Carg00833 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00833
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor ERF011
Location	Carg_Chr03: 6969206 .. 6969739 (+)
RNA-Seq Expression	Carg00833
Synteny	Carg00833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGCGGAGGAGAGGGAGGTCGGGAGGGTACCAGAAAAAGAGGGGTCCACAATCAGAAGCTGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCTGAGATTCGAGAACCCAATAAGCGCTCCAGGATTTGGCTCGGCTCTTACTCTTCTCCAGTGGCCGCTGCCAGGGCCTACGATACCGCCGTGTATTACCTCAGAGGCCCTTCCGCCAGGCTTAATTTTCCCGAGTTGTTAGCCGGGGAAGGACGCGGAATTAGCGGCGGTGGATGTGGCGACATGTCGGCGGCTACTATACGGAAGAAAGCCACGGAGGTGGGCGCACGAGTGGATGCTCTGGAGAGTTCCTTAGGTCATCACCAACACAATCACAACAATCGGAACCATCATTCCCACGCATCGGCGTCTCCGCCAGAGACGAAAGCCTGCAGCGGGTTTTTGGATCGGATGGATTTGAACAAATTACCCGACCCGGAAGAAGATGATGAAGAAGGAGATGGGGAGTTCGAGTGGGAGAGACAATGA

mRNA sequence

ATGGAGGGCGGAGGAGAGGGAGGTCGGGAGGGTACCAGAAAAAGAGGGGTCCACAATCAGAAGCTGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCTGAGATTCGAGAACCCAATAAGCGCTCCAGGATTTGGCTCGGCTCTTACTCTTCTCCAGTGGCCGCTGCCAGGGCCTACGATACCGCCGTGTATTACCTCAGAGGCCCTTCCGCCAGGCTTAATTTTCCCGAGTTGTTAGCCGGGGAAGGACGCGGAATTAGCGGCGGTGGATGTGGCGACATGTCGGCGGCTACTATACGGAAGAAAGCCACGGAGGTGGGCGCACGAGTGGATGCTCTGGAGAGTTCCTTAGGTCATCACCAACACAATCACAACAATCGGAACCATCATTCCCACGCATCGGCGTCTCCGCCAGAGACGAAAGCCTGCAGCGGGTTTTTGGATCGGATGGATTTGAACAAATTACCCGACCCGGAAGAAGATGATGAAGAAGGAGATGGGGAGTTCGAGTGGGAGAGACAATGA

Coding sequence (CDS)

ATGGAGGGCGGAGGAGAGGGAGGTCGGGAGGGTACCAGAAAAAGAGGGGTCCACAATCAGAAGCTGTACAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCTGAGATTCGAGAACCCAATAAGCGCTCCAGGATTTGGCTCGGCTCTTACTCTTCTCCAGTGGCCGCTGCCAGGGCCTACGATACCGCCGTGTATTACCTCAGAGGCCCTTCCGCCAGGCTTAATTTTCCCGAGTTGTTAGCCGGGGAAGGACGCGGAATTAGCGGCGGTGGATGTGGCGACATGTCGGCGGCTACTATACGGAAGAAAGCCACGGAGGTGGGCGCACGAGTGGATGCTCTGGAGAGTTCCTTAGGTCATCACCAACACAATCACAACAATCGGAACCATCATTCCCACGCATCGGCGTCTCCGCCAGAGACGAAAGCCTGCAGCGGGTTTTTGGATCGGATGGATTTGAACAAATTACCCGACCCGGAAGAAGATGATGAAGAAGGAGATGGGGAGTTCGAGTGGGAGAGACAATGA

Protein sequence

MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ

Homology

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BLAST of Carg00833 vs. NCBI nr
Match: XP_022949762.1 (ethylene-responsive transcription factor RAP2-10-like [Cucurbita moschata] >KAG7034333.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.8 bits (917), Expect = 5.3e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60
           MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR
Sbjct: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60

Query: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120
           AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL
Sbjct: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120

Query: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 178
           GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ
Sbjct: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 177

[Close]

BLAST of Carg00833 vs. NCBI nr
Match: KAG6604168.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.8 bits (909), Expect = 4.4e-94
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60
           MEGGGEG REGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR
Sbjct: 332 MEGGGEGRREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 391

Query: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120
           AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL
Sbjct: 392 AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 451

Query: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 178
           GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ
Sbjct: 452 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 508

[Close]

BLAST of Carg00833 vs. NCBI nr
Match: XP_023543724.1 (ethylene-responsive transcription factor RAP2-10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 5.8e-94
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60
           MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR
Sbjct: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60

Query: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120
           AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCG+MSAATIRKKATEVGARVDALESSL
Sbjct: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGNMSAATIRKKATEVGARVDALESSL 120

Query: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 178
           GHHQHNHNNRNHHSHASASPPETK CSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ
Sbjct: 121 GHHQHNHNNRNHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 177

[Close]

BLAST of Carg00833 vs. NCBI nr
Match: XP_022977600.1 (ethylene-responsive transcription factor RAP2-10-like [Cucurbita maxima])

HSP 1 Score: 354.0 bits (907), Expect = 7.6e-94
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60
           MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR
Sbjct: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60

Query: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120
           AYDTA+YYLRGPSARLNFP+LLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL
Sbjct: 61  AYDTALYYLRGPSARLNFPDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120

Query: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 178
           GHHQHNHNNRNHHSHASASPPETK CSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ
Sbjct: 121 GHHQHNHNNRNHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 177

[Close]

BLAST of Carg00833 vs. NCBI nr
Match: XP_038881276.1 (ethylene-responsive transcription factor ERF011-like [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 2.1e-80
Identity = 158/176 (89.77%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60
           M+GGG GG E TRKRG+ NQ+LYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR
Sbjct: 1   MDGGGGGGGEATRKRGLDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60

Query: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120
           AYDTAV+YLRGPSARLNFPELLAGEGRGIS  G GDMSAATIRKKATEVGARVDALESSL
Sbjct: 61  AYDTAVFYLRGPSARLNFPELLAGEGRGIS-AGAGDMSAATIRKKATEVGARVDALESSL 120

Query: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWER 177
           G  QH+H+NRNHHSHASASPPETK CSGFLDR+DLNKLPDPEE+DEEGDGEFEWER
Sbjct: 121 G--QHSHHNRNHHSHASASPPETKGCSGFLDRVDLNKLPDPEEEDEEGDGEFEWER 173

[Close]

BLAST of Carg00833 vs. ExPASy Swiss-Prot
Match: Q9SW63 (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702 GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.6e-46
Identity = 111/180 (61.67%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 12  TRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLRG 71
           TRKR     K YKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTAV+YLRG
Sbjct: 23  TRKR----DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRG 82

Query: 72  PSARLNFPELLA------GEGRGISGGGCGDMSAATIRKKATEVGARVDALES-----SL 131
           PSARLNFPELLA      G G G++GG  GDMSAA IR+KA EVGA+VDALE+     + 
Sbjct: 83  PSARLNFPELLAGVTVTGGGGGGVNGG--GDMSAAYIRRKAAEVGAQVDALEAAGAGGNR 142

Query: 132 GHHQHNHNNRNH-----HSH--------ASASPPETKACSGFLDRMDLNKLPDPEEDDEE 168
            HH H H   NH     HS           +S    K C+G L+R+DLNKLPDPE  D++
Sbjct: 143 HHHHHQHQRGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of Carg00833 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 99/159 (62.26%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 11  GTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLR 70
           GTRKR +   K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTAV+YLR
Sbjct: 19  GTRKRDL---KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLR 78

Query: 71  GPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNR 130
           GPSARLNFPELLAG      GG  GD+SAA IR+KA EVGA+VDAL +++  +    N  
Sbjct: 79  GPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRG 138

Query: 131 NHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGD 170
           ++    +      K+ +G L+R+DLNKLPDPE  D + D
Sbjct: 139 DYEKIENC----RKSGNGSLERVDLNKLPDPENSDGDDD 170

[Close]

BLAST of Carg00833 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.4e-42
Identity = 107/192 (55.73%), Postives = 129/192 (67.19%), Query Frame = 0


Query: 1   MEGGG--EGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAA 60
           MEGGG  +    GTRKR     + YKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AA
Sbjct: 1   MEGGGVADVAVPGTRKR----DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAA 60

Query: 61  ARAYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALES 120
           ARAYDTAV+YLRGP+ARLNFPELL GE          DMSAATIRKKATEVGA+VDAL +
Sbjct: 61  ARAYDTAVFYLRGPTARLNFPELLPGEKFSDE-----DMSAATIRKKATEVGAQVDALGT 120

Query: 121 SLGHHQH---------NHNNRNHHSHASASPPE----------TKACSGFLDRMDLNKLP 172
           ++ +++H         + +N+N H +      E           ++    LDR+DLNKLP
Sbjct: 121 AVQNNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLP 180

[Close]

BLAST of Carg00833 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.4e-36
Identity = 87/148 (58.78%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 20  QKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLRGPSARLNFP 79
           ++ +KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAV+YLRGP+A LNFP
Sbjct: 18  ERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77

Query: 80  ELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNRNHHSHASAS 139
           ELL             DMSAATIRKKATEVGA+VDA+ +++     N+  R   S     
Sbjct: 78  ELLPCT-------SAEDMSAATIRKKATEVGAQVDAIGATV---VQNNKRRRVFSQ---- 137

Query: 140 PPETKACSGFLDRMDLNKLPDPEEDDEE 168
             +     G L+ +DLNKLPDPE  D++
Sbjct: 138 --KRDFGGGLLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Carg00833 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 77/97 (79.38%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 19  NQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLRGPSARLNF 78
           N+K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY + VAAARAYDTAV+YLRGPSARLNF
Sbjct: 32  NEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNF 91

Query: 79  PELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDA 116
           PE +  +G G  G G GDMS   IRKKA EVGARVDA
Sbjct: 92  PEEVFKDGNGGEGLG-GDMSPTLIRKKAAEVGARVDA 127

[Close]

BLAST of Carg00833 vs. ExPASy TrEMBL
Match: A0A6J1GD06 (ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita moschata OX=3662 GN=LOC111453053 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.5e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60
           MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR
Sbjct: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60

Query: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120
           AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL
Sbjct: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120

Query: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 178
           GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ
Sbjct: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 177

[Close]

BLAST of Carg00833 vs. ExPASy TrEMBL
Match: A0A6J1IMT2 (ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita maxima OX=3661 GN=LOC111477879 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.7e-94
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60
           MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR
Sbjct: 1   MEGGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAAR 60

Query: 61  AYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120
           AYDTA+YYLRGPSARLNFP+LLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL
Sbjct: 61  AYDTALYYLRGPSARLNFPDLLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSL 120

Query: 121 GHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 178
           GHHQHNHNNRNHHSHASASPPETK CSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ
Sbjct: 121 GHHQHNHNNRNHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 177

[Close]

BLAST of Carg00833 vs. ExPASy TrEMBL
Match: A0A6J1BWB4 (ethylene-responsive transcription factor RAP2-10-like OS=Momordica charantia OX=3673 GN=LOC111005314 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74
Identity = 151/177 (85.31%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 3   GGGEGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAY 62
           GGGEGGREGTRKRGV NQ+ YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAY
Sbjct: 4   GGGEGGREGTRKRGVDNQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAY 63

Query: 63  DTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGH 122
           DTAV+YLRGPSARLNFPELLAGE  GIS GG GDMSAA+IRKKATEVGARVDALESSLGH
Sbjct: 64  DTAVFYLRGPSARLNFPELLAGEACGISAGG-GDMSAASIRKKATEVGARVDALESSLGH 123

Query: 123 HQHNHN--NRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWERQ 178
           H H+H+  NR+H  H SASPPE K+CSGFLDR+DLNKLPDPE   EE DGEF+WERQ
Sbjct: 124 HHHHHHSLNRSHDPHESASPPELKSCSGFLDRVDLNKLPDPE---EEADGEFDWERQ 176

[Close]

BLAST of Carg00833 vs. ExPASy TrEMBL
Match: A0A0A0KIC8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G491030 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.4e-71
Identity = 147/177 (83.05%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKR-GVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAA 60
           M+GGG    E TRKR  + NQ+LYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAA
Sbjct: 1   MDGGGV--PEATRKRSALDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAA 60

Query: 61  RAYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESS 120
           RAYDTAV+YLRGPSARLNFPELLAGEGRGI+  G GDMSAA+IRKKATEVGARVDALESS
Sbjct: 61  RAYDTAVFYLRGPSARLNFPELLAGEGRGIT-AGAGDMSAASIRKKATEVGARVDALESS 120

Query: 121 LGHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWER 177
           +G       +R+HHSHASASPPETK CSGFLDR+DLNKLPDPEE+DEEGDGEFEWER
Sbjct: 121 VG-----QQSRSHHSHASASPPETKGCSGFLDRVDLNKLPDPEEEDEEGDGEFEWER 169

[Close]

BLAST of Carg00833 vs. ExPASy TrEMBL
Match: A0A5D3CLU0 (Ethylene-responsive transcription factor ERF011 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004650 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.7e-71
Identity = 147/177 (83.05%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 1   MEGGGEGGREGTRKR-GVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAA 60
           M+GGG    E TRKR G+ NQ+LYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAA
Sbjct: 1   MDGGGV--PEATRKRSGLDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAA 60

Query: 61  RAYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESS 120
           RAYDTAV+YLRGPSARLNFPELLAGEGRGI+  G GDMSAA+IRKKATEVGARVDA ESS
Sbjct: 61  RAYDTAVFYLRGPSARLNFPELLAGEGRGIT-AGAGDMSAASIRKKATEVGARVDAQESS 120

Query: 121 LGHHQHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGDGEFEWER 177
           LG       +R+HHSH SASPPETK CSGFLDR+DLNKLPDPEE+DEEGDGEFEWER
Sbjct: 121 LG-----QQSRSHHSHTSASPPETKGCSGFLDRVDLNKLPDPEEEDEEGDGEFEWER 169

[Close]

BLAST of Carg00833 vs. TAIR 10
Match: AT4G36900.1 (related to AP2 10 )

HSP 1 Score: 186.0 bits (471), Expect = 2.5e-47
Identity = 111/180 (61.67%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 12  TRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLRG 71
           TRKR     K YKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTAV+YLRG
Sbjct: 23  TRKR----DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRG 82

Query: 72  PSARLNFPELLA------GEGRGISGGGCGDMSAATIRKKATEVGARVDALES-----SL 131
           PSARLNFPELLA      G G G++GG  GDMSAA IR+KA EVGA+VDALE+     + 
Sbjct: 83  PSARLNFPELLAGVTVTGGGGGGVNGG--GDMSAAYIRRKAAEVGAQVDALEAAGAGGNR 142

Query: 132 GHHQHNHNNRNH-----HSH--------ASASPPETKACSGFLDRMDLNKLPDPEEDDEE 168
            HH H H   NH     HS           +S    K C+G L+R+DLNKLPDPE  D++
Sbjct: 143 HHHHHQHQRGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of Carg00833 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-43
Identity = 99/159 (62.26%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 11  GTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLR 70
           GTRKR +   K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTAV+YLR
Sbjct: 19  GTRKRDL---KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLR 78

Query: 71  GPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNR 130
           GPSARLNFPELLAG      GG  GD+SAA IR+KA EVGA+VDAL +++  +    N  
Sbjct: 79  GPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRG 138

Query: 131 NHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEEGD 170
           ++    +      K+ +G L+R+DLNKLPDPE  D + D
Sbjct: 139 DYEKIENC----RKSGNGSLERVDLNKLPDPENSDGDDD 170

[Close]

BLAST of Carg00833 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-43
Identity = 107/192 (55.73%), Postives = 129/192 (67.19%), Query Frame = 0


Query: 1   MEGGG--EGGREGTRKRGVHNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAA 60
           MEGGG  +    GTRKR     + YKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AA
Sbjct: 1   MEGGGVADVAVPGTRKR----DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAA 60

Query: 61  ARAYDTAVYYLRGPSARLNFPELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALES 120
           ARAYDTAV+YLRGP+ARLNFPELL GE          DMSAATIRKKATEVGA+VDAL +
Sbjct: 61  ARAYDTAVFYLRGPTARLNFPELLPGEKFSDE-----DMSAATIRKKATEVGAQVDALGT 120

Query: 121 SLGHHQH---------NHNNRNHHSHASASPPE----------TKACSGFLDRMDLNKLP 172
           ++ +++H         + +N+N H +      E           ++    LDR+DLNKLP
Sbjct: 121 AVQNNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLP 180

[Close]

BLAST of Carg00833 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 152.5 bits (384), Expect = 3.1e-37
Identity = 87/148 (58.78%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 20  QKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLRGPSARLNFP 79
           ++ +KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAV+YLRGP+A LNFP
Sbjct: 18  ERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77

Query: 80  ELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHHQHNHNNRNHHSHASAS 139
           ELL             DMSAATIRKKATEVGA+VDA+ +++     N+  R   S     
Sbjct: 78  ELLPCT-------SAEDMSAATIRKKATEVGAQVDAIGATV---VQNNKRRRVFSQ---- 137

Query: 140 PPETKACSGFLDRMDLNKLPDPEEDDEE 168
             +     G L+ +DLNKLPDPE  D++
Sbjct: 138 --KRDFGGGLLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Carg00833 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 151.0 bits (380), Expect = 9.1e-37
Identity = 77/97 (79.38%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 19  NQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVYYLRGPSARLNF 78
           N+K YKGIRMRKWGKWVAEIREPNKRSRIWLGSY + VAAARAYDTAV+YLRGPSARLNF
Sbjct: 32  NEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNF 91

Query: 79  PELLAGEGRGISGGGCGDMSAATIRKKATEVGARVDA 116
           PE +  +G G  G G GDMS   IRKKA EVGARVDA
Sbjct: 92  PEEVFKDGNGGEGLG-GDMSPTLIRKKAAEVGARVDA 127

The following BLAST results are available for this feature:

BLAST of Carg00833 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949762.1	5.3e-95	100.00	ethylene-responsive transcription factor RAP2-10-like [Cucurbita moschata] >KAG7...	[more]
KAG6604168.1	4.4e-94	99.44	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023543724.1	5.8e-94	98.87	ethylene-responsive transcription factor RAP2-10-like [Cucurbita pepo subsp. pep...	[more]
XP_022977600.1	7.6e-94	98.31	ethylene-responsive transcription factor RAP2-10-like [Cucurbita maxima]	[more]
XP_038881276.1	2.1e-80	89.77	ethylene-responsive transcription factor ERF011-like [Benincasa hispida]	[more]

BLAST of Carg00833 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW63	3.6e-46	61.67	Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702...	[more]
O22174	1.4e-42	62.26	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	5.4e-42	55.73	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	4.4e-36	58.78	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	1.3e-35	79.38	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg00833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD06	2.5e-95	100.00	ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1IMT2	3.7e-94	98.31	ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1BWB4	1.9e-74	85.31	ethylene-responsive transcription factor RAP2-10-like OS=Momordica charantia OX=...	[more]
A0A0A0KIC8	4.4e-71	83.05	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G491030 PE=...	[more]
A0A5D3CLU0	5.7e-71	83.05	Ethylene-responsive transcription factor ERF011 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Carg00833 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36900.1	2.5e-47	61.67	related to AP2 10	[more]
AT2G23340.1	1.0e-43	62.26	DREB and EAR motif protein 3	[more]
AT5G67190.1	3.8e-43	55.73	DREB and EAR motif protein 2	[more]
AT3G50260.1	3.1e-37	58.78	cooperatively regulated by ethylene and jasmonate 1	[more]
AT4G06746.1	9.1e-37	79.38	related to AP2 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 61..81 score: 51.95 coord: 23..34 score: 56.36
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 22..85 e-value: 3.4E-36 score: 136.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..71 e-value: 3.7E-11 score: 43.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 22..79 score: 21.746248
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 21..81 e-value: 4.35284E-25 score: 90.0235
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..80 e-value: 5.0E-24 score: 86.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..177
None	No IPR available	PANTHER	PTHR31729:SF0	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10	coord: 6..166
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 6..166
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 22..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00833-RA	Carg00833-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity