Carg00930 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00930
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	histone deacetylase HDT1
Location	Carg_Chr06: 2072870 .. 2077085 (-)
RNA-Seq Expression	Carg00930
Synteny	Carg00930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCTACCTGCAACTTCCCATTGATCTCTGTTCTTCTCCAATGGAGTTTTGGGGTAATTTCCTCTCTTCCCTTTTCTCCTTTGCTTCTTCATTGATTTTTTATTCTCTCTGCGCTTCTTCTTAATTGGCCAAGATCAACGGGTTTCATTTCATTTTTTGTAGTGATTTAGGTATTACGACTGTAGAAAAATAGTTGAAGAGTACATTTAGCTTAAGGAGTTGTTTTTGTTTTTGTTTTTATTCTTCCTTGGAAGCTTCTCGGTTTAGGCTACCTGTTTATGCACTGGAATTTTGCTATTTCTTAATTTTTAATGCTATCTTGGGAATAATTTGATTTGAACCGCTATTTTGTTTTATTAAGTTCGTCAATGTTTGAATTTGTGTGTATATGACGTGAATTTGAGCGTTGAGATACTGAAGGCAAAAGGCGCTTGAACGATTTTGGACTCGCTTCTCTTTTACGGAGATGTGATTATGGACATGGTTTGTTTGAAATTTGATGTGCATTGTTAATCTACATCGGTTCTGTTTAACGAGATAGGATTGCTTCATCTCAGTCTTTACGTTTTTGCTCTTTCTGGTTGTTTTATTTTCTTGTTTATGTGCGGCCTTTTTAGTCAGCTCCCTCCTTTTGGCTAATTAATGAGTTCCTACTTATTCATAGTGCGTAGAAGTTTTTTGAACTTATAGTTTAGGAAAAAATTAATTGGAGCTGCTATTGCTGGATGATTCCAAATTTTCGACAACATTTATTTGTAATTTATTGTCGCTAGTAACTATCTGGCTGGTGATGAAAGATCAAGATAACAGCTTCTGCTGGAAATGGAGAGTGGTTTTATATGTCATGTGCCTATTATTTCTTGGTGGATATGCTGGAGTTACTACAGATTCTCAGTTCTCTTACACGTCGATGTACCTAACTAAAAGCACATTGGTATATGCATATTCAGTTCTGTGCTGGCTCTATGTGTTTCCACGACTCAGTGCTATTGATATGTCGTGCAGGTGCTGAGGTTAAAGCTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAATATATTGCATCTGTCGCAGGTATCGTCTTTGAGCTAGTTTGTTTATATGTTGATGAGAAATCAGTTGGGCATTTGTTGAGTTATATAATTTCCGCAGGCATGCCTTGGAGAGTCCAAGAGCAAAGGAAGTGAACAGGTTTTTCTGTATGTCAAGGTCGGCAATCAAAAGCTTGTTCTGGGGACATTATCCTCAGAGAAATTCCCACAAGTTTCTTTTGATCTGGTGTTTGACAAAGACTTTGAGCTATCTCATAATTGGAAAAATGGAAGCGTCCACTTTACGGGATATTTATCCCTCCTTCCAGAAGAATATCCTTTCTCTGAGTTCCTAAATAATTTTAGTTTTTTTAATTTTCATTAAAAAGAATGTTTTGTAGTTTAATTGTTTACTTCGCACTTTCTTGTGTTTTTTCCTTGACTAGTTTGAGTTTTTCTCATTGCCACGGAGGAATCTTGTAAGTTATCTCTCAAAAAAGTCATTGTAACTTTATTTTTATTTCATTAAAATCAATGAATAAGCACTGGTTTGGTGTTTTCTTTTCCATTTTCAGATACTGATTCTGAAGAGGATCTTCCACAAGCTGTCATTGACAATGGTAATGTTTACTCTCTGATACTGGTTTGGGTATTTGTCATTTATATTTAATTACTTATGCTATAATACTTTGGTTGCAGGAAAACCAGAGCCACAGCCACAACCACAGCCTAAGAAAGATGAAAAGCCTGGTACTTCTGGAACGAAGAAAAAAGTGCAGATTGTAGAACCAAACAAAGGTGGCTCTATTGACACTAAGAAGAATGAAGACAGTTCTGACGAAGATGATGATGAGGATGAAGACAGCTCGGATGACGAGGTGCACTTATATGTCATTTTACTTCTTCGTGTGAATTTATTTAAAAAAAAAAAAAAAAGATTCATGATAAACAGGGTACAAAATTGATTAATTTAGCTCTCATTTTCATTCCATGTGAAACTCGAGAACGTTCCATGAAGATAGGTTTTCAAATCATTGATTAAAAGAATTTTGGCTATTCTGAAATAGTCTTAATATTTCCTTATTATTTCACTTAAAAAAATGCGGCTAATCCCCCCGCTTCAATTTATCCAGTATTTGATTACCTTATCATGTGCAGTAGTTTGAATCTTTTGATCTTTGTCCTGTACAATGGTCATACCCGATGGAGCATTGTCTCTTCCTGAGCTACTTGGATATTTGTTATTGTCTGAGGCATATAACGAAGATGGTATCTTAGGATTTACTCTACAAGAAATGAAAAGAGACTAATACTCAAAAGATACAAATTCCATAAATGAATGAAAGAAGAAAACGAAACAGAATCACAAAGGAAAAGTAAAAGCATCACAAAAGGTTTGAAAAGAGAACATCGCGAAGAAGACTTCTGGATTTTCAAATGGATACTAATATGGCCATTTAATTTCAACTTTCTTTATCATCTGTCCTGGTTTCATTCAGAATGCAAATGGAGGTGAAGAAGACGACAGTGATGATGAAAATGAATTTTCTGGGGATGACAGTGATGATGACGATGAAAATGAAGACTTGGATGACAGTATGGAAGAGGATGAGCAGACACCAAAAAAGGTTCAAGCCTGCTATCTTTCTCTAATTCTTAGAGAATCTCGATTGCTTCGAGCTAGGCATTCTTTTCTTTTATTTGCTATTTTTTTCAACCAAATAATTGTTGGAACCATTGAAGGCCGAAGCAAGCAAGAAGAGGCCTTTAGAGGCTGCTAATAAAGCGCCTGCTCCTGATAAGAAGACAAAACTCGTCACTCCCCAGAAAACTGGTTTGTTTCTTCTGACTTTTATGAACATGTTTTACATTCTGATTTCTTAGCCATTATATTGCTCTATGTGGAGTTGACCATTCGATCTTACCACATTCCTTTTCCATGTTATTGCATTGCAATTTCACAATCGTTCGTTTTTTTAATACTTAATTTAATGTTATTTTTTACGACAGATGGCAAGAAAGGCGTTCCTCATGTAGCTACTCCTCATCCTTCAAAACAGGCTGGGAAAATGCCTGCTGCTAGTGACCAAAATAAACAGCAGACTCCCAAATCAGCTAGTGGTGCATTCCCCTGCAAGTCTTGCAAGAGGTATCTCTTGCTACACGTGTTTTTCTAATTTCTTGGAGAATTGAATGGTTAAACTTTAGTCTAATTGTGGCAATAAACTTTACTGCAGGGCATTTGGCTCAGAAACTGCGTTACAATCCCACACAAAGGCTAAGCACAGTGCTGAGAAGTGACCAGGTTAATATTTCAGGAACAACGTGTTGGATTTGCTCAACCTGGCCAGTACGTTAGATCCGAACCACGATACTGGCTGGTTTTGAATTTTCTACCCCTCAACCCTTTCGAGGTTCATCTTCTAAATGTTCTGATGTGATTTCAAATGTTATTATTATCATAAGCTTTAATGTATGGACACTGGTTTTCCTGGTGATGGTTCGTTTTAGATATCGCATATGCTAGTCTTGACTTATGCTGTAGGTCTTTTTAGATTCAGTAATATATTATCTCTAATGTTACTTTACCTCGAGTTCGCTTAGCTTATTCTTCTGTCTTTTTTTGGCAACATTCGAAGAGAAGAATTAAGTAAGAAAGATGAAATTGCCTGTCAACTTCATCCTTGCTTTCAGATTGCTCTATTGCTTTACCTGTGGTGCTTGGAGACCCTTTGCTTGGATTAGTTGGTTTCTTGGACTAGCCCATGTTGTTGTGCAACTTTGCTCGTCGAATGCTGGCATGGCATGTTCTATCTTTGCTTGGATTAGAGGAGAGTAGAAATAAGCACTAGAAAGGCCAATGTTGGTGACGAGATCTGTGCGCATGTAAAACTTCTTTTTCTAATCTGTGGCGTGTTGGGATCGAAGGACATCGAAATGGTGGATGGAGGCCGTGGATATGACTTTTATGTTTGTGTCTAATAGATTCTTGAACTTAAAAGATTATCTAAAAATATTTGAAGCTTTCAATTTTATGTCTAGTAGTTCTTTATTACTCAAATGTCATGCAATGTAATCAATCTATTAGTGTGAGATCCCACATCAGTTGACAATGAGAACAAAACATTATTTATTAGGGTGTGAAAATTTTCTCCCTAGTATATGCGCTTTAAAAACTCG

mRNA sequence

AAAACCCTACCTGCAACTTCCCATTGATCTCTGTTCTTCTCCAATGGAGTTTTGGGGTAATTTCCTCTCTTCCCTTTTCTCCTTTGCTTCTTCATTGATTTTTTATTCTCTCTGCGCTTCTTCTTAATTGGCCAAGATCAACGGGTTTCATTTCATTTTTTGTAGTGATTTAGGTATTACGACTGTAGAAAAATAGTTGAAGAGTACATTTAGCTTAAGGAGTTGTTTTTGTTTTTGTTTTTATTCTTCCTTGGAAGCTTCTCGGTTTAGGCTACCTGTTTATGCACTGGAATTTTGCTATTTCTTAATTTTTAATGCTATCTTGGGAATAATTTGATTTGAACCGCTATTTTGTTTTATTAAGTTCGTCAATGTTTGAATTTGTGTGTATATGACGTGAATTTGAGCGTTGAGATACTGAAGGCAAAAGGCGCTTGAACGATTTTGGACTCGCTTCTCTTTTACGGAGATGTGATTATGGACATGGTTTGTTTGAAATTTGATGTGCATTGTTAATCTACATCGGTTCTGTTTAACGAGATAGGATTGCTTCATCTCAGTCTTTACGTTTTTGCTCTTTCTGGTTGTTTTATTTTCTTGTTTATGTGCGGCCTTTTTAGTCAGCTCCCTCCTTTTGGCTAATTAATGAGTTCCTACTTATTCATAGTGCGTAGAAGTTTTTTGAACTTATAGTTTAGGAAAAAATTAATTGGAGCTGCTATTGCTGGATGATTCCAAATTTTCGACAACATTTATTTGTAATTTATTGTCGCTAGTAACTATCTGGCTGGTGATGAAAGATCAAGATAACAGCTTCTGCTGGAAATGGAGAGTGGTTTTATATGTCATGTGCCTATTATTTCTTGGTGGATATGCTGGAGTTACTACAGATTCTCAGTTCTCTTACACGTCGATGTACCTAACTAAAAGCACATTGGTATATGCATATTCAGTTCTGTGCTGGCTCTATGTGTTTCCACGACTCAGTGCTATTGATATGTCGTGCAGGTGCTGAGGTTAAAGCTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAATATATTGCATCTGTCGCAGGCATGCCTTGGAGAGTCCAAGAGCAAAGGAAGTGAACAGGTTTTTCTGTATGTCAAGGTCGGCAATCAAAAGCTTGTTCTGGGGACATTATCCTCAGAGAAATTCCCACAAGTTTCTTTTGATCTGGTGTTTGACAAAGACTTTGAGCTATCTCATAATTGGAAAAATGGAAGCGTCCACTTTACGGGATATTTATCCCTCCTTCCAGAAGAATATCCTTTCTCTGAGTTCCTAAATAATTTTAATACTGATTCTGAAGAGGATCTTCCACAAGCTGTCATTGACAATGGAAAACCAGAGCCACAGCCACAACCACAGCCTAAGAAAGATGAAAAGCCTGGTACTTCTGGAACGAAGAAAAAAGTGCAGATTGTAGAACCAAACAAAGGTGGCTCTATTGACACTAAGAAGAATGAAGACAGTTCTGACGAAGATGATGATGAGGATGAAGACAGCTCGGATGACGAGAATGCAAATGGAGGTGAAGAAGACGACAGTGATGATGAAAATGAATTTTCTGGGGATGACAGTGATGATGACGATGAAAATGAAGACTTGGATGACAGTATGGAAGAGGATGAGCAGACACCAAAAAAGGCCGAAGCAAGCAAGAAGAGGCCTTTAGAGGCTGCTAATAAAGCGCCTGCTCCTGATAAGAAGACAAAACTCGTCACTCCCCAGAAAACTGATGGCAAGAAAGGCGTTCCTCATGTAGCTACTCCTCATCCTTCAAAACAGGCTGGGAAAATGCCTGCTGCTAGTGACCAAAATAAACAGCAGACTCCCAAATCAGCTAGTGGTGCATTCCCCTGCAAGTCTTGCAAGAGGGCATTTGGCTCAGAAACTGCGTTACAATCCCACACAAAGGCTAAGCACAGTGCTGAGAAGTGACCAGGTTAATATTTCAGGAACAACGTGTTGGATTTGCTCAACCTGGCCAGTACGTTAGATCCGAACCACGATACTGGCTGGTTTTGAATTTTCTACCCCTCAACCCTTTCGAGGTTCATCTTCTAAATGTTCTGATGTGATTTCAAATGTTATTATTATCATAAGCTTTAATGTATGGACACTGGTTTTCCTGGTGATGGTTCGTTTTAGATATCGCATATGCTAGTCTTGACTTATGCTGTAGGTCTTTTTAGATTCAGTAATATATTATCTCTAATGTTACTTTACCTCGAGTTCGCTTAGCTTATTCTTCTGTCTTTTTTTGGCAACATTCGAAGAGAAGAATTAAGTAAGAAAGATGAAATTGCCTGTCAACTTCATCCTTGCTTTCAGATTGCTCTATTGCTTTACCTGTGGTGCTTGGAGACCCTTTGCTTGGATTAGTTGGTTTCTTGGACTAGCCCATGTTGTTGTGCAACTTTGCTCGTCGAATGCTGGCATGGCATGTTCTATCTTTGCTTGGATTAGAGGAGAGTAGAAATAAGCACTAGAAAGGCCAATGTTGGTGACGAGATCTGTGCGCATGTAAAACTTCTTTTTCTAATCTGTGGCGTGTTGGGATCGAAGGACATCGAAATGGTGGATGGAGGCCGTGGATATGACTTTTATGTTTGTGTCTAATAGATTCTTGAACTTAAAAGATTATCTAAAAATATTTGAAGCTTTCAATTTTATGTCTAGTAGTTCTTTATTACTCAAATGTCATGCAATGTAATCAATCTATTAGTGTGAGATCCCACATCAGTTGACAATGAGAACAAAACATTATTTATTAGGGTGTGAAAATTTTCTCCCTAGTATATGCGCTTTAAAAACTCG

Coding sequence (CDS)

ATGCATATTCAGTTCTGTGCTGGCTCTATGTGTTTCCACGACTCAGTGCTATTGATATGTCGTGCAGGTGCTGAGGTTAAAGCTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAATATATTGCATCTGTCGCAGGCATGCCTTGGAGAGTCCAAGAGCAAAGGAAGTGAACAGGTTTTTCTGTATGTCAAGGTCGGCAATCAAAAGCTTGTTCTGGGGACATTATCCTCAGAGAAATTCCCACAAGTTTCTTTTGATCTGGTGTTTGACAAAGACTTTGAGCTATCTCATAATTGGAAAAATGGAAGCGTCCACTTTACGGGATATTTATCCCTCCTTCCAGAAGAATATCCTTTCTCTGAGTTCCTAAATAATTTTAATACTGATTCTGAAGAGGATCTTCCACAAGCTGTCATTGACAATGGAAAACCAGAGCCACAGCCACAACCACAGCCTAAGAAAGATGAAAAGCCTGGTACTTCTGGAACGAAGAAAAAAGTGCAGATTGTAGAACCAAACAAAGGTGGCTCTATTGACACTAAGAAGAATGAAGACAGTTCTGACGAAGATGATGATGAGGATGAAGACAGCTCGGATGACGAGAATGCAAATGGAGGTGAAGAAGACGACAGTGATGATGAAAATGAATTTTCTGGGGATGACAGTGATGATGACGATGAAAATGAAGACTTGGATGACAGTATGGAAGAGGATGAGCAGACACCAAAAAAGGCCGAAGCAAGCAAGAAGAGGCCTTTAGAGGCTGCTAATAAAGCGCCTGCTCCTGATAAGAAGACAAAACTCGTCACTCCCCAGAAAACTGATGGCAAGAAAGGCGTTCCTCATGTAGCTACTCCTCATCCTTCAAAACAGGCTGGGAAAATGCCTGCTGCTAGTGACCAAAATAAACAGCAGACTCCCAAATCAGCTAGTGGTGCATTCCCCTGCAAGTCTTGCAAGAGGGCATTTGGCTCAGAAACTGCGTTACAATCCCACACAAAGGCTAAGCACAGTGCTGAGAAGTGA

Protein sequence

MHIQFCAGSMCFHDSVLLICRAGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKRAFGSETALQSHTKAKHSAEK

Homology

[Close]

BLAST of Carg00930 vs. NCBI nr
Match: KAG7028070.1 (Histone deacetylase HDT3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 635.2 bits (1637), Expect = 3.3e-178
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0


Query: 1   MHIQFCAGSMCFHDSVLLICRAGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQV 60
           MHIQFCAGSMCFHDSVLLICRAGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQV
Sbjct: 1   MHIQFCAGSMCFHDSVLLICRAGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQV 60

Query: 61  FLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPF 120
           FLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPF
Sbjct: 61  FLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPF 120

Query: 121 SEFLNNFNTDSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSID 180
           SEFLNNFNTDSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSID
Sbjct: 121 SEFLNNFNTDSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSID 180

Query: 181 TKKNEDSSDEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDE 240
           TKKNEDSSDEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDE
Sbjct: 181 TKKNEDSSDEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDE 240

Query: 241 QTPKKAEASKKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAAS 300
           QTPKKAEASKKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAAS
Sbjct: 241 QTPKKAEASKKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAAS 300

Query: 301 DQNKQQTPKSASGAFPCKSCKRAFGSETALQSHTKAKHSAEK 343
           DQNKQQTPKSASGAFPCKSCKRAFGSETALQSHTKAKHSAEK
Sbjct: 301 DQNKQQTPKSASGAFPCKSCKRAFGSETALQSHTKAKHSAEK 342

[Close]

BLAST of Carg00930 vs. NCBI nr
Match: KAG6596537.1 (Histone deacetylase HDT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 582.8 bits (1501), Expect = 1.9e-162
Identity = 322/333 (96.70%), Postives = 322/333 (96.70%), Query Frame = 0


Query: 10  MCFHDSVLLICRAGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQ 69
           MCFHDSVLLICRAGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQ
Sbjct: 1   MCFHDSVLLICRAGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQ 60

Query: 70  KLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNT 129
           KLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE           T
Sbjct: 61  KLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE-------EESYT 120

Query: 130 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSD 189
           DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSD
Sbjct: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSD 180

Query: 190 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 249
           EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS
Sbjct: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240

Query: 250 KKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK 309
           KKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK
Sbjct: 241 KKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK 300

Query: 310 SASGAFPCKSCKRAFGSETALQSHTKAKHSAEK 343
           SASGAFPCKSCKRAFGSETALQSHTKAKHSAEK
Sbjct: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSAEK 326

[Close]

BLAST of Carg00930 vs. NCBI nr
Match: XP_023540314.1 (histone deacetylase HDT1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.7 bits (1423), Expect = 2.1e-153
Identity = 308/320 (96.25%), Postives = 308/320 (96.25%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE           TDSEEDLPQAVIDN
Sbjct: 65  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE-------EESYTDSEEDLPQAVIDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
           GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKN DSSDEDDDEDEDSSDDE
Sbjct: 125 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNADSSDEDDDEDEDSSDDE 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
           NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA
Sbjct: 185 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 244

Query: 263 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 322
           PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR
Sbjct: 245 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 304

Query: 323 AFGSETALQSHTKAKHSAEK 343
           AFGSETALQSHTKAKHSAEK
Sbjct: 305 AFGSETALQSHTKAKHSAEK 317

[Close]

BLAST of Carg00930 vs. NCBI nr
Match: XP_022946410.1 (histone deacetylase HDT1 [Cucurbita moschata])

HSP 1 Score: 548.1 bits (1411), Expect = 5.3e-152
Identity = 305/320 (95.31%), Postives = 307/320 (95.94%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE           TDSEEDLPQAVIDN
Sbjct: 65  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE-------EESYTDSEEDLPQAVIDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
           GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKN DSSDEDDD++EDSSDDE
Sbjct: 125 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNADSSDEDDDDNEDSSDDE 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
           NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANK PA
Sbjct: 185 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTPA 244

Query: 263 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 322
           PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR
Sbjct: 245 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 304

Query: 323 AFGSETALQSHTKAKHSAEK 343
           AFGSETALQSHTKAKHSAEK
Sbjct: 305 AFGSETALQSHTKAKHSAEK 317

[Close]

BLAST of Carg00930 vs. NCBI nr
Match: XP_023005787.1 (histone deacetylase HDT1-like [Cucurbita maxima])

HSP 1 Score: 544.3 bits (1401), Expect = 7.6e-151
Identity = 303/320 (94.69%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVKAGEPLLVSPGEENILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE           TDSEEDLPQAVIDN
Sbjct: 65  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE-------EESYTDSEEDLPQAVIDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
           GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNED SDEDDDEDEDSSDDE
Sbjct: 125 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISDEDDDEDEDSSDDE 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
           NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANK PA
Sbjct: 185 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTPA 244

Query: 263 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 322
           PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMP ASDQNKQQ PKSASGAFPCKSCKR
Sbjct: 245 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPKSASGAFPCKSCKR 304

Query: 323 AFGSETALQSHTKAKHSAEK 343
           AFGSETALQSHTKAKHS EK
Sbjct: 305 AFGSETALQSHTKAKHSTEK 317

[Close]

BLAST of Carg00930 vs. ExPASy Swiss-Prot
Match: Q6V9I6 (Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.6e-58
Identity = 159/320 (49.69%), Postives = 194/320 (60.62%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVK+GEPL V PG+  +LHLSQA LGE K   SE V L V +  +KLVLGTL+SEK P
Sbjct: 5   GAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNSEKVP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           Q  FDLVFD+DFELSHN K+GSV+F GY +  P E    E   +   +S+ED+P  + ++
Sbjct: 65  QQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEE--EEDDEDDYDESDEDIPLTLANS 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
           GKPE  P+   K +    ++  K+KV+IVEP K                DDEDE S DD+
Sbjct: 125 GKPE--PKEAGKSNAGKDSASGKQKVRIVEPTK----------------DDEDESSDDDD 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
           +  G +EDDSDD                        +E+TPKKAE +K+R  ++A K P 
Sbjct: 185 SDMGEDEDDSDD-----------------------SEEETPKKAEPAKRRKADSATKTPV 244

Query: 263 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 322
            DKK KL TPQKTDGKKG  HVATPHPSKQA K           TPKSA G+  CK C R
Sbjct: 245 TDKKAKLTTPQKTDGKKGGGHVATPHPSKQASK-----------TPKSA-GSHHCKPCNR 269

Query: 323 AFGSETALQSHTKAKHSAEK 343
           +FGSE AL SH+KAKHSA K
Sbjct: 305 SFGSEGALDSHSKAKHSAGK 269

[Close]

BLAST of Carg00930 vs. ExPASy Swiss-Prot
Match: Q9M4U5 (Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.7e-47
Identity = 147/323 (45.51%), Postives = 199/323 (61.61%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G EVK G  +   PG   ILH+SQA LGESK   S+   +YVKV ++KL +GTLS +K+P
Sbjct: 5   GLEVKPGSTVKCEPGHGFILHVSQAALGESKK--SDSALMYVKVDDKKLAIGTLSIDKYP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVI-D 142
           Q+ FDLVF+K+FELSH  K  SV F+GY    P E    + ++  + D EE+L   VI +
Sbjct: 65  QIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIE---GDEMDLDSEDEEEELNIPVIKE 124

Query: 143 NGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDD 202
           NGK + +   + +K+++   + T  K  +        ++ K  +DS D D+DE +DS +D
Sbjct: 125 NGKADGK---EEQKNQEKAVAATASKSSL-------GLEKKSKDDSDDSDEDESDDSDED 184

Query: 203 ENANGGEEDDSDDENEFSGDDSDDDDENE-DLDDSMEEDEQTPKKAEASKKRPLEAANKA 262
           ++      DDSD+    S D+ DDD  +E D  D  EE+  TPKK EA KKR  E A K 
Sbjct: 185 DS------DDSDEGEGLSPDEGDDDSSDEDDTSDDDEEETPTPKKPEAGKKRGAENALKT 244

Query: 263 PAPDKKTKLVTP--QKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCK 322
           P  DKK K+ TP  QKT GKKG  HVATPHP+K  GK PA +D+  +++PKS  G+ PCK
Sbjct: 245 PLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKS-GGSVPCK 303

Query: 323 SCKRAFGSETALQSHTKAKHSAE 342
           SC + F SE ALQ+H+KAKH A+
Sbjct: 305 SCSKTFNSEMALQAHSKAKHGAK 303

[Close]

BLAST of Carg00930 vs. ExPASy Swiss-Prot
Match: Q9LZR5 (Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-46
Identity = 146/323 (45.20%), Postives = 192/323 (59.44%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G EVK G+PL + PG + ++H+SQ  LGESK+  +E + LYV VG+ KL++GTLS EKFP
Sbjct: 5   GVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSHEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           Q+S ++V +++F LSH WKNGSV F+GY                   D+ +  P+ +ID+
Sbjct: 65  QLSTEIVLERNFALSHTWKNGSVFFSGY-----------------KVDASDPEPEDLIDD 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
                  +  PK           K+V    PN+    D K  +D  D D  E++ S DD+
Sbjct: 125 QLEAAGFKAAPK--------SAAKQVNFQLPNE----DVKAKQD-DDADGSEEDSSDDDD 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEA-ANKAP 262
           + N G+E   ++E   +  DS++DD ++D +D   E E+TPKK E  KKR  E  ++K P
Sbjct: 185 SENSGDE---EEEKVTAESDSEEDDSSDDEEDDSSE-EETPKKPEEPKKRSAEPNSSKNP 244

Query: 263 APDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASD----QNKQQTPKSASGAFPC 322
           A +KK K VTPQKTD KK   HVATPHPSKQAGK            +QQTPKSA GAF C
Sbjct: 245 ASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSA-GAFGC 292

Query: 323 KSCKRAFGSETALQSHTKAKHSA 341
           KSC R F SE  LQSHTKAKHSA
Sbjct: 305 KSCTRTFTSEMGLQSHTKAKHSA 292

[Close]

BLAST of Carg00930 vs. ExPASy Swiss-Prot
Match: Q9M4U4 (Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 146/327 (44.65%), Postives = 191/327 (58.41%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G EVK G  +   PG   +LHLSQA LGESK   S+   +YVK+ +QKL +GTLS +K P
Sbjct: 5   GLEVKPGSTVKCEPGYGFVLHLSQAALGESKK--SDNALMYVKIDDQKLAIGTLSVDKNP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSE---FLNNFNTDSEEDLPQAV 142
            + FDL+FDK+FELSH  K  SV FTGY      E PF E    L++ + D E ++P AV
Sbjct: 65  HIQFDLIFDKEFELSHTSKTTSVFFTGY----KVEQPFEEDEMDLDSEDEDEELNVP-AV 124

Query: 143 IDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSS 202
            +NGK + + Q   K  EK           +  P+K  S D+KK++D  D D+DE +DS 
Sbjct: 125 KENGKADEKKQ---KSQEK----------AVAAPSK-SSPDSKKSKDDDDSDEDETDDSD 184

Query: 203 DDENANGGEEDDSDDENEFSGDDSDDDDENE-DLDDSMEEDEQTPKKAEASKKRPLEAA- 262
           +DE       DDSD+    S ++ DDD  +E D  D  EED  TPKK E  KKR  E++ 
Sbjct: 185 EDET------DDSDE--GLSPEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSV 244

Query: 263 NKAPAPDKKTKLVTP--QKTDGKKGVP-HVATPHPSKQAGKMPAASDQNKQQTPKSASGA 322
            K P  DKK K+ TP  QKT GKKG   HVATPHP+K  GK    +D++ +    +    
Sbjct: 245 LKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSG 300

Query: 323 FPCKSCKRAFGSETALQSHTKAKHSAE 342
            PCKSC ++F SETA Q+H+KAKH  +
Sbjct: 305 VPCKSCSKSFISETAPQAHSKAKHGGK 300

[Close]

BLAST of Carg00930 vs. ExPASy Swiss-Prot
Match: O24591 (Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.3e-40
Identity = 146/327 (44.65%), Postives = 189/327 (57.80%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G EVK G  +   PG   +LHLSQA LGESK   S+   +YVK+ +QKL +GTLS +K P
Sbjct: 5   GLEVKPGSTVKCEPGYGFVLHLSQAALGESKK--SDNALMYVKIDDQKLAIGTLSVDKNP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
            + FDL+FDK+FELSH  K  SV FTGY      E PF E  +  + DSE++      D 
Sbjct: 65  HIQFDLIFDKEFELSHTSKTTSVFFTGY----KVEQPFEE--DEMDLDSEDE------DE 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
               P  +   K DEK   S  K    +  P+K  S D+KK++D  D D+DE +DS +DE
Sbjct: 125 ELNVPVVKENGKADEKKQKSQEK---AVAAPSK-SSPDSKKSKDDDDSDEDETDDSDEDE 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAA-NKAP 262
                   D  DE   S +  DD  + +D  D  EED  TPKK E  KKRP E++  K P
Sbjct: 185 T-------DDSDEGLSSEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLKTP 244

Query: 263 APDKKTKLVTP--QKTDGKKGVP-HVATPHPSKQAGKMPAASDQNKQQTPKSA---SGAF 322
             DKK K+ TP  QKT GKKG   HVATPHP+K  GK    +D++  ++PKSA    G+ 
Sbjct: 245 LSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKS-VKSPKSAPKSGGSV 303

Query: 323 PCKSCKRAFGSETALQSHTKAKHSAEK 343
           PCK C ++F SETALQ+H++AK  A +
Sbjct: 305 PCKPCSKSFISETALQAHSRAKMGASE 303

[Close]

BLAST of Carg00930 vs. ExPASy TrEMBL
Match: A0A6J1G3S8 (histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.6e-152
Identity = 305/320 (95.31%), Postives = 307/320 (95.94%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE           TDSEEDLPQAVIDN
Sbjct: 65  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE-------EESYTDSEEDLPQAVIDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
           GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKN DSSDEDDD++EDSSDDE
Sbjct: 125 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNADSSDEDDDDNEDSSDDE 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
           NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANK PA
Sbjct: 185 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTPA 244

Query: 263 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 322
           PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR
Sbjct: 245 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 304

Query: 323 AFGSETALQSHTKAKHSAEK 343
           AFGSETALQSHTKAKHSAEK
Sbjct: 305 AFGSETALQSHTKAKHSAEK 317

[Close]

BLAST of Carg00930 vs. ExPASy TrEMBL
Match: A0A6J1KU46 (histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.7e-151
Identity = 303/320 (94.69%), Postives = 304/320 (95.00%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVKAGEPLLVSPGEENILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE           TDSEEDLPQAVIDN
Sbjct: 65  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE-------EESYTDSEEDLPQAVIDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
           GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNED SDEDDDEDEDSSDDE
Sbjct: 125 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISDEDDDEDEDSSDDE 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
           NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANK PA
Sbjct: 185 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTPA 244

Query: 263 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCKR 322
           PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMP ASDQNKQQ PKSASGAFPCKSCKR
Sbjct: 245 PDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPKSASGAFPCKSCKR 304

Query: 323 AFGSETALQSHTKAKHSAEK 343
           AFGSETALQSHTKAKHS EK
Sbjct: 305 AFGSETALQSHTKAKHSTEK 317

[Close]

BLAST of Carg00930 vs. ExPASy TrEMBL
Match: A0A6J1CUC4 (histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.6e-122
Identity = 265/324 (81.79%), Postives = 280/324 (86.42%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVK GEPLLVSPGEE ILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDK+FELSHNWKNGSV+FTGY SLLPEE   S       TDSEED+P A +DN
Sbjct: 65  QVSFDLVFDKEFELSHNWKNGSVYFTGYTSLLPEEEESS------YTDSEEDIPVAAVDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGS---IDTKKNEDSSDEDDDEDEDSS 202
           GKPE     QPKKD KP  SG+K+KVQIVEPNK GS   ID+KKN+D+SDEDDDEDEDS 
Sbjct: 125 GKPE----AQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSL 184

Query: 203 DDENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAAN 262
           DDENANGGEEDD+ DDENEFSGDDSD  D NE+ DDS+ EDEQTPKKAEASKKRPLE+AN
Sbjct: 185 DDENANGGEEDDTDDDENEFSGDDSDKTD-NEESDDSLAEDEQTPKKAEASKKRPLESAN 244

Query: 263 KAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCK 322
           K PA DKK KLVTPQKTDGKK V HVATPHPSKQAGK PAA+DQNKQQTPKSA GAFPCK
Sbjct: 245 KTPAADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCK 304

Query: 323 SCKRAFGSETALQSHTKAKHSAEK 343
           SCKRAFGSE ALQSHTKAKHSAEK
Sbjct: 305 SCKRAFGSEGALQSHTKAKHSAEK 317

[Close]

BLAST of Carg00930 vs. ExPASy TrEMBL
Match: A0A1S3B626 (histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 2.1e-122
Identity = 262/324 (80.86%), Postives = 281/324 (86.73%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVK GEPLLVSPGEE ILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDK+FELSHNWKNGSVHFTGY SLLPEE        +  TDSEED P AV DN
Sbjct: 65  QVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEE------ESTYTDSEEDFPLAVTDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNK---GGSIDTKKNEDSSDEDDDEDEDSS 202
           GKPE    P+PKKD KP TSGTKKKVQIVEPNK     +ID+KKNEDSSDEDDDEDE+S+
Sbjct: 125 GKPE----PEPKKDAKPDTSGTKKKVQIVEPNKVASNSNIDSKKNEDSSDEDDDEDEEST 184

Query: 203 DDENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAAN 262
           DDEN NGGEEDD+ DDENE SG DS+D D  ED DDS+EEDEQTPKKAEASKKRPL++AN
Sbjct: 185 DDENENGGEEDDTDDDENESSGVDSEDSD--EDSDDSLEEDEQTPKKAEASKKRPLDSAN 244

Query: 263 KAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCK 322
           K PAPDKK KLVTPQKTDGKKGV HV TPHPSK+AGKMPAA+D+ KQQTPKSA+ AFPCK
Sbjct: 245 KTPAPDKKAKLVTPQKTDGKKGVAHVDTPHPSKKAGKMPAANDKTKQQTPKSANAAFPCK 304

Query: 323 SCKRAFGSETALQSHTKAKHSAEK 343
           +C R FGSETALQSHTKAKH+A+K
Sbjct: 305 TCNRTFGSETALQSHTKAKHTADK 316

[Close]

BLAST of Carg00930 vs. ExPASy TrEMBL
Match: A0A0A0LEE5 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 PE=3 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 3.4e-120
Identity = 259/324 (79.94%), Postives = 281/324 (86.73%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           GAEVK GEPLLVSPGEE ILHLSQACLGESKSKGSE V LYVKVGNQKLVLGTLSSEKFP
Sbjct: 5   GAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSSEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           QVSFDLVFDK+FELSHNWKNGSVHFTGY SLLPEE        +  TDSEED P AV DN
Sbjct: 65  QVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEE------ESTYTDSEEDFPLAVTDN 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNK---GGSIDTKKNEDSSDEDDDEDEDSS 202
           GKPE  P+P+PKKD KP TSGTKKKVQIVEP+K     +ID+KKN+DSSDEDDDEDE+S+
Sbjct: 125 GKPE--PEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEEST 184

Query: 203 DDENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAAN 262
           D+EN NGGEEDDS DDENE SG DS+D D  ED DDS+EEDEQTPKKAEASKKRPL++AN
Sbjct: 185 DNENENGGEEDDSDDDENESSGVDSEDSD--EDSDDSLEEDEQTPKKAEASKKRPLDSAN 244

Query: 263 KAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCK 322
           K PAPDKK KLVTPQKTDGKKGV HVATPHPSK+AGKM AA+D+NKQQTPKSA+ AF CK
Sbjct: 245 KTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCK 304

Query: 323 SCKRAFGSETALQSHTKAKHSAEK 343
           +C R FGSETALQSHTKAKH+A+K
Sbjct: 305 TCNRTFGSETALQSHTKAKHTADK 318

[Close]

BLAST of Carg00930 vs. TAIR 10
Match: AT5G03740.1 (histone deacetylase 2C )

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-47
Identity = 146/323 (45.20%), Postives = 192/323 (59.44%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G EVK G+PL + PG + ++H+SQ  LGESK+  +E + LYV VG+ KL++GTLS EKFP
Sbjct: 5   GVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSHEKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           Q+S ++V +++F LSH WKNGSV F+GY                   D+ +  P+ +ID+
Sbjct: 65  QLSTEIVLERNFALSHTWKNGSVFFSGY-----------------KVDASDPEPEDLIDD 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
                  +  PK           K+V    PN+    D K  +D  D D  E++ S DD+
Sbjct: 125 QLEAAGFKAAPK--------SAAKQVNFQLPNE----DVKAKQD-DDADGSEEDSSDDDD 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEA-ANKAP 262
           + N G+E   ++E   +  DS++DD ++D +D   E E+TPKK E  KKR  E  ++K P
Sbjct: 185 SENSGDE---EEEKVTAESDSEEDDSSDDEEDDSSE-EETPKKPEEPKKRSAEPNSSKNP 244

Query: 263 APDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASD----QNKQQTPKSASGAFPC 322
           A +KK K VTPQKTD KK   HVATPHPSKQAGK            +QQTPKSA GAF C
Sbjct: 245 ASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSA-GAFGC 292

Query: 323 KSCKRAFGSETALQSHTKAKHSA 341
           KSC R F SE  LQSHTKAKHSA
Sbjct: 305 KSCTRTFTSEMGLQSHTKAKHSA 292

[Close]

BLAST of Carg00930 vs. TAIR 10
Match: AT3G44750.2 (histone deacetylase 3 )

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-35
Identity = 132/321 (41.12%), Postives = 165/321 (51.40%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G EVK+G+P+ V+P E  ++H+SQA LGE K+K  E V L+VKVGNQ LVLGTLS+E  P
Sbjct: 5   GIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLSTENIP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           Q+  DLVFDK+FELSH W  GSV+F GY +   E   +SE       + EE++P      
Sbjct: 65  QLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSE-------EEEEEVPAGNAAK 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
              +P+ +P    + KP                               DD+EDE  SD  
Sbjct: 125 AVAKPKAKP---AEVKPAV-----------------------------DDEEDESDSD-- 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
              G +EDDSD      G+DS             EE+E TPKK  +SKKR  E   KAP 
Sbjct: 185 ---GMDEDDSD------GEDS-------------EEEEPTPKKPASSKKRANETTPKAPV 242

Query: 263 PDKKTKL-VTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCK 322
             KK K+ VTPQKTD K            K+ GK          Q+PKSAS    C SCK
Sbjct: 245 SAKKAKVAVTPQKTDEK------------KKGGKA-------ANQSPKSAS-QVSCGSCK 242

Query: 323 RAFGSETALQSHTKAKHSAEK 343
           + F S  AL+SH KAKH+A K
Sbjct: 305 KTFNSGNALESHNKAKHAAAK 242

[Close]

BLAST of Carg00930 vs. TAIR 10
Match: AT3G44750.1 (histone deacetylase 3 )

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-35
Identity = 132/321 (41.12%), Postives = 165/321 (51.40%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G EVK+G+P+ V+P E  ++H+SQA LGE K+K  E V L+VKVGNQ LVLGTLS+E  P
Sbjct: 5   GIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLSTENIP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           Q+  DLVFDK+FELSH W  GSV+F GY +   E   +SE       + EE++P      
Sbjct: 65  QLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSE----EEEEEEEEVPAGNAAK 124

Query: 143 GKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDDEDEDSSDDE 202
              +P+ +P    + KP                               DD+EDE  SD  
Sbjct: 125 AVAKPKAKP---AEVKPAV-----------------------------DDEEDESDSD-- 184

Query: 203 NANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKAPA 262
              G +EDDSD      G+DS             EE+E TPKK  +SKKR  E   KAP 
Sbjct: 185 ---GMDEDDSD------GEDS-------------EEEEPTPKKPASSKKRANETTPKAPV 244

Query: 263 PDKKTKL-VTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSCK 322
             KK K+ VTPQKTD K            K+ GK          Q+PKSAS    C SCK
Sbjct: 245 SAKKAKVAVTPQKTDEK------------KKGGKA-------ANQSPKSAS-QVSCGSCK 245

Query: 323 RAFGSETALQSHTKAKHSAEK 343
           + F S  AL+SH KAKH+A K
Sbjct: 305 KTFNSGNALESHNKAKHAAAK 245

[Close]

BLAST of Carg00930 vs. TAIR 10
Match: AT5G22650.1 (histone deacetylase 2B )

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-32
Identity = 129/317 (40.69%), Postives = 171/317 (53.94%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G  V       V+P E++++H+SQA L +   K  E V L V VG  KLV+GTLS +KFP
Sbjct: 5   GVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQDKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           Q+SFDLVFDK+FELSH+    +VHF GY S   E+       ++F +  +ED+P+AV   
Sbjct: 65  QISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQ-------DDFTSSDDEDVPEAV--- 124

Query: 143 GKPEPQPQPQPKKDEKPGTSG-------TKKKVQIVEPNKGGSIDTKKNEDSSDEDDDED 202
                 P P P      G +G       TK K    +P +    + K   D  DE DDED
Sbjct: 125 ------PAPAPTAVTANGNAGAAVVKADTKPK---AKPAEVKPAEEKPESDEEDESDDED 184

Query: 203 EDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAE-ASKKRPL 262
           E   DD++  G + D+         DDSDDD+E ED +D  EE+E+TPKK E  +KKRP 
Sbjct: 185 ESEEDDDSEKGMDVDE---------DDSDDDEE-EDSED--EEEEETPKKPEPINKKRPN 244

Query: 263 EAANKAPAPDKKTK-----LVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK 322
           E+ +K P   KK K       TPQKT+ KK   H ATPHP+K+ GK P     N  Q+PK
Sbjct: 245 ESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPV----NANQSPK 285

Query: 323 SASGAFPCKSCKRAFGS 327
           S   +    + K+ F S
Sbjct: 305 SGGQSSGGNNNKKPFNS 285

[Close]

BLAST of Carg00930 vs. TAIR 10
Match: AT5G22650.2 (histone deacetylase 2B )

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-32
Identity = 130/317 (41.01%), Postives = 172/317 (54.26%), Query Frame = 0


Query: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82
           G  V       V+P E++++H+SQA L +   K  E V L V VG  KLV+GTLS +KFP
Sbjct: 5   GVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQDKFP 64

Query: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFNTDSEEDLPQAVIDN 142
           Q+SFDLVFDK+FELSH+    +VHF GY S   E+       ++F +  +ED+P+AV   
Sbjct: 65  QISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQ-------DDFTSSDDEDVPEAV--- 124

Query: 143 GKPEPQPQPQPKKDEKPGTSG-------TKKKVQIVEPNKGGSIDTKKNEDSSDEDDDED 202
                 P P P      G +G       TK K    +P +    + K   D  DE DDED
Sbjct: 125 ------PAPAPTAVTANGNAGAAVVKADTKPK---AKPAEVKPAEEKPESDEEDESDDED 184

Query: 203 EDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAE-ASKKRPL 262
           E   DD++  G + D+         DDSDDD+E ED +D  EE+E+TPKK E  +KKRP 
Sbjct: 185 ESEEDDDSEKGMDVDE---------DDSDDDEE-EDSED--EEEEETPKKPEPINKKRPN 244

Query: 263 EAANKAPAPDKKTK-----LVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK 322
           E+ +K P   KK K       TPQKT+ KKG  H ATPHP+K+ GK P     N  Q+PK
Sbjct: 245 ESVSKTPVSGKKAKPAAAPASTPQKTEKKKG-GHTATPHPAKKGGKSPV----NANQSPK 284

Query: 323 SASGAFPCKSCKRAFGS 327
           S   +    + K+ F S
Sbjct: 305 SGGQSSGGNNNKKPFNS 284

The following BLAST results are available for this feature:

BLAST of Carg00930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028070.1	3.3e-178	100.00	Histone deacetylase HDT3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596537.1	1.9e-162	96.70	Histone deacetylase HDT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023540314.1	2.1e-153	96.25	histone deacetylase HDT1 [Cucurbita pepo subsp. pepo]	[more]
XP_022946410.1	5.3e-152	95.31	histone deacetylase HDT1 [Cucurbita moschata]	[more]
XP_023005787.1	7.6e-151	94.69	histone deacetylase HDT1-like [Cucurbita maxima]	[more]

BLAST of Carg00930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6V9I6	4.6e-58	49.69	Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1	[more]
Q9M4U5	3.7e-47	45.51	Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1	[more]
Q9LZR5	1.8e-46	45.20	Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2	[more]
Q9M4U4	1.1e-40	44.65	Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1	[more]
O24591	3.3e-40	44.65	Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1	[more]

BLAST of Carg00930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3S8	2.6e-152	95.31	histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1	[more]
A0A6J1KU46	3.7e-151	94.69	histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 S...	[more]
A0A6J1CUC4	1.6e-122	81.79	histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=...	[more]
A0A1S3B626	2.1e-122	80.86	histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1	[more]
A0A0A0LEE5	3.4e-120	79.94	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 P...	[more]

BLAST of Carg00930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03740.1	1.3e-47	45.20	histone deacetylase 2C	[more]
AT3G44750.2	1.9e-35	41.12	histone deacetylase 3	[more]
AT3G44750.1	2.5e-35	41.12	histone deacetylase 3	[more]
AT5G22650.1	1.2e-32	40.69	histone deacetylase 2B	[more]
AT5G22650.2	1.5e-32	41.01	histone deacetylase 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 313..341 e-value: 1.9E-5 score: 26.8
None	No IPR available	GENE3D	2.60.120.340	Nucleoplasmin core domain	coord: 20..114 e-value: 5.8E-16 score: 60.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..315
None	No IPR available	PANTHER	PTHR31802	32 KDA HEAT SHOCK PROTEIN-RELATED	coord: 23..337
None	No IPR available	PANTHER	PTHR31802:SF12	HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1	coord: 23..337
IPR041232	Nucleoplasmin-like domain	PFAM	PF17800	NPL	coord: 23..111 e-value: 8.3E-12 score: 45.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 317..338
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 315..342 score: 12.7362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00930-RA	Carg00930-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0010162	seed dormancy process
cellular_component	GO:0005730	nucleolus