Carg00437 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGAATATAAACCCAAGGAATCACGTCCGGCAGTGCTGGGGGAATCATTCATCAAGAATAAAAAAGACAACGACGATTCAGAACAATTCCCTTCCCACATTCACCAGAAACAACGATCCACAATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGTATTCCATTTTATCCTTCTTCAAGCTCAGTTTTCGTTTTATTTTCCATGCTAGGGTTACTCTTTGTCGAGCTCTGATCGGAGCTCTATCTTTCATTGTTGCGGCGCTTTCTTTCTCTAATTGCGGATTGCCGTTATCTCAGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGGTAAGAGGTCCTGTTTGGATTCTTCTGAACTCGATTTAACATTTCCTTGGATGTCTGTAGTCTGTCGAGTTAGAGTATGCATTAATTTCTCAGTATTCCTCTTCAGTCTTCATAGAGTTGTTTTTTTGGCTTGGTTGGGGAAGATCGAACTGTAATTACGGCGAGGTTTTCAATTGATTCGTGGTGACCGATTGATCAATTGTTGTTTAAGCTTAGTCATAGAAAGTATTAGGAGATTGTTCTGTCTAGGCTGTAGAATTTGGATATAATTCAGACCTCTTCTACTTTTCTATCTGTGCAGTATATTAAATTTCTTCAGCATCCATAGTATCAGTATTAACGTTTGGTTAACAAGAATCTGGTGATTACCTTGAAATCTGGACTGTTTTTATGAATGATTCTTTATTTTATTTCAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGAGAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTTGTGCCTTCATCCTTGAATTTCCAATTTTGCATTTAACATGTTCTTGATCTATTCAATAATTGAAGGTTTAGAGTTCTTTTAAACTAAAAGAACATAAAATTCAAAATTTTATATCCCGTAGATTAGTTAGTTTTTGTTGAACATATTAGTTACCTATAAGATTTAAAATTGAAATTTCAGGACCCATTAAAGACACTTTTTAAGCTCATGACCTCTTTTGTAGAACGAAAAACGTATGAACTGAAACTTTAATCGGAAGATATCTTTTGTTGGTGTAGGTTATGCGTAGGGGTTATTGGGAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAATTCTAGTACTTGGTTGGTTCTGAGCTTGAGGATTTGTGGTTCACTTTCTCGAGTGCTAAGCTATTTTTTGATTCCCAATTGACTGTATATGTAAAAGCTTGGCTGTGATAAACCAGGTAAGAACTTCACAAGTGCTTGGTGTCATTTTTTTGGTCTCTAGGTTGCCATATGATATGATGGCATTCTTGTATATCTAAGGCAGTGGAAATTTGAACTGCTGGAATAATGTCGAATATAATTTGGTGATGGCTCCACCAAATGAAGCTCTATTTCCTTTACAT CCGAATATAAACCCAAGGAATCACGTCCGGCAGTGCTGGGGGAATCATTCATCAAGAATAAAAAAGACAACGACGATTCAGAACAATTCCCTTCCCACATTCACCAGAAACAACGATCCACAATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGAGAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTATGCGTAGGGGTTATTGGGAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAATTCTAGTACTTGGTTGGTTCTGAGCTTGAGGATTTGTGGTTCACTTTCTCGAGTGCTAAGCTATTTTTTGATTCCCAATTGACTGTATATGTAAAAGCTTGGCTGTGATAAACCAGGTAAGAACTTCACAAGTGCTTGGTGTCATTTTTTTGGTCTCTAGGTTGCCATATGATATGATGGCATTCTTGTATATCTAAGGCAGTGGAAATTTGAACTGCTGGAATAATGTCGAATATAATTTGGTGATGGCTCCACCAAATGAAGCTCTATTTCCTTTACAT ATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGAGAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTATGCGTAGGGGTTATTGGGAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAA MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKAV Homology
BLAST of Carg00437 vs. NCBI nr
Match: KAG7031779.1 (V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 334.7 bits (857), Expect = 4.9e-88 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg00437 vs. NCBI nr
Match: KAG6608142.1 (V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 334.0 bits (855), Expect = 8.3e-88 Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg00437 vs. NCBI nr
Match: XP_022940150.1 (V-type proton ATPase subunit c''2 [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87 Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg00437 vs. NCBI nr
Match: XP_023523441.1 (V-type proton ATPase subunit c''2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 332.8 bits (852), Expect = 1.9e-87 Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Carg00437 vs. NCBI nr
Match: XP_022981207.1 (V-type proton ATPase subunit c''2 [Cucurbita maxima]) HSP 1 Score: 332.4 bits (851), Expect = 2.4e-87 Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 2.1e-78 Identity = 158/173 (91.33%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 2.8e-78 Identity = 159/177 (89.83%), Postives = 168/177 (94.92%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.7e-46 Identity = 94/160 (58.75%), Postives = 132/160 (82.50%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.5e-44 Identity = 93/160 (58.13%), Postives = 125/160 (78.12%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy Swiss-Prot
Match: Q99437 (V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens OX=9606 GN=ATP6V0B PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.5e-44 Identity = 93/160 (58.13%), Postives = 125/160 (78.12%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy TrEMBL
Match: A0A6J1FPR0 (V-type proton ATPase subunit c''2 OS=Cucurbita moschata OX=3662 GN=LOC111445862 PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.3e-88 Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy TrEMBL
Match: A0A6J1ITC9 (V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111480416 PE=3 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87 Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy TrEMBL
Match: A0A2I0IJP7 (V-type proton ATPase subunit c''2 OS=Punica granatum OX=22663 GN=LOC116188529 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81 Identity = 167/175 (95.43%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy TrEMBL
Match: A0A6A6LV28 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_024103 PE=3 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 4.8e-81 Identity = 170/182 (93.41%), Postives = 174/182 (95.60%), Query Frame = 0
BLAST of Carg00437 vs. ExPASy TrEMBL
Match: A0A2C9W3R7 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G018400 PE=3 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 4.8e-81 Identity = 170/182 (93.41%), Postives = 174/182 (95.60%), Query Frame = 0
BLAST of Carg00437 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein ) HSP 1 Score: 293.1 bits (749), Expect = 1.5e-79 Identity = 158/173 (91.33%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Carg00437 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein ) HSP 1 Score: 292.7 bits (748), Expect = 2.0e-79 Identity = 159/177 (89.83%), Postives = 168/177 (94.92%), Query Frame = 0
BLAST of Carg00437 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein ) HSP 1 Score: 277.3 bits (708), Expect = 8.6e-75 Identity = 158/203 (77.83%), Postives = 166/203 (81.77%), Query Frame = 0
BLAST of Carg00437 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 ) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-17 Identity = 53/151 (35.10%), Postives = 90/151 (59.60%), Query Frame = 0
BLAST of Carg00437 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein ) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-17 Identity = 53/151 (35.10%), Postives = 90/151 (59.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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