Carg00384 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg00384
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein NONRESPONDING TO OXYLIPINS 2, mitochondrial
LocationCarg_Chr04: 6943612 .. 6945853 (+)
RNA-Seq ExpressionCarg00384
SyntenyCarg00384
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCGCTGTCGATCTCTTGCAACCCCAACTATTTCCCTCATCAAATCCACCTTAACCAAACCCTCCATTAAAGCAACACCAGCTTCTTTCTTCACTGTTCGTTCTTCGCCCACAATTTCCAGGCAAGCGAGTTTATTGATCACTTTTTTTTGCCCCATTAGTGAATTTTCTTTTCTTTGTGATTTTACCATTTACTTAGGGTTTAAGAGTGATTTGATTCTTCAGGTTGGTTCCGCGGTTGGGTTCCCTTGAATCTCTGCTTCCCCTTCATTCAGCAGTCTCTTCGGCGCGGCTAACTTCGTGTCTTGGAATCGATTCGGTGTCTTCGAGGTCATTGTCTCAGGGTATGCTCTGCAGTGCCAATCCAGGAGTTTGATATCTCCATTCTTTGTAATTTTTTATCTGTAAGCAACTTTTTAACTCTTGTATATGAATGGATTTTCTATTGTTTGTTATGATTCTCCCTAAATATAGTCCAATTTGAAGTTTTTTCCATTAGTTTATGTGTTAAGTTTTTCAGTACCACCTTTTCCCCCTCCAAGTATTTGCTCTGATTCGTATCTGCATCTCATTTGAAGGCCTGCTCGGATGACTGTTTCTCATTTGCTTGGGTTTACATATGGGTTTCAATACCTATTTCCCGGGCTTACGAAAGCAACTAAAATTGTAATTAAATTGACATTTGAAAGATGATAATTGATACTCCGTGGCCGAACTAGGGAATGTTGTCATATTATAAGAACTATCATTTACATTTGCTGTGCCAGTATTGAATTTTTATAGGATTTTTATAGTTTTCACTGAATGCATCGTTCATAGAACTCTTGGTTATGCACGTAGTATAAACTTGTATAGTGTTACATCCAATTGTCAATCTGCCCCTAAATGTGCTAATTTATACAGAGGCCTGATCGCATGTACTCTGCTTCAAGTTAGATATTGGTATTTTGCAAACAGTATCAGGAGGAGTTATGCTCCTTCAAAGTTCTTCTAATGTTGAAAATACGTACAAGAAGTCACATAAAGACTGTAGCAAGTGCTTTTCAAACTGGTCCTGGTCCCGGTCCTGTTATTTTAATATATGGGATTAATTTGTTGTGGGGATTTCATCTATGGTGTTTAAAAATCATTCTGTGGATTTTGCAACCTAAGCTTGCATTCTTCATAATTCAATATTTTTCGAGATACTAAAATGTTATTACATAGACATACAGAAAGTCTATTTATGGCAATTCAATATGCTCCAGTATGATCGGTTATTATTGAAACCAACAAATTTTCTTAAAGCATTCAAGTAGTTGTCAAGAATTTTGTTTTCATTGCTGTTGTAAGTGTTACTCTGGAACTTAGCATCAATCTAATCTTAGCTCCTGAAGGAAATATATTGAATTGGATCTTGAGAAAATGTAGCAGTTGATATGGATTATAGACTAGCTTTCATAGAAAGTAGATAACAACAATACCCATGTAGTGCATTAGTTGTAGTTAGATAGATGACTGATCACTATAAGAGGGAGCAACCCTAGGAGTGACTAGTGGTTATTTGGTGACATCATCTCTTAAATTAAAAGATCGAAGTATTTGCTTTCGTATGTATGGCCTTCCATATTAGATACTTTTACTTTATCTGACTTTCATCGGTCGTGAAGTACTTGGTTTAGTTGATTCGCAATCAGCATTATAGAGGATGATAGCATTTATTTGAACTCTGAAGTATCTCCTCCACTTGAAGTAAAATGCTGAAGTAATTCTGGTTTTTTCAATGTGTTTCAGAATTAGGTCTCTGTGTGCCGCGATAAGGGATGGAATTTAGGAGAATGCTCTGATTGAAGTGTGGTTATACACAAAAGGATGCCGAATCATACATTCTGTTCATCATATTGGAGCTGCCCCAGTATCTGTTTGTTGTTTAGGTTGAGGTTTATAACTGATGAGACAACTCCACTCCCGAATATGTTCCCCCAATTCATTACACTCACTTTTCCCATAATTTTTCTTATCTGAGTATTATCAACACCATATGACCCCCTAGCGAATAAGACTGATTACCCTCATTTTTCGGGTGGTTTTTCTTGGCTCTTCTCTTTGACTCTTTGAAGGAAACTCAGAATTTCATGAAATCCTTTTAAGATGTTCAAATTTGCTTGGCTATACTTATATTTTGCCTGCTTCTGAAATGGTAAATTTTGCTCTCGTTTATATTTTTGGGAAGGAAACTGATAAGCACAGGCTATGA

mRNA sequence

ATGGCTTCCCGCTGTCGATCTCTTGCAACCCCAACTATTTCCCTCATCAAATCCACCTTAACCAAACCCTCCATTAAAGCAACACCAGCTTCTTTCTTCACTGTTCGTTCTTCGCCCACAATTTCCAGGCAAGCGACAGTCTCTTCGGCGCGGCTAACTTCGTGTCTTGGAATCGATTCGGTGTCTTCGAGGTCATTGTCTCAGGTTTTCACTGAATGCATCGTTCATAGAACTCTTGGTTATGCACGTAGTATAAACTTGTATAGTGTTACATCCAATTGTCAATCTGCCCCTAAATGTGCTAATTTATACAGAGGCCTGATCGCATGTACTCTGCTTCAATATCAGGAGGAGTTATGCTCCTTCAAAGTTCTTCTAATGTTGAAAATACGTACAAGAAGTCACATAAAGACTGTAGCAAGTGCTTTTCAAACTGGTCCTGGTCCCGGTCCTGAAACTGATAAGCACAGGCTATGA

Coding sequence (CDS)

ATGGCTTCCCGCTGTCGATCTCTTGCAACCCCAACTATTTCCCTCATCAAATCCACCTTAACCAAACCCTCCATTAAAGCAACACCAGCTTCTTTCTTCACTGTTCGTTCTTCGCCCACAATTTCCAGGCAAGCGACAGTCTCTTCGGCGCGGCTAACTTCGTGTCTTGGAATCGATTCGGTGTCTTCGAGGTCATTGTCTCAGGTTTTCACTGAATGCATCGTTCATAGAACTCTTGGTTATGCACGTAGTATAAACTTGTATAGTGTTACATCCAATTGTCAATCTGCCCCTAAATGTGCTAATTTATACAGAGGCCTGATCGCATGTACTCTGCTTCAATATCAGGAGGAGTTATGCTCCTTCAAAGTTCTTCTAATGTTGAAAATACGTACAAGAAGTCACATAAAGACTGTAGCAAGTGCTTTTCAAACTGGTCCTGGTCCCGGTCCTGAAACTGATAAGCACAGGCTATGA

Protein sequence

MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRQATVSSARLTSCLGIDSVSSRSLSQVFTECIVHRTLGYARSINLYSVTSNCQSAPKCANLYRGLIACTLLQYQEELCSFKVLLMLKIRTRSHIKTVASAFQTGPGPGPETDKHRL
Homology
[Close]
BLAST of Carg00384 vs. NCBI nr
Match: KAG7031727.1 (hypothetical protein SDJN02_05768, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 4.0e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRQATVSSARLTSCLGIDS 60
           MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRQATVSSARLTSCLGIDS
Sbjct: 1   MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRQATVSSARLTSCLGIDS 60

Query: 61  VSSRSLSQVFTECIVHRTLGYARSINLYSVTSNCQSAPKCANLYRGLIACTLLQYQEELC 120
           VSSRSLSQVFTECIVHRTLGYARSINLYSVTSNCQSAPKCANLYRGLIACTLLQYQEELC
Sbjct: 61  VSSRSLSQVFTECIVHRTLGYARSINLYSVTSNCQSAPKCANLYRGLIACTLLQYQEELC 120

Query: 121 SFKVLLMLKIRTRSHIKTVASAFQTGPGPGPETDKHRL 159
           SFKVLLMLKIRTRSHIKTVASAFQTGPGPGPETDKHRL
Sbjct: 121 SFKVLLMLKIRTRSHIKTVASAFQTGPGPGPETDKHRL 158

[Close]
BLAST of Carg00384 vs. NCBI nr
Match: XP_022940104.1 (uncharacterized protein LOC111445824 isoform X2 [Cucurbita moschata] >XP_022981081.1 uncharacterized protein LOC111480335 isoform X2 [Cucurbita maxima] >XP_023523541.1 uncharacterized protein LOC111787734 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-19
Identity = 66/88 (75.00%), Postives = 68/88 (77.27%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
          MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR               + 
Sbjct: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRLVPRLGSLESLLPLHSA 60

Query: 61 VSSARLTSCLGIDSVSSRSLSQVFTECI 75
          VSSARLTSCLGIDSVSSRSLSQ    C+
Sbjct: 61 VSSARLTSCLGIDSVSSRSLSQELGLCV 88

[Close]
BLAST of Carg00384 vs. NCBI nr
Match: XP_022940103.1 (uncharacterized protein LOC111445824 isoform X1 [Cucurbita moschata] >XP_022981080.1 uncharacterized protein LOC111480335 isoform X1 [Cucurbita maxima] >XP_023523540.1 uncharacterized protein LOC111787734 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-19
Identity = 65/82 (79.27%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
          MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR               + 
Sbjct: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRLVPRLGSLESLLPLHSA 60

Query: 61 VSSARLTSCLGIDSVSSRSLSQ 69
          VSSARLTSCLGIDSVSSRSLSQ
Sbjct: 61 VSSARLTSCLGIDSVSSRSLSQ 82

[Close]
BLAST of Carg00384 vs. NCBI nr
Match: XP_038897119.1 (protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 88.2 bits (217), Expect = 6.9e-14
Identity = 56/88 (63.64%), Postives = 62/88 (70.45%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
          MASRCRSLATPTISLIKST+TKPSIK  PA+ FT+ SSPTISR               + 
Sbjct: 1  MASRCRSLATPTISLIKSTITKPSIKPRPAASFTLCSSPTISRSVPQLGSLQSLLPLHSA 60

Query: 61 VSSARLTSCLGIDSVSSRSLSQVFTECI 75
          VSSARL SCLGIDS+ SRSLSQ    C+
Sbjct: 61 VSSARLISCLGIDSLFSRSLSQELGLCV 88

[Close]
BLAST of Carg00384 vs. NCBI nr
Match: XP_008466067.1 (PREDICTED: uncharacterized protein LOC103503603 isoform X2 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 9.0e-14
Identity = 56/88 (63.64%), Postives = 63/88 (71.59%), Query Frame = 0 

Query: 1   MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
           MASR RSLATPTISLIKST+TKPSIK  PA+ FT+ SSPT+SR               + 
Sbjct: 35  MASRFRSLATPTISLIKSTITKPSIKPRPAASFTLCSSPTLSRSIPQLGSLQSLLPLHSA 94

Query: 61  VSSARLTSCLGIDSVSSRSLSQVFTECI 75
           VSSARLTSCLGIDS+SSRSLSQ    C+
Sbjct: 95  VSSARLTSCLGIDSLSSRSLSQELGLCV 122

[Close]
BLAST of Carg00384 vs. ExPASy Swiss-Prot
Match: Q6NNL9 (Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOXY2 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPA-SFFTVRSSPTISR--------------QA 60
          MASRCRSL+ P  S  +S + KPSI+   A SF  V  SP  SR               +
Sbjct: 1  MASRCRSLSKPAFSAFRSAMNKPSIRPKSASSFIGVPPSPGFSRPIGQLGSLQSLLPLYS 60

Query: 61 TVSSARLTSCLGIDSVSSRSLSQ 69
           V+SARLTSCLGIDS +SRSL+Q
Sbjct: 61 AVASARLTSCLGIDSQNSRSLAQ 83

[Close]
BLAST of Carg00384 vs. ExPASy TrEMBL
Match: A0A6J1IVH2 (uncharacterized protein LOC111480335 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480335 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.3e-20
Identity = 66/88 (75.00%), Postives = 68/88 (77.27%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
          MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR               + 
Sbjct: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRLVPRLGSLESLLPLHSA 60

Query: 61 VSSARLTSCLGIDSVSSRSLSQVFTECI 75
          VSSARLTSCLGIDSVSSRSLSQ    C+
Sbjct: 61 VSSARLTSCLGIDSVSSRSLSQELGLCV 88

[Close]
BLAST of Carg00384 vs. ExPASy TrEMBL
Match: A0A6J1FJ34 (uncharacterized protein LOC111445824 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445824 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.3e-20
Identity = 66/88 (75.00%), Postives = 68/88 (77.27%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
          MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR               + 
Sbjct: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRLVPRLGSLESLLPLHSA 60

Query: 61 VSSARLTSCLGIDSVSSRSLSQVFTECI 75
          VSSARLTSCLGIDSVSSRSLSQ    C+
Sbjct: 61 VSSARLTSCLGIDSVSSRSLSQELGLCV 88

[Close]
BLAST of Carg00384 vs. ExPASy TrEMBL
Match: A0A6J1IYG2 (uncharacterized protein LOC111480335 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480335 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-19
Identity = 65/82 (79.27%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
          MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR               + 
Sbjct: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRLVPRLGSLESLLPLHSA 60

Query: 61 VSSARLTSCLGIDSVSSRSLSQ 69
          VSSARLTSCLGIDSVSSRSLSQ
Sbjct: 61 VSSARLTSCLGIDSVSSRSLSQ 82

[Close]
BLAST of Carg00384 vs. ExPASy TrEMBL
Match: A0A6J1FNC8 (uncharacterized protein LOC111445824 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445824 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-19
Identity = 65/82 (79.27%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
          MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR               + 
Sbjct: 1  MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISRLVPRLGSLESLLPLHSA 60

Query: 61 VSSARLTSCLGIDSVSSRSLSQ 69
          VSSARLTSCLGIDSVSSRSLSQ
Sbjct: 61 VSSARLTSCLGIDSVSSRSLSQ 82

[Close]
BLAST of Carg00384 vs. ExPASy TrEMBL
Match: A0A1S3CQD0 (uncharacterized protein LOC103503603 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503603 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.4e-14
Identity = 56/88 (63.64%), Postives = 63/88 (71.59%), Query Frame = 0 

Query: 1   MASRCRSLATPTISLIKSTLTKPSIKATPASFFTVRSSPTISR--------------QAT 60
           MASR RSLATPTISLIKST+TKPSIK  PA+ FT+ SSPT+SR               + 
Sbjct: 35  MASRFRSLATPTISLIKSTITKPSIKPRPAASFTLCSSPTLSRSIPQLGSLQSLLPLHSA 94

Query: 61  VSSARLTSCLGIDSVSSRSLSQVFTECI 75
           VSSARLTSCLGIDS+SSRSLSQ    C+
Sbjct: 95  VSSARLTSCLGIDSLSSRSLSQELGLCV 122

[Close]
BLAST of Carg00384 vs. TAIR 10
Match: AT5G11630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPA-SFFTVRSSPTISR--------------QA 60
          MASRCRSL+ P  S  +S + KPSI+   A SF  V  SP  SR               +
Sbjct: 1  MASRCRSLSKPAFSAFRSAMNKPSIRPKSASSFIGVPPSPGFSRPIGQLGSLQSLLPLYS 60

Query: 61 TVSSARLTSCLGIDSVSSRSLSQ 69
           V+SARLTSCLGIDS +SRSL+Q
Sbjct: 61 AVASARLTSCLGIDSQNSRSLAQ 83

[Close]
BLAST of Carg00384 vs. TAIR 10
Match: AT5G11630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 1  MASRCRSLATPTISLIKSTLTKPSIKATPA-SFFTVRSSPTISR--------------QA 60
          MASRCRSL+ P  S  +S + KPSI+   A SF  V  SP  SR               +
Sbjct: 1  MASRCRSLSKPAFSAFRSAMNKPSIRPKSASSFIGVPPSPGFSRPIGQLGSLQSLLPLYS 60

Query: 61 TVSSARLTSCLGIDSVSSRSLSQ 69
           V+SARLTSCLGIDS +SRSL+Q
Sbjct: 61 AVASARLTSCLGIDSQNSRSLAQ 83

The following BLAST results are available for this feature:
BLAST of Carg00384 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7031727.14.0e-78100.00hypothetical protein SDJN02_05768, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022940104.11.1e-1975.00uncharacterized protein LOC111445824 isoform X2 [Cucurbita moschata] >XP_0229810... [more]
XP_022940103.13.2e-1979.27uncharacterized protein LOC111445824 isoform X1 [Cucurbita moschata] >XP_0229810... [more]
XP_038897119.16.9e-1463.64protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X2 [Benincasa hispid... [more]
XP_008466067.19.0e-1463.64PREDICTED: uncharacterized protein LOC103503603 isoform X2 [Cucumis melo][more]
BLAST of Carg00384 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6NNL92.9e-0749.40Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3... [more]
BLAST of Carg00384 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IVH25.3e-2075.00uncharacterized protein LOC111480335 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FJ345.3e-2075.00uncharacterized protein LOC111445824 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IYG21.6e-1979.27uncharacterized protein LOC111480335 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FNC81.6e-1979.27uncharacterized protein LOC111445824 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3CQD04.4e-1463.64uncharacterized protein LOC103503603 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Carg00384 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11630.12.1e-0849.40unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G11630.22.1e-0849.40unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 1..72
NoneNo IPR availablePANTHERPTHR33156:SF39OS02G0230000 PROTEINcoord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00384-RACarg00384-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0051641 cellular localization
biological_process GO:0071555 cell wall organization
biological_process GO:0098542 defense response to other organism
biological_process GO:2000280 regulation of root development
biological_process GO:0009617 response to bacterium
cellular_component GO:0110165 cellular anatomical entity