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Carg00580 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATAAGTGATTGATACCTTGTTGCTCAAGTTGGGATTTTTCTCTATAATTCCCGCTGCAAGCAGAGCGCGAGAGGGACAGAACGAGCTGAAGCAAGAGAACAATGGCTAGATACGATAGGGCAATCACTGTCTTCTCCCCTGACGGTCATTTGTTTCAAGTCGAATACGCTCTCGAAGCTGTGCGGAAGGGTAACGCCGCCGTTGGTGTTCGTGGCACCGATACTATCGTCCTCGGTGTTGAGAAGAAGGCTGCGCCTAAGCTCCAAGACTCCAGGTACTTCCGTTTCATTGTCAGTTCAAGCTTGTGGGTGGATCTATTTTAAATGGGGAAATGGAATGTGAGGGTCTGAGATTTACTGATTTCTTTTGGGATTCTGTATGGTTTAGTGTTTGAATTTTTTGATCGGTTTTGTGGTTTTCTGATTAAATGCCATGGTATGTTTTACATAATTTATCTGATCGGGCATGGTGCACTGTAGAAATTGGGATTTGGAATTCCCTTCCAAAATGGCTGATGGCTGGCGTTTAATGATTTTGACGATGTTTGTTTTCTATATTCCAATTGTTCAACTGGTGGATAGTAGTTCGAGTCATCCCGTTATCTGCTTATTTCATGCGATTTTGTTCTATTCTGGTGATATCATTTCAATAAATGGCGCCTGGTGGTGTCCCTGCTCAACATTGCTGGTTTGTTGTGCTCGTTGGACTGCTTGCTTTGCTATACTAAGATGACTACGTTTTATGCCAATAATCTCGGTATCAGGACTAATCATCTTGGCTGAACAAACGCCCATGTTCTATGTCCTTACCATAATTTGTAACTGATGGAGCATTTTTCATACATAAATTCAGTCAAATAACCATTACTGATATTCTCCTTTTATTTTCAGATCTGTGAGGAAGATTGTGAATCTTGATGACCATATTGCACTAGCTTGTGCTGGGCTCAAGGCAGATGCACGTGTCTTGATAAATAGGGCTCGGATCGAGTGTCAAAGCCATCGGCTTACAGTTGAGGATCCAGTAACTGTTGAGTATATTACTCGTTACATTGCAGGTCTCCAACAGAAGTACACCCAAAGTGGTGGAGTGAGACCGTTTGGCCTTTCAACCTTGATTATAGGTTTTGACCCATATACTGGCACACCCTCACTGTACCAGACAGATCCTTCTGGGACATTTTCAGCTTGGAAAGCAAATGCAACCGGTAGAAACTCCAATTCGATAAGGGAATTCTTAGAGAAAAATTATAAGGAAACTTCTGGTCAGGAAACTGTGAAGCTTGCAATCCGTGCATTGCTTGAGGTGAGCTCACTAATGTTTTTTGTTAGGTTTTCCTCGTATATGTTTGTAAAGTCGCTTCGCTTTCCTTTTTATTAGGAAGAATCCAATTCTCACATGTTCTTTTGTTTGGTCATTCTCTCAATTTCTTGGTGCTGCTTGAAATTGCATATACCATTTATACTGCCTTACATTGGTTTCATGGGCATCTCGCAGTAACTTGCTTTCCAATTTTCCTGTCTCTCATTAAGTTCTTTGAATCTAACTGACGAGTTACGTGCTAGAGTCGATTAATTCCTTCACTGCGCCAGTGTCATTTTGTGCTGCGCCAGTGACTAACTTTGAAATTTGAAGTTGAGTTTCTAGATTTTGTTTGGAAACTAATGACCTTACTTGAAACTATTGTCCTTGAGTTCGAAACATGTTAGTTAGGAAGCCACCATCTTTATATTCACACATTTCCTATAGTTACTTTCCTGAAGTTATTTGGTAATTAATAGACATTACCATTTCAAGTAGCTCTTGGATGCATGCTACTTATGGCTAAATACGTGTTTTTTTGTTGTTGTGCAATTATAGCACTCTTACATAGAATACACCGAATCGGACAGATATACACAAAAGGATTTCTAAGCTGAACTTTAGCAGGGGTTTAAACATACGTGGGTATAAATCTTCAGAAACATTTTGCATTTTCTAAGGTGGAACTGTTTAGAAAAACTTAACAAATTGGGCGTTTAAGGATAACTTCCGAAAGCGCTATTATCGAATGAGAGCTTAACTGAGAACGTTCAAGGGTAACTCTCCAAAGTGTTAGTACTGTATGAGAACTTAGCAGAGAAGAAACCTAGCTCTCCAGTAGCTGAAATCTGTCGTCCTGCCCCTGAGTACAGCAAAAGTTCCTAGGTTAAGAAGTTGAGAGCATCCTCCATCTCTTGATCATTCAGCTGTCTCCCAAACTCCCAACTTTCTTTTACACTACCCGTAGATTTCCCCACCCTTATTCATTGAAGGTAAGTGCGTAATATTAATATATAATAATAACACAGCTAGCAAGAATAAACGAGTATACAACTACTTTTGTTGTATAAATTGAATTGACATCTAAAAATACACGACGTAGATTCACCGAAGTTCTTATGACTTTTATATCTAAATAGCTCTTGGGGTGAATAGGGTTATCAATGTTTGGTATCTTTAGATGTCTAAATATCTCTGCTTGATTCCTTATTCCATTTCTGGCGCAAGGGCTATTGTAAGGAACAAAACATGTAGATTTTAGGAATTATGAACTCCTCAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGACTTCGCTTTTATTTTCTCCCGAAGGTCTCATGCAGATAATGTTCCTTACTTGTAAACCCATATGATCATTTCCTTAGTTAGCCAATGTGAGACTCCCTCCCAACGATCCTCAATCCTAGATGGGCATGTAGTTTTTCTTGTGGACGTTAAATGTTCGCACAACAATGTTACATGTCATACACGACCAAGTCGAAGGAAAAACCATGAATTCTTTTTTCTCTTAAATACAGGTTGTTGAGAGTGGTGGAAAGAACATAGAGGTCGCCGTGATGAGAAAGGAGCATGGACTGCGACAATTGGAAGAAGCTGAAATTGATGCTCTCGTTGCAGAAATTGAAGCAGAAAAGGCAGCTGCTGAGGCTGCAAAAAAAGCTCCTCCCAAGGAAACATGATCCCTTTTCTTACATGTTTTCCAGGCATTATTTCTTAATCCTTTACTTTTCTGGTGGAGTTAGTGAATAATCTTATGATTCTGAACCTTCAAACTTGTACCACCATTTTGTGCATCGTTGACACAAGGTGGCCGTAGTTGTAGCCTCTGAAAAATGCCTGTTTATCCTCTCAGCCTCTTTCTCAACCTCTTTCAATGTGATAGCAAAACCATCTGATTTTGTGGATTTTGTGTATTATTGTTGCTGAGATCTGAGTAGAGGAGTTACTCTAGAAATTGATCCATGCATGAGTGCTTTGAAAAATTATTTAAAATTTAATTTCTTATTTATGTCTTCATAAATT AAAAATAAGTGATTGATACCTTGTTGCTCAAGTTGGGATTTTTCTCTATAATTCCCGCTGCAAGCAGAGCGCGAGAGGGACAGAACGAGCTGAAGCAAGAGAACAATGGCTAGATACGATAGGGCAATCACTGTCTTCTCCCCTGACGGTCATTTGTTTCAAGTCGAATACGCTCTCGAAGCTGTGCGGAAGGGTAACGCCGCCGTTGGTGTTCGTGGCACCGATACTATCGTCCTCGGTGTTGAGAAGAAGGCTGCGCCTAAGCTCCAAGACTCCAGATCTGTGAGGAAGATTGTGAATCTTGATGACCATATTGCACTAGCTTGTGCTGGGCTCAAGGCAGATGCACGTGTCTTGATAAATAGGGCTCGGATCGAGTGTCAAAGCCATCGGCTTACAGTTGAGGATCCAGTAACTGTTGAGTATATTACTCGTTACATTGCAGGTCTCCAACAGAAGTACACCCAAAGTGGTGGAGTGAGACCGTTTGGCCTTTCAACCTTGATTATAGGTTTTGACCCATATACTGGCACACCCTCACTGTACCAGACAGATCCTTCTGGGACATTTTCAGCTTGGAAAGCAAATGCAACCGGTAGAAACTCCAATTCGATAAGGGAATTCTTAGAGAAAAATTATAAGGAAACTTCTGGTCAGGAAACTGTGAAGCTTGCAATCCGTGCATTGCTTGAGGTTGTTGAGAGTGGTGGAAAGAACATAGAGGTCGCCGTGATGAGAAAGGAGCATGGACTGCGACAATTGGAAGAAGCTGAAATTGATGCTCTCGTTGCAGAAATTGAAGCAGAAAAGGCAGCTGCTGAGGCTGCAAAAAAAGCTCCTCCCAAGGAAACATGATCCCTTTTCTTACATGTTTTCCAGGCATTATTTCTTAATCCTTTACTTTTCTGGTGGAGTTAGTGAATAATCTTATGATTCTGAACCTTCAAACTTGTACCACCATTTTGTGCATCGTTGACACAAGGTGGCCGTAGTTGTAGCCTCTGAAAAATGCCTGTTTATCCTCTCAGCCTCTTTCTCAACCTCTTTCAATGTGATAGCAAAACCATCTGATTTTGTGGATTTTGTGTATTATTGTTGCTGAGATCTGAGTAGAGGAGTTACTCTAGAAATTGATCCATGCATGAGTGCTTTGAAAAATTATTTAAAATTTAATTTCTTATTTATGTCTTCATAAATT ATGGCTAGATACGATAGGGCAATCACTGTCTTCTCCCCTGACGGTCATTTGTTTCAAGTCGAATACGCTCTCGAAGCTGTGCGGAAGGGTAACGCCGCCGTTGGTGTTCGTGGCACCGATACTATCGTCCTCGGTGTTGAGAAGAAGGCTGCGCCTAAGCTCCAAGACTCCAGATCTGTGAGGAAGATTGTGAATCTTGATGACCATATTGCACTAGCTTGTGCTGGGCTCAAGGCAGATGCACGTGTCTTGATAAATAGGGCTCGGATCGAGTGTCAAAGCCATCGGCTTACAGTTGAGGATCCAGTAACTGTTGAGTATATTACTCGTTACATTGCAGGTCTCCAACAGAAGTACACCCAAAGTGGTGGAGTGAGACCGTTTGGCCTTTCAACCTTGATTATAGGTTTTGACCCATATACTGGCACACCCTCACTGTACCAGACAGATCCTTCTGGGACATTTTCAGCTTGGAAAGCAAATGCAACCGGTAGAAACTCCAATTCGATAAGGGAATTCTTAGAGAAAAATTATAAGGAAACTTCTGGTCAGGAAACTGTGAAGCTTGCAATCCGTGCATTGCTTGAGGTTGTTGAGAGTGGTGGAAAGAACATAGAGGTCGCCGTGATGAGAAAGGAGCATGGACTGCGACAATTGGAAGAAGCTGAAATTGATGCTCTCGTTGCAGAAATTGAAGCAGAAAAGGCAGCTGCTGAGGCTGCAAAAAAAGCTCCTCCCAAGGAAACATGA MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKAAPKLQDSRSVRKIVNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPYTGTPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEVAVMRKEHGLRQLEEAEIDALVAEIEAEKAAAEAAKKAPPKET Homology
BLAST of Carg00580 vs. NCBI nr
Match: KAG7034081.1 (Proteasome subunit alpha type-7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 477.6 bits (1228), Expect = 6.4e-131 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Carg00580 vs. NCBI nr
Match: XP_022950808.1 (proteasome subunit alpha type-7-like [Cucurbita moschata] >XP_022977429.1 proteasome subunit alpha type-7-like [Cucurbita maxima] >XP_023545017.1 proteasome subunit alpha type-7-like [Cucurbita pepo subsp. pepo] >KAG6603901.1 Proteasome subunit alpha type-7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Carg00580 vs. NCBI nr
Match: XP_004134855.1 (proteasome subunit alpha type-7 [Cucumis sativus] >KGN48932.1 hypothetical protein Csa_003165 [Cucumis sativus]) HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-129 Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 0
BLAST of Carg00580 vs. NCBI nr
Match: XP_022133141.1 (proteasome subunit alpha type-7 [Momordica charantia]) HSP 1 Score: 471.5 bits (1212), Expect = 4.6e-129 Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of Carg00580 vs. NCBI nr
Match: XP_008440840.1 (PREDICTED: proteasome subunit alpha type-7 [Cucumis melo] >KAA0025662.1 proteasome subunit alpha type-7 [Cucumis melo var. makuwa] >TYK12535.1 proteasome subunit alpha type-7 [Cucumis melo var. makuwa]) HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128 Identity = 245/249 (98.39%), Postives = 246/249 (98.80%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy Swiss-Prot
Match: Q9SXU1 (Proteasome subunit alpha type-7 OS=Cicer arietinum OX=3827 GN=PAD1 PE=2 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 9.0e-128 Identity = 235/249 (94.38%), Postives = 245/249 (98.39%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy Swiss-Prot
Match: O24030 (Proteasome subunit alpha type-7 OS=Solanum lycopersicum OX=4081 GN=PAD1 PE=2 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 1.9e-125 Identity = 230/243 (94.65%), Postives = 239/243 (98.35%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy Swiss-Prot
Match: O24616 (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana OX=3702 GN=PAD2 PE=1 SV=2) HSP 1 Score: 441.4 bits (1134), Expect = 6.7e-123 Identity = 229/250 (91.60%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy Swiss-Prot
Match: A2YXU2 (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_029135 PE=2 SV=2) HSP 1 Score: 436.0 bits (1120), Expect = 2.8e-121 Identity = 223/249 (89.56%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy Swiss-Prot
Match: Q6YT00 (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0548900 PE=2 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 2.8e-121 Identity = 223/249 (89.56%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy TrEMBL
Match: A0A6J1IRC6 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111477775 PE=3 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 5.8e-130 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy TrEMBL
Match: A0A6J1GFX3 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111453804 PE=3 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 5.8e-130 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy TrEMBL
Match: A0A0A0KKR6 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_6G507070 PE=3 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129 Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy TrEMBL
Match: A0A6J1BU65 (Proteasome subunit alpha type OS=Momordica charantia OX=3673 GN=LOC111005816 PE=3 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.2e-129 Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of Carg00580 vs. ExPASy TrEMBL
Match: A0A5A7SKK4 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001160 PE=3 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 6.5e-129 Identity = 245/249 (98.39%), Postives = 246/249 (98.80%), Query Frame = 0
BLAST of Carg00580 vs. TAIR 10
Match: AT5G66140.1 (proteasome alpha subunit D2 ) HSP 1 Score: 441.4 bits (1134), Expect = 4.7e-124 Identity = 229/250 (91.60%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of Carg00580 vs. TAIR 10
Match: AT3G51260.1 (20S proteasome alpha subunit PAD1 ) HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-121 Identity = 225/250 (90.00%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of Carg00580 vs. TAIR 10
Match: AT3G51260.2 (20S proteasome alpha subunit PAD1 ) HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-118 Identity = 221/249 (88.76%), Postives = 233/249 (93.57%), Query Frame = 0
BLAST of Carg00580 vs. TAIR 10
Match: AT3G22110.1 (20S proteasome alpha subunit C1 ) HSP 1 Score: 169.9 bits (429), Expect = 2.7e-42 Identity = 84/200 (42.00%), Postives = 130/200 (65.00%), Query Frame = 0
BLAST of Carg00580 vs. TAIR 10
Match: AT1G16470.1 (proteasome subunit PAB1 ) HSP 1 Score: 162.9 bits (411), Expect = 3.2e-40 Identity = 90/234 (38.46%), Postives = 141/234 (60.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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