Carg00541 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00541
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	C2H2-type domain-containing protein
Location	Carg_Chr03: 5520871 .. 5521533 (-)
RNA-Seq Expression	Carg00541
Synteny	Carg00541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAGGAATGAAGTTATCGGAGATCCCCTTGTTGCTAATTTGATGGAAAGGGACCATAACGAAAGCTCCCCGGAAAACTCCACATCCCATGGCGGCGGCGGCGGCGACACCCCTCCCATGACTCTCACCAACACCCCTGACGATGTCGTAGTGTCGTCTTCCTTCCCAGTGCCTCCTACGATGACATTCGACATGGCCCCATATTCTTCGCCAGAGGCTTCTGGGAGGAAGAGAGGTCGAGCCGAGCAACATGTAGGAGGGTCGAGTTGTGGCAGTGGGCAAAAAGGGAAGAAAAAAGGAGAATTGATTGACCCACCCTCGACCGACCCGAAATGTGCCACTTGTGGCAAGGCTTTCGGGTCGTGGAAGGCGGTGTTTGGGCACTTGCGATCGCACCCTGAGCGGGACTATCGCGGTGCCTTCCCACCGCCAAAAGTTTGGGAGGAGATGCTTCAACAAGAAGCTAGACAAGGTAGTAGTGGGACGACGATTGGTTGCAGTGTTGGAGGCGAGATGGGGATGTCTCCTCCGTCCGGTAGGGGTATCGGAATTGATCTTAACGACCCAGACGAGCAAGGGGCTCGTAGGGAGGGATTCCCTTTTGATCTCAATATGCCTGCGCCGGAGAATGAGGAGGACGACGACAATAATGAAAGTTAA

mRNA sequence

ATGTGTAGGAATGAAGTTATCGGAGATCCCCTTGTTGCTAATTTGATGGAAAGGGACCATAACGAAAGCTCCCCGGAAAACTCCACATCCCATGGCGGCGGCGGCGGCGACACCCCTCCCATGACTCTCACCAACACCCCTGACGATGTCGTAGTGTCGTCTTCCTTCCCAGTGCCTCCTACGATGACATTCGACATGGCCCCATATTCTTCGCCAGAGGCTTCTGGGAGGAAGAGAGGTCGAGCCGAGCAACATGTAGGAGGGTCGAGTTGTGGCAGTGGGCAAAAAGGGAAGAAAAAAGGAGAATTGATTGACCCACCCTCGACCGACCCGAAATGTGCCACTTGTGGCAAGGCTTTCGGGTCGTGGAAGGCGGTGTTTGGGCACTTGCGATCGCACCCTGAGCGGGACTATCGCGGTGCCTTCCCACCGCCAAAAGTTTGGGAGGAGATGCTTCAACAAGAAGCTAGACAAGGTAGTAGTGGGACGACGATTGGTTGCAGTGTTGGAGGCGAGATGGGGATGTCTCCTCCGTCCGGTAGGGGTATCGGAATTGATCTTAACGACCCAGACGAGCAAGGGGCTCGTAGGGAGGGATTCCCTTTTGATCTCAATATGCCTGCGCCGGAGAATGAGGAGGACGACGACAATAATGAAAGTTAA

Coding sequence (CDS)

ATGTGTAGGAATGAAGTTATCGGAGATCCCCTTGTTGCTAATTTGATGGAAAGGGACCATAACGAAAGCTCCCCGGAAAACTCCACATCCCATGGCGGCGGCGGCGGCGACACCCCTCCCATGACTCTCACCAACACCCCTGACGATGTCGTAGTGTCGTCTTCCTTCCCAGTGCCTCCTACGATGACATTCGACATGGCCCCATATTCTTCGCCAGAGGCTTCTGGGAGGAAGAGAGGTCGAGCCGAGCAACATGTAGGAGGGTCGAGTTGTGGCAGTGGGCAAAAAGGGAAGAAAAAAGGAGAATTGATTGACCCACCCTCGACCGACCCGAAATGTGCCACTTGTGGCAAGGCTTTCGGGTCGTGGAAGGCGGTGTTTGGGCACTTGCGATCGCACCCTGAGCGGGACTATCGCGGTGCCTTCCCACCGCCAAAAGTTTGGGAGGAGATGCTTCAACAAGAAGCTAGACAAGGTAGTAGTGGGACGACGATTGGTTGCAGTGTTGGAGGCGAGATGGGGATGTCTCCTCCGTCCGGTAGGGGTATCGGAATTGATCTTAACGACCCAGACGAGCAAGGGGCTCGTAGGGAGGGATTCCCTTTTGATCTCAATATGCCTGCGCCGGAGAATGAGGAGGACGACGACAATAATGAAAGTTAA

Protein sequence

MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPPTMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSGRGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES

Homology

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BLAST of Carg00541 vs. NCBI nr
Match: KAG7034043.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.6 bits (1163), Expect = 1.9e-123
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60
           MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP
Sbjct: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60

Query: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120
           TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF
Sbjct: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120

Query: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180
           GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG
Sbjct: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180

Query: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 221
           RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES
Sbjct: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 220

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BLAST of Carg00541 vs. NCBI nr
Match: XP_022950356.1 (uncharacterized protein LOC111453468 [Cucurbita moschata])

HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60
           MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGG TPPMTLTNTPDDVVVSSSFPVPP
Sbjct: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGYTPPMTLTNTPDDVVVSSSFPVPP 60

Query: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120
           TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF
Sbjct: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120

Query: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180
           GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG
Sbjct: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180

Query: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 221
           RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES
Sbjct: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 220

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BLAST of Carg00541 vs. NCBI nr
Match: KAG6603863.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 441.4 bits (1134), Expect = 4.5e-120
Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60
           MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTN+PDDVVVSSSFPVPP
Sbjct: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNSPDDVVVSSSFPVPP 60

Query: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120
           TMTFD APYSSPEASGRKRGRAEQHVGGSS GSGQKGKKKGELIDPPS++PKCATCGKAF
Sbjct: 61  TMTFDTAPYSSPEASGRKRGRAEQHVGGSSSGSGQKGKKKGELIDPPSSNPKCATCGKAF 120

Query: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180
           GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG
Sbjct: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180

Query: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 221
           RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES
Sbjct: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 220

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BLAST of Carg00541 vs. NCBI nr
Match: XP_023544007.1 (zinc finger protein ZAT4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 200/223 (89.69%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60
           MCRNEVIGDPLVANLMERD ++SSPENSTSH   GGDTPPMTL  TPDDV+VSSSF +PP
Sbjct: 1   MCRNEVIGDPLVANLMERDRSQSSPENSTSH--DGGDTPPMTLIGTPDDVIVSSSFSMPP 60

Query: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120
           TMTFDMAP SSPE  GRKRGR EQHVGGSS GSG KGKKKGELIDPPSTDPKCATCGKAF
Sbjct: 61  TMTFDMAPSSSPETYGRKRGRVEQHVGGSSSGSGHKGKKKGELIDPPSTDPKCATCGKAF 120

Query: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180
           GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSG TIG SVGGEMGMSPPSG
Sbjct: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGMTIGRSVGGEMGMSPPSG 180

Query: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAP---ENEEDDDNNES 221
           RGIGIDLNDPDEQGARREGFPFDLNMPAP   E+EEDDDNNES
Sbjct: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPEDEEDEEDDDNNES 221

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BLAST of Carg00541 vs. NCBI nr
Match: XP_022977283.1 (uncharacterized protein LOC111477651 [Cucurbita maxima])

HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 198/224 (88.39%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60
           MC NEVIGDPLVANLMERDHNESSPENSTSHG GG DTPPMTLT+T D+VVVSSSFP+PP
Sbjct: 1   MCTNEVIGDPLVANLMERDHNESSPENSTSHGSGGDDTPPMTLTDTLDNVVVSSSFPIPP 60

Query: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120
           T TFD+AP SSPE  GRKRGRAEQHVGGSS GSG KGKKKGELIDPPSTDPKCATCGKAF
Sbjct: 61  TTTFDLAPSSSPETYGRKRGRAEQHVGGSSSGSGHKGKKKGELIDPPSTDPKCATCGKAF 120

Query: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180
           GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMS  SG
Sbjct: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSSSSG 180

Query: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAP----ENEEDDDNNES 221
           RGI IDLNDPDEQGAR  GFPFDLNMPAP    E EE+DD NES
Sbjct: 181 RGIRIDLNDPDEQGARGGGFPFDLNMPAPEKEEEEEEEDDPNES 224

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BLAST of Carg00541 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07
Identity = 36/88 (40.91%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 60  PTMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGK--KKGELIDPPSTDPKCATCG 119
           P + F ++  S   +  +KR +       SS  S  K K  KK +   P  T P C  CG
Sbjct: 26  PNLQFALSS-SYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRP-CTECG 85

Query: 120 KAFGSWKAVFGHLRSHPERDYRGAFPPP 146
           + F SWKA+FGH+R HPER +RG  PPP
Sbjct: 86  RKFWSWKALFGHMRCHPERQWRGINPPP 111

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BLAST of Carg00541 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 32/85 (37.65%), Postives = 39/85 (45.88%), Query Frame = 0


Query: 77  RKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLRSHPER 136
           RKR +   +  GSS  S +         D       C  CGK FGS KA+FGH+R HPER
Sbjct: 31  RKRTKLTNNEVGSSSSSPRPKPVTQPDPDASQIARPCTECGKQFGSLKALFGHMRCHPER 90

Query: 137 DYRGAFPPPKVWEEMLQQEARQGSS 162
            +RG  PP      +    A   SS
Sbjct: 91  QWRGINPPSNFKRRINSNAASSSSS 115

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BLAST of Carg00541 vs. ExPASy TrEMBL
Match: A0A6J1GEL2 (uncharacterized protein LOC111453468 OS=Cucurbita moschata OX=3662 GN=LOC111453468 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60
           MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGG TPPMTLTNTPDDVVVSSSFPVPP
Sbjct: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGYTPPMTLTNTPDDVVVSSSFPVPP 60

Query: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120
           TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF
Sbjct: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120

Query: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180
           GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG
Sbjct: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180

Query: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 221
           RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES
Sbjct: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAPENEEDDDNNES 220

[Close]

BLAST of Carg00541 vs. ExPASy TrEMBL
Match: A0A6J1IPI4 (uncharacterized protein LOC111477651 OS=Cucurbita maxima OX=3661 GN=LOC111477651 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.8e-106
Identity = 198/224 (88.39%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MCRNEVIGDPLVANLMERDHNESSPENSTSHGGGGGDTPPMTLTNTPDDVVVSSSFPVPP 60
           MC NEVIGDPLVANLMERDHNESSPENSTSHG GG DTPPMTLT+T D+VVVSSSFP+PP
Sbjct: 1   MCTNEVIGDPLVANLMERDHNESSPENSTSHGSGGDDTPPMTLTDTLDNVVVSSSFPIPP 60

Query: 61  TMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAF 120
           T TFD+AP SSPE  GRKRGRAEQHVGGSS GSG KGKKKGELIDPPSTDPKCATCGKAF
Sbjct: 61  TTTFDLAPSSSPETYGRKRGRAEQHVGGSSSGSGHKGKKKGELIDPPSTDPKCATCGKAF 120

Query: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSPPSG 180
           GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMS  SG
Sbjct: 121 GSWKAVFGHLRSHPERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMGMSSSSG 180

Query: 181 RGIGIDLNDPDEQGARREGFPFDLNMPAP----ENEEDDDNNES 221
           RGI IDLNDPDEQGAR  GFPFDLNMPAP    E EE+DD NES
Sbjct: 181 RGIRIDLNDPDEQGARGGGFPFDLNMPAPEKEEEEEEEDDPNES 224

[Close]

BLAST of Carg00541 vs. ExPASy TrEMBL
Match: A0A0A0KGW4 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509590 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 134/206 (65.05%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 16  MERDHNESSPENSTSHGGGGGDTPPMTLTNT-PDDVVVSSSFPVPPTMTFDMAPYSSPEA 75
           ME+D +E S  + +S+GG GGDTP   + +T  DDV VSSS PV  ++   +   S  E+
Sbjct: 1   MEKDDHEKSSPSGSSNGGDGGDTPSKAIADTHEDDVAVSSSAPVRSSIDITLT-LSPQES 60

Query: 76  SGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLRSHP 135
            GRKRGR E H GGSS GSGQKGKKKGELIDPPSTDPKCATCGK FGSWKAVFGHLRSHP
Sbjct: 61  YGRKRGRGEDHGGGSSSGSGQKGKKKGELIDPPSTDPKCATCGKIFGSWKAVFGHLRSHP 120

Query: 136 ERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMG----MSPPSGRGIGIDLNDP 195
           ERDYRGAFPPPK+WEEMLQQE  +   G   G S G   G     S PSGRGIGIDLNDP
Sbjct: 121 ERDYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIGIDLNDP 180

Query: 196 DEQGARREGFPFDLNMPAPENEEDDD 217
           + Q   ++ FPFDLN PAPENEE+DD
Sbjct: 181 EAQEGNKDEFPFDLNEPAPENEEEDD 205

[Close]

BLAST of Carg00541 vs. ExPASy TrEMBL
Match: A0A1S3B298 (zinc finger protein ZAT4 OS=Cucumis melo OX=3656 GN=LOC103485364 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.6e-62
Identity = 137/207 (66.18%), Postives = 152/207 (73.43%), Query Frame = 0


Query: 16  MERDHNESSPENSTSHGGGGGDTPPMTLTNT-PDDVVVSSSFPVPPTMTFDMAPYSSPEA 75
           ME+DH++SSP  S++ G GG  TP   +T T  DDV VSSS    P  T D+    SP+ 
Sbjct: 1   MEKDHDKSSPSGSSNGGDGGDHTPSKAITVTHEDDVAVSSS--SAPVRTIDITLTLSPQE 60

Query: 76  S-GRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLRSH 135
           S GRKRGRAE H GGSS GSGQKGKKKGELIDPPST PKCATCGK FGSWKAVFGHLRSH
Sbjct: 61  SYGRKRGRAEDHGGGSSSGSGQKGKKKGELIDPPSTAPKCATCGKTFGSWKAVFGHLRSH 120

Query: 136 PERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMG----MSPPSGRGIGIDLND 195
           PER+YRGAFPPPK+WEEMLQQE  +   G   G S G   G     S PSGRGI IDLND
Sbjct: 121 PEREYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIEIDLND 180

Query: 196 PDEQGARREGFPFDLNMPAPENEEDDD 217
           P+EQ A ++ FPFDLN PAPENEE+DD
Sbjct: 181 PEEQEANKDEFPFDLNEPAPENEEEDD 205

[Close]

BLAST of Carg00541 vs. ExPASy TrEMBL
Match: A0A5D3CPY3 (Zinc finger protein ZAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00630 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 136/207 (65.70%), Postives = 151/207 (72.95%), Query Frame = 0


Query: 16  MERDHNESSPENSTSHGGGGGDTPPMTLTNT-PDDVVVSSSFPVPPTMTFDMAPYSSPEA 75
           ME+DH++SSP  S++ G G   TP   +T T  DDV VSSS    P  T D+    SP+ 
Sbjct: 1   MEKDHDKSSPSGSSNGGDGSDHTPSKAITVTHEDDVAVSSS--SAPVRTIDITLTLSPQE 60

Query: 76  S-GRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLRSH 135
           S GRKRGRAE H GGSS GSGQKGKKKGELIDPPST PKCATCGK FGSWKAVFGHLRSH
Sbjct: 61  SYGRKRGRAEDHGGGSSSGSGQKGKKKGELIDPPSTAPKCATCGKTFGSWKAVFGHLRSH 120

Query: 136 PERDYRGAFPPPKVWEEMLQQEARQGSSGTTIGCSVGGEMG----MSPPSGRGIGIDLND 195
           PER+YRGAFPPPK+WEEMLQQE  +   G   G S G   G     S PSGRGI IDLND
Sbjct: 121 PEREYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIEIDLND 180

Query: 196 PDEQGARREGFPFDLNMPAPENEEDDD 217
           P+EQ A ++ FPFDLN PAPENEE+DD
Sbjct: 181 PEEQEANKDEFPFDLNEPAPENEEEDD 205

[Close]

BLAST of Carg00541 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 66/175 (37.71%), Postives = 87/175 (49.71%), Query Frame = 0


Query: 74  ASGRKRGR------AEQHVGGSSCGSGQKGKKKG-ELIDPPSTDPKCATCGKAFGSWKAV 133
           + G+K+ R       +    G   G  +K KKK  EL  PP   P C  CG+ FGSWKAV
Sbjct: 94  SGGKKKSRPRISTQTDDEGDGLGEGEAKKPKKKAKELTHPPKGPPVCHICGRGFGSWKAV 153

Query: 134 FGHLRSHPERDYRGAFPPPKV---WEEMLQQEARQG------SSGTTIGCSVGGEM---- 193
           FGH+R+H +R+Y+G  PPP      E  +    R          G++ G +VGG      
Sbjct: 154 FGHMRAHRDRNYQGFLPPPTFSAGAERFVIPGLRSAFTIATVGGGSSGGVAVGGRSSGDF 213

Query: 194 -----GMSPPS--GRGIGIDLN-DPDEQ--GARREG--FPFDLNMPAPENEEDDD 217
                G +P S  GRG GIDLN +P EQ   A   G    FDLN   P++EE++D
Sbjct: 214 SGSGGGDAPGSEGGRGSGIDLNVEPVEQVEEATESGCIAKFDLNKSPPKDEEEED 268

[Close]

BLAST of Carg00541 vs. TAIR 10
Match: AT4G35700.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 56/152 (36.84%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 95  QKGKKKG--ELIDPPSTDPKCATCGKAFGSWKAVFGHLRSHPERDYRGAFPPP--KVWEE 154
           +K +KKG  +L   P   P C  CGK F SWKAVFGHLR H +R Y G  PPP     EE
Sbjct: 124 KKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAEE 183

Query: 155 MLQQEARQGSSGTTIGCSVGGEM-------GMSPPSGRGIG---------IDLN-DPDEQ 214
                A   + G        GE+       G++  S  G G         IDLN DP E+
Sbjct: 184 GFGGVATASTGGAVATAISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLNADPVEE 243

Query: 215 -------GARREGFPFDLN-MPAPENEEDDDN 218
                  G++R+   FDLN  P P+ +E++D+
Sbjct: 244 EDKVIGVGSKRK---FDLNRSPPPDGDEENDD 272

[Close]

BLAST of Carg00541 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 36/88 (40.91%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 60  PTMTFDMAPYSSPEASGRKRGRAEQHVGGSSCGSGQKGK--KKGELIDPPSTDPKCATCG 119
           P + F ++  S   +  +KR +       SS  S  K K  KK +   P  T P C  CG
Sbjct: 26  PNLQFALSS-SYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRP-CTECG 85

Query: 120 KAFGSWKAVFGHLRSHPERDYRGAFPPP 146
           + F SWKA+FGH+R HPER +RG  PPP
Sbjct: 86  RKFWSWKALFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of Carg00541 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-07
Identity = 32/85 (37.65%), Postives = 39/85 (45.88%), Query Frame = 0


Query: 77  RKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLRSHPER 136
           RKR +   +  GSS  S +         D       C  CGK FGS KA+FGH+R HPER
Sbjct: 31  RKRTKLTNNEVGSSSSSPRPKPVTQPDPDASQIARPCTECGKQFGSLKALFGHMRCHPER 90

Query: 137 DYRGAFPPPKVWEEMLQQEARQGSS 162
            +RG  PP      +    A   SS
Sbjct: 91  QWRGINPPSNFKRRINSNAASSSSS 115

[Close]

BLAST of Carg00541 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.6e-06
Identity = 22/52 (42.31%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 98  KKKGELIDPPSTDP----KCATCGKAFGSWKAVFGHLRSHPERDYRGAFPPP 146
           K+K + ID   TD     +C  CGK F +  ++FGH+R HP+R ++G  PPP
Sbjct: 102 KEKEKEIDLARTDVEGKIRCCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPPP 153

The following BLAST results are available for this feature:

BLAST of Carg00541 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034043.1	1.9e-123	100.00	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950356.1	2.2e-122	99.55	uncharacterized protein LOC111453468 [Cucurbita moschata]	[more]
KAG6603863.1	4.5e-120	97.73	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023544007.1	1.3e-106	89.69	zinc finger protein ZAT4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977283.1	1.4e-105	88.39	uncharacterized protein LOC111477651 [Cucurbita maxima]	[more]

BLAST of Carg00541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	2.4e-07	40.91	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
Q9SIJ0	2.0e-06	37.65	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]

BLAST of Carg00541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEL2	1.0e-122	99.55	uncharacterized protein LOC111453468 OS=Cucurbita moschata OX=3662 GN=LOC1114534...	[more]
A0A6J1IPI4	6.8e-106	88.39	uncharacterized protein LOC111477651 OS=Cucurbita maxima OX=3661 GN=LOC111477651...	[more]
A0A0A0KGW4	1.2e-62	65.05	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509590 P...	[more]
A0A1S3B298	4.6e-62	66.18	zinc finger protein ZAT4 OS=Cucumis melo OX=3656 GN=LOC103485364 PE=4 SV=1	[more]
A0A5D3CPY3	2.3e-61	65.70	Zinc finger protein ZAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Carg00541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35610.1	1.4e-15	37.71	zinc finger (C2H2 type) family protein	[more]
AT4G35700.1	1.6e-11	36.84	zinc finger (C2H2 type) family protein	[more]
AT4G35280.1	1.7e-08	40.91	C2H2-like zinc finger protein	[more]
AT2G17180.1	1.4e-07	37.65	C2H2-like zinc finger protein	[more]
AT2G26940.1	4.6e-06	42.31	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..60
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 64..219
None	No IPR available	PANTHER	PTHR47591:SF4	TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE	coord: 64..219
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 113..133
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 111..138 score: 8.974459

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00541-RA	Carg00541-RA	mRNA