Carg00511 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00511
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SNF1-related protein kinase regulatory subunit beta-2-like
Location	Carg_Chr03: 5370701 .. 5372416 (-)
RNA-Seq Expression	Carg00511
Synteny	Carg00511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTTTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGTAAAAATCTCTTTCTTGTTGACCATCTCATACCCTCTTACTATCCTGATATGAAAGTTGTCGATGGAACTCGGTTTCGTGAGATGCATGAAAGTTGATCATTTTGGTTGTTTTTGTTTAAAATTACCAACAAGTATGGAGCTTTCTGATCTAGTGCTCAGGGTTGAGAGTCAAATTCCTCTCGTTCTACCTTGGTGATGCTATTTGTAACAGCCCAAACCCACCACTGGCCGATATTGTTCTCTTTGGATTTTTCCTTTCGGGCTTCCTTCAAGGTTTTTAAAATACGTCTACTAGGGAGAGGTTTCCACACGCCCATAAAGAATGCTTCGTTCTCCTCTCCAATGTGGAATCTCACAATCCATCTCCCTTAGGGGCCAGCATTCTCGCTGGCACTCTTTCCCTTCTCCAATCGATGTGGGATCCCCTCATCCACCTTCCTTCGGGGCCCAGCGTCCTTGCTGGCACACCGCCTCGTGTCCACCCCCCTTCAGGGCTCAACCTCCTCGCTGGCACATCGCCCAATGTCTAGCTCTGTTACTATTTGTAACGGCTCAAACCAACCGCCAGCAAATATTGCCCTCTTTGGGCTTTTCCCTGTCGGGGTTACCCTCAACGTTTTTAAAACGTGTATGCTATAGAAAAGTTTCCACACCCTTATAAAGAATACTTCGTTCTCCTCTTCAACCGATGTGGGATCTCACTCGCTTTTTTAAAAATCCAAAATAGTGAGTTTCAAGATAACTTTGCACTTTGTAAGCATGTGTTTATACCATCACATGGATGACTCTCTCTCTCTCGTTTTTAGTCAAGAAGCTTGATAATCAACTGAGCTCAATTTATGCTTATGTGACACTTTGATGCAGCATTTGATATATATATTGCAAAAATAATCGTGTTTTTTTCTTTCATATCTGGGTGTTGTATTTGGAATAATAGAAGCTTGTAGAGCTTATTTTTTAATGGATGAATGCTATAGGACTATGTCCCAGAAGACATCGAAAGCATTTCAAGCTTTGAACCTCCTCAGTCCCCAGAGTCCAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCTTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAGAATAGGCATCCTGTGTAATCAAATTCACAATCTAAACCCATTTTTCCTTACTGGAGCTCTATATGGTGTCGATGCCATTTCGTTTAAACACTTCTGAATCAACCACGAAGTCTGAATGGATCGTTCTTCAAGATTGTACCTTACATAATACCATCTCTCCTTTTTCTATCTGACATGCATTTTATCCAGTTGCTAAAATTTCCCCTTCCTTGTAGCAGGATCATCTCACTCCCTCTCCCTCTCCCATTTGTCTCGATGGTTGCAAGTTTTGCTAATGA

mRNA sequence

ATGAAGGTTTTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGACTATGTCCCAGAAGACATCGAAAGCATTTCAAGCTTTGAACCTCCTCAGTCCCCAGAGTCCAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCTTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAGAATAGGCATCCTGTGTAATCAAATTCACAATCTAAACCCATTTTTCCTTACTGGAGCTCTATATGGTGTCGATGCCATTTCGTTTAAACACTTCTGAATCAACCACGAAGTCTGAATGGATCGTTCTTCAAGATTGTACCTTACATAATACCATCTCTCCTTTTTCTATCTGACATGCATTTTATCCAGTTGCTAAAATTTCCCCTTCCTTGTAGCAGGATCATCTCACTCCCTCTCCCTCTCCCATTTGTCTCGATGGTTGCAAGTTTTGCTAATGA

Coding sequence (CDS)

ATGAAGGTTTTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGACTATGTCCCAGAAGACATCGAAAGCATTTCAAGCTTTGAACCTCCTCAGTCCCCAGAGTCCAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCTTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAG

Protein sequence

MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR

Homology

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BLAST of Carg00511 vs. NCBI nr
Match: KAG7034013.1 (SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE
Sbjct: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 153
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 152

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BLAST of Carg00511 vs. NCBI nr
Match: XP_022949884.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >KAG6603833.1 SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 148 MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 207

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE
Sbjct: 208 PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 267

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 153
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 268 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

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BLAST of Carg00511 vs. NCBI nr
Match: XP_023543083.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.8 bits (787), Expect = 5.4e-80
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPP S
Sbjct: 148 MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPPS 207

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE
Sbjct: 208 PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 267

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 153
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 268 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Carg00511 vs. NCBI nr
Match: XP_022977712.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 5.4e-80
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVLSSGVYQYRFIADGQWRYAPDLPWA DDAGNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 148 MKVLSSGVYQYRFIADGQWRYAPDLPWAPDDAGNAYNILDLQDYVPEDIESISSFEPPQS 207

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE
Sbjct: 208 PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 267

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 153
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 268 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Carg00511 vs. NCBI nr
Match: XP_022926790.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata])

HSP 1 Score: 296.6 bits (758), Expect = 1.2e-76
Identity = 143/150 (95.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           +KVL SGVYQYRFIADGQWRYAPDLPWAQDD+GNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 152 VKVLPSGVYQYRFIADGQWRYAPDLPWAQDDSGNAYNILDLQDYVPEDIESISSFEPPQS 211

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLK+TLLDMP PYNEILPP+SRPQHV+LNHLYMQKE
Sbjct: 212 PESSYSSLQLGSEDFSKEPPLAPPHLKSTLLDMPCPYNEILPPLSRPQHVMLNHLYMQKE 271

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 272 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 301

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BLAST of Carg00511 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-62
Identity = 114/150 (76.00%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVL SGVY+YRFI DGQWR+AP+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPPQS
Sbjct: 140 MKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQS 199

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PE+SYS+L LG+ED+SKEPP+ PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK 
Sbjct: 200 PENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKG 259

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           + GPSVVALG THRFLAKYVTVVLYKSLQR
Sbjct: 260 KSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

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BLAST of Carg00511 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-33
Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 3   VLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPE 62
           VL SG+Y Y+ I DG+ +Y PDLP+  D+ GN  NILD+ ++VPE+ ESI  FE P SP+
Sbjct: 140 VLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPD 199

Query: 63  SSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERG 122
            SY      +ED++KEP   PP L  TLL       E     ++PQHVVLNH+++++   
Sbjct: 200 HSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT----TEETAIATKPQHVVLNHVFIEQGWT 259

Query: 123 GPSVVALGMTHRFLAKYVTVVLYKSLQR 151
             S+VALG+THRF +KY+TVVLYK L R
Sbjct: 260 PQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Carg00511 vs. ExPASy Swiss-Prot
Match: Q9ZUU8 (SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=KINB3 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-15
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 46  PEDIE--SISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPP 105
           P+D E  ++  FE P SP SSY+++   +ED +++PP  PPHL+ +LL         +  
Sbjct: 6   PDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGS----MEL 65

Query: 106 ISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQ 152
              PQ+VVLNHLY++      SVVALG +HRF  K+VTVV+YK +QR+
Sbjct: 66  AYAPQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRR 109

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BLAST of Carg00511 vs. ExPASy Swiss-Prot
Match: Q9R078 (5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus OX=10090 GN=Prkab1 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-13
Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 4   LSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPE-------------DIE 63
           L  G +QY+F  DGQW + P  P      G   NI+ ++    E             D+ 
Sbjct: 118 LPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVS 177

Query: 64  SISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHV 123
            +SS  P    +  Y S     E+  K PP+ PPHL   +L+  +  +     +  P HV
Sbjct: 178 ELSSSPPGPYHQEPYMS---KPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHV 237

Query: 124 VLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSL 149
           +LNHLY    + G  V+ L  THR+  KYVT +LYK +
Sbjct: 238 MLNHLYALSIKDG--VMVLSATHRYKKKYVTTLLYKPI 270

[Close]

BLAST of Carg00511 vs. ExPASy Swiss-Prot
Match: P80386 (5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Prkab1 PE=1 SV=4)

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-13
Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 4   LSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPE-------------DIE 63
           L  G +QY+F  DGQW + P  P      G   NI+ ++    E             D+ 
Sbjct: 118 LPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVS 177

Query: 64  SISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHV 123
            +SS  P    +  Y S     E+  K PP+ PPHL   +L+  +  +     +  P HV
Sbjct: 178 ELSSSPPGPYHQEPYIS---KPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHV 237

Query: 124 VLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSL 149
           +LNHLY    + G  V+ L  THR+  KYVT +LYK +
Sbjct: 238 MLNHLYALSIKDG--VMVLSATHRYKKKYVTTLLYKPI 270

[Close]

BLAST of Carg00511 vs. ExPASy TrEMBL
Match: A0A6J1GE75 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111453144 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.2e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 148 MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 207

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE
Sbjct: 208 PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 267

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 153
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 268 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Carg00511 vs. ExPASy TrEMBL
Match: A0A6J1IJ92 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111477935 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.6e-80
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVLSSGVYQYRFIADGQWRYAPDLPWA DDAGNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 148 MKVLSSGVYQYRFIADGQWRYAPDLPWAPDDAGNAYNILDLQDYVPEDIESISSFEPPQS 207

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE
Sbjct: 208 PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 267

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 153
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 268 RGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Carg00511 vs. ExPASy TrEMBL
Match: A0A6J1EM37 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111433799 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.0e-77
Identity = 143/150 (95.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           +KVL SGVYQYRFIADGQWRYAPDLPWAQDD+GNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 152 VKVLPSGVYQYRFIADGQWRYAPDLPWAQDDSGNAYNILDLQDYVPEDIESISSFEPPQS 211

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLK+TLLDMP PYNEILPP+SRPQHV+LNHLYMQKE
Sbjct: 212 PESSYSSLQLGSEDFSKEPPLAPPHLKSTLLDMPCPYNEILPPLSRPQHVMLNHLYMQKE 271

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 272 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 301

[Close]

BLAST of Carg00511 vs. ExPASy TrEMBL
Match: A0A0A0KH57 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.3e-76
Identity = 143/150 (95.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVL SGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 148 MKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 207

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSY+SLQL ++D+SKEPPLAPPHLKTTLLDMP PYNEILPPISRPQHVVLNHLYMQKE
Sbjct: 208 PESSYNSLQLVADDYSKEPPLAPPHLKTTLLDMPCPYNEILPPISRPQHVVLNHLYMQKE 267

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           RGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 268 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297

[Close]

BLAST of Carg00511 vs. ExPASy TrEMBL
Match: A0A6J1KRL1 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111497000 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-76
Identity = 142/150 (94.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           +KVL SGVYQYRFIADGQWRYAPDLPWAQDD+GNAYNILDLQDYVPEDIESISSFEPPQS
Sbjct: 151 VKVLPSGVYQYRFIADGQWRYAPDLPWAQDDSGNAYNILDLQDYVPEDIESISSFEPPQS 210

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PESSYSSLQLGSEDFSKEPPLAPPHLK+TLLDMP PYNEILPP+SRPQHV+LNHLYMQKE
Sbjct: 211 PESSYSSLQLGSEDFSKEPPLAPPHLKSTLLDMPCPYNEILPPLSRPQHVMLNHLYMQKE 270

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           RGGPSVVALGMT+RFLAKYVTVVLYKSLQR
Sbjct: 271 RGGPSVVALGMTNRFLAKYVTVVLYKSLQR 300

[Close]

BLAST of Carg00511 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-63
Identity = 114/150 (76.00%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVL SGVY+YRFI DGQWR+AP+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPPQS
Sbjct: 110 MKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQS 169

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PE+SYS+L LG+ED+SKEPP+ PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK 
Sbjct: 170 PENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKG 229

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           + GPSVVALG THRFLAKYVTVVLYKSLQR
Sbjct: 230 KSGPSVVALGSTHRFLAKYVTVVLYKSLQR 259

[Close]

BLAST of Carg00511 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-63
Identity = 114/150 (76.00%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVL SGVY+YRFI DGQWR+AP+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPPQS
Sbjct: 109 MKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQS 168

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PE+SYS+L LG+ED+SKEPP+ PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK 
Sbjct: 169 PENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKG 228

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           + GPSVVALG THRFLAKYVTVVLYKSLQR
Sbjct: 229 KSGPSVVALGSTHRFLAKYVTVVLYKSLQR 258

[Close]

BLAST of Carg00511 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-63
Identity = 114/150 (76.00%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQS 60
           MKVL SGVY+YRFI DGQWR+AP+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPPQS
Sbjct: 112 MKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQS 171

Query: 61  PESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKE 120
           PE+SYS+L LG+ED+SKEPP+ PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK 
Sbjct: 172 PENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKG 231

Query: 121 RGGPSVVALGMTHRFLAKYVTVVLYKSLQR 151
           + GPSVVALG THRFLAKYVTVVLYKSLQR
Sbjct: 232 KSGPSVVALGSTHRFLAKYVTVVLYKSLQR 261

[Close]

BLAST of Carg00511 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-34
Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 3   VLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPE 62
           VL SG+Y Y+ I DG+ +Y PDLP+  D+ GN  NILD+ ++VPE+ ESI  FE P SP+
Sbjct: 140 VLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPD 199

Query: 63  SSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERG 122
            SY      +ED++KEP   PP L  TLL       E     ++PQHVVLNH+++++   
Sbjct: 200 HSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT----TEETAIATKPQHVVLNHVFIEQGWT 259

Query: 123 GPSVVALGMTHRFLAKYVTVVLYKSLQR 151
             S+VALG+THRF +KY+TVVLYK L R
Sbjct: 260 PQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Carg00511 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-34
Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 3   VLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPE 62
           VL SG+Y Y+ I DG+ +Y PDLP+  D+ GN  NILD+ ++VPE+ ESI  FE P SP+
Sbjct: 177 VLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPD 236

Query: 63  SSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERG 122
            SY      +ED++KEP   PP L  TLL       E     ++PQHVVLNH+++++   
Sbjct: 237 HSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT----TEETAIATKPQHVVLNHVFIEQGWT 296

Query: 123 GPSVVALGMTHRFLAKYVTVVLYKSLQR 151
             S+VALG+THRF +KY+TVVLYK L R
Sbjct: 297 PQSIVALGLTHRFESKYITVVLYKPLTR 320

The following BLAST results are available for this feature:

BLAST of Carg00511 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034013.1	1.1e-80	100.00	SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyro...	[more]
XP_022949884.1	1.1e-80	100.00	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] ...	[more]
XP_023543083.1	5.4e-80	99.34	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp...	[more]
XP_022977712.1	5.4e-80	99.34	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima]	[more]
XP_022926790.1	1.2e-76	95.33	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata]	[more]

BLAST of Carg00511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	1.8e-62	76.00	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	3.0e-33	49.32	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
Q9ZUU8	2.2e-15	44.44	SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX...	[more]
Q9R078	2.6e-13	32.28	5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus OX=10090 GN=Prkab...	[more]
P80386	3.4e-13	32.28	5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Carg00511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE75	5.2e-81	100.00	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata...	[more]
A0A6J1IJ92	2.6e-80	99.34	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima O...	[more]
A0A6J1EM37	6.0e-77	95.33	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata...	[more]
A0A0A0KH57	2.3e-76	95.33	AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=3...	[more]
A0A6J1KRL1	3.9e-76	94.67	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima O...	[more]

BLAST of Carg00511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	1.3e-63	76.00	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	1.3e-63	76.00	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	1.3e-63	76.00	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	2.1e-34	49.32	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	2.1e-34	49.32	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 58..148 e-value: 1.2E-19 score: 81.3
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 76..146 e-value: 7.1E-19 score: 67.9
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 3..42 e-value: 2.5E-11 score: 43.6
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 1..42 e-value: 3.7E-9 score: 38.5
None	No IPR available	GENE3D	6.20.250.60		coord: 50..148 e-value: 2.9E-23 score: 83.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..73
None	No IPR available	PANTHER	PTHR46316:SF2	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2	coord: 1..150
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 4..40 e-value: 4.45894E-11 score: 53.7569
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..150
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 4..48
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 45..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00511-RA	Carg00511-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding