 126
           Y+  LGK A  +ANL GR +CNVFDII  L++L  + G Q        L  S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVEEIPFAHPLPCFPVI---RNRRAIPSFLQIGETPPGKHIADWLPAFPDAHTYDPS 186
           +VNS EE+PF+ PLP FPV    R+R+ IPSF++IGETPPGKHI  WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 TLWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARN------GNGEIELTGGE 246
            +W     +P  +K+E +RQRRKAE+++  LQ++L+   S+RN         + E+   E
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 241

Query: 247 SNPFLGTCLQEMEDGSAMDGISH--LSVPEVVAPAIEAINGCGLAKNEDDKARILPIERP 306
           S       L+ +  G  ++ ++   LSV E  APA+EA      ++   +  +     +P
Sbjct: 242 SE------LRSVSSGEKVESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKK----NKP 301

Query: 307 PVRFKLETTKTFLRGSRNLNAKMAGNRESVFWVRRDDERDEKKRRVEYIPRHSEEN 348
               KL T K FL    +L+ +M G    + +VR +D RD+K+RR E+I R   EN
Sbjct: 302 VALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED-RDDKRRRAEFILRQCMEN 346

[Close]

BLAST of Carg00969 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 158.7 bits (400), Expect = 8.7e-39
Identity = 121/373 (32.44%), Postives = 176/373 (47.18%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSA---------------GF 60
           ++ G     + +E Q   S   RGN+F   ++R+A AQIC S                 F
Sbjct: 2   INGGGEGGSQRRELQGKRSMS-RGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 61

Query: 61  QRFKESALDALVDIAIKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAW 120
             F+E+AL+ L D+ I+Y++++GK A FY N+AGR+E N  DI++ LE+L S  GF  A 
Sbjct: 62  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 121

Query: 121 EPIQCLANSGSVKNIVRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIAD 180
           +   CLA+SG VK+I+RY    EEIPF + LP FP  R +R  PSF  IG  PP +HI  
Sbjct: 122 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 181

Query: 181 WLPAFPDAHTYDPSTLWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQK-----RLLSCGSA 240
           WLPAFP+       T       E   +K+E   Q R    S+  +Q+     RL    S 
Sbjct: 182 WLPAFPE-------TKMSNGSEEINVDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSM 241

Query: 241 RNGNGEIELTGGESNPFLGTCLQEMEDGSAM-----------DGISHLSVPE---VVAPA 300
              + +  +   E NPFL   +   E   ++           + IS   +PE    ++  
Sbjct: 242 DQKDVQKPIEEPEGNPFLAAPIWVGEKNVSLSRVVCPSELRKEEISTNHLPEKHMSMSHH 301

Query: 301 IEAINGCGLAKNEDDKARILPIERPPVRFKLETTKTFLR---GSRNLNAKMAGNR--ESV 335
           I A+    L+   +DK R+  +E    R    T    LR   G+R  +     N+  E  
Sbjct: 302 IPALEAYALSDKINDKNRLAGMEDEQKRDGARTQGALLRFKIGTRKASECWKINQCLEEK 361

[Close]

BLAST of Carg00969 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 155.6 bits (392), Expect = 7.4e-38
Identity = 114/375 (30.40%), Postives = 175/375 (46.67%), Query Frame = 0


Query: 1   MSDGARNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNS--------------AGFQ 60
           M++G       + +     +  RGN+F   ++R+AVAQIC S                F 
Sbjct: 17  MNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFS 76

Query: 61  RFKESALDALVDIAIKYLRHLGKIAAFYANLAGRIECNVFDIIRGLEELESSQGFQEAWE 120
            F+ESALD L D+A++Y++ +GK A  YANLAGR++ N  DI++ LE+L S  GF    +
Sbjct: 77  SFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSD 136

Query: 121 PIQCLANSGSVKNIVRYVNSVEEIPFAHPLPCFPVIRNRRAIPSFLQIGETPPGKHIADW 180
              CLA+SG VK+I+RY    EEIPF + LP FP  + ++  PSF ++G  PP +HI  W
Sbjct: 137 TDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVW 196

Query: 181 LPAFPDAHTYDPSTLWRRSPGEPCAEKMEMSRQRRKAEKSMSGLQKRLLSCGSARNGNGE 240
           LPAFP+    D S     +  E      E        + S  G  +  L    +    GE
Sbjct: 197 LPAFPETELCDRSEETNAATIEGEIPSKENGSSLPSMQLSFDGGGR--LEIHKSSKDVGE 256

Query: 241 IELTGGESNPFLGTCLQEMEDGSA----------------------MDGISHLSVPEVVA 300
                 E N FL   L+ +E   +                      +    H+ + E  A
Sbjct: 257 STEAVVEGNLFLTAPLRFVEKNVSPVVRPLELSNEVVRTNHVPDKHVRNNHHIPILEASA 316

Query: 301 PAIEAINGCGLAKNED-DKARILPIERPPVRFKLETTKTFLRGSRNLNAKMAGNRESVFW 339
           P+ +  N   LA ++D +K  +   E   VRFK+ TTK  +  ++N + +  G      W
Sbjct: 317 PSDKINNKNWLAISKDVEKVDVARKELTLVRFKIGTTKRSMCLAKNRSFQEEG------W 376

[Close]

BLAST of Carg00969 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 90.5 bits (223), Expect = 2.9e-18
Identity = 59/180 (32.78%), Postives = 90/180 (50.00%), Query Frame = 0


Query: 6   RNNMKSKEQQSSDSRKCRGNEFGREVSRIAVAQICNSAGFQRFKESALDALVDIAIKYLR 65
           R N K K +++SD       EF   +++IAV+QIC S G++    SAL+ L     K+L+
Sbjct: 5   RRNSKLKFEETSDQSPTSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQ 64

Query: 66  HLGKIAAFYANLAGRIECNVFDIIRGLEELESSQ------GFQEAWEPIQCLANSGSVKN 125
            L ++A+ ++N A R E N+FDI+ GL+++  S       G        QCL  S  ++N
Sbjct: 65  SLAELASSFSNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRN 124

Query: 126 IVRYVNSVEEIPFAHPLP------CFPVIRNRRAIPSFLQIGETPPGKHIADWLPAFPDA 174
           +  +V    EIPFA PLP       F    +  A+   + +   P       WLP FPD+
Sbjct: 125 LSDFVTYAPEIPFAKPLPRRERDGSFGGDLDHVAVTRSVDVTSVPA------WLPPFPDS 178

The following BLAST results are available for this feature:

BLAST of Carg00969 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028031.1	8.4e-201	100.00	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
XP_022953103.1	1.1e-195	97.46	transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita mosch...	[more]
KAG6596483.1	3.1e-195	97.46	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]
XP_023540161.1	5.2e-195	96.62	transcription initiation factor TFIID subunit 8-like isoform X1 [Cucurbita pepo ...	[more]
XP_022953779.1	6.7e-182	92.68	transcription initiation factor TFIID subunit 8-like isoform X2 [Cucurbita mosch...	[more]

BLAST of Carg00969 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	2.6e-56	38.20	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5VWG9	6.0e-08	27.59	Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 ...	[more]
Q5F489	1.3e-07	26.21	Transcription initiation factor TFIID subunit 3 OS=Gallus gallus OX=9031 GN=TAF3...	[more]
Q5HZG4	1.3e-07	26.90	Transcription initiation factor TFIID subunit 3 OS=Mus musculus OX=10090 GN=Taf3...	[more]
Q9P6P0	2.3e-04	27.41	Transcription initiation factor TFIID subunit 3 OS=Schizosaccharomyces pombe (st...	[more]

BLAST of Carg00969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMG0	5.1e-196	97.46	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQQ1	3.2e-182	92.68	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GRA3	7.2e-174	89.58	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KY58	1.0e-172	89.30	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KVR9	1.5e-150	81.41	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg00969 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	1.9e-57	38.20	TBP-associated factor 8	[more]
AT5G15570.1	8.7e-39	32.44	Bromodomain transcription factor	[more]
AT3G02160.1	7.4e-38	30.40	Bromodomain transcription factor	[more]
AT1G31240.1	2.9e-18	32.78	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR46338:SF1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..350
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 25..101 e-value: 6.6E-26 score: 102.1
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 26..95 e-value: 2.3E-20 score: 72.4
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 23..107 e-value: 4.6E-20 score: 73.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 36..90
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 162..210 e-value: 9.9E-11 score: 42.0
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 162..214 e-value: 9.44551E-13 score: 60.3643
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00969-RA	Carg00969-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity