Carg00371 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCAAGGAGCAAATTGGAGCCTAGCCCAGGTGGTGATCCCTTGAGCTTGGACCTTGAGCTGAATCTCAACAGCCAATCTATGAGAAATGGAGGTGAATCAAAGAAGAGGAGCGATGGGGCATGGAAAGAAGGACATGGGTGTCCGCAGCAAGAGATGATAGCGAGGGTTTGCATGCAGTGTCACTTATTGGTAATGGTATTGAAGTCCTCACCGACATGTCCCAACTGCAAATTCATACACCCAATAGACCTGCAAACCCCACCAACTACAACCTTGTTTATAGCCTCTCGCTCTACTAACAATAATCAAACCCAGTCCTTAAAAGGTTTCCCAAACCCTATTCAAAATAAAGTCTAAGTGTGTGGCTATTGATTTAGTGAATTATGAGTAGGACCAGACTTCACTTTATGTTTTGGAATATATGTAA ATGGATCCAAGGAGCAAATTGGAGCCTAGCCCAGGTGGTGATCCCTTGAGCTTGGACCTTGAGCTGAATCTCAACAGCCAATCTATGAGAAATGGAGGTGAATCAAAGAAGAGGAGCGATGGGGCATGGAAAGAAGGACATGGGTGTCCGCAGCAAGAGATGATAGCGAGGGACCAGACTTCACTTTATGTTTTGGAATATATGTAA ATGGATCCAAGGAGCAAATTGGAGCCTAGCCCAGGTGGTGATCCCTTGAGCTTGGACCTTGAGCTGAATCTCAACAGCCAATCTATGAGAAATGGAGGTGAATCAAAGAAGAGGAGCGATGGGGCATGGAAAGAAGGACATGGGTGTCCGCAGCAAGAGATGATAGCGAGGGACCAGACTTCACTTTATGTTTTGGAATATATGTAA MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIARDQTSLYVLEYM Homology
BLAST of Carg00371 vs. NCBI nr
Match: KAG7031714.1 (hypothetical protein SDJN02_05755, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg00371 vs. NCBI nr
Match: KAG6608080.1 (hypothetical protein SDJN03_01422, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 119.8 bits (299), Expect = 9.2e-24 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of Carg00371 vs. NCBI nr
Match: XP_022940283.1 (uncharacterized protein LOC111445951 [Cucurbita moschata]) HSP 1 Score: 117.5 bits (293), Expect = 4.6e-23 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of Carg00371 vs. NCBI nr
Match: XP_023524779.1 (uncharacterized protein LOC111788613 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114.4 bits (285), Expect = 3.9e-22 Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0
BLAST of Carg00371 vs. NCBI nr
Match: XP_022981059.1 (uncharacterized protein LOC111480319 [Cucurbita maxima]) HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20 Identity = 54/64 (84.38%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of Carg00371 vs. ExPASy TrEMBL
Match: A0A6J1FNU7 (uncharacterized protein LOC111445951 OS=Cucurbita moschata OX=3662 GN=LOC111445951 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.2e-23 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 0
BLAST of Carg00371 vs. ExPASy TrEMBL
Match: A0A6J1J0Y6 (uncharacterized protein LOC111480319 OS=Cucurbita maxima OX=3661 GN=LOC111480319 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20 Identity = 54/64 (84.38%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of Carg00371 vs. ExPASy TrEMBL
Match: A0A6J1IME5 (uncharacterized protein LOC111476564 OS=Cucurbita maxima OX=3661 GN=LOC111476564 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.4e-08 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of Carg00371 vs. ExPASy TrEMBL
Match: A0A6J1F8N8 (uncharacterized protein LOC111443136 OS=Cucurbita moschata OX=3662 GN=LOC111443136 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07 Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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