Carg00443 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg00443
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor HY5
LocationCarg_Chr04: 7333201 .. 7334618 (+)
RNA-Seq ExpressionCarg00443
SyntenyCarg00443
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGAACGAACCACCGCCGCCGCCTCCGCTAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGGTTTGATTTTAGTTCCTTGTTTTGTCTTTACGATTTCTCGTGGAAAGATTGTACGTGAAGTGCTATTGGACGTCTTCTGTAGTTTTGTTTTGTTCTTTTGGTTGATGGAGACGAGTTTGTTTTGAGAAATCAGTCACCTGGCTTGGCTGTGAATGATTTTATTTGATCATCGTTTGTTTTCCTGGCCTATTTGTACGGTAAAATTGCCAGTGAATCTGTATCGGAATGAAATAAATTATTCTAACATGAATTCGTACCAGTTTGATAGTTTCTCCTTGTTGATTCAAGCTTTTGAAATTTTGTTGATGTAGGACCGTATATAATTAATTAATCTTAATTTCCAGGAATCGCATCCTGTTTTTGTTTCTTTGAGGGAGAATTACGTTATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGAAGTGATGAGGAGGAGATAAGCAGAGTGCCGCAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGTAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTTAAGAGGTAAGGTTTCTAGGTCTAGAATGGGGACCAAAGTAGCGTATTACTGCCAATTTCTTTACTCGTATCGTATGTGGAGGGATTGCAGCATCTCATTTTTGTGACACACTTTATCTCTCTCTCTCGTAAAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATACGAGCAGCAAACTTGTTGAAAAGGAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCCCCTCGCTTCCATTTTCTTGTTTTTAAACATTGCATGTTAATTACGTTTCCTTTCCTTTCACATATTTATGGTTATCGTTTCTCATTTTCATATTCATTTATTTCTGGTTGGTTGAATCATTGAATTGCCAATAGGTTTGATCAAATTCATCGCTGTTTTATCTGGAAGTATTGATTTTCTTCCATTATATTTTGAATCTTTTCTTAGAATTTGCTAGTCTATTACTCATCTTTCAATATTCCTTTTGTTGAAACAAAACATAAAATTCAATACTCATAGAGGTAGACATTTTTAAATTCAAGTATCAATTAAACTTGCTTGAACATCATAATCTATTACACCTTTACTGATTATAAATTGTGTATTTCTGATCAATTAATTTAATACAACATGAGGAGATCAAATGTACCAAGATATAGTATAATGTCGATGGACTTAAGCA

mRNA sequence

ATGCAGGAACGAACCACCGCCGCCGCCTCCGCTAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGGTTTGATTTTAGTTCCTTGTTTTGTCTTTACGATTTCTCGTGGAAAGATTGAATCGCATCCTGTTTTTGTTTCTTTGAGGGAGAATTACGTTATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGAAGTGATGAGGAGGAGATAAGCAGAGTGCCGCAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGTAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTTAAGAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATACGAGCAGCAAACTTGTTGAAAAGGAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCCCCTCGCTTCCATTTTCTTGTTTTTAAACATTGCATGTTAATTACGTTTCCTTTCCTTTCACATATTTATGGTTATCGTTTCTCATTTTCATATTCATTTATTTCTGGTTGGTTGAATCATTGAATTGCCAATAGGTTTGATCAAATTCATCGCTGTTTTATCTGGAAGTATTGATTTTCTTCCATTATATTTTGAATCTTTTCTTAGAATTTGCTAGTCTATTACTCATCTTTCAATATTCCTTTTGTTGAAACAAAACATAAAATTCAATACTCATAGAGGTAGACATTTTTAAATTCAAGTATCAATTAAACTTGCTTGAACATCATAATCTATTACACCTTTACTGATTATAAATTGTGTATTTCTGATCAATTAATTTAATACAACATGAGGAGATCAAATGTACCAAGATATAGTATAATGTCGATGGACTTAAGCA

Coding sequence (CDS)

ATGCAGGAACGAACCACCGCCGCCGCCTCCGCTAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGGTTTGATTTTAGTTCCTTGTTTTGTCTTTACGATTTCTCGTGGAAAGATTGAATCGCATCCTGTTTTTGTTTCTTTGAGGGAGAATTACGTTATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGAAGTGATGAGGAGGAGATAAGCAGAGTGCCGCAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGTAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTTAAGAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATACGAGCAGCAAACTTGTTGAAAAGGAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCCCCTCGCTTCCATTTTCTTGTTTTTAAACATTGCATGTTAA

Protein sequence

MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRENYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHVRQPTPLASIFLFLNIAC
Homology
[Close]
BLAST of Carg00443 vs. NCBI nr
Match: KAG7031785.1 (Transcription factor HY5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.2 bits (918), Expect = 4.5e-95
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE
Sbjct: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
           NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180

Query: 181 RQPTPLASIFLFLNIAC 198
           RQPTPLASIFLFLNIAC
Sbjct: 181 RQPTPLASIFLFLNIAC 197

[Close]
BLAST of Carg00443 vs. NCBI nr
Match: KAG6608147.1 (hypothetical protein SDJN03_01489, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.3 bits (617), Expect = 3.6e-60
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0 

Query: 48  KIESHPVFVSLRENYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPAS 107
           K ESHPVFVSLRENYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPAS
Sbjct: 413 KKESHPVFVSLRENYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPAS 472

Query: 108 DGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENL 167
           DGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENL
Sbjct: 473 DGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENL 532

Query: 168 STLQNENQMLRHVRQPT 185
           STLQNENQMLRH+ + T
Sbjct: 533 STLQNENQMLRHILKNT 549

[Close]
BLAST of Carg00443 vs. NCBI nr
Match: XP_022981220.1 (transcription factor HY5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 2.0e-55
Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTA ASASRTRSSSERSSSSAFLLDVK                             
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVK----------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
                    EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  ---------EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRH+
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHI 146

Query: 181 RQPT 185
            + T
Sbjct: 181 LKNT 146

[Close]
BLAST of Carg00443 vs. NCBI nr
Match: XP_022940419.1 (transcription factor HY5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 226.5 bits (576), Expect = 2.0e-55
Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTAAASA RTRSSSERSSSSAFLLDVK                             
Sbjct: 1   MQERTTAAASAGRTRSSSERSSSSAFLLDVK----------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
                    EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  ---------EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRH+
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHI 146

Query: 181 RQPT 185
            + T
Sbjct: 181 LKNT 146

[Close]
BLAST of Carg00443 vs. NCBI nr
Match: XP_022981221.1 (transcription factor HY5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 5.0e-54
Identity = 139/184 (75.54%), Postives = 141/184 (76.63%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTA ASASRTRSSSERSSSSAFLLDVKE                            
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKE---------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
                       GVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  ------------GVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRH+
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHI 144

Query: 181 RQPT 185
            + T
Sbjct: 181 LKNT 144

[Close]
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: Q9SM50 (Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.0e-26
Identity = 92/190 (48.42%), Postives = 110/190 (57.89%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQE+ T++ +AS   SSSERSSSSA   ++KEG+                          
Sbjct: 1   MQEQATSSIAASSLPSSSERSSSSALHHELKEGM-------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICG-----NSASAAGGTSASGKAPASDGV-RSRG 120
                            ++EI RVP++ G      SAS   G SA+G+A  S G  R RG
Sbjct: 61  ---------------ESDDEIRRVPEMGGEATGTTSASGRDGVSAAGQAQPSAGTQRKRG 120

Query: 121 RSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNEN 180
           RS ADKE+KRLKRLLRNRVSAQQARERKKAYL DLE R   L  +N+ELEE LSTLQNEN
Sbjct: 121 RSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEARVKELETKNAELEERLSTLQNEN 149

Query: 181 QMLRHVRQPT 185
           QMLRH+ + T
Sbjct: 181 QMLRHILKNT 149

[Close]
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: O24646 (Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23
Identity = 87/192 (45.31%), Postives = 107/192 (55.73%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQE+ T++ +AS   SSSERSSSSA  L++KEG+                          
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGI-------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQI----CGNSASAAGGTSASG----KAPASDGVRS 120
                            +EEI RVP+      G   S     SA+G    +A   +  R 
Sbjct: 61  ---------------ESDEEIRRVPEFGGEAVGKETSGRESGSATGQERTQATVGESQRK 120

Query: 121 RGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQN 180
           RGR+ A+KE+KRLKRLLRNRVSAQQARERKKAYL +LE R  +L  +NSELEE LSTLQN
Sbjct: 121 RGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQN 151

Query: 181 ENQMLRHVRQPT 185
           ENQMLRH+ + T
Sbjct: 181 ENQMLRHILKNT 151

[Close]
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: Q8W191 (Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-14
Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 0 

Query: 78  EEEISRVPQI------CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKR 137
           +EE+  VP +      C  S+SA  G +        +GV    R RGR+  DKE + LKR
Sbjct: 25  DEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKR 84

Query: 138 LLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLR 179
           LLRNRVSAQQARERKK Y+ DLE RA  L   N +LEE +STL NEN MLR
Sbjct: 85  LLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLR 135

[Close]
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: Q54RZ9 (Probable basic-leucine zipper transcription factor G OS=Dictyostelium discoideum OX=44689 GN=bzpG PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-04
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0 

Query: 120 KESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLR 179
           KE KR KRL++NR SA  +R+RK+  L DLE R   L   + ++ + LS+L+NEN +L+
Sbjct: 276 KELKRQKRLIKNRESAHLSRQRKRERLTDLEHRVEELSSNSIDINKTLSSLENENLILK 334

[Close]
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1IYV9 (transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 9.8e-56
Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTA ASASRTRSSSERSSSSAFLLDVK                             
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVK----------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
                    EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  ---------EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRH+
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHI 146

Query: 181 RQPT 185
            + T
Sbjct: 181 LKNT 146

[Close]
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1FK24 (transcription factor HY5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446032 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 9.8e-56
Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTAAASA RTRSSSERSSSSAFLLDVK                             
Sbjct: 1   MQERTTAAASAGRTRSSSERSSSSAFLLDVK----------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
                    EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  ---------EDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRH+
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHI 146

Query: 181 RQPT 185
            + T
Sbjct: 181 LKNT 146

[Close]
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1IVY4 (transcription factor HY5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.4e-54
Identity = 139/184 (75.54%), Postives = 141/184 (76.63%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTA ASASRTRSSSERSSSSAFLLDVKE                            
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKE---------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
                       GVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  ------------GVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRH+
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHI 144

Query: 181 RQPT 185
            + T
Sbjct: 181 LKNT 144

[Close]
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1FQI7 (transcription factor HY5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446032 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.4e-54
Identity = 139/184 (75.54%), Postives = 141/184 (76.63%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQERTTAAASA RTRSSSERSSSSAFLLDVKE                            
Sbjct: 1   MQERTTAAASAGRTRSSSERSSSSAFLLDVKE---------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120
                       GVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK
Sbjct: 61  ------------GVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADK 120

Query: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHV 180
           ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRH+
Sbjct: 121 ESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHI 144

Query: 181 RQPT 185
            + T
Sbjct: 181 LKNT 144

[Close]
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1CN91 (transcription factor HY5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012541 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39
Identity = 124/192 (64.58%), Postives = 131/192 (68.23%), Query Frame = 0 

Query: 1   MQERTTAAA----SASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFV 60
           MQER+ AAA    +A R RSSSERSSSSAF L+                           
Sbjct: 1   MQERSAAAAANPIAAGRLRSSSERSSSSAFQLE--------------------------- 60

Query: 61  SLRENYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPA----SDGVRS 120
             RE         EDIGV SDEEEISRVPQICGNSAS AGGTSASGKA A    SDG RS
Sbjct: 61  --RE-------IKEDIGVDSDEEEISRVPQICGNSAS-AGGTSASGKARAQSAGSDGPRS 120

Query: 121 RGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQN 180
           RGRS+ADKESKRLKRLLRNRVSAQQARERKKAYL +LEIRA NL KRNSELEE LSTLQN
Sbjct: 121 RGRSAADKESKRLKRLLRNRVSAQQARERKKAYLNELEIRATNLEKRNSELEEKLSTLQN 155

Query: 181 ENQMLRHVRQPT 185
           ENQMLR + + T
Sbjct: 181 ENQMLRQILKNT 155

[Close]
BLAST of Carg00443 vs. TAIR 10
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 87/192 (45.31%), Postives = 107/192 (55.73%), Query Frame = 0 

Query: 1   MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRE 60
           MQE+ T++ +AS   SSSERSSSSA  L++KEG+                          
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGI-------------------------- 60

Query: 61  NYVMICFFTEDIGVGSDEEEISRVPQI----CGNSASAAGGTSASG----KAPASDGVRS 120
                            +EEI RVP+      G   S     SA+G    +A   +  R 
Sbjct: 61  ---------------ESDEEIRRVPEFGGEAVGKETSGRESGSATGQERTQATVGESQRK 120

Query: 121 RGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQN 180
           RGR+ A+KE+KRLKRLLRNRVSAQQARERKKAYL +LE R  +L  +NSELEE LSTLQN
Sbjct: 121 RGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQN 151

Query: 181 ENQMLRHVRQPT 185
           ENQMLRH+ + T
Sbjct: 181 ENQMLRHILKNT 151

[Close]
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.2 (HY5-homolog )

HSP 1 Score: 79.0 bits (193), Expect = 4.9e-15
Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 0 

Query: 78  EEEISRVPQI------CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKR 137
           +EE+  VP +      C  S+SA  G +        +GV    R RGR+  DKE + LKR
Sbjct: 25  DEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKR 84

Query: 138 LLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLR 179
           LLRNRVSAQQARERKK Y+ DLE RA  L   N +LEE +STL NEN MLR
Sbjct: 85  LLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLR 135

[Close]
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.1 (HY5-homolog )

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14
Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 88  CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKK 147
           C  S+SA  G +        +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK
Sbjct: 27  CVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKK 86

Query: 148 AYLGDLEIRAANLLKRNSELEENLSTLQNENQMLR 179
            Y+ DLE RA  L   N +LEE +STL NEN MLR
Sbjct: 87  VYVSDLESRANELQNNNDQLEEKISTLTNENTMLR 121

[Close]
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.3 (HY5-homolog )

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14
Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 88  CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKK 147
           C  S+SA  G +        +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK
Sbjct: 12  CVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKK 71

Query: 148 AYLGDLEIRAANLLKRNSELEENLSTLQNENQMLR 179
            Y+ DLE RA  L   N +LEE +STL NEN MLR
Sbjct: 72  VYVSDLESRANELQNNNDQLEEKISTLTNENTMLR 106

[Close]
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.4 (HY5-homolog )

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14
Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 88  CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKK 147
           C  S+SA  G +        +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK
Sbjct: 26  CVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKK 85

Query: 148 AYLGDLEIRAANLLKRNSELEENLSTLQNENQMLR 179
            Y+ DLE RA  L   N +LEE +STL NEN MLR
Sbjct: 86  VYVSDLESRANELQNNNDQLEEKISTLTNENTMLR 120

The following BLAST results are available for this feature:
BLAST of Carg00443 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7031785.14.5e-95100.00Transcription factor HY5, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6608147.13.6e-6096.35hypothetical protein SDJN03_01489, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022981220.12.0e-5576.63transcription factor HY5-like isoform X1 [Cucurbita maxima][more]
XP_022940419.12.0e-5576.63transcription factor HY5-like isoform X1 [Cucurbita moschata][more]
XP_022981221.15.0e-5475.54transcription factor HY5-like isoform X2 [Cucurbita maxima][more]
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SM506.0e-2648.42Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1[more]
O246461.6e-2345.31Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1[more]
Q8W1916.9e-1451.35Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1[more]
Q54RZ96.4e-0445.76Probable basic-leucine zipper transcription factor G OS=Dictyostelium discoideum... [more]
BLAST of Carg00443 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IYV99.8e-5676.63transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1FK249.8e-5676.63transcription factor HY5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1IVY42.4e-5475.54transcription factor HY5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1FQI72.4e-5475.54transcription factor HY5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1CN912.9e-3964.58transcription factor HY5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11... [more]
BLAST of Carg00443 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11260.11.2e-2445.31Basic-leucine zipper (bZIP) transcription factor family protein [more]
AT3G17609.24.9e-1551.35HY5-homolog [more]
AT3G17609.14.1e-1455.79HY5-homolog [more]
AT3G17609.34.1e-1455.79HY5-homolog [more]
AT3G17609.44.1e-1455.79HY5-homolog [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..138
NoneNo IPR availableCOILSCoilCoilcoord: 146..180
NoneNo IPR availablePRINTSPR00041LEUZIPPRCREBcoord: 156..173
score: 34.81
coord: 136..156
score: 43.49
coord: 118..134
score: 35.69
coord: 34..49
score: 25.0
NoneNo IPR availableGENE3D1.20.5.490Single helix bincoord: 142..180
e-value: 1.2E-14
score: 55.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..122
NoneNo IPR availablePANTHERPTHR46714:SF6TRANSCRIPTIONAL ACTIVATOR HAC1coord: 1..184
NoneNo IPR availableCDDcd14704bZIP_HY5-likecoord: 124..175
e-value: 5.97299E-19
score: 74.533
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 123..179
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 119..183
e-value: 1.2E-9
score: 48.1
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 120..178
e-value: 2.1E-11
score: 43.8
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 126..141
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 121..178
score: 11.219788
IPR044280Transcriptional activator Hac1/HY5PANTHERPTHR46714TRANSCRIPTIONAL ACTIVATOR HAC1coord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00443-RACarg00443-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0009639 response to red or far red light
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0003700 DNA-binding transcription factor activity