Carg00735 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00735
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	TPR_REGION domain-containing protein
Location	Carg_Chr03: 6468906 .. 6469541 (-)
RNA-Seq Expression	Carg00735
Synteny	Carg00735

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAAGAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGGCACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAATCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACGACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAGATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA

mRNA sequence

ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAAGAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGGCACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAATCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACGACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAGATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA

Coding sequence (CDS)

ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAAGAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGGCACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAATCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACGACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAGATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA

Protein sequence

MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPESAPAREALGRLN

Homology

[Close]

BLAST of Carg00735 vs. NCBI nr
Match: KAG6604067.1 (hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.6 bits (1002), Expect = 8.7e-105
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 47  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 106

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC
Sbjct: 107 TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 166

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 167 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 226

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEARQAFEKALTVDPESAPAREALGRLN
Sbjct: 227 KMKDEARQAFEKALTVDPESAPAREALGRLN 257

[Close]

BLAST of Carg00735 vs. NCBI nr
Match: XP_022950520.1 (uncharacterized protein LOC111453603 [Cucurbita moschata] >KAG7034235.1 hypothetical protein SDJN02_03962, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390.6 bits (1002), Expect = 8.7e-105
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC
Sbjct: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEARQAFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Carg00735 vs. NCBI nr
Match: XP_022978825.1 (uncharacterized protein LOC111478668 [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 3.7e-103
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           MMSPEA+IQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MMSPEAVIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
            SQQSQSMDYAKKA+NEAETALSLSPRDPASHILKALALNHMGHHSSALKSLD+ALSPPC
Sbjct: 61  ISQQSQSMDYAKKAVNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDIALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEARQAFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Carg00735 vs. NCBI nr
Match: XP_023543662.1 (uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           M+SPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MVSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGH SSALKSLDVALSPPC
Sbjct: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHQSSALKSLDVALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEAR+AFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEAREAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Carg00735 vs. NCBI nr
Match: XP_022132455.1 (uncharacterized protein LOC111005306 [Momordica charantia])

HSP 1 Score: 345.1 bits (884), Expect = 4.2e-91
Identity = 186/210 (88.57%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARST
Sbjct: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180

Query: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 212
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 210

[Close]

BLAST of Carg00735 vs. ExPASy TrEMBL
Match: A0A6J1GFZ7 (uncharacterized protein LOC111453603 OS=Cucurbita moschata OX=3662 GN=LOC111453603 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.2e-105
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC
Sbjct: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEARQAFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Carg00735 vs. ExPASy TrEMBL
Match: A0A6J1IRB2 (uncharacterized protein LOC111478668 OS=Cucurbita maxima OX=3661 GN=LOC111478668 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           MMSPEA+IQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS
Sbjct: 1   MMSPEAVIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
            SQQSQSMDYAKKA+NEAETALSLSPRDPASHILKALALNHMGHHSSALKSLD+ALSPPC
Sbjct: 61  ISQQSQSMDYAKKAVNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDIALSPPC 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180
           LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK
Sbjct: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWK 180

Query: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 212
           KMKDEARQAFEKALTVDPESAPAREALGRLN
Sbjct: 181 KMKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Carg00735 vs. ExPASy TrEMBL
Match: A0A6J1BSI1 (uncharacterized protein LOC111005306 OS=Momordica charantia OX=3673 GN=LOC111005306 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91
Identity = 186/210 (88.57%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARST
Sbjct: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180

Query: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 212
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 210

[Close]

BLAST of Carg00735 vs. ExPASy TrEMBL
Match: A0A6J5V4N0 (TPR_REGION domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39230 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 134/212 (63.21%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF++G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
             ++QS  +AK AL EAE AL+LSPRDP  HILKALAL+ +GH +SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYE 181
           KSLSE+E  +ALVKRAELKI +NR+RR+DSAVEDL+QAVSL    GDD  +FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVSLSRGEGDDVTSFCLLGQCYE 180

Query: 182 WKKMKDEARQAFEKALTVDPESAPAREALGRL 211
           WK MK+EAR+AFE+AL  +P S  AR+ L RL
Sbjct: 181 WKGMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]

BLAST of Carg00735 vs. ExPASy TrEMBL
Match: A0A5E4EZ55 (PREDICTED OS=Prunus dulcis OX=3755 GN=ALMOND_2B009325 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.4e-62
Identity = 133/212 (62.74%), Postives = 167/212 (78.77%), Query Frame = 0


Query: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61
           M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF++G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121
             ++QS  +AK AL EAE AL+LSPRDP  HILKALAL+ +GH +SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYE 181
           KSLSE+E  +ALVKRAELKI +NR+RR+DSAVEDL+QAV L    GDD  +FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVRLSRGEGDDVTSFCLLGQCYE 180

Query: 182 WKKMKDEARQAFEKALTVDPESAPAREALGRL 211
           WK MK+EAR+AFE+AL  +P S  AR+ L RL
Sbjct: 181 WKGMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]

BLAST of Carg00735 vs. TAIR 10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-46
Identity = 106/202 (52.48%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 1   MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS 60
           M + E +IQ A+ +LT     A++ LS+R   K R K+RA LQ+ R  ++ + LLARAR+
Sbjct: 1   MATTETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARART 60

Query: 61  TSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPC 120
           T ++SQS   AK AL EA+  +++SP D A HI++ALAL+ +GHH+SALKS D+AL+ P 
Sbjct: 61  TPKKSQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPR 120

Query: 121 LKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSL--GGDDTKAFCLLGQCYE 180
           LKSLS  E A ALVKRAE+K+AVNR+RR+DSAVEDL +AV L  G D  + F LLG+CYE
Sbjct: 121 LKSLSVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYE 180

Query: 181 WKKMKDEARQAFEKALTVDPES 201
           +K +K++A+ AF +AL   P S
Sbjct: 181 FKGLKEKAQWAFNEALKAQPSS 202

The following BLAST results are available for this feature:

BLAST of Carg00735 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604067.1	8.7e-105	100.00	hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950520.1	8.7e-105	100.00	uncharacterized protein LOC111453603 [Cucurbita moschata] >KAG7034235.1 hypothet...	[more]
XP_022978825.1	3.7e-103	98.10	uncharacterized protein LOC111478668 [Cucurbita maxima]	[more]
XP_023543662.1	4.8e-103	98.58	uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]	[more]
XP_022132455.1	4.2e-91	88.57	uncharacterized protein LOC111005306 [Momordica charantia]	[more]

BLAST of Carg00735 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg00735 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFZ7	4.2e-105	100.00	uncharacterized protein LOC111453603 OS=Cucurbita moschata OX=3662 GN=LOC1114536...	[more]
A0A6J1IRB2	1.8e-103	98.10	uncharacterized protein LOC111478668 OS=Cucurbita maxima OX=3661 GN=LOC111478668...	[more]
A0A6J1BSI1	2.0e-91	88.57	uncharacterized protein LOC111005306 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J5V4N0	1.2e-62	63.21	TPR_REGION domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCU...	[more]
A0A5E4EZ55	4.4e-62	62.74	PREDICTED OS=Prunus dulcis OX=3755 GN=ALMOND_2B009325 PE=4 SV=1	[more]

BLAST of Carg00735 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65520.1	2.0e-46	52.48	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 167..200 e-value: 5.7E-6 score: 35.8
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 167..200 score: 10.7384
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 139..211 e-value: 7.8E-12 score: 47.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 15..138 e-value: 3.3E-7 score: 32.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..208
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 168..199 e-value: 1.4E-7 score: 31.1
None	No IPR available	PANTHER	PTHR26312:SF163	SUBFAMILY NOT NAMED	coord: 5..209
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 5..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00735-RA	Carg00735-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding