Carg00960 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00960
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB114-like
Location	Carg_Chr06: 1907966 .. 1909012 (+)
RNA-Seq Expression	Carg00960
Synteny	Carg00960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTGATCCACCTTGGATTTTCTGGTCACCTTCCCTTTTCATTCCAAAACAAATGTTCTTCCCTGCACTTTTTCCACTATTTTTCCTCTATAAATTCAACTAAAGAGCTTTGAGTCATGATCAGAAATGGCTACTCATTCAGCCCTTCAAACTGAGATACAGCGTAGAGGACCTTGGCTCGAACAGGAAGACAGGCAGCTCACCATGTTTGTAACTCGCATGGGAGAGAGAAAGTGGGACTCGATCGCCAAAGCTTCAGGTATGACTGTTAACTTTTTTCTATCGTAATAGTATGATATTGTCGACTTTGTAAAGTGCCATGTCAAGACTTGTTTATATGTTGGTATCTGAACATTGCAGGGCTTGAGAGAAGTGGGAAGAGCTGTAGATTCAGATGGCTTAACTATCTCCGCCCTAGTCTTAAACGTGATCGCATAAACAGTGAGGAAGAAGAAATCATTCTGAAACTTCATAAGAAATGGGGTAACAAGTATGAACTAAAATAACATCTGGGTGCTAGAAATTTTGCAACTTTATTGCTCTATGATCGTCATTATTCAAATATATCTTGTTTTAGATGGTCGAGAATCGCACGATGGCTTCCAGGAAGAACTGATAACGAGATCAAGAACTACTGGAGAAGCCACTTGAGGAAAAAGTTCCCCATTCAACTAGAAGGTTCATGGAAAAATCTACGTTCGTTCTTGATATATTCAATTGCTTTAACTAGTTTCTTTTACAGACTGCAAAGTAAAACATGAGAAACAAGAGAAGCTCTCATTGAGGCATGACCAAAATGAAAGGGACGTTCCCTTATACAATCATTTCGAGTTGTCGAACCTCGAGATCACAAGTTCGCCATACGAAACTCGATTATCAAACTGGATATCGAATCAATTAATGAACGAGAAGCAGGAAGTGAATCATCATGAAGAGTGCAACAACTCAGAATTCTGTTTTTACTATCCAAATATGAACTATGCACGTAGAGATGATCAATCGGACCATTTCTGGGATTCACTCACTCCTCTTTGGGATATCGAGTAG

mRNA sequence

TATTGATCCACCTTGGATTTTCTGGTCACCTTCCCTTTTCATTCCAAAACAAATGTTCTTCCCTGCACTTTTTCCACTATTTTTCCTCTATAAATTCAACTAAAGAGCTTTGAGTCATGATCAGAAATGGCTACTCATTCAGCCCTTCAAACTGAGATACAGCGTAGAGGACCTTGGCTCGAACAGGAAGACAGGCAGCTCACCATGTTTGTAACTCGCATGGGAGAGAGAAAGTGGGACTCGATCGCCAAAGCTTCAGGGCTTGAGAGAAGTGGGAAGAGCTGTAGATTCAGATGGCTTAACTATCTCCGCCCTAGTCTTAAACGTGATCGCATAAACAGTGAGGAAGAAGAAATCATTCTGAAACTTCATAAGAAATGGGGTAACAAATGGTCGAGAATCGCACGATGGCTTCCAGGAAGAACTGATAACGAGATCAAGAACTACTGGAGAAGCCACTTGAGGAAAAAGTTCCCCATTCAACTAGAAGGTTCATGGAAAAATCTACGTTCGTTCTTGATATATTCAATTGCTTTAACTAACTGCAAAGTAAAACATGAGAAACAAGAGAAGCTCTCATTGAGGCATGACCAAAATGAAAGGGACGTTCCCTTATACAATCATTTCGAGTTGTCGAACCTCGAGATCACAAGTTCGCCATACGAAACTCGATTATCAAACTGGATATCGAATCAATTAATGAACGAGAAGCAGGAAGTGAATCATCATGAAGAGTGCAACAACTCAGAATTCTGTTTTTACTATCCAAATATGAACTATGCACGTAGAGATGATCAATCGGACCATTTCTGGGATTCACTCACTCCTCTTTGGGATATCGAGTAG

Coding sequence (CDS)

ATGGCTACTCATTCAGCCCTTCAAACTGAGATACAGCGTAGAGGACCTTGGCTCGAACAGGAAGACAGGCAGCTCACCATGTTTGTAACTCGCATGGGAGAGAGAAAGTGGGACTCGATCGCCAAAGCTTCAGGGCTTGAGAGAAGTGGGAAGAGCTGTAGATTCAGATGGCTTAACTATCTCCGCCCTAGTCTTAAACGTGATCGCATAAACAGTGAGGAAGAAGAAATCATTCTGAAACTTCATAAGAAATGGGGTAACAAATGGTCGAGAATCGCACGATGGCTTCCAGGAAGAACTGATAACGAGATCAAGAACTACTGGAGAAGCCACTTGAGGAAAAAGTTCCCCATTCAACTAGAAGGTTCATGGAAAAATCTACGTTCGTTCTTGATATATTCAATTGCTTTAACTAACTGCAAAGTAAAACATGAGAAACAAGAGAAGCTCTCATTGAGGCATGACCAAAATGAAAGGGACGTTCCCTTATACAATCATTTCGAGTTGTCGAACCTCGAGATCACAAGTTCGCCATACGAAACTCGATTATCAAACTGGATATCGAATCAATTAATGAACGAGAAGCAGGAAGTGAATCATCATGAAGAGTGCAACAACTCAGAATTCTGTTTTTACTATCCAAATATGAACTATGCACGTAGAGATGATCAATCGGACCATTTCTGGGATTCACTCACTCCTCTTTGGGATATCGAGTAG

Protein sequence

MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQLEGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYETRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE

Homology

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BLAST of Carg00960 vs. NCBI nr
Match: KAG7028040.1 (Transcription factor MYB27 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.8 bits (1296), Expect = 8.0e-139
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE
Sbjct: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
           TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE
Sbjct: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 239

[Close]

BLAST of Carg00960 vs. NCBI nr
Match: XP_022936978.1 (transcription factor MYB27-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-127
Identity = 224/239 (93.72%), Postives = 225/239 (94.14%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           EGSWKNL           +CKVKH K EKLSLRHDQNERDVPLYNHFELSNLEITSSPYE
Sbjct: 121 EGSWKNL-----------HCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
           TRLSNWISN LMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE
Sbjct: 181 TRLSNWISNPLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 228

[Close]

BLAST of Carg00960 vs. NCBI nr
Match: XP_022936985.1 (transcription factor MYB27-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 449.9 bits (1156), Expect = 1.4e-122
Identity = 218/239 (91.21%), Postives = 219/239 (91.63%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           E                 +CKVKH K EKLSLRHDQNERDVPLYNHFELSNLEITSSPYE
Sbjct: 121 E-----------------DCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
           TRLSNWISN LMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE
Sbjct: 181 TRLSNWISNPLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 222

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BLAST of Carg00960 vs. NCBI nr
Match: KAG6596493.1 (Transcription factor MYB27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446.8 bits (1148), Expect = 1.2e-121
Identity = 217/239 (90.79%), Postives = 218/239 (91.21%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           E                 +CKVKH KQ K SL HDQNERDVPLYNHFELSNLEITSSPYE
Sbjct: 121 E----------------EDCKVKHGKQYKPSLSHDQNERDVPLYNHFELSNLEITSSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
           TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE
Sbjct: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 223

[Close]

BLAST of Carg00960 vs. NCBI nr
Match: XP_023540998.1 (transcription factor MYB27-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.7 bits (1101), Expect = 3.3e-116
Identity = 206/239 (86.19%), Postives = 219/239 (91.63%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALQ  +QRRGPWL++EDR+LTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQA-VQRRGPWLQEEDRRLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRP+LKRDRINS+EEEII+KLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPNLKRDRINSKEEEIIMKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           EGSWK+L           +CKVKH KQ+KLSLRHDQNERDVPLYNHFELSNLEIT+SPYE
Sbjct: 121 EGSWKSL-----------DCKVKHGKQDKLSLRHDQNERDVPLYNHFELSNLEITNSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
            RLSNWISNQL+NEKQEVNHHEECNN EFCFY PNMNYA RDDQ+DHFWDS T LWDIE
Sbjct: 181 IRLSNWISNQLINEKQEVNHHEECNNLEFCFYSPNMNYAHRDDQTDHFWDSFT-LWDIE 226

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BLAST of Carg00960 vs. ExPASy Swiss-Prot
Match: Q9SCP1 (Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.0e-40
Identity = 95/211 (45.02%), Postives = 129/211 (61.14%), Query Frame = 0


Query: 10  EIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLKRDR 69
           E  RRGPWLE+ED +L   ++ +GER+WDS+A  SGL+RSGKSCR RW+NYL P+LKR  
Sbjct: 7   ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKRGP 66

Query: 70  INSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQLEG---SWK- 129
           ++ EEE II +LH  WGNKWS+IAR LPGRTDNEIKNYWR+H RKK   Q  G    W+ 
Sbjct: 67  MSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGKLFEWRG 126

Query: 130 NLRSFLIY---SIALTNCKV---KHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPY 189
           N    L++      +T  K    +H   E +S+   +              +  +  SPY
Sbjct: 127 NTGEELLHKYKETEITRTKTTSQEHGFVEVVSMESGKEANG----GVGGRESFGVMKSPY 186

Query: 190 ETRLSNWISNQLMNEKQEVNHHEECNNSEFC 211
           E R+S+WIS ++  ++ E N  E+ ++S  C
Sbjct: 187 ENRISDWIS-EISTDQSEANLSED-HSSNSC 211

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BLAST of Carg00960 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0


Query: 7   LQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLK 66
           +Q E  R+GPW EQED  L  FV   G+R+WD IAK SGL R+GKSCR RW+NYL P LK
Sbjct: 2   MQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 61

Query: 67  RDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKF-----PIQLE 126
           R ++  +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK      P+   
Sbjct: 62  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPT 121

Query: 127 GSWKNLRS 130
            S+ N  S
Sbjct: 122 SSFSNCSS 129

[Close]

BLAST of Carg00960 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 71/103 (68.93%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 13  RRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLKRDRINS 72
           R+GPW EQED QL   V   GER+WD IAK SGL R+GKSCR RW+NYL P LKR R++ 
Sbjct: 9   RKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSP 68

Query: 73  EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
            EE +IL+LH +WGN+WSRIAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 69  HEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of Carg00960 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37
Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 7   LQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLK 66
           L  E  R+GPW EQED  L  FV   G+R+WD +AK SGL R+GKSCR RW+NYL P LK
Sbjct: 3   LVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLK 62

Query: 67  RDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
           R ++  +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 63  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of Carg00960 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 68/106 (64.15%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 10  EIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLKRDR 69
           E  R+GPW EQED QL   V   G+R+WD +AK SGL R+GKSCR RW+NYL P LK  R
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 70  INSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
           ++ +EE +I++LH +WGN+WSRIAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of Carg00960 vs. ExPASy TrEMBL
Match: A0A6J1FER8 (transcription factor MYB27-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443404 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 8.9e-128
Identity = 224/239 (93.72%), Postives = 225/239 (94.14%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           EGSWKNL           +CKVKH K EKLSLRHDQNERDVPLYNHFELSNLEITSSPYE
Sbjct: 121 EGSWKNL-----------HCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
           TRLSNWISN LMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE
Sbjct: 181 TRLSNWISNPLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 228

[Close]

BLAST of Carg00960 vs. ExPASy TrEMBL
Match: A0A6J1FF95 (transcription factor MYB27-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443404 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.6e-123
Identity = 218/239 (91.21%), Postives = 219/239 (91.63%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           E                 +CKVKH K EKLSLRHDQNERDVPLYNHFELSNLEITSSPYE
Sbjct: 121 E-----------------DCKVKHGKPEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
           TRLSNWISN LMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE
Sbjct: 181 TRLSNWISNPLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 222

[Close]

BLAST of Carg00960 vs. ExPASy TrEMBL
Match: A0A6J1KW53 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111498725 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.3e-112
Identity = 201/239 (84.10%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MATHSAL TEIQRRGPWLE EDRQLTMFV RMGERKWDSIAKASGLERSGKSCRFRWLNY
Sbjct: 1   MATHSALHTEIQRRGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRP+LK DRI+ EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPI L
Sbjct: 61  LRPNLKCDRISIEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIHL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPYE 180
           E                  CKVKH KQ+KLSLRHDQNERDVP YNHF LSNLEITSSPYE
Sbjct: 121 EA-----------------CKVKHGKQDKLSLRHDQNERDVPSYNHFGLSNLEITSSPYE 180

Query: 181 TRLSNWISNQLMNEKQEVNHHEECNNSEFCFYYPNMNYARRDDQSDHFWDSLTPLWDIE 240
            RLSNWISNQLMNEKQEVNHHE CN+ EFCFYYPNMNYA R DQ DHFWDS TPLWDIE
Sbjct: 181 IRLSNWISNQLMNEKQEVNHHEVCNSLEFCFYYPNMNYAHRVDQIDHFWDSFTPLWDIE 222

[Close]

BLAST of Carg00960 vs. ExPASy TrEMBL
Match: A0A5D3DPF8 (Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002860 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 182/257 (70.82%), Postives = 200/257 (77.82%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MA  SALQTE  RRGPWLE EDRQLT+FVTRMGERKWD IAKASGLERSGKSCRFRWLNY
Sbjct: 1   MANQSALQTERLRRGPWLEAEDRQLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRP+LKRDRINSEEEEIILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSL----------RHDQNER-DVPL----YN 180
           EG+                 KV+H KQ+K+SL          RHD NER D+P      N
Sbjct: 121 EGN-----------------KVEHGKQDKVSLKKCGLLGSPNRHDHNERKDIPFCNISCN 180

Query: 181 HFE--LSNLEITSSPYETRLSNWISNQLMNEKQEV-NHHEECNNSEFCFYYPNMNYARRD 240
           HF+   SN EITSSPYE R+SNWIS+QL N K EV +HHE+CN+ +FCF YPNMN+A RD
Sbjct: 181 HFDFGFSNFEITSSPYEIRVSNWISHQLTNGKPEVIDHHEDCNSLDFCFCYPNMNFAERD 240

[Close]

BLAST of Carg00960 vs. ExPASy TrEMBL
Match: A0A1S3B717 (transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103486512 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 182/257 (70.82%), Postives = 200/257 (77.82%), Query Frame = 0


Query: 1   MATHSALQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNY 60
           MA  SALQTE  RRGPWLE EDRQLT+FVTRMGERKWD IAKASGLERSGKSCRFRWLNY
Sbjct: 1   MANQSALQTERLRRGPWLEAEDRQLTIFVTRMGERKWDLIAKASGLERSGKSCRFRWLNY 60

Query: 61  LRPSLKRDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQL 120
           LRP+LKRDRINSEEEEIILKLHKKWGNKWSRIA+WLPGRTDNEIKNYWRSHLRKKFPIQL
Sbjct: 61  LRPNLKRDRINSEEEEIILKLHKKWGNKWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQL 120

Query: 121 EGSWKNLRSFLIYSIALTNCKVKHEKQEKLSL----------RHDQNER-DVPL----YN 180
           EG+                 KV+H KQ+K+SL          RHD NER D+P      N
Sbjct: 121 EGN-----------------KVEHGKQDKVSLKKCGLLGSPNRHDHNERKDIPFCNISCN 180

Query: 181 HFE--LSNLEITSSPYETRLSNWISNQLMNEKQEV-NHHEECNNSEFCFYYPNMNYARRD 240
           HF+   SN EITSSPYE R+SNWIS+QL N K EV +HHE+CN+ +FCF YPNMN+A RD
Sbjct: 181 HFDFGFSNFEITSSPYEIRVSNWISHQLTNGKPEVIDHHEDCNSLDFCFCYPNMNFAERD 240

[Close]

BLAST of Carg00960 vs. TAIR 10
Match: AT3G53200.1 (myb domain protein 27 )

HSP 1 Score: 166.4 bits (420), Expect = 2.8e-41
Identity = 95/211 (45.02%), Postives = 129/211 (61.14%), Query Frame = 0


Query: 10  EIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLKRDR 69
           E  RRGPWLE+ED +L   ++ +GER+WDS+A  SGL+RSGKSCR RW+NYL P+LKR  
Sbjct: 7   ETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKRGP 66

Query: 70  INSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKFPIQLEG---SWK- 129
           ++ EEE II +LH  WGNKWS+IAR LPGRTDNEIKNYWR+H RKK   Q  G    W+ 
Sbjct: 67  MSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGKLFEWRG 126

Query: 130 NLRSFLIY---SIALTNCKV---KHEKQEKLSLRHDQNERDVPLYNHFELSNLEITSSPY 189
           N    L++      +T  K    +H   E +S+   +              +  +  SPY
Sbjct: 127 NTGEELLHKYKETEITRTKTTSQEHGFVEVVSMESGKEANG----GVGGRESFGVMKSPY 186

Query: 190 ETRLSNWISNQLMNEKQEVNHHEECNNSEFC 211
           E R+S+WIS ++  ++ E N  E+ ++S  C
Sbjct: 187 ENRISDWIS-EISTDQSEANLSED-HSSNSC 211

[Close]

BLAST of Carg00960 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0


Query: 7   LQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLK 66
           +Q E  R+GPW EQED  L  FV   G+R+WD IAK SGL R+GKSCR RW+NYL P LK
Sbjct: 2   MQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 61

Query: 67  RDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKKF-----PIQLE 126
           R ++  +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK      P+   
Sbjct: 62  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPT 121

Query: 127 GSWKNLRS 130
            S+ N  S
Sbjct: 122 SSFSNCSS 129

[Close]

BLAST of Carg00960 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 7   LQTEIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLK 66
           L  E  R+GPW EQED  L  FV   G+R+WD +AK SGL R+GKSCR RW+NYL P LK
Sbjct: 3   LVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLK 62

Query: 67  RDRINSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
           R ++  +EE ++L+LH KWGN+WS+IAR LPGRTDNEIKNYWR+H+RKK
Sbjct: 63  RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111

[Close]

BLAST of Carg00960 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 153.3 bits (386), Expect = 2.5e-37
Identity = 67/106 (63.21%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 10  EIQRRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLKRDR 69
           E+ R+GPW  +EDR L  +V   GE +W+S++K +GL+R+GKSCR RW+NYLRP LKR +
Sbjct: 4   EVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRGQ 63

Query: 70  INSEEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRKK 116
           I   EE IIL+LH KWGN+WS IAR LPGRTDNEIKNYWR+H +KK
Sbjct: 64  ITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKK 109

[Close]

BLAST of Carg00960 vs. TAIR 10
Match: AT3G30210.1 (myb domain protein 121 )

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-37
Identity = 66/102 (64.71%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 13  RRGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYLRPSLKRDRINS 72
           R+GPW  +ED+ L  +VT  GE +W ++AK +GL RSGKSCR RW+NYLRP LKR +I  
Sbjct: 28  RKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKRGQITP 87

Query: 73  EEEEIILKLHKKWGNKWSRIARWLPGRTDNEIKNYWRSHLRK 115
           +EE IIL+LH  WGNKWS IAR+LPGRTDNEIKNYWR+H +K
Sbjct: 88  QEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKK 129

The following BLAST results are available for this feature:

BLAST of Carg00960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028040.1	8.0e-139	100.00	Transcription factor MYB27 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936978.1	1.8e-127	93.72	transcription factor MYB27-like isoform X1 [Cucurbita moschata]	[more]
XP_022936985.1	1.4e-122	91.21	transcription factor MYB27-like isoform X2 [Cucurbita moschata]	[more]
KAG6596493.1	1.2e-121	90.79	Transcription factor MYB27, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023540998.1	3.3e-116	86.19	transcription factor MYB27-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg00960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCP1	4.0e-40	45.02	Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1	[more]
Q9LX82	1.7e-38	57.81	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q4JL76	1.7e-38	68.93	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q4JL84	1.4e-37	63.30	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q53NK6	1.8e-37	64.15	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE...	[more]

BLAST of Carg00960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FER8	8.9e-128	93.72	transcription factor MYB27-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FF95	6.6e-123	91.21	transcription factor MYB27-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KW53	5.3e-112	84.10	transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111498725 PE=...	[more]
A0A5D3DPF8	1.1e-93	70.82	Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B717	1.1e-93	70.82	transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103486512 PE=4 SV...	[more]

BLAST of Carg00960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53200.1	2.8e-41	45.02	myb domain protein 27	[more]
AT3G46130.1	1.2e-39	57.81	myb domain protein 48	[more]
AT5G59780.3	1.0e-38	63.30	myb domain protein 59	[more]
AT4G13480.1	2.5e-37	63.21	myb domain protein 79	[more]
AT3G30210.1	5.5e-37	64.71	myb domain protein 121	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 1.3E-12 score: 57.8 coord: 13..63 e-value: 1.1E-11 score: 54.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 10.104196
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 10.591917
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 9.81429E-7 score: 42.5626
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 73..112 e-value: 4.95542E-9 score: 48.7258
None	No IPR available	GENE3D	1.10.10.60		coord: 14..66 e-value: 2.1E-16 score: 61.6
None	No IPR available	GENE3D	1.10.10.60		coord: 71..115 e-value: 9.2E-18 score: 65.9
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 2..238
None	No IPR available	PANTHER	PTHR10641:SF1230	MYB TRANSCRIPTION FACTOR	coord: 2..238
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 1.6E-12 score: 47.4 coord: 72..112 e-value: 1.9E-12 score: 47.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 23.145227
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 16.539316
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 13..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00960-RA	Carg00960-RA	mRNA