Carg00822 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg00822
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmicrotubule-associated protein RP/EB family member 1C-like
LocationCarg_Chr03: 6929685 .. 6931423 (+)
RNA-Seq ExpressionCarg00822
SyntenyCarg00822
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACAAACATTGGGATGATGGATTCTGCGTATTTCGTTGGAAGATCGGAGATCCTCGCGTGGATCAACTCTACTCTCCACCTTAATCTTTCCAAAGTCGAGGAGGTTTCTCCCGAAACCCCTATTGCGTTACTTCTTTTGTTCGTATTTGTTCTGAGCTTTTTTTTGGAAATTCTGTTTATTTGACCCTTATTATGGATTCTTGAATTGTAGGCATGCTCTGGTGCGGTTCATTGCCAATTGATGGATGCGGCTCACCCAGGGATGGTGCCGATGCACAAGGTCAATTTTGATGCGAAAAGCGAGTACGAAATGATCCAGAATTATAAGGTCCTCCAAGATGTGTTCAACAAATTGAAGATCACCAAGGTATCCTTTTTAATAACCCCCTTTGGTATTATCTACTATTCGTACAACTTCACAGATTAATTCTGTTTCTGTAAGAAATATTCCAACTTATTATGATTTTGGATTGGGTTCTTTATATCTGCTCTGTACTTGATCTGCACTTAGTTACTGTCTTCCTTGCAATGTTGTAGCATATCGAGGTGAGCAAGCTTGTGAAAGGAAGGCCCCTTGATAATCTGGAGTTCATGCAGTGGATGAAGCGTTATTGTGATTCCGCTAATGGAGGCGTTTTGCAGTGGTAATCTGGTCTATTACCTGCTACAATTTTCAATTAACCAATATTGAGTTTTTGTTTATAAGGGTTGCGGTAACCATGCTACTTTTAACTCATAATTACTTAATCTCACCCCTTTTGGACCTAACATGCAAATATTTGATGATTTGAACTATAAGTAAATTCACAATGGTAAACTTCAATGTTTGAAAAGTGATGATCATAAAGAAGTTAGTAGTCTGTTAATATTAGATTGTCAAATTACACTACAACAGTTCATATGTTTATGGTTCAATTTTGTTTTCTTTTTAGTTATAATGCTTTGGAAAGGCGAGAAGCATCCAAGGGTGGAAAGGACGCAAGCAGGAAGAGCACCACATCACATTCCTCTGCAAAAGGTTCAACAGCTGCTGCATCCAGGGCTCAGGTCTCTCAGAATGCTCGGAGAAATGAGGCATCAGTGAACTCTGGAAATCAGGTAGCAAATGTTTCAAAACCTCCATCCAATGGAGTATCTCCATATGATGAACAGGTATCTTCTGAAGCTGCGTGAACTTTGATAATATGGACGAAAAGAAACTGGAGAGTACATATATACTTACTAATGTAAAATGCAGATCACGACGTTGAAACTGTCGATCGACAGCCTTGAGAAAGAGAGGGATTTCTACTTTTCTAAGCTAAGAGATATTGAGATACTCTGCCAGAGTCCACAGATTGAAAGTTTGCCTGTACTTGTTTCTGAAATTCTCTGTTTTGTATCTGCATTTTCTTCGGTCTATTAGAATTTCAAGCCCATGAAGTTGAGCATTTTGATTTCGTTTCTTTTCAGGCTGTAGGAGCTATAAGGAAGATACTGTATGCTGTTGATGATGATGCATCAGTGGTGGCAGAAGCTCAAGCGATGTTGTCCGTTCACCAGAAGGAAACGATAGATCTTTTGAGTCCAATAGCTGAAGTTTCTGATGAGAAGCTAAGTTTAGAATCCCAGAAGAGAAAAAGTGTAATCAATTTTGATGTAGACGTTGTTGGCATGACAACTTTGTCTCCCAGGCGGAGGGTATCTGATGCTTCTGATGTTCATTGCAGTGGGTCACCCCTTATGACATACTGA

mRNA sequence

ATGGCGACAAACATTGGGATGATGGATTCTGCGTATTTCGTTGGAAGATCGGAGATCCTCGCGTGGATCAACTCTACTCTCCACCTTAATCTTTCCAAAGTCGAGGAGGCATGCTCTGGTGCGGTTCATTGCCAATTGATGGATGCGGCTCACCCAGGGATGGTGCCGATGCACAAGGTCAATTTTGATGCGAAAAGCGAGTACGAAATGATCCAGAATTATAAGGTCCTCCAAGATGTGTTCAACAAATTGAAGATCACCAAGCATATCGAGGTGAGCAAGCTTGTGAAAGGAAGGCCCCTTGATAATCTGGAGTTCATGCAGTGGATGAAGCGTTATTGTGATTCCGCTAATGGAGGCGTTTTGCAGTGTTATAATGCTTTGGAAAGGCGAGAAGCATCCAAGGGTGGAAAGGACGCAAGCAGGAAGAGCACCACATCACATTCCTCTGCAAAAGGTTCAACAGCTGCTGCATCCAGGGCTCAGGTCTCTCAGAATGCTCGGAGAAATGAGGCATCAGTGAACTCTGGAAATCAGGTAGCAAATGTTTCAAAACCTCCATCCAATGGAGTATCTCCATATGATGAACAGATCACGACGTTGAAACTGTCGATCGACAGCCTTGAGAAAGAGAGGGATTTCTACTTTTCTAAGCTAAGAGATATTGAGATACTCTGCCAGAGTCCACAGATTGAAAGTTTGCCTGCTGTAGGAGCTATAAGGAAGATACTGTATGCTGTTGATGATGATGCATCAGTGGTGGCAGAAGCTCAAGCGATGTTGTCCGTTCACCAGAAGGAAACGATAGATCTTTTGAGTCCAATAGCTGAAGTTTCTGATGAGAAGCTAAGTTTAGAATCCCAGAAGAGAAAAAGTGTAATCAATTTTGATGTAGACGTTGTTGGCATGACAACTTTGTCTCCCAGGCGGAGGGTATCTGATGCTTCTGATGTTCATTGCAGTGGGTCACCCCTTATGACATACTGA

Coding sequence (CDS)

ATGGCGACAAACATTGGGATGATGGATTCTGCGTATTTCGTTGGAAGATCGGAGATCCTCGCGTGGATCAACTCTACTCTCCACCTTAATCTTTCCAAAGTCGAGGAGGCATGCTCTGGTGCGGTTCATTGCCAATTGATGGATGCGGCTCACCCAGGGATGGTGCCGATGCACAAGGTCAATTTTGATGCGAAAAGCGAGTACGAAATGATCCAGAATTATAAGGTCCTCCAAGATGTGTTCAACAAATTGAAGATCACCAAGCATATCGAGGTGAGCAAGCTTGTGAAAGGAAGGCCCCTTGATAATCTGGAGTTCATGCAGTGGATGAAGCGTTATTGTGATTCCGCTAATGGAGGCGTTTTGCAGTGTTATAATGCTTTGGAAAGGCGAGAAGCATCCAAGGGTGGAAAGGACGCAAGCAGGAAGAGCACCACATCACATTCCTCTGCAAAAGGTTCAACAGCTGCTGCATCCAGGGCTCAGGTCTCTCAGAATGCTCGGAGAAATGAGGCATCAGTGAACTCTGGAAATCAGGTAGCAAATGTTTCAAAACCTCCATCCAATGGAGTATCTCCATATGATGAACAGATCACGACGTTGAAACTGTCGATCGACAGCCTTGAGAAAGAGAGGGATTTCTACTTTTCTAAGCTAAGAGATATTGAGATACTCTGCCAGAGTCCACAGATTGAAAGTTTGCCTGCTGTAGGAGCTATAAGGAAGATACTGTATGCTGTTGATGATGATGCATCAGTGGTGGCAGAAGCTCAAGCGATGTTGTCCGTTCACCAGAAGGAAACGATAGATCTTTTGAGTCCAATAGCTGAAGTTTCTGATGAGAAGCTAAGTTTAGAATCCCAGAAGAGAAAAAGTGTAATCAATTTTGATGTAGACGTTGTTGGCATGACAACTTTGTCTCCCAGGCGGAGGGTATCTGATGCTTCTGATGTTCATTGCAGTGGGTCACCCCTTATGACATACTGA

Protein sequence

MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGGVLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQVANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAIRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDVVGMTTLSPRRRVSDASDVHCSGSPLMTY
Homology
[Close]
BLAST of Carg00822 vs. NCBI nr
Match: KAG7034322.1 (Microtubule-associated protein RP/EB family member 1C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 629.0 bits (1621), Expect = 2.3e-176
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV
Sbjct: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180

Query: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240
           ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI
Sbjct: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240

Query: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300
           RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV
Sbjct: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300

Query: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           VGMTTLSPRRRVSDASDVHCSGSPLMTY
Sbjct: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]
BLAST of Carg00822 vs. NCBI nr
Match: XP_022950119.1 (microtubule-associated protein RP/EB family member 1C-like [Cucurbita moschata] >KAG6604159.1 Microtubule-associated protein RP/EB family member 1C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 623.6 bits (1607), Expect = 9.5e-175
Identity = 325/328 (99.09%), Postives = 327/328 (99.70%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VLQCYNALERREASKGGKDAS+KSTTSHSSAKGSTAAASRAQVSQNARRNEAS+NSGNQV
Sbjct: 121 VLQCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASMNSGNQV 180

Query: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240
           ANVSKPPSNGVS YDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI
Sbjct: 181 ANVSKPPSNGVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240

Query: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300
           RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV
Sbjct: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300

Query: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           VGMTTLSPRRRVSDASDVHCSGSPLMTY
Sbjct: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]
BLAST of Carg00822 vs. NCBI nr
Match: XP_022977562.1 (microtubule-associated protein RP/EB family member 1C-like [Cucurbita maxima])

HSP 1 Score: 621.7 bits (1602), Expect = 3.6e-174
Identity = 324/328 (98.78%), Postives = 325/328 (99.09%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VLQCYNALERREASKGGKDAS+KSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV
Sbjct: 121 VLQCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180

Query: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240
           ANVSKPPSNGVS YDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI
Sbjct: 181 ANVSKPPSNGVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240

Query: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300
           RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAE SDEKLSLESQKRKSVINFDVD 
Sbjct: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEASDEKLSLESQKRKSVINFDVDA 300

Query: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           VGMTTLSPRRRVSDASDVHCSGSPLMTY
Sbjct: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]
BLAST of Carg00822 vs. NCBI nr
Match: XP_023544531.1 (microtubule-associated protein RP/EB family member 1C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.5 bits (1599), Expect = 8.0e-174
Identity = 324/328 (98.78%), Postives = 325/328 (99.09%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VL CYNALERREASKGGKDAS+KSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV
Sbjct: 121 VLLCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180

Query: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240
           AN SKPPSNGVS YDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI
Sbjct: 181 ANASKPPSNGVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240

Query: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300
           RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV
Sbjct: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300

Query: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           VGMTTLSPRRRVSDASDVHCSGSPLMTY
Sbjct: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]
BLAST of Carg00822 vs. NCBI nr
Match: XP_038883112.1 (microtubule-associated protein RP/EB family member 1C-like [Benincasa hispida])

HSP 1 Score: 581.3 bits (1497), Expect = 5.4e-162
Identity = 303/329 (92.10%), Postives = 316/329 (96.05%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VLQ YNALERREASKGGKDA++KSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQ 
Sbjct: 121 VLQSYNALERREASKGGKDANKKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANVSKPPSN-GVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240
           AN SKP SN G++ YDEQIT LKLSIDSLEKERDFYF+KLRDIEILCQ+P+IESLP VGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITALKLSIDSLEKERDFYFAKLRDIEILCQTPEIESLPVVGA 240

Query: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVD 300
           IRKILYAVDDDASVVAEAQAM+SVHQ E I+LLSPIAEVSDEKL+LE+QKRKS INFDVD
Sbjct: 241 IRKILYAVDDDASVVAEAQAMVSVHQNEPINLLSPIAEVSDEKLTLETQKRKSFINFDVD 300

Query: 301 VVGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           V G+ TLSPR+RVSDASDVHCSGSPLMTY
Sbjct: 301 VAGIITLSPRQRVSDASDVHCSGSPLMTY 329

[Close]
BLAST of Carg00822 vs. ExPASy Swiss-Prot
Match: Q9FGQ6 (Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX=3702 GN=EB1C PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.9e-110
Identity = 228/341 (66.86%), Postives = 261/341 (76.54%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTL LNLSKVEEACSGAVHCQLMD+ HPG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDS NGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAA-SRAQVSQNARRNE-ASVNSGN 180
               Y+ALERREASKGGK+A++++  +  S K S+++A  R   S   R++E  S N+G 
Sbjct: 121 -QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTGT 180

Query: 181 QVANV------SKP---PSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSP 240
             ++       SKP    S  V  YDE+IT LKL IDSLEKERDFYFSKLRD+EILCQ+P
Sbjct: 181 HHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQNP 240

Query: 241 QIESLPAVGAIRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLS--LES 300
             E LP VG+I++ILYA D +    AE Q             LSPIAE S+E+ +   ES
Sbjct: 241 DTEHLPLVGSIKRILYAADGEDVGAAETQT------------LSPIAEGSEERRNSVTES 300

Query: 301 QKRKSVINFDVDVVGMTTLSPRRRVSDASDVHCSG-SPLMT 328
           QKRK ++N DVDV  +TTLSPR+R+SDASDV CSG SPL+T
Sbjct: 301 QKRKLIVNLDVDVAAITTLSPRQRLSDASDVKCSGSSPLLT 328

[Close]
BLAST of Carg00822 vs. ExPASy Swiss-Prot
Match: Q9FJJ5 (Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX=3702 GN=EB1B PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.3e-75
Identity = 153/273 (56.04%), Postives = 199/273 (72.89%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL+WIN  LHLNLS++EEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NF+AK+EYEMIQNYKV+Q+VF KLKITK +EV++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VL-QCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQ 180
           ++ + YN +ERR  S+GG++          S KGS+  +   Q +     +   V + N+
Sbjct: 121 IMNENYNPVERR--SRGGRE---------KSVKGSSKISKSLQTN---NMHHPPVATSNK 180

Query: 181 VANVSKPPSNG----------VSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSP 240
            A   +  S+G          V    +++  LK+S+D LEKERDFYFSKLRDIEILCQ+P
Sbjct: 181 PAGPKQAKSHGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTP 240

Query: 241 QIESLPAVGAIRKILYAVDDDASVVAEAQAMLS 263
           +++ LP V A++KILYA D + SV+ EAQ  L+
Sbjct: 241 ELDDLPIVVAVKKILYATDANESVLEEAQECLN 259

[Close]
BLAST of Carg00822 vs. ExPASy Swiss-Prot
Match: Q7XJ60 (Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX=3702 GN=EB1A PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.8e-75
Identity = 155/287 (54.01%), Postives = 202/287 (70.38%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL WIN  LHLNLS+VEEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKITK +E+++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VL-QCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQ 180
           ++ + YN +ERR  S+ GK+          S KGS       Q + N     +S    ++
Sbjct: 121 IMNENYNPVERR--SRNGKE---------RSVKGSNKIPKSLQTNNNHPPPNSSSVGLSK 180

Query: 181 VANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240
            +      +  V    +++  LK+S D LEKERDFYFSKLRD+EILCQ+P+++ LP V A
Sbjct: 181 ASGPKSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVA 240

Query: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLE 287
           ++KILYA D + S + +AQ  L+    +++ +    AE + E+L  E
Sbjct: 241 VKKILYATDANESALEDAQEYLN----QSLGVEDDEAEGNGEQLEEE 272

[Close]
BLAST of Carg00822 vs. ExPASy Swiss-Prot
Match: Q9UPY8 (Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=MAPRE3 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.5e-39
Identity = 103/273 (37.73%), Postives = 153/273 (56.04%), Query Frame = 0 

Query: 14  VGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKVNFDAKSEYEMIQN 73
           + R ++LAW+N +LHLN +K+E+ CSGA +CQ MD   PG V + KV F AK E+E I N
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74

Query: 74  YKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGGVLQCYNALERREA 133
           +KVLQ  F K+ + K I V KLVKG+  DN EF+QW K++ D+   G  + YN L  R+ 
Sbjct: 75  FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG--KDYNPLLARQ- 134

Query: 134 SKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQVANVS-------KP 193
              G+D +            S      A   + +     ++ +  +++NV+        P
Sbjct: 135 ---GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNP 194

Query: 194 PS--NG-------VSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAV 253
           PS  NG       +   ++Q+  LKL++D LEKERDFYFSKLRDIE++CQ  + E+ P +
Sbjct: 195 PSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVI 254

Query: 254 GAIRKILYAVDDDASVVAEAQAMLSVHQKETID 271
             I  ILYA ++  +   + +  +  HQ+E  D
Sbjct: 255 SGIIGILYATEEGFAPPEDDE--IEEHQQEDQD 279

[Close]
BLAST of Carg00822 vs. ExPASy Swiss-Prot
Match: Q6PER3 (Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN=Mapre3 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.6e-39
Identity = 103/273 (37.73%), Postives = 153/273 (56.04%), Query Frame = 0 

Query: 14  VGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKVNFDAKSEYEMIQN 73
           + R ++LAW+N +LHLN +K+E+ CSGA +CQ MD   PG V + KV F AK E+E I N
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74

Query: 74  YKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGGVLQCYNALERREA 133
           +KVLQ  F K+ + K I V KLVKG+  DN EF+QW K++ D+   G  + YN L  R+ 
Sbjct: 75  FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG--KDYNPLLARQ- 134

Query: 134 SKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQVANVS-------KP 193
              G+D +            S      A   + +     ++ +  +++NV+        P
Sbjct: 135 ---GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNP 194

Query: 194 PS--NG-------VSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAV 253
           PS  NG       +   ++Q+  LKL++D LEKERDFYFSKLRDIE++CQ  + E+ P +
Sbjct: 195 PSARNGGHEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVI 254

Query: 254 GAIRKILYAVDDDASVVAEAQAMLSVHQKETID 271
             I  ILYA ++  +   + +  +  HQ+E  D
Sbjct: 255 SGIIGILYATEEGFAPPEDDE--IEEHQQEDQD 279

[Close]
BLAST of Carg00822 vs. ExPASy TrEMBL
Match: A0A6J1GEV8 (microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita moschata OX=3662 GN=LOC111453299 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 4.6e-175
Identity = 325/328 (99.09%), Postives = 327/328 (99.70%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VLQCYNALERREASKGGKDAS+KSTTSHSSAKGSTAAASRAQVSQNARRNEAS+NSGNQV
Sbjct: 121 VLQCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASMNSGNQV 180

Query: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240
           ANVSKPPSNGVS YDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI
Sbjct: 181 ANVSKPPSNGVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240

Query: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300
           RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV
Sbjct: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300

Query: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           VGMTTLSPRRRVSDASDVHCSGSPLMTY
Sbjct: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]
BLAST of Carg00822 vs. ExPASy TrEMBL
Match: A0A6J1IIV4 (microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita maxima OX=3661 GN=LOC111477857 PE=3 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 1.7e-174
Identity = 324/328 (98.78%), Postives = 325/328 (99.09%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VLQCYNALERREASKGGKDAS+KSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV
Sbjct: 121 VLQCYNALERREASKGGKDASKKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180

Query: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240
           ANVSKPPSNGVS YDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI
Sbjct: 181 ANVSKPPSNGVSAYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240

Query: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300
           RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAE SDEKLSLESQKRKSVINFDVD 
Sbjct: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEASDEKLSLESQKRKSVINFDVDA 300

Query: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           VGMTTLSPRRRVSDASDVHCSGSPLMTY
Sbjct: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 328

[Close]
BLAST of Carg00822 vs. ExPASy TrEMBL
Match: A0A5D3CM17 (Microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004530 PE=3 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.7e-161
Identity = 300/329 (91.19%), Postives = 314/329 (95.44%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           V+Q YNALERREASKGGKDAS+KSTTSHSSAKGST AASRAQVSQNARRNEASVNSGNQ 
Sbjct: 121 VVQSYNALERREASKGGKDASKKSTTSHSSAKGSTGAASRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANVSKPPSN-GVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240
           AN SKP SN G++ YDEQITTLKLSIDSLEKERDFYF+KLRDIEILCQSP+I+ LP VGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDELPVVGA 240

Query: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVD 300
           IRKILYA+DDDASVVAEAQAM+S H  E I+LLSPIAEVSDEKLSLE+QKRKS+INFDVD
Sbjct: 241 IRKILYAIDDDASVVAEAQAMVSGHHNEPINLLSPIAEVSDEKLSLETQKRKSIINFDVD 300

Query: 301 VVGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           V G+TTLSPR+R SDASDVHCSGSPLMTY
Sbjct: 301 VAGITTLSPRQRTSDASDVHCSGSPLMTY 329

[Close]
BLAST of Carg00822 vs. ExPASy TrEMBL
Match: A0A1S3B1G3 (microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo OX=3656 GN=LOC103484804 PE=3 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.7e-161
Identity = 300/329 (91.19%), Postives = 314/329 (95.44%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           V+Q YNALERREASKGGKDAS+KSTTSHSSAKGST AASRAQVSQNARRNEASVNSGNQ 
Sbjct: 121 VVQSYNALERREASKGGKDASKKSTTSHSSAKGSTGAASRAQVSQNARRNEASVNSGNQA 180

Query: 181 ANVSKPPSN-GVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240
           AN SKP SN G++ YDEQITTLKLSIDSLEKERDFYF+KLRDIEILCQSP+I+ LP VGA
Sbjct: 181 ANASKPSSNGGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIEILCQSPEIDELPVVGA 240

Query: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVD 300
           IRKILYA+DDDASVVAEAQAM+S H  E I+LLSPIAEVSDEKLSLE+QKRKS+INFDVD
Sbjct: 241 IRKILYAIDDDASVVAEAQAMVSGHHNEPINLLSPIAEVSDEKLSLETQKRKSIINFDVD 300

Query: 301 VVGMTTLSPRRRVSDASDVHCSGSPLMTY 329
           V G+TTLSPR+R SDASDVHCSGSPLMTY
Sbjct: 301 VAGITTLSPRQRTSDASDVHCSGSPLMTY 329

[Close]
BLAST of Carg00822 vs. ExPASy TrEMBL
Match: A0A6J1BTB1 (microtubule-associated protein RP/EB family member 1C-like OS=Momordica charantia OX=3673 GN=LOC111005364 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.0e-158
Identity = 291/328 (88.72%), Postives = 312/328 (95.12%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNK KITKHIEVSKLVKGRPLDNLEFMQWMKRYCDS NGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKRKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQV 180
           VLQ YNALERREASKGGK+AS++STTSHSSAKGST A S+ Q+SQNAR+N+ SVNSGNQ 
Sbjct: 121 VLQSYNALERREASKGGKEASKRSTTSHSSAKGST-AVSKPQISQNARKNDTSVNSGNQA 180

Query: 181 ANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGAI 240
            NVSKPPSNG++ YDEQITTLKLSIDSLEKERDFYF+KLRDIE+LCQSP+IE+LP VGAI
Sbjct: 181 VNVSKPPSNGLTAYDEQITTLKLSIDSLEKERDFYFAKLRDIELLCQSPEIENLPVVGAI 240

Query: 241 RKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLESQKRKSVINFDVDV 300
           RKILYAVDDDASVVAEAQAM+S HQKE  ++LSPIAEVSDEKL+LESQKRK++IN DVDV
Sbjct: 241 RKILYAVDDDASVVAEAQAMVSAHQKERTNILSPIAEVSDEKLTLESQKRKNIINLDVDV 300

Query: 301 VGMTTLSPRRRVSDASDVHCSGSPLMTY 329
            G+TTLSPR+RVSDASDVHCSGSPLMTY
Sbjct: 301 AGITTLSPRQRVSDASDVHCSGSPLMTY 327

[Close]
BLAST of Carg00822 vs. TAIR 10
Match: AT5G67270.1 (end binding protein 1C )

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-111
Identity = 228/341 (66.86%), Postives = 261/341 (76.54%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGRSEILAWINSTL LNLSKVEEACSGAVHCQLMD+ HPG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDS NGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 VLQCYNALERREASKGGKDASRKSTTSHSSAKGSTAAA-SRAQVSQNARRNE-ASVNSGN 180
               Y+ALERREASKGGK+A++++  +  S K S+++A  R   S   R++E  S N+G 
Sbjct: 121 -QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTGT 180

Query: 181 QVANV------SKP---PSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSP 240
             ++       SKP    S  V  YDE+IT LKL IDSLEKERDFYFSKLRD+EILCQ+P
Sbjct: 181 HHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQNP 240

Query: 241 QIESLPAVGAIRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLS--LES 300
             E LP VG+I++ILYA D +    AE Q             LSPIAE S+E+ +   ES
Sbjct: 241 DTEHLPLVGSIKRILYAADGEDVGAAETQT------------LSPIAEGSEERRNSVTES 300

Query: 301 QKRKSVINFDVDVVGMTTLSPRRRVSDASDVHCSG-SPLMT 328
           QKRK ++N DVDV  +TTLSPR+R+SDASDV CSG SPL+T
Sbjct: 301 QKRKLIVNLDVDVAAITTLSPRQRLSDASDVKCSGSSPLLT 328

[Close]
BLAST of Carg00822 vs. TAIR 10
Match: AT5G62500.1 (end binding protein 1B )

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-76
Identity = 153/273 (56.04%), Postives = 199/273 (72.89%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL+WIN  LHLNLS++EEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NF+AK+EYEMIQNYKV+Q+VF KLKITK +EV++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VL-QCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQ 180
           ++ + YN +ERR  S+GG++          S KGS+  +   Q +     +   V + N+
Sbjct: 121 IMNENYNPVERR--SRGGRE---------KSVKGSSKISKSLQTN---NMHHPPVATSNK 180

Query: 181 VANVSKPPSNG----------VSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSP 240
            A   +  S+G          V    +++  LK+S+D LEKERDFYFSKLRDIEILCQ+P
Sbjct: 181 PAGPKQAKSHGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTP 240

Query: 241 QIESLPAVGAIRKILYAVDDDASVVAEAQAMLS 263
           +++ LP V A++KILYA D + SV+ EAQ  L+
Sbjct: 241 ELDDLPIVVAVKKILYATDANESVLEEAQECLN 259

[Close]
BLAST of Carg00822 vs. TAIR 10
Match: AT3G47690.1 (microtubule end binding protein EB1A )

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-76
Identity = 155/287 (54.01%), Postives = 202/287 (70.38%), Query Frame = 0 

Query: 1   MATNIGMMDSAYFVGRSEILAWINSTLHLNLSKVEEACSGAVHCQLMDAAHPGMVPMHKV 60
           MATNIGMMDSAYFVGR+EIL WIN  LHLNLS+VEEA SGAV CQ++D   PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSANGG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKITK +E+++LVKGRPLDNLEF+QW+KR+CDS NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 VL-QCYNALERREASKGGKDASRKSTTSHSSAKGSTAAASRAQVSQNARRNEASVNSGNQ 180
           ++ + YN +ERR  S+ GK+          S KGS       Q + N     +S    ++
Sbjct: 121 IMNENYNPVERR--SRNGKE---------RSVKGSNKIPKSLQTNNNHPPPNSSSVGLSK 180

Query: 181 VANVSKPPSNGVSPYDEQITTLKLSIDSLEKERDFYFSKLRDIEILCQSPQIESLPAVGA 240
            +      +  V    +++  LK+S D LEKERDFYFSKLRD+EILCQ+P+++ LP V A
Sbjct: 181 ASGPKSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVA 240

Query: 241 IRKILYAVDDDASVVAEAQAMLSVHQKETIDLLSPIAEVSDEKLSLE 287
           ++KILYA D + S + +AQ  L+    +++ +    AE + E+L  E
Sbjct: 241 VKKILYATDANESALEDAQEYLN----QSLGVEDDEAEGNGEQLEEE 272

The following BLAST results are available for this feature:
BLAST of Carg00822 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034322.12.3e-176100.00Microtubule-associated protein RP/EB family member 1C, partial [Cucurbita argyro... [more]
XP_022950119.19.5e-17599.09microtubule-associated protein RP/EB family member 1C-like [Cucurbita moschata] ... [more]
XP_022977562.13.6e-17498.78microtubule-associated protein RP/EB family member 1C-like [Cucurbita maxima][more]
XP_023544531.18.0e-17498.78microtubule-associated protein RP/EB family member 1C-like [Cucurbita pepo subsp... [more]
XP_038883112.15.4e-16292.10microtubule-associated protein RP/EB family member 1C-like [Benincasa hispida][more]
BLAST of Carg00822 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGQ62.9e-11066.86Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX... [more]
Q9FJJ52.3e-7556.04Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX... [more]
Q7XJ606.8e-7554.01Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX... [more]
Q9UPY83.5e-3937.73Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=... [more]
Q6PER34.6e-3937.73Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN... [more]
BLAST of Carg00822 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GEV84.6e-17599.09microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita moschata... [more]
A0A6J1IIV41.7e-17498.78microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita maxima O... [more]
A0A5D3CM171.7e-16191.19Microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo var. ... [more]
A0A1S3B1G31.7e-16191.19microtubule-associated protein RP/EB family member 1C-like OS=Cucumis melo OX=36... [more]
A0A6J1BTB11.0e-15888.72microtubule-associated protein RP/EB family member 1C-like OS=Momordica charanti... [more]
BLAST of Carg00822 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G67270.12.1e-11166.86end binding protein 1C [more]
AT5G62500.11.7e-7656.04end binding protein 1B [more]
AT3G47690.14.8e-7654.01microtubule end binding protein EB1A [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001715Calponin homology domainPFAMPF00307CHcoord: 16..109
e-value: 9.4E-11
score: 41.9
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 13..115
score: 17.652222
NoneNo IPR availableGENE3D1.20.5.1430coord: 191..268
e-value: 2.0E-22
score: 80.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..193
NoneNo IPR availablePANTHERPTHR10623:SF29MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1Bcoord: 1..266
IPR004953EB1, C-terminalPFAMPF03271EB1coord: 208..246
e-value: 5.7E-19
score: 68.1
IPR004953EB1, C-terminalPROSITEPS51230EB1_Ccoord: 183..253
score: 15.034698
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 6..133
e-value: 1.5E-52
score: 179.1
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 5..130
IPR027328Microtubule-associated protein RP/EBPANTHERPTHR10623MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBERcoord: 1..266
IPR036133EB1, C-terminal domain superfamilySUPERFAMILY140612EB1 dimerisation domain-likecoord: 194..250

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00822-RACarg00822-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:1904825 protein localization to microtubule plus-end
biological_process GO:0031110 regulation of microtubule polymerization or depolymerization
biological_process GO:0051225 spindle assembly
biological_process GO:0009652 thigmotropism
cellular_component GO:0005881 cytoplasmic microtubule
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0035371 microtubule plus-end
cellular_component GO:0051233 spindle midzone
molecular_function GO:0051010 microtubule plus-end binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005515 protein binding