Homology
BLAST of Carg00402 vs. NCBI nr
Match:
KAG7031745.1 (KH domain-containing protein HEN4, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 825.1 bits (2130), Expect = 2.8e-235
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL
Sbjct: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE
Sbjct: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEPAGSVVKQMSSD 180
ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEPAGSVVKQMSSD
Sbjct: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEPAGSVVKQMSSD 180
Query: 181 SGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPKHKRQAVTSKLLKCAA 240
SGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPKHKRQAVTSKLLKCAA
Sbjct: 181 SGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPKHKRQAVTSKLLKCAA 240
Query: 241 EDEEVVQINGEPEAVQDAMLQITTLLRHHFFRDAFPSLDALSGIPSLSDLRDDQPPFLHR 300
EDEEVVQINGEPEAVQDAMLQITTLLRHHFFRDAFPSLDALSGIPSLSDLRDDQPPFLHR
Sbjct: 241 EDEEVVQINGEPEAVQDAMLQITTLLRHHFFRDAFPSLDALSGIPSLSDLRDDQPPFLHR 300
Query: 301 PGASLLSDRKPWSSQGGRVEGGVGLPDFAGAHRRRMAGFGGGNNPAIITSTTVEVVLPRN 360
PGASLLSDRKPWSSQGGRVEGGVGLPDFAGAHRRRMAGFGGGNNPAIITSTTVEVVLPRN
Sbjct: 301 PGASLLSDRKPWSSQGGRVEGGVGLPDFAGAHRRRMAGFGGGNNPAIITSTTVEVVLPRN 360
Query: 361 LVPVICGENGECLRQIRQVSDAKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFVIS 420
LVPVICGENGECLRQIRQVSDAKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFVIS
Sbjct: 361 LVPVICGENGECLRQIRQVSDAKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFVIS 420
Query: 421 ETESS 426
ETESS
Sbjct: 421 ETESS 425
BLAST of Carg00402 vs. NCBI nr
Match:
XP_038896749.1 (KH domain-containing protein HEN4-like [Benincasa hispida])
HSP 1 Score: 549.3 bits (1414), Expect = 3.0e-152
Identity = 352/695 (50.65%), Postives = 380/695 (54.68%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDR+FVK NGKGKW K GSRSQN+SFKLSPGYAVFRVLF VSRIGSL
Sbjct: 1 MSAPLTPSKRSRDRTFVKSNGKGKWQKS-SGSRSQNRSFKLSPGYAVFRVLFPVSRIGSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
+G DGD LS+IREETGVEIRVE+TV G +E++VVI Q+TEVNPEQ +KED KNSEVE
Sbjct: 61 VGRDGDGLSKIREETGVEIRVEDTVPGCDERVVVIGDSKQDTEVNPEQKSKEDNKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEP----------- 180
EN DIA+ K KEDKDSPP+ED KQKEV HLQLRKALFLVSEK FDEEP
Sbjct: 121 ENDGDIAKLKNKEDKDSPPVEDAKQKEVSHLQLRKALFLVSEKIFDEEPEADGTDVEGDK 180
Query: 181 ---------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV---- 240
GSVVKQMSSDSGAQIRILPRDKLP A ++DELV
Sbjct: 181 LPTFVLRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFATTNDELVQISG 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 GIDVVKKALELVFQQLIENSPNDKDPVASSNAAQSSHSSGQSLSRARESPLGSGSFSTHG 300
Query: 301 -PYSVPRDVGNFRSSVPSLAPKH------------------------------------- 360
PYSVPRDVGNF SS PSLAPK
Sbjct: 301 GPYSVPRDVGNFHSSAPSLAPKQYETSIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAV 360
Query: 361 -----------------------------------------------------------K 420
K
Sbjct: 361 VKTLQQDTGCDIKVVEGAVDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAIPDSK 420
Query: 421 RQAVTSKLL-------------------------------------KCAAEDEEVVQING 426
Q + ++ L KCA EDEEVVQING
Sbjct: 421 EQNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQING 480
BLAST of Carg00402 vs. NCBI nr
Match:
XP_004136236.1 (KH domain-containing protein HEN4 [Cucumis sativus] >XP_011652608.1 KH domain-containing protein HEN4 [Cucumis sativus] >XP_031737869.1 KH domain-containing protein HEN4 [Cucumis sativus] >KAE8651408.1 hypothetical protein Csa_002321 [Cucumis sativus])
HSP 1 Score: 543.1 bits (1398), Expect = 2.1e-150
Identity = 348/694 (50.14%), Postives = 376/694 (54.18%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDRS VK NGKGKW K G +NQSFKLSPGYAVFRVLF VSRI SL
Sbjct: 1 MSAPLTPSKRSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
+G DGD LS+IREETGVEIRVE+T+ G +E+I VI G NQETEVNPE+ +KED KNSEVE
Sbjct: 61 VGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEP----------- 180
EN DIA+ KKKEDKDSPP+ED KQKEV H QLRKALFLVSEK FDEEP
Sbjct: 121 ENDGDIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDK 180
Query: 181 ---------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV---- 240
GSVVKQMSSDSGAQIRILPRDKLP A++ ELV
Sbjct: 181 LPTFILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELVQISG 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 GIDVVKKALELVFQQLIENPPNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSSFNTHGG 300
Query: 301 PYSVPRDVGNFRSSVPSLAPKH-------------------------------------- 360
PYSVPRDVGNF SS PSLAPK
Sbjct: 301 PYSVPRDVGNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIV 360
Query: 361 ----------------------------------------------------------KR 420
K
Sbjct: 361 KTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAAADSKE 420
Query: 421 QAVTSKLL-------------------------------------KCAAEDEEVVQINGE 426
Q + ++ L KCA EDEEVVQINGE
Sbjct: 421 QNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGE 480
BLAST of Carg00402 vs. NCBI nr
Match:
XP_008466099.1 (PREDICTED: KH domain-containing protein At4g18375-like [Cucumis melo])
HSP 1 Score: 541.2 bits (1393), Expect = 8.0e-150
Identity = 346/694 (49.86%), Postives = 374/694 (53.89%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDRS VK NGKGKW K +NQ FKLSPGYAVFRVLF VSRI SL
Sbjct: 1 MSAPLTPSKRSRDRSSVKSNGKGKWQKSSSSRSRRNQPFKLSPGYAVFRVLFPVSRIDSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
+G DGD LS+IREETGVEIRVE+T+ G +E+I VI G NQETEVNPE+ +KED KNSEVE
Sbjct: 61 VGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEP----------- 180
EN DIA+ KKKEDKDSPP+ED KQKEV H QLRKALFLVSEK FDEEP
Sbjct: 121 ENDGDIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDK 180
Query: 181 ---------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV---- 240
GSVVKQMSSDSGAQIRILPRDKLP A++DELV
Sbjct: 181 LPTFVLRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNDELVQISG 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 GIDVVKKALELVFQQLIENPPNDKDPVSSSNAAQSSRSSGQSLSRAHESPRGSSINTHGG 300
Query: 301 PYSVPRDVGNFRSSVPSLAPKH-------------------------------------- 360
PYSVPRDVGNF SS PSLAPK
Sbjct: 301 PYSVPRDVGNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIV 360
Query: 361 ----------------------------------------------------------KR 420
K
Sbjct: 361 KTLQQDTGCDINVVDGASDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAAADSKE 420
Query: 421 QAVTSKLL-------------------------------------KCAAEDEEVVQINGE 426
Q + ++ L KCA EDEEVVQINGE
Sbjct: 421 QNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGE 480
BLAST of Carg00402 vs. NCBI nr
Match:
XP_022159704.1 (KH domain-containing protein HEN4-like [Momordica charantia])
HSP 1 Score: 533.9 bits (1374), Expect = 1.3e-147
Identity = 350/695 (50.36%), Postives = 380/695 (54.68%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDR+FVKPNGKGKW K GSRS+NQS KLSPGYAVFRVLF SRIGSL
Sbjct: 1 MSAPLTPSKRSRDRNFVKPNGKGKWQKS-SGSRSKNQSLKLSPGYAVFRVLFPASRIGSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
IG DG+VLSQIREETGVE+RVE+ + G +E+IVV+ G NQETEVNPEQN+KED KNSEVE
Sbjct: 61 IGRDGNVLSQIREETGVEVRVEDPIPGCDERIVVVGGSNQETEVNPEQNSKEDNKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGK-QKEVPHLQLRKALFLVSEKFFDEEP---------- 180
EN DIAE KKKEDKDS P+ED K +KEV +LQL+KALFLVSEK FDEEP
Sbjct: 121 ENEGDIAEQKKKEDKDSLPVEDAKFRKEVTNLQLQKALFLVSEKIFDEEPEVDGTDVEGD 180
Query: 181 ----------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV--- 240
GSVVKQMSSDSGAQIRILPRDKLP+ ASSDELV
Sbjct: 181 KMSTFVLRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPSFTASSDELVQII 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 GGIDVVKKALELVSQQLMENSAHESDLVSSSMSAQSLHSSGQSLSRGHEYPLGSSSSYTH 300
Query: 301 --PYSVPRDVGNFRSSVPSLAPKH------------------------------------ 360
PYSVPRDVGNF SS PSLAPK
Sbjct: 301 GGPYSVPRDVGNFHSSAPSLAPKQYETSIPGRLKPSLEILSFRLLCPTERVGNVIGKGGA 360
Query: 361 ------------------------------------------------------------ 420
Sbjct: 361 VVKTLQQETGCDIKVVEGALDSEDRIILVSGPAHPEDRISPVQDAVFRVQARIVKAVPDS 420
Query: 421 KRQAVTSKLL-------------------------------------KCAAEDEEVVQIN 425
K Q + ++LL KCA EDEEVVQ+N
Sbjct: 421 KEQNLVARLLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQVPKCAGEDEEVVQMN 480
BLAST of Carg00402 vs. ExPASy Swiss-Prot
Match:
F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 2.1e-15
Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = 0
Query: 324 GLPDFAGAHRRRMAG--FGGGNNPAIITSTTVEVVLPRNLVPVICGENGECLRQIRQVSD 383
GL D +G AG G G+ AI+T+TTVE+ +P N + + GE G L Q+RQ+S
Sbjct: 747 GLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISG 806
Query: 384 AKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFVIS 421
A++ I EP G + +++ISGTP+QT AAQ+L+ AF+++
Sbjct: 807 ARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILT 845
HSP 2 Score: 53.9 bits (128), Expect = 5.1e-06
Identity = 52/171 (30.41%), Postives = 88/171 (51.46%), Query Frame = 0
Query: 44 GYAVFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIV-VIAGPNQET 103
G+A FR+L +S +G++IG G+V+ Q+++ TG +IRVEE GS ++++ +IA + ++
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 104 EVNPEQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKA--LFLV 163
V NN NG+ AE +KKE++ G +V L +A +V
Sbjct: 105 RVKLGANN-----------NGN--AEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVV 164
Query: 164 SEKFFDEEPAGSV-------VKQMSSDSGAQIRILPRDKLPTCAASSDELV 205
+ AG+V V + ++G +I I + LP CA + DE+V
Sbjct: 165 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMV 201
BLAST of Carg00402 vs. ExPASy Swiss-Prot
Match:
Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 6.0e-15
Identity = 96/397 (24.18%), Postives = 167/397 (42.07%), Query Frame = 0
Query: 47 VFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNP 106
VF++L +I ++G ++ ++ E GV++RV + V GS+E+I+ I+ ++E +P
Sbjct: 326 VFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITIS--SEEAPDDP 385
Query: 107 EQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFD 166
+E + ++ D+ DKD +L + L +
Sbjct: 386 FFPAQEALLH--IQTQIIDLI-----PDKD-------------NLITTRLLVPSRDSICL 445
Query: 167 EEPAGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPKH 226
E AGS V ++S +G ++IL R+++P CA+ +D
Sbjct: 446 EGKAGS-VSEISRLTGTSVQILAREEIPRCASIND------------------------- 505
Query: 227 KRQAVTSKLLKCAAEDEEVVQINGEPEAVQDAMLQITTLLRHHFFRD---------AFPS 286
V+QI GE A ++A++++T LLR H F++ + +
Sbjct: 506 -----------------VVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPPASTST 565
Query: 287 LDALSGIPSLSDLRDDQPPFLHRPGASLLSDRKPWSSQGGRVEGGVGLPDF--------- 346
L G+ + ++ R G P SS + LP F
Sbjct: 566 TGPLEGVAGVMEVASSNNTIQSREG--------PTSSNLNLQQVSTILPQFKEGFGSVAK 625
Query: 347 --AGAHRRRMAGFGGGNNPAIITSTTVEVVLPRNLVPVICGENGECLRQIRQVSDAKITI 406
HR + ++T +T+EVVLP +VP + ++ L QI + S A +TI
Sbjct: 626 AGESEHREEVPVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTI 649
Query: 407 SEPKQGAVETLVIISGTPEQTHAAQSLIQAFVISETE 424
E + + ++ ISGTPEQ AQSL+Q F++S E
Sbjct: 686 VEDRPEETQNIIRISGTPEQAERAQSLLQGFILSIQE 649
BLAST of Carg00402 vs. ExPASy Swiss-Prot
Match:
Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 1.1e-08
Identity = 100/409 (24.45%), Postives = 171/409 (41.81%), Query Frame = 0
Query: 43 PGYAVFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQ-E 102
PG VFR++ V+++G++IG GD + ++ EET I+V + + ++IV+I+G + E
Sbjct: 71 PGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPE 130
Query: 103 TEVNPEQNN--KEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFL 162
++P + + ++ S + +N DD + +++ + + V Q A+ L
Sbjct: 131 AYMSPAMDAVLRVFRRVSGLPDNDDD-------DVQNAGSVFSSVRLLVASTQ---AINL 190
Query: 163 VSEKFFDEEPAGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSV 222
+ ++ GS++K + +SGA +RIL S+E P+
Sbjct: 191 IGKQ-------GSLIKSIVENSGASVRIL-----------SEEETPF------------- 250
Query: 223 PSLAPKHKRQAVTSKLLKCAAEDEEVVQINGEPEAVQDAMLQITTLLRHHFFRDAFPSLD 282
AA+DE +V + GE + A+ I LR L
Sbjct: 251 ------------------YAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHTVVPLF 310
Query: 283 ALSGIPSLSDLRDDQP------------PFLHRPGASLLSDRKP-WSSQGGRVE-----G 342
+ +S R ++P L P SLL+ R+P + + RV+
Sbjct: 311 EKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSRVDSRVQPS 370
Query: 343 GVGL----PDFAGAHRRRMAGFGGGNNPAIITSTTVEVVLPRNLVPVICGENGECLRQIR 402
GV + P + H +A + A +T + + +P + I G G + IR
Sbjct: 371 GVSIYSQDPVLSARHSPGLARV----SSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIR 412
Query: 403 QVSDAKITISE---PKQGAVETLVIISGTPEQTHAAQSLIQAFVISETE 424
+ S A ITI E P Q VE I GT Q A+ LIQ F+I+ E
Sbjct: 431 RRSGATITIKESPHPDQITVE----IKGTTSQVQTAEQLIQEFIINHKE 412
BLAST of Carg00402 vs. ExPASy Swiss-Prot
Match:
Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 1.9e-05
Identity = 86/400 (21.50%), Postives = 148/400 (37.00%), Query Frame = 0
Query: 43 PGYAVFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQET 102
PG VFR+L ++GS+IG GDV+ +I EET I++ + G+ E+ V+++G +
Sbjct: 184 PGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPE 243
Query: 103 EVNPEQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSE 162
P + + + + + D A + PP + + VP Q A L+ +
Sbjct: 244 SSLPPSMDGLLRVHMRIVDGLDGEA------SQAPPPSKVSTRLLVPASQ---AGSLIGK 303
Query: 163 KFFDEEPAGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSL 222
+ G VK + S +R+L + LP
Sbjct: 304 Q-------GGTVKAIQEASACIVRVLGSEDLPV--------------------------- 363
Query: 223 APKHKRQAVTSKLLKCAAEDEEVVQINGEPEAVQDAMLQITTLLRHHFF-RDAFPSLDAL 282
A +D+ VV++ GEP +V A+ I + LR R P +
Sbjct: 364 ---------------FALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQ 423
Query: 283 SGIPSLS------DLRDDQPPFLHRP---GASLLSDRKPWSSQGGRVEGGVGLPDFAGAH 342
P+ + PP H P G + P+ R + P+
Sbjct: 424 MQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPP 483
Query: 343 RRR-----MAGFG---------GGNNPAIITSTTVEVVLPRNLVPVICGENGECLRQIRQ 402
+ ++ +G P + T ++ +P + + G +G + R+
Sbjct: 484 MEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRR 525
Query: 403 VSDAKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFV 419
+S A +TI E + E V +SGT Q A LIQ F+
Sbjct: 544 LSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
BLAST of Carg00402 vs. ExPASy Swiss-Prot
Match:
P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 1.9e-05
Identity = 78/392 (19.90%), Postives = 151/392 (38.52%), Query Frame = 0
Query: 47 VFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNP 106
V+R+L + +G +IG G V++ IR T +I+V + +HG +++++ I
Sbjct: 37 VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITI----------- 96
Query: 107 EQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFD 166
V+E ++I K + + P + AL V +
Sbjct: 97 ---------YCSVKEKQEEIGFTKSENE--------------PLCCAQDALLKVYDAIVA 156
Query: 167 EEPAGSVVKQMSSDSGAQIRIL-PRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPK 226
+ + + D + R+L P + + + E ++ R R+SV K
Sbjct: 157 SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGE----NIKRIRRRTRASV-----K 216
Query: 227 HKRQAVTSKLLKCAAEDEEVVQINGEPEAVQDAMLQITTLLRHHFFRDAFPSLDALSGIP 286
+ V+ CA E + VV I+GEPE+V+ A+ ++ ++ R+ P +P
Sbjct: 217 VVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVP 276
Query: 287 SLSDLRDDQPPFLHRPGASLLSDRKPWSSQGGRVE---GGVGLPDFAGAHRRR------- 346
+ S + P S++ QG V + + DF G
Sbjct: 277 AASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVF 336
Query: 347 ------MAGFGGGNNPAIITSTTVEVVLPRNLVPVICGENGECLRQIRQVSDAKITI--S 406
GFGG + +V+ P + + G+ G +++IR+ S + I + S
Sbjct: 337 ASSLPVTHGFGGSSRS---EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDS 382
Query: 407 EPKQGAVETLVIISGTPEQTHAAQSLIQAFVI 420
K G E ++I++ T ++A ++
Sbjct: 397 RTKCGDDECVIIVTATESPDDMKSMAVEAVLL 382
BLAST of Carg00402 vs. ExPASy TrEMBL
Match:
A0A0A0LJT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G894490 PE=4 SV=1)
HSP 1 Score: 543.1 bits (1398), Expect = 1.0e-150
Identity = 348/694 (50.14%), Postives = 376/694 (54.18%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDRS VK NGKGKW K G +NQSFKLSPGYAVFRVLF VSRI SL
Sbjct: 53 MSAPLTPSKRSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSL 112
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
+G DGD LS+IREETGVEIRVE+T+ G +E+I VI G NQETEVNPE+ +KED KNSEVE
Sbjct: 113 VGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVE 172
Query: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEP----------- 180
EN DIA+ KKKEDKDSPP+ED KQKEV H QLRKALFLVSEK FDEEP
Sbjct: 173 ENDGDIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDK 232
Query: 181 ---------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV---- 240
GSVVKQMSSDSGAQIRILPRDKLP A++ ELV
Sbjct: 233 LPTFILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELVQISG 292
Query: 241 ------------------------------------------------------------ 300
Sbjct: 293 GIDVVKKALELVFQQLIENPPNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSSFNTHGG 352
Query: 301 PYSVPRDVGNFRSSVPSLAPKH-------------------------------------- 360
PYSVPRDVGNF SS PSLAPK
Sbjct: 353 PYSVPRDVGNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIV 412
Query: 361 ----------------------------------------------------------KR 420
K
Sbjct: 413 KTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAAADSKE 472
Query: 421 QAVTSKLL-------------------------------------KCAAEDEEVVQINGE 426
Q + ++ L KCA EDEEVVQINGE
Sbjct: 473 QNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGE 532
BLAST of Carg00402 vs. ExPASy TrEMBL
Match:
A0A1S3CRU9 (KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103503624 PE=4 SV=1)
HSP 1 Score: 541.2 bits (1393), Expect = 3.9e-150
Identity = 346/694 (49.86%), Postives = 374/694 (53.89%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDRS VK NGKGKW K +NQ FKLSPGYAVFRVLF VSRI SL
Sbjct: 1 MSAPLTPSKRSRDRSSVKSNGKGKWQKSSSSRSRRNQPFKLSPGYAVFRVLFPVSRIDSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
+G DGD LS+IREETGVEIRVE+T+ G +E+I VI G NQETEVNPE+ +KED KNSEVE
Sbjct: 61 VGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEP----------- 180
EN DIA+ KKKEDKDSPP+ED KQKEV H QLRKALFLVSEK FDEEP
Sbjct: 121 ENDGDIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDK 180
Query: 181 ---------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV---- 240
GSVVKQMSSDSGAQIRILPRDKLP A++DELV
Sbjct: 181 LPTFVLRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNDELVQISG 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 GIDVVKKALELVFQQLIENPPNDKDPVSSSNAAQSSRSSGQSLSRAHESPRGSSINTHGG 300
Query: 301 PYSVPRDVGNFRSSVPSLAPKH-------------------------------------- 360
PYSVPRDVGNF SS PSLAPK
Sbjct: 301 PYSVPRDVGNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIV 360
Query: 361 ----------------------------------------------------------KR 420
K
Sbjct: 361 KTLQQDTGCDINVVDGASDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAAADSKE 420
Query: 421 QAVTSKLL-------------------------------------KCAAEDEEVVQINGE 426
Q + ++ L KCA EDEEVVQINGE
Sbjct: 421 QNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGE 480
BLAST of Carg00402 vs. ExPASy TrEMBL
Match:
A0A6J1E343 (KH domain-containing protein HEN4-like OS=Momordica charantia OX=3673 GN=LOC111026043 PE=4 SV=1)
HSP 1 Score: 533.9 bits (1374), Expect = 6.2e-148
Identity = 350/695 (50.36%), Postives = 380/695 (54.68%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDR+FVKPNGKGKW K GSRS+NQS KLSPGYAVFRVLF SRIGSL
Sbjct: 1 MSAPLTPSKRSRDRNFVKPNGKGKWQKS-SGSRSKNQSLKLSPGYAVFRVLFPASRIGSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
IG DG+VLSQIREETGVE+RVE+ + G +E+IVV+ G NQETEVNPEQN+KED KNSEVE
Sbjct: 61 IGRDGNVLSQIREETGVEVRVEDPIPGCDERIVVVGGSNQETEVNPEQNSKEDNKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGK-QKEVPHLQLRKALFLVSEKFFDEEP---------- 180
EN DIAE KKKEDKDS P+ED K +KEV +LQL+KALFLVSEK FDEEP
Sbjct: 121 ENEGDIAEQKKKEDKDSLPVEDAKFRKEVTNLQLQKALFLVSEKIFDEEPEVDGTDVEGD 180
Query: 181 ----------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV--- 240
GSVVKQMSSDSGAQIRILPRDKLP+ ASSDELV
Sbjct: 181 KMSTFVLRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPSFTASSDELVQII 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 GGIDVVKKALELVSQQLMENSAHESDLVSSSMSAQSLHSSGQSLSRGHEYPLGSSSSYTH 300
Query: 301 --PYSVPRDVGNFRSSVPSLAPKH------------------------------------ 360
PYSVPRDVGNF SS PSLAPK
Sbjct: 301 GGPYSVPRDVGNFHSSAPSLAPKQYETSIPGRLKPSLEILSFRLLCPTERVGNVIGKGGA 360
Query: 361 ------------------------------------------------------------ 420
Sbjct: 361 VVKTLQQETGCDIKVVEGALDSEDRIILVSGPAHPEDRISPVQDAVFRVQARIVKAVPDS 420
Query: 421 KRQAVTSKLL-------------------------------------KCAAEDEEVVQIN 425
K Q + ++LL KCA EDEEVVQ+N
Sbjct: 421 KEQNLVARLLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQVPKCAGEDEEVVQMN 480
BLAST of Carg00402 vs. ExPASy TrEMBL
Match:
A0A6J1F912 (KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC111443416 PE=4 SV=1)
HSP 1 Score: 529.3 bits (1362), Expect = 1.5e-146
Identity = 343/695 (49.35%), Postives = 373/695 (53.67%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDR+ VK NGKGKW K GSRS QSFKLSPGYAVFRVLF VSRI SL
Sbjct: 1 MSAPLTPSKRSRDRNIVKSNGKGKWQK-TSGSRSHKQSFKLSPGYAVFRVLFPVSRIDSL 60
Query: 61 IGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVE 120
+GGDGDVLS+I EETGVEIRVE+T+ G +E+IVVI G NQETEVNPE+ NKED KNSEVE
Sbjct: 61 VGGDGDVLSKISEETGVEIRVEDTIPGCDERIVVIGGSNQETEVNPEEKNKEDNKNSEVE 120
Query: 121 ENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEP----------- 180
EN D AE KKEDK S P E+ KQKEVP+LQLRKALFLVSEK FDEEP
Sbjct: 121 ENEGDNAEWTKKEDKVSLPGEESKQKEVPYLQLRKALFLVSEKIFDEEPEADGVDVESDK 180
Query: 181 ---------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV---- 240
GSV+KQMSSDSGAQIRILPRDKLP CA SSDELV
Sbjct: 181 LSTFVLRLLVLSSQVGCLLGKGGSVIKQMSSDSGAQIRILPRDKLPPCATSSDELVQISG 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 GNDVVKRALELVFQQLIENSPHDKDPVTSSMTAQSSHSSGQSRSWAHDYPLGSSSFNAHA 300
Query: 301 -PYSVPRDVGNFRSSVPSLA---------------------------------------- 360
PYSVPR+VGNF SS PSLA
Sbjct: 301 GPYSVPREVGNFHSSTPSLALNKQYETSIPGRIKPSQEILSFRLLCPSERVGNVIGKGGV 360
Query: 361 ---------------------------------------------------------PKH 420
P
Sbjct: 361 VVKALQQETGCDIKVIESALDPDDRIILVTGPANPDDRISPVQDAVFRVQARIVKAVPDS 420
Query: 421 KRQAVTSKLL-------------------------------------KCAAEDEEVVQIN 425
K Q + ++ L KC EDEE+VQIN
Sbjct: 421 KEQNLVARFLVYSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQVPKCVGEDEEMVQIN 480
BLAST of Carg00402 vs. ExPASy TrEMBL
Match:
A0A6J1IFP2 (KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC111476526 PE=4 SV=1)
HSP 1 Score: 528.5 bits (1360), Expect = 2.6e-146
Identity = 346/698 (49.57%), Postives = 373/698 (53.44%), Query Frame = 0
Query: 1 MSSPLTPSKRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSL 60
MS+PLTPSKRSRDR+ VK NGKGKW K GSRS QSFKLSPGYAVFRVLF VSRI SL
Sbjct: 1 MSAPLTPSKRSRDRNIVKSNGKGKWQK-TSGSRSHKQSFKLSPGYAVFRVLFPVSRIDSL 60
Query: 61 IG--GDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSE 120
G GDGDVLS+I EETGVEIRVE+T+ G +E+IVVI G NQETEVNPE+ KED KNSE
Sbjct: 61 AGGDGDGDVLSKISEETGVEIRVEDTIPGCDERIVVIGGSNQETEVNPEEKRKEDNKNSE 120
Query: 121 VEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEP--------- 180
VEEN D AE KKEDK S P E+ KQKEVP+LQLRKALFLVSEK FDEEP
Sbjct: 121 VEENEGDNAEWTKKEDKVSLPGEESKQKEVPYLQLRKALFLVSEKIFDEEPEADGADVEG 180
Query: 181 -----------------------AGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELV-- 240
GSV+KQMSSDSGAQIRILPRDKLP CA SSDELV
Sbjct: 181 DKLSTFVLRLLVFSSQVGCLLGKGGSVIKQMSSDSGAQIRILPRDKLPPCATSSDELVQI 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 SGGNDVVKRALELVFQQLIENSPHDKDPVASSMTAQSSHSSGQSRSWAHDYLLGSSSFNA 300
Query: 301 ---PYSVPRDVGNFRSSVPSLAPK------------------------------------ 360
PYSVPR+VGNF SS PSLAP
Sbjct: 301 HAGPYSVPREVGNFHSSTPSLAPNKQYETSIPGRIKPSQEILSFRLLCPSERVGNVIGKG 360
Query: 361 ------------------------------------------------------------ 420
Sbjct: 361 GVVVKALQQETGCDIKVIESALDPDDRIILVTGPANPDDRISPVQDAVFRVQARIVKAVP 420
Query: 421 -HKRQAVTSKLL-------------------------------------KCAAEDEEVVQ 426
K Q + ++ L KC EDEE+VQ
Sbjct: 421 DSKEQNMVARFLVYSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQVPKCVGEDEEMVQ 480
BLAST of Carg00402 vs. TAIR 10
Match:
AT1G51580.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 88.6 bits (218), Expect = 1.3e-17
Identity = 108/408 (26.47%), Postives = 160/408 (39.22%), Query Frame = 0
Query: 48 FRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVI-AGPNQETEVNP 107
FR+L ++GSLIG G V+ ++ E+G I+V + H S E+I+VI A N E +
Sbjct: 278 FRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSL 337
Query: 108 EQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFD 167
Q+ N VE + A + SP + K
Sbjct: 338 AQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGK-------------------- 397
Query: 168 EEPAGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPKH 227
G ++ +M +GA IR+ +D+ A K+
Sbjct: 398 ---GGHLISEMRRATGASIRVFAKDQ------------------------------ATKY 457
Query: 228 KRQAVTSKLLKCAAEDEEVVQINGEPEAVQDAMLQITTLLRHHFFRDAFPSLDALSGIPS 287
+ Q +E+VQ+ G + VQDA+ QI LR F P + G P
Sbjct: 458 ESQ------------HDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLP-FQGMGGPPP 517
Query: 288 --LSDLRDDQPPF-----------------------LHRPGASLLS----DRKP----WS 347
+ + PPF H PG DR P W+
Sbjct: 518 PFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSWT 577
Query: 348 SQGG--RVEGGVGLPDFAGAHRRRMAGFGGGNNPAIITSTTVEVVLPRNLVPVICGENGE 407
Q G GG+ PD R G N ++TS VE+V+P+ + + GEN
Sbjct: 578 PQPGIDGHPGGMVPPDVNHGFALRNEPIGSEN--PVMTSANVEIVIPQAYLGHVYGENCS 617
Query: 408 CLRQIRQVSDAKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFVI 420
L I+QVS A + + +PK G E LV++SGT +Q H AQSL+ AF++
Sbjct: 638 NLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFIL 617
BLAST of Carg00402 vs. TAIR 10
Match:
AT5G64390.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 85.1 bits (209), Expect = 1.5e-16
Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = 0
Query: 324 GLPDFAGAHRRRMAG--FGGGNNPAIITSTTVEVVLPRNLVPVICGENGECLRQIRQVSD 383
GL D +G AG G G+ AI+T+TTVE+ +P N + + GE G L Q+RQ+S
Sbjct: 747 GLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISG 806
Query: 384 AKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFVIS 421
A++ I EP G + +++ISGTP+QT AAQ+L+ AF+++
Sbjct: 807 ARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILT 845
HSP 2 Score: 53.9 bits (128), Expect = 3.6e-07
Identity = 52/171 (30.41%), Postives = 88/171 (51.46%), Query Frame = 0
Query: 44 GYAVFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIV-VIAGPNQET 103
G+A FR+L +S +G++IG G+V+ Q+++ TG +IRVEE GS ++++ +IA + ++
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 104 EVNPEQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKA--LFLV 163
V NN NG+ AE +KKE++ G +V L +A +V
Sbjct: 105 RVKLGANN-----------NGN--AEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVV 164
Query: 164 SEKFFDEEPAGSV-------VKQMSSDSGAQIRILPRDKLPTCAASSDELV 205
+ AG+V V + ++G +I I + LP CA + DE+V
Sbjct: 165 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMV 201
BLAST of Carg00402 vs. TAIR 10
Match:
AT5G53060.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 83.6 bits (205), Expect = 4.3e-16
Identity = 96/397 (24.18%), Postives = 167/397 (42.07%), Query Frame = 0
Query: 47 VFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNP 106
VF++L +I ++G ++ ++ E GV++RV + V GS+E+I+ I+ ++E +P
Sbjct: 326 VFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITIS--SEEAPDDP 385
Query: 107 EQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFD 166
+E + ++ D+ DKD +L + L +
Sbjct: 386 FFPAQEALLH--IQTQIIDLI-----PDKD-------------NLITTRLLVPSRDSICL 445
Query: 167 EEPAGSVVKQMSSDSGAQIRILPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPKH 226
E AGS V ++S +G ++IL R+++P CA+ +D
Sbjct: 446 EGKAGS-VSEISRLTGTSVQILAREEIPRCASIND------------------------- 505
Query: 227 KRQAVTSKLLKCAAEDEEVVQINGEPEAVQDAMLQITTLLRHHFFRD---------AFPS 286
V+QI GE A ++A++++T LLR H F++ + +
Sbjct: 506 -----------------VVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPPASTST 565
Query: 287 LDALSGIPSLSDLRDDQPPFLHRPGASLLSDRKPWSSQGGRVEGGVGLPDF--------- 346
L G+ + ++ R G P SS + LP F
Sbjct: 566 TGPLEGVAGVMEVASSNNTIQSREG--------PTSSNLNLQQVSTILPQFKEGFGSVAK 625
Query: 347 --AGAHRRRMAGFGGGNNPAIITSTTVEVVLPRNLVPVICGENGECLRQIRQVSDAKITI 406
HR + ++T +T+EVVLP +VP + ++ L QI + S A +TI
Sbjct: 626 AGESEHREEVPVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTI 649
Query: 407 SEPKQGAVETLVIISGTPEQTHAAQSLIQAFVISETE 424
E + + ++ ISGTPEQ AQSL+Q F++S E
Sbjct: 686 VEDRPEETQNIIRISGTPEQAERAQSLLQGFILSIQE 649
BLAST of Carg00402 vs. TAIR 10
Match:
AT5G64390.3 (RNA-binding KH domain-containing protein )
HSP 1 Score: 81.6 bits (200), Expect = 1.6e-15
Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 0
Query: 324 GLPDFAGAHRRRMAG-----------FGGGNNPAIITSTTVEVVLPRNLVPVICGENGEC 383
GL D +G AG F G+ AI+T+TTVE+ +P N + + GE G
Sbjct: 747 GLSDASGGLSSARAGHVLGSLHARLVFSSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYN 806
Query: 384 LRQIRQVSDAKITISEPKQGAVETLVIISGTPEQTHAAQSLIQAFVIS 421
L Q+RQ+S A++ I EP G + +++ISGTP+QT AAQ+L+ AF+++
Sbjct: 807 LEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILT 854
HSP 2 Score: 53.9 bits (128), Expect = 3.6e-07
Identity = 52/171 (30.41%), Postives = 88/171 (51.46%), Query Frame = 0
Query: 44 GYAVFRVLFHVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSNEKIV-VIAGPNQET 103
G+A FR+L +S +G++IG G+V+ Q+++ TG +IRVEE GS ++++ +IA + ++
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104
Query: 104 EVNPEQNNKEDKKNSEVEENGDDIAECKKKEDKDSPPLEDGKQKEVPHLQLRKA--LFLV 163
V NN NG+ AE +KKE++ G +V L +A +V
Sbjct: 105 RVKLGANN-----------NGN--AEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVV 164
Query: 164 SEKFFDEEPAGSV-------VKQMSSDSGAQIRILPRDKLPTCAASSDELV 205
+ AG+V V + ++G +I I + LP CA + DE+V
Sbjct: 165 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMV 201
BLAST of Carg00402 vs. TAIR 10
Match:
AT5G15270.2 (RNA-binding KH domain-containing protein )
HSP 1 Score: 68.9 bits (167), Expect = 1.1e-11
Identity = 99/409 (24.21%), Postives = 156/409 (38.14%), Query Frame = 0
Query: 9 KRSRDRSFVKPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFHVSRIGSLIGGDGDVL 68
KRSR +S NG G + G R S + VFR L V +IGS+IG GD++
Sbjct: 17 KRSRPQSDYDDNG-GSKRRYRGDDR---DSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIV 76
Query: 69 SQIREETGVEIRVEETVHGSNEKIVVIAGPNQETEVNPEQNNKEDKKNSEVEENGDD-IA 128
Q+R +T +IR+ E + G +E+++ I P+ ET + + D +A
Sbjct: 77 KQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVVA 136
Query: 129 ECKKKEDKDSPPLEDGKQKEVPHLQLRKALFLVSEKFFDEEPAGSVVKQMSSDSGAQIRI 188
+ + ED + + VP Q+ L G +V+ + S++GAQIRI
Sbjct: 137 DDARSEDSPEGEKQVTAKLLVPSDQIGCIL----------GRGGQIVQNIRSETGAQIRI 196
Query: 189 LPRDKLPTCAASSDELVPYSVPRDVGNFRSSVPSLAPKHKRQAVTSKLLKCAAEDEEVVQ 248
+ +P CA +SDEL +Q
Sbjct: 197 VKDRNMPLCALNSDEL------------------------------------------IQ 256
Query: 249 INGEPEAVQDAMLQITTLLRHHFFRDAFPSLDALSGIPSLSDLRDDQPPFLHRPGASLLS 308
I+GE V+ A+LQI + L + R L + G P+ S + G L
Sbjct: 257 ISGEVLIVKKALLQIASRLHENPSRSQ-NLLSSSGGYPAGS--------LMSHAGGPRLV 316
Query: 309 DRKPWSSQGGRVEGGVGLPDFAGAHRRRMAGFGGGNNPAIITSTTVEVVLPRNLVPVICG 368
P GR G P + N+P T + +V P + + G
Sbjct: 317 GLAPLMGSYGRDAGDWSRPLYQPPR----------NDPP-ATEFFIRLVSPVENIASVIG 349
Query: 369 ENGECLRQIRQVSDAKITISEPKQGAVETLVIISGTPEQTHAAQSLIQA 417
+ G + Q+RQ + A I + + + L+ IS A I+A
Sbjct: 377 KGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEA 349
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031745.1 | 2.8e-235 | 100.00 | KH domain-containing protein HEN4, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038896749.1 | 3.0e-152 | 50.65 | KH domain-containing protein HEN4-like [Benincasa hispida] | [more] |
XP_004136236.1 | 2.1e-150 | 50.14 | KH domain-containing protein HEN4 [Cucumis sativus] >XP_011652608.1 KH domain-co... | [more] |
XP_008466099.1 | 8.0e-150 | 49.86 | PREDICTED: KH domain-containing protein At4g18375-like [Cucumis melo] | [more] |
XP_022159704.1 | 1.3e-147 | 50.36 | KH domain-containing protein HEN4-like [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
F4KDN0 | 2.1e-15 | 43.43 | KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S... | [more] |
Q8W4B1 | 6.0e-15 | 24.18 | RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q9SZH4 | 1.1e-08 | 24.45 | RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q9SR13 | 1.9e-05 | 21.50 | Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... | [more] |
P58223 | 1.9e-05 | 19.90 | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LJT9 | 1.0e-150 | 50.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G894490 PE=4 SV=1 | [more] |
A0A1S3CRU9 | 3.9e-150 | 49.86 | KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103503... | [more] |
A0A6J1E343 | 6.2e-148 | 50.36 | KH domain-containing protein HEN4-like OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A6J1F912 | 1.5e-146 | 49.35 | KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC11144... | [more] |
A0A6J1IFP2 | 2.6e-146 | 49.57 | KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC1114765... | [more] |