Carg00348 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00348
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	small glutamine-rich tetratricopeptide repeat-containing protein 2
Location	Carg_Chr04: 6724613 .. 6734601 (-)
RNA-Seq Expression	Carg00348
Synteny	Carg00348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTCCTCATCAATTGAGTAGCGGGAGAGTTCTCTACTTATTCAACAAAATTTCCCAACAAACAGAGAAAAAAGTGCACTTTCTTCTCAATGTGAAACTACAGAAGCTTCTCCTGTTGAAGCATATGCGTCAATTCAAAGTCAGGACAATGTGTTGGCAAACAGGAACATTGATGATGAGTCTTCGATGTATGTCAACGACCAGCTCACTAATTCTCCCAAAATTTCTTAAGATATGTCTGTTGATTCCTGAGCGATAGATCAAGTTATGCCTGTCAATTATTTATGAAATGGTTTGGTTAAACAACTAATTAAAGGGCTGCCTTTAGCAGATACATATTCAGTTTTCGGCACGGTTGATTTGTTCTGACTTTGAAGATTCTATTTAGAAGATTAACCCTCGTTTGAATGGTTAATACTTAAGAGATTAGTGCCTGACATCACATCTTTGTGTGTTCTTGACAGTGATTATTTTTCTTACTTCCTATTTAGATTAAACTTATTATACTCTTTTCTTTGTAATTTGTATTTAATTGGCATATGTTGCAGGTCGCAAATATTAGTGGGAACGTCCAACTGCTGAGCTCGGAATCTGAGAGTTCGGATACTACACCAGATGGTTTCCTGGTAGAAAGGGTAAGAACAATTATTATTACTTATGGGATGTAGGATCTAACAATTTAGATGAATTTTGCTTTCTGTTTTGCTCAAAATGATAAGTTTTCACATCTTTTTTAAAAAAAGGTTTAAATTCTTAGCCAAACAGGATGCTATAAAACAGGAAGTTCTGATCTTGAGTTGTTTAACACTGAGATCAGCCATGGCTATCTGATTCTTACGCATTTTCCTTAGAATTTCAATGATTCATTTACAATTGGTCCCTGAATATGTTTCTTTTATTCTCTTTGAAGATTAACAATTGCAAACTTCCTCTTGTTCTTCTTGAAGAAAGAAAGCTGTGTTGAGGAGTGGTGAATGATATGATAACGTGAATATGTTTGTATCTAATAAATCTTCTTGCTCATTTTCAGGTTATTGGAAGTATCAAATGCGAGCATTTGCTGTCTTGAGGTACTGGTTTCCTACCCTAACCATTGTTTACAGGGTTATGAAAATGGTAGTGTTTGGTGATTATAGGAATGAACACTTTGGATTAAGTTAGTAACAATTTTGGATAGTTACTGCATTGTTCAAGTAATGGCTTTCTAATTTCTTCTTTCTTTTTTATTTTATTTTAGTGATATACATACGTACATGTTGAAATATCATCACTAGCCCAATAGAGTCAAAGTCAAGCCCAATTATTGTATGAGCTCAATATATTTATTTTAGTACAGATTTTAGGAGAAAGAGATAAGATATTTTAAGAGAAAGATTCAAATTTGTTAGGTCTAGATTTAGATTGGTTAAATATAGATTGTTTACTCTTAGTATAAATACCTCTCCACCCTACAGTGTGTCTTGTATTCTCCTCTCGATTGGTCTTAATAAGGAGTGCGAGTGTTTCCCACAGTGAGTTGTGTTCAACAATACATGCATGCATGTGCACATGTACATATACACACATATAGACATACATACTTATATTGATTGGTTCTTACAGTTCCAAGTTTTTCGTTAAAACAGTTTCTTTATGTTTTTTTGGTAGTAATTTCTGCTAGTTTAATTTTTCTAGAATTAAATTAATATGTTTCTGTAAAAACAAATTTTAAATACATTACATTTATTTATTAGATGTTATTTTAATTCATTAACCATTTTTCTAGTTGGGTTTTAGTTTAACTATTAGACTTTAAAAATGTTCGTGTTAAAAAAAAAAAAAAAAAATCATATGCATTCAATAACTTATATAACATAATAGTTGAATTTTAGACTGGAAAAAAAAAAACAAAATAATAGTTGACAACCTAAATTTATTTTATTCCTAAATTTTACCTAATTTTATTTTTAAATAAATATTTGATGTTAATAGTATTGATATTACTTGAGTGAAATAAGCTGAATATTATTTTATTATCATTCTATATTTAGAAATATGCAATTTTATGCCCAATAATTAATGTAACGAAATTTACTTATAACATATACATAATATATATATATATATATTATTGATTAAGAGTTGAAATCATTTATTTAAAATGATGTGAAAAAAAACCTAATAAAAGTATTTAAAGTATAAAAAAAATATAACTTTTTTCTCTCTATTACCGCATTTTTTATATATTACCACGAAAGAATATATACGTATTACATACGTAATAATATAAATGAAAATTGGAATGAATAGTCAAAATATGCCTTCAAAATAATTTATGCTTATTACCATTTTGAAAGCGACTCAAATAGTTAAAATAATTAAAACTTTTATTGTATTCAAAATCAAATTTTATGAAATTACCATTTTTAATCAATAATATATCTATATATATATTCCACGTAATTTTCTTGATAAAAAATTATATATTCCACGTAATTTTCTTGATAAAAAATTATATATTCCACGTAACCTTCACGAAAGGTACATTTCGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGGTGTATTTCGGTTCTATTGCCGCGTGGAATTGGAAATTACCGCCGCAGCTTTTTTAATCTCCAGGACCAGCAGAAGGTTGCCACTTCTGAGCTTCTCAACTCCCTCAAGACTTCTGCAACTCCGACCATTCCAAGTCCCATCGCCGCCTTTTGCCTCACAGCTCCATTCTAGGTTTTCAGGCGGAGCCGAGCTCTCGTTACCTGTGTTCAGACGGTTCGCGCCTTCTTATCATGTGCGCTTGCCCATGGCTAACTTGAGGACCGACTCTCCCGTCGCTTGTCGCATCGTTCTTGCCTTTCTCGACTTCCTTAACTCTGGTCTCTGCTTTTCTCCCTTTTCACGATCATTTATGTTCCTGTAATGTTGTAGTTGAGCAGTTTTCGACGCTCTTCAGTAGGTTTTTCTTCTGCTAATGATTTAGCGCGATTGCGGAGTAGGTTTTTTATGATAGATTTTCGATGCTGAATTACTGGAATGTATTGTGTCGTGTCGAATTTGTGTACATTAGGCAATTTTAGTGGAGTGAAGCGATGTGTTGTATTAAGTGATGTTCGTTACTACTTTGATGTTTGTTTTAGGGTTTCCATTAAGCAATTCTAACTCGTTATCTTATGATATTTGTTTTGTGCGCAGTGGAGCCAGGCCCAGGTGTTGATGTTGAGGGCATTGAGGTAGCAAAACAATGTTTAGAACAAGTGTTTAAAGTTCAGTCTCCTGCTGCCGGCGAGTTAGCGGAATTCAATTCGCTAGTAGGCATTTTTAGTTCACCGGAATCTTTTCAGCGTTCTGGAACTAATTCATCTGTTGATAATGGAGCCGTTCCGATGGAACATTGCAGTTCTCTCAATGTGAATGATTCTGGCGCCAATTTGTCAAAGTCATCAAGACCTCAGGTCAGCTTTCCTTGCGGTTTTCTGTTCATGAAAATTTCAGCAATATTAAGTCATTAATTCTCTGTGCTAATTTCCATGTCTTCATATACGCTTTGAATTCCATGCCATTTGTGTGTATAAAAATAATTTGTGAAGTTTATCATCGTTAGGTCAGCATTGAAATACGTCGCATTGGTATTTCAATCTGTAAACATGGTCAAATGTGTAGCCAGAATGAGATTATCTGCAGTGCGTTTTTCATTTCAACATTTTGAGCCAAAAGTAGAAGTGAAACTTACATCCCCGGAATTTCAAAATAGTGTTCATTAAGGCCTGATTGTTTTTCAATCAAAATGTATCCGGTTGGTAGTTGCATGCCCCGATTGTAAGGTCTGAATTTGATCCCATCTCCTCTTGATTGATCTTGTGTAGTAATTTTCATTTTCTTTTTTCTTTTTCTTGGAAAAGGTTCTTTGTTTAGTCTACTTTTAGAAAGTAAGAAATGATGTTGCTAAGTAATGTTGTTCGGCACTTCAAAGCATCCAAATTATATAATTTTATGTACACTCATAAATGTTTTTATTAGTGTTCGTGTTTGTTTGAAAATGTTTTGAATTCAATCAATTATAACTTATCTGATTGTCTTATTTGATTGTTGAGTTTTGATTTTCTCTCTCTCAATTAATCCAGGGGGATGATTGTTCAAGAGAATCTCATCCCTTAGGTAGGTTTTCTCCTCTTTTTTTTTTTTTTTTTTCTGTTCCTTGTATACCTTTGTCTTTGATATATATATACACATATTATATGTAATTTTAGCTGTATTCATAGAAAATAGAAACTACACATCAGCATCCCACTCTTATTACCTCTTGTTCTTCAAGATTCCCTCTTAGGTTTCAAGGGTTGTAGATAAGTTGTGAACCTTAGTTGAAGTACCTTAAAGCAGTAGAAGGATCATGCTTGGTGAATTCGGAATTTTGAAGCATTGTCTCTCAGTCTAGATATATATGCATCAGTTGTGTTTGGTATGTGGAAAAAAAGAAAAAAGGAATTTGACTTAGATCTAGAACTGACTTTGCAATTAGACATGGAAAGTAGGTCTTTTTCATGGTCTAATTACTAAATGTTTATGCTCAATATGAAAATGGGAGCCTGCAAAATGTAGTAATTGTAGCTGTTGGAGATTTCGTCTGAAAATTTTGTTTCACCTCTCTATTTTGCTAATTGTAACGCAGGGAACAATAGTGGTAGAAAAGATGGTGACAAAATTGCACTTAGAAGTACAAGTTTTCACTTGTTTGGTCACCATCCATAAGACTAACTGCAATGACCACTGGACCAGATTCAAACTAAATCAAAACTGCAAGTTTACATGAAAAGCAAAAAAGGGAAAAAAAAGAAAAAGAAAAAGAAAAAGAAACTATGCTCAAGTTGCTAACTTGTGACTAATTGGTGGCGATTGCAATGATATATGACAATTTTACTTGGAATTGATGAAGGAAAGAAACATAAGCGCTTTTTAAAAAGAAAGAAAGAAAAAAAAAAAAAAAAAACAAGAAACAAAAACTTCTTCAAAGATAATTTTTAATTTGGAGTGGCTAAAATCTTTTGTCGTCTTCGGATTTCCATCATAATTTCCCATTCCATATATTTACATTTTTTTTTTGTTTATCCTATATTTTATTACCTCCTTATTTGATATAAAGGTTTGCTTTCTTTGAGCTTTGGAGGAGGTAAGGCATCATTTGATAATAATCTTGTTTTAAGTTTTTTGTTTTAAAAAATTAGATTTATTTCCTCTCAATTGTTTTAGTTTTTTGTCTTTTACCATTTTACAAATATATTTGAATTATAAACCAAATTTAAAAAATGATAACTGGTTTTTAAAGGCTACTTATCTTTTTGTCTTTAAATTTTGACTTCTTTTTTGTGATCCCTCATGCCCGAGATTCATATCAGGATTTGGAATCCGGATTTGGCACCAGATGGCCTCGACATTTTCTTACATCCCTTATGACCATGTCACGTACTTGTCTTGAATTACTTTTAAAAGTGGAGACTATCCCCACAAACTAACAGAGATTTTTTTAGCATCCTTTATCTTCACTCACATGTTTTTTAGGAAAATTTCTAAGATGTAACCCAACATAGAATAGTTCCAAACTAAGCGCACTTGAATTTGAAGTTTCTATGGTTAAGCAATTGAAAAGGAAGGTGCACTTTGTTGGTATAGGTAGTGACTTTCAATTCTTTTAAGCCTTTTTTAACCATCATATTCTTAGGATCACTTTCATTCGAATGTAATCTTGGTTCATTAATGTACTCCTTTACTTGTGTGTCACATGCCCACTAGCTTCCATATTAGTTCGTTTTTGAACTATATCCTATTGGAAGTGGCCTCACTCTGATACTATATGTAACACCTCATGTCTAAGATTTAGATCAGAGTTTGGAATCCATATTTTACACTTGATGGTCCTAGTATTTCTATGTAGCCCCCATAAGATGATTCTAAGAGGGAAGACTGTTGCCCCCACATATAATTGCTCCAAGCTAAGCATGCTTAGTTTTGGAGTTTCTATGAGTCACGAGAAAAAGATGTGCGTTGTTGGTATAGGTAGTGATTTTCAATTCTTTTAATTATTTCTTATCTATCGTATCCTTAGAATCACTCTCATTCTGATGTGGTCTCGATTTATTCATGTACCCTTCATTTACTCAGACGTCACACTTTTATAAAGTAGATAACAACTCAAAGAAATGCATGAATGGAAATAGCATTTATAATTTAAATTTTCAAAAGCATAAAATAAAAAACAAAATAGCTGTGGAAGGAGGCCTAAATAATTGTGATTTTGTTGCAGGAAGAGGAAGATGTTTTGTTTCCTCTTATCATAATGATGATTTTCTTTGTAATAGGGCCCATGAATTGTTCGTGATTAACCTTTGTTTTTCTCTCACTTAATTTTACTATGAGATTCATGGGTCAAGTCAATTTAATTTTTATTCAAAATTCCAAAGGAAGCATTATCCTTTGTTTCATGGAGACAGTATTGCAAGAGTTGCTAGTAGGAGGAAGAATTATTTTTAAATGTTCGCTTTCAGAACTTTGTTGGATTAATTGGGTTGAAAGAATCGAGTCTCCTTGAAGAAAAGGAGGGATGGCTTGACACCTTGTATTCTAGAGGATTGGTCTTTCTAAAGTTTTTTTCCCTCGATTGTCAGTCCTTTCTTTTTCTTCTTTGAAAGAGGGATTCCTCTTCCTTTTCTAATAGGAATTTTGAAAAGGGATTTTTGATTCTCTTCTTTTTGTATGTTCATCTTTTTTGATATTATAAAAATATTTTTCTGTAAAAGAATTGTATAGGATTGTATATGTTGAATCAATTAAATTGGTGGTTTGGATTCTTTTTTCTTTTCATTTTTTCTGCGTTGGTCAACATTTTTGCAGGAGTATTGCAAGATGAACTTTTTGGGCAATTTGTTCTTGCACTTGAAAAACTTCGATATTTTAGGACCTCAGCAGATGGGAGGGATGATCCTGACCAACTCGAGCGAGCAACTCGTTTGTTTCATGATGCTCTTGGAGTATGATTTTTTTTGTTCTTTTGTTGCTTCAGATGAATTTGTATCTCTGTGTTCCTTATCTCAGCATCTGTTGCTAGATATTCTTAATGCAGTTAGTAACTTATCTGCTACTGGTTCATTGCCTCATAGAACGTTCTCTTACTTTTGAAGAGTACCCTTCCCTTTCTCTTCCCTTGCTTCCTTGGATAATCCTTAACCAAATTTCTCACTGCTTCAGGAAATGGAAAGATCTGGATGCACCGAAATTAATCACAAAAACCTGGCTGAGTCCTTGAAGTCCCTTGGTATCACAACTCCTAAGAAATAATTTTTAGCCTGTTCTATTTTATCGTATGATTTCCTGTCCTAACGCACATTCATTTAATATGGTAAAGGTAATAATTGGTTAAATGTATCGTTTAGATACTTTGCTTTTTATTATTTAGACGTACTCTTCATGCTTACATTTATCCTTTATTTGATAAAATAAGACATTATTTTTGCAGTCTAATTGATCTTCCAATCTCTCTTTTTATAGGCCCAGCTCACTGAAAGGTTCTAATATGGAAAAATATGTTCTGTTTTAGGTAACAGGGCTATGCAGTCAAAACTATACTCCGACGCAATTGAGTTGTATAGCTGTGCAATTGCACTATGTGAAAATAATGCCATTTACTACTGTAACAGGTAGAATTCTGTTATATCATAAAGAGCATTAATACGAATTGCAATAGAGTATCTAATCGTGCTAGTTAAGGAATTTCTTTTCCTTCTATATGTATGAGATAAGAACTAATTCACTCATACATTCACTTTTCTGAGTTATGCAGATTAGTTTGCCACCCTTGTAAACTGAATGTTTTGAAAAAAAATAAATGCTATCATTAGTTATATGAGAAACTTAACATTTGTCAAATTTTCGTAAAAATGATTTATGGATGATTAAGATCCTGGACATACTTAGGCTTCTCTTACCGCTCTTTCAATATTCCATATTATCCAAATATTTTGACATTAAATATTGTCGAATCACAAATGCACAGACAAAAAATTTGTATGAACGTAAAAATGTATCTGCTCACAACCATTATCTTTATAACTACTTTGTCCTGGTTTACTTGGCTCTTTTGTCAATTTTAATTTCATTGAAATGTATGGAAGACAGATTCATTGTTGTTATTTTCCTCACCCAATTTTGTATTGATGGATTTTTTTTCAATGTCAAAAAAATTAAAACTCCTTAGGGCAGCTGCTTACACTCAAATCCAAAAATACTCTGAAGCAACAAGAGATTCTTTGAAATCCATTGAAATTGACCCAAATTATAGCAAGGCATATAGTCGTCTGGGCTTGGCTTTATATGACCAGGGGAGCTATCGTGATGCTATTGATAAAGGATTTATGAAAGGTTGGTGAGACATCGAACATTAAAACCCATGCAGTGCATTAGGCTAATTAAACTTATGTTCAATTGTGAAAGTATTTGTAGAGAACTATATGTATTTGGAACTGATTAGGTCTTCTTTTTTGCACATACTATGTTTTTTATTACCCATATCGAATGCATTTTAAAATGCCAGCTTTAATGTGCAGCCTTGCAGTTGGATCCAAACAATGAAGCTGTCAGGGAAAATATTCGAGTTAATACACTGTGACTTCTATTCTTTCATATTTCTCAATACTGAAAGCTCGATTTCGTTAACTTAAACAATGCATTGACTTTCACCACCAGAACTGATTTTTCTATTACTGTAACACTATTATTGTTTGAAAATGTTTTATTTCAACTCGTAGGTAGCTGAACAGAAGTTAAAGGAAGCACAGCGACAAACTCACCATGAGCAGGTACAATGTGCTTTATTTTCTCATGAAACAAACGATCCCTTCACCAAGGATTGTTGGTTCTCAAACTTGTAATAGAAGTTAGTAAGTTCAAGGAAGCCATTGATTGCTCCTCCTATGAGTTGTGGTACAAATATTTGGATTTTGAAGTGCGAAATAGGCCACTTCCTTCGGATGGTATAATTTAAGCATTCTAACCACCTAATATAATTGACGGCCCTAGAATGAAAATGATCTCGATCTCTTCCAAATTCAAGATAAAAAAAAAATGTTGCCATGTTTTTGTCTATGTCAACTCCTATTCATTGTGTTGCTCTCTCAGAATCCTACTACTTTACTAGTTCTCACTTAATAATCAACATTATCTAGTGGTCATGGGTCAGAATTCTTGAAGTCCAGAGTAAATTGTTTTTCCGTAATGATCAAGTATGTAATATCTTTCTGTGGCCATATAAGAGTGCTGGAAAATTTACTTCATTAATGTGATGTGAATGAAATGGCTTCAGGAACCAAAAGTGCTATTGTTCAGCCACTTGAAGTTAGTAGAAATGTTGCAAATGCGATCCAATTTGAATATGTAATGAGCAGTAGCCTGCTAATTTTTGCTTGCTCATCCTTCTGCTAACTCCACTACAATTTATCTTCCATGGATTTAATTCTATGCAGGGTTCATCCAGTCGAAGTCAAGAATCCCAATACCAGCAGTCTAGTGGAGCGTCAAGGAATGACAGCCCATCACCTCCCTTCCCTTCTATGCCCTTTAATGGCACTTTACCTTCCGAAATCTCAAACATATTCATGAACATGGCTGCTAACCATGGGCAACATACCGGAGTCGGGGGAGAAGAAAACAGAAGCGGAAATGGATCAGCAGATGATCCAAGAACAAATATGGATGCAAATTTCAGTTTCAGCGTTGGAGATGGAATGCCACAGGATCTCAATGGTGCTTTGAGATCTATGATGCAGATGTTCACCGGAGCAGCCTCCGGTACAAATCCTCAGGATAACATCAATAGAAGACCCCCACAAGGCTGAAACCTTCAGGTCGGTATATTGTTGCGCAAAGTCCCCTCTATTTGACTTTTTTCTTTTTTATTCAAGTTGACTTCGATTTCCTTTATATCTT

mRNA sequence

AATGTCCTCATCAATTGAGTAGCGGGAGAGTTCTCTACTTATTCAACAAAATTTCCCAACAAACAGAGAAAAAAGTGCACTTTCTTCTCAATGTGAAACTACAGAAGCTTCTCCTGTTGAAGCATATGCGTCAATTCAAAGTCAGGACAATGTGTTGGCAAACAGGAACATTGATGATGAGTCTTCGATGTCGCAAATATTAGTGGGAACGTCCAACTGCTGAGCTCGGAATCTGAGAGTTCGGATACTACACCAGATGGTTTCCTGGTAGAAAGGGTTATTGGAAGTATCAAATGCGAGCATTTGCTGTCTTGAGGACCAGCAGAAGGTTGCCACTTCTGAGCTTCTCAACTCCCTCAAGACTTCTGCAACTCCGACCATTCCAAGTCCCATCGCCGCCTTTTGCCTCACAGCTCCATTCTAGGTTTTCAGGCGGAGCCGAGCTCTCGTTACCTGTGTTCAGACGGTTCGCGCCTTCTTATCATGTGCGCTTGCCCATGGCTAACTTGAGGACCGACTCTCCCGTCGCTTGTCGCATCGTTCTTGCCTTTCTCGACTTCCTTAACTCTGTGGAGCCAGGCCCAGGTGTTGATGTTGAGGGCATTGAGGTAGCAAAACAATGTTTAGAACAAGTGTTTAAAGTTCAGTCTCCTGCTGCCGGCGAGTTAGCGGAATTCAATTCGCTAGTAGGCATTTTTAGTTCACCGGAATCTTTTCAGCGTTCTGGAACTAATTCATCTGTTGATAATGGAGCCGTTCCGATGGAACATTGCAGTTCTCTCAATGTGAATGATTCTGGCGCCAATTTGTCAAAGTCATCAAGACCTCAGGGGGATGATTGTTCAAGAGAATCTCATCCCTTAGGAGTATTGCAAGATGAACTTTTTGGGCAATTTGTTCTTGCACTTGAAAAACTTCGATATTTTAGGACCTCAGCAGATGGGAGGGATGATCCTGACCAACTCGAGCGAGCAACTCGTTTGTTTCATGATGCTCTTGGAGAAATGGAAAGATCTGGATGCACCGAAATTAATCACAAAAACCTGGCTGAGTCCTTGAAGTCCCTTGGTAACAGGGCTATGCAGTCAAAACTATACTCCGACGCAATTGAGTTGTATAGCTGTGCAATTGCACTATGTGAAAATAATGCCATTTACTACTGTAACAGGGCAGCTGCTTACACTCAAATCCAAAAATACTCTGAAGCAACAAGAGATTCTTTGAAATCCATTGAAATTGACCCAAATTATAGCAAGGCATATAGTCGTCTGGGCTTGGCTTTATATGACCAGGGGAGCTATCGTGATGCTATTGATAAAGGATTTATGAAAGCCTTGCAGTTGGATCCAAACAATGAAGCTGTCAGGGAAAATATTCGAGTAGCTGAACAGAAGTTAAAGGAAGCACAGCGACAAACTCACCATGAGCAGGGTTCATCCAGTCGAAGTCAAGAATCCCAATACCAGCAGTCTAGTGGAGCGTCAAGGAATGACAGCCCATCACCTCCCTTCCCTTCTATGCCCTTTAATGGCACTTTACCTTCCGAAATCTCAAACATATTCATGAACATGGCTGCTAACCATGGGCAACATACCGGAGTCGGGGGAGAAGAAAACAGAAGCGGAAATGGATCAGCAGATGATCCAAGAACAAATATGGATGCAAATTTCAGTTTCAGCGTTGGAGATGGAATGCCACAGGATCTCAATGGTGCTTTGAGATCTATGATGCAGATGTTCACCGGAGCAGCCTCCGGTACAAATCCTCAGGATAACATCAATAGAAGACCCCCACAAGGCTGAAACCTTCAGGTCGGTATATTGTTGCGCAAAGTCCCCTCTATTTGACTTTTTTCTTTTTTATTCAAGTTGACTTCGATTTCCTTTATATCTT

Coding sequence (CDS)

ATGCGAGCATTTGCTGTCTTGAGGACCAGCAGAAGGTTGCCACTTCTGAGCTTCTCAACTCCCTCAAGACTTCTGCAACTCCGACCATTCCAAGTCCCATCGCCGCCTTTTGCCTCACAGCTCCATTCTAGGTTTTCAGGCGGAGCCGAGCTCTCGTTACCTGTGTTCAGACGGTTCGCGCCTTCTTATCATGTGCGCTTGCCCATGGCTAACTTGAGGACCGACTCTCCCGTCGCTTGTCGCATCGTTCTTGCCTTTCTCGACTTCCTTAACTCTGTGGAGCCAGGCCCAGGTGTTGATGTTGAGGGCATTGAGGTAGCAAAACAATGTTTAGAACAAGTGTTTAAAGTTCAGTCTCCTGCTGCCGGCGAGTTAGCGGAATTCAATTCGCTAGTAGGCATTTTTAGTTCACCGGAATCTTTTCAGCGTTCTGGAACTAATTCATCTGTTGATAATGGAGCCGTTCCGATGGAACATTGCAGTTCTCTCAATGTGAATGATTCTGGCGCCAATTTGTCAAAGTCATCAAGACCTCAGGGGGATGATTGTTCAAGAGAATCTCATCCCTTAGGAGTATTGCAAGATGAACTTTTTGGGCAATTTGTTCTTGCACTTGAAAAACTTCGATATTTTAGGACCTCAGCAGATGGGAGGGATGATCCTGACCAACTCGAGCGAGCAACTCGTTTGTTTCATGATGCTCTTGGAGAAATGGAAAGATCTGGATGCACCGAAATTAATCACAAAAACCTGGCTGAGTCCTTGAAGTCCCTTGGTAACAGGGCTATGCAGTCAAAACTATACTCCGACGCAATTGAGTTGTATAGCTGTGCAATTGCACTATGTGAAAATAATGCCATTTACTACTGTAACAGGGCAGCTGCTTACACTCAAATCCAAAAATACTCTGAAGCAACAAGAGATTCTTTGAAATCCATTGAAATTGACCCAAATTATAGCAAGGCATATAGTCGTCTGGGCTTGGCTTTATATGACCAGGGGAGCTATCGTGATGCTATTGATAAAGGATTTATGAAAGCCTTGCAGTTGGATCCAAACAATGAAGCTGTCAGGGAAAATATTCGAGTAGCTGAACAGAAGTTAAAGGAAGCACAGCGACAAACTCACCATGAGCAGGGTTCATCCAGTCGAAGTCAAGAATCCCAATACCAGCAGTCTAGTGGAGCGTCAAGGAATGACAGCCCATCACCTCCCTTCCCTTCTATGCCCTTTAATGGCACTTTACCTTCCGAAATCTCAAACATATTCATGAACATGGCTGCTAACCATGGGCAACATACCGGAGTCGGGGGAGAAGAAAACAGAAGCGGAAATGGATCAGCAGATGATCCAAGAACAAATATGGATGCAAATTTCAGTTTCAGCGTTGGAGATGGAATGCCACAGGATCTCAATGGTGCTTTGAGATCTATGATGCAGATGTTCACCGGAGCAGCCTCCGGTACAAATCCTCAGGATAACATCAATAGAAGACCCCCACAAGGCTGA

Protein sequence

MRAFAVLRTSRRLPLLSFSTPSRLLQLRPFQVPSPPFASQLHSRFSGGAELSLPVFRRFAPSYHVRLPMANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEFNSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASGTNPQDNINRRPPQG

Homology

[Close]

BLAST of Carg00348 vs. NCBI nr
Match: KAG7031691.1 (Small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 977.6 bits (2526), Expect = 4.0e-281
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MRAFAVLRTSRRLPLLSFSTPSRLLQLRPFQVPSPPFASQLHSRFSGGAELSLPVFRRFA 60
           MRAFAVLRTSRRLPLLSFSTPSRLLQLRPFQVPSPPFASQLHSRFSGGAELSLPVFRRFA
Sbjct: 1   MRAFAVLRTSRRLPLLSFSTPSRLLQLRPFQVPSPPFASQLHSRFSGGAELSLPVFRRFA 60

Query: 61  PSYHVRLPMANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSP 120
           PSYHVRLPMANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSP
Sbjct: 61  PSYHVRLPMANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSP 120

Query: 121 AAGELAEFNSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQG 180
           AAGELAEFNSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQG
Sbjct: 121 AAGELAEFNSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQG 180

Query: 181 DDCSRESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMER 240
           DDCSRESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMER
Sbjct: 181 DDCSRESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMER 240

Query: 241 SGCTEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQ 300
           SGCTEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQ
Sbjct: 241 SGCTEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQ 300

Query: 301 KYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVREN 360
           KYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVREN
Sbjct: 301 KYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVREN 360

Query: 361 IRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEIS 420
           IRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEIS
Sbjct: 361 IRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEIS 420

Query: 421 NIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQ 480
           NIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQ
Sbjct: 421 NIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQ 480

Query: 481 MFTGAASGTNPQDNINRRPPQG 503
           MFTGAASGTNPQDNINRRPPQG
Sbjct: 481 MFTGAASGTNPQDNINRRPPQG 502

[Close]

BLAST of Carg00348 vs. NCBI nr
Match: KAG6608061.1 (Small glutamine-rich tetratricopeptide repeat-containing protein beta, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 974.5 bits (2518), Expect = 3.4e-280
Identity = 501/502 (99.80%), Postives = 501/502 (99.80%), Query Frame = 0


Query: 1   MRAFAVLRTSRRLPLLSFSTPSRLLQLRPFQVPSPPFASQLHSRFSGGAELSLPVFRRFA 60
           MRAFAVLRTSRRLPLLSFSTPSRLLQLRPFQVPSPPFASQLHSRFSGGAELSLPVFRRFA
Sbjct: 1   MRAFAVLRTSRRLPLLSFSTPSRLLQLRPFQVPSPPFASQLHSRFSGGAELSLPVFRRFA 60

Query: 61  PSYHVRLPMANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSP 120
            SYHVRLPMANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSP
Sbjct: 61  TSYHVRLPMANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSP 120

Query: 121 AAGELAEFNSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQG 180
           AAGELAEFNSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQG
Sbjct: 121 AAGELAEFNSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQG 180

Query: 181 DDCSRESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMER 240
           DDCSRESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMER
Sbjct: 181 DDCSRESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMER 240

Query: 241 SGCTEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQ 300
           SGCTEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQ
Sbjct: 241 SGCTEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQ 300

Query: 301 KYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVREN 360
           KYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVREN
Sbjct: 301 KYSEATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVREN 360

Query: 361 IRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEIS 420
           IRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEIS
Sbjct: 361 IRVAEQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEIS 420

Query: 421 NIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQ 480
           NIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQ
Sbjct: 421 NIFMNMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQ 480

Query: 481 MFTGAASGTNPQDNINRRPPQG 503
           MFTGAASGTNPQDNINRRPPQG
Sbjct: 481 MFTGAASGTNPQDNINRRPPQG 502

[Close]

BLAST of Carg00348 vs. NCBI nr
Match: XP_022941048.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 839.7 bits (2168), Expect = 1.3e-239
Identity = 431/434 (99.31%), Postives = 431/434 (99.31%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MANLRTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF
Sbjct: 1   MANLRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           NSLVGIFSS ESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH
Sbjct: 61  NSLVGIFSSTESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH
Sbjct: 121 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 180

Query: 249 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 308
           KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD
Sbjct: 181 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 240

Query: 309 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 368
           SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL
Sbjct: 241 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 300

Query: 369 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 428
           KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA
Sbjct: 301 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 360

Query: 429 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG 488
           NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG
Sbjct: 361 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG 420

Query: 489 TNPQDNINRRPPQG 503
            NPQDNINRRPPQG
Sbjct: 421 ANPQDNINRRPPQG 434

[Close]

BLAST of Carg00348 vs. NCBI nr
Match: XP_023525254.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 [Cucurbita pepo subsp. pepo] >XP_023525255.1 small glutamine-rich tetratricopeptide repeat-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 833.9 bits (2153), Expect = 7.1e-238
Identity = 427/434 (98.39%), Postives = 429/434 (98.85%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MANLRTDSPVACRIV AFLDFLNSVEPGPGVDVEGIE+AKQCLEQVFKVQSPAA ELAEF
Sbjct: 1   MANLRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEIAKQCLEQVFKVQSPAADELAEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           NSLV IFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH
Sbjct: 61  NSLVDIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH
Sbjct: 121 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 180

Query: 249 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 308
           KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD
Sbjct: 181 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 240

Query: 309 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 368
           SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL
Sbjct: 241 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 300

Query: 369 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 428
           KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISN+FMNMAA
Sbjct: 301 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNMFMNMAA 360

Query: 429 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG 488
           NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAA G
Sbjct: 361 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPG 420

Query: 489 TNPQDNINRRPPQG 503
            NPQDNINRRPPQG
Sbjct: 421 ANPQDNINRRPPQG 434

[Close]

BLAST of Carg00348 vs. NCBI nr
Match: XP_022980999.1 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 825.9 bits (2132), Expect = 1.9e-235
Identity = 424/434 (97.70%), Postives = 426/434 (98.16%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MAN+RTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAA ELAEF
Sbjct: 1   MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           NSLV IFSSP SFQRSGTNSSVDNG VPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH
Sbjct: 61  NSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGC EINH
Sbjct: 121 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCAEINH 180

Query: 249 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 308
           KNLAESLKSLGNRAMQSKL+SDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD
Sbjct: 181 KNLAESLKSLGNRAMQSKLFSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 240

Query: 309 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 368
           SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL
Sbjct: 241 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 300

Query: 369 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 428
           KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA
Sbjct: 301 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 360

Query: 429 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG 488
           NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAA G
Sbjct: 361 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPG 420

Query: 489 TNPQDNINRRPPQG 503
            NPQDNINRRPPQG
Sbjct: 421 GNPQDNINRRPPQG 434

[Close]

BLAST of Carg00348 vs. ExPASy Swiss-Prot
Match: Q8VD33 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus OX=10090 GN=Sgtb PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.2e-23
Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 252 AESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLK 311
           A+ LK  GN  M+ + Y+ A++ Y+ AI L  NNA+YYCNRAAA +++  Y++A +D  K
Sbjct: 85  ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEK 144

Query: 312 SIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEA 371
           +I ID  YSKAY R+GLAL     + +A+   + KAL LDP N++ + N+++AEQKL+E 
Sbjct: 145 AIAIDSKYSKAYGRMGLALTAMNKFEEAV-TSYQKALDLDPENDSYKSNLKIAEQKLREV 204

Query: 372 QRQT 376
              T
Sbjct: 205 SSPT 207

[Close]

BLAST of Carg00348 vs. ExPASy Swiss-Prot
Match: Q80W98 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus OX=10116 GN=Sgtb PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.2e-23
Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 252 AESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLK 311
           A+ LK  GN  M+ + Y+ A++ Y+ AI L  NNA+YYCNRAAA +++  Y++A +D  K
Sbjct: 85  ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEK 144

Query: 312 SIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEA 371
           +I ID  YSKAY R+GLAL     + +A+   + KAL LDP N++ + N+++AEQKL+E 
Sbjct: 145 AIAIDSKYSKAYGRMGLALTAMNKFEEAV-TSYQKALDLDPENDSYKSNLKIAEQKLREV 204

Query: 372 QRQT 376
              T
Sbjct: 205 SSPT 207

[Close]

BLAST of Carg00348 vs. ExPASy Swiss-Prot
Match: Q96EQ0 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens OX=9606 GN=SGTB PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.2e-22
Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 252 AESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLK 311
           A+ LK  GN  M+ + Y+ A++ Y+ AI L  NNA+YYCNRAAA +++  Y++A +D  K
Sbjct: 85  ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEK 144

Query: 312 SIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEA 371
           +I ID  YSKAY R+GLAL     + +A+   + KAL LDP N++ + N+++AEQKL+E 
Sbjct: 145 AIAIDSKYSKAYGRMGLALTALNKFEEAV-TSYQKALDLDPENDSYKSNLKIAEQKLREV 204

Query: 372 QRQT 376
              T
Sbjct: 205 SSPT 207

[Close]

BLAST of Carg00348 vs. ExPASy Swiss-Prot
Match: Q8BJU0 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 3.9e-21
Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 252 AESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLK 311
           AE LK+ GN  M+ + +  A+ LY  AI L   NA+Y+CNRAAAY+++  Y  A +D  +
Sbjct: 92  AERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCER 151

Query: 312 SIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEA 371
           +I IDP YSKAY R+GLAL     + +A+   + KAL+LDP+N+  + N+++AE KL+EA
Sbjct: 152 AIGIDPGYSKAYGRMGLALSSLNKHAEAV-AYYKKALELDPDNDTYKSNLKIAELKLREA 211

Query: 372 QRQT 376
              T
Sbjct: 212 PSPT 214

[Close]

BLAST of Carg00348 vs. ExPASy Swiss-Prot
Match: O70593 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus OX=10116 GN=Sgta PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.9e-21
Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 252 AESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLK 311
           AE LK+ GN  M+ + +  A+ LY  AI L   NA+Y+CNRAAAY+++  Y  A +D  +
Sbjct: 91  AERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCER 150

Query: 312 SIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEA 371
           +I IDP YSKAY R+GLAL     + +A+   + KAL+LDP+N+  + N+++AE KL+EA
Sbjct: 151 AIGIDPGYSKAYGRMGLALSSLNKHAEAV-AYYKKALELDPDNDTYKSNLKIAELKLREA 210

Query: 372 QRQT 376
              T
Sbjct: 211 PSPT 213

[Close]

BLAST of Carg00348 vs. ExPASy TrEMBL
Match: A0A6J1FR00 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446452 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 6.3e-240
Identity = 431/434 (99.31%), Postives = 431/434 (99.31%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MANLRTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF
Sbjct: 1   MANLRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           NSLVGIFSS ESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH
Sbjct: 61  NSLVGIFSSTESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH
Sbjct: 121 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 180

Query: 249 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 308
           KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD
Sbjct: 181 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 240

Query: 309 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 368
           SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL
Sbjct: 241 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 300

Query: 369 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 428
           KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA
Sbjct: 301 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 360

Query: 429 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG 488
           NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG
Sbjct: 361 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG 420

Query: 489 TNPQDNINRRPPQG 503
            NPQDNINRRPPQG
Sbjct: 421 ANPQDNINRRPPQG 434

[Close]

BLAST of Carg00348 vs. ExPASy TrEMBL
Match: A0A6J1J0T2 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480278 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 9.3e-236
Identity = 424/434 (97.70%), Postives = 426/434 (98.16%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MAN+RTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAA ELAEF
Sbjct: 1   MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           NSLV IFSSP SFQRSGTNSSVDNG VPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH
Sbjct: 61  NSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGC EINH
Sbjct: 121 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCAEINH 180

Query: 249 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 308
           KNLAESLKSLGNRAMQSKL+SDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD
Sbjct: 181 KNLAESLKSLGNRAMQSKLFSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 240

Query: 309 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 368
           SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL
Sbjct: 241 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 300

Query: 369 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 428
           KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA
Sbjct: 301 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 360

Query: 429 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAASG 488
           NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAA G
Sbjct: 361 NHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGAAPG 420

Query: 489 TNPQDNINRRPPQG 503
            NPQDNINRRPPQG
Sbjct: 421 GNPQDNINRRPPQG 434

[Close]

BLAST of Carg00348 vs. ExPASy TrEMBL
Match: A0A6J1FK29 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446452 PE=4 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 2.0e-217
Identity = 402/437 (91.99%), Postives = 410/437 (93.82%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MANLRTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF
Sbjct: 1   MANLRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           NSLVGIFSS ESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH
Sbjct: 61  NSLVGIFSSTESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH
Sbjct: 121 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 180

Query: 249 KNLAESLKSLG---NRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEA 308
           KNLAESLKSLG        ++L   A++L+   + +     +    RAAAYTQIQKYSEA
Sbjct: 181 KNLAESLKSLGLCSQNYTPTQLSCIAVQLH--YVKIMPFTTVTELLRAAAYTQIQKYSEA 240

Query: 309 TRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAE 368
           TRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAE
Sbjct: 241 TRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAE 300

Query: 369 QKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMN 428
           QKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMN
Sbjct: 301 QKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMN 360

Query: 429 MAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGA 488
           MAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGA
Sbjct: 361 MAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTGA 420

Query: 489 ASGTNPQDNINRRPPQG 503
           ASG NPQDNINRRPPQG
Sbjct: 421 ASGANPQDNINRRPPQG 435

[Close]

BLAST of Carg00348 vs. ExPASy TrEMBL
Match: A0A6J1ISS6 (small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480278 PE=4 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 7.7e-214
Identity = 398/438 (90.87%), Postives = 405/438 (92.47%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MAN+RTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAA ELAEF
Sbjct: 1   MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           NSLV IFSSP SFQRSGTNSSVDNG VPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH
Sbjct: 61  NSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGC EINH
Sbjct: 121 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCAEINH 180

Query: 249 KNLAESLKSLGNRAMQSKLYS----DAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSE 308
           KNLAESLKSLG   + S+ YS      I + S  + +     +    RAAAYTQIQKYSE
Sbjct: 181 KNLAESLKSLG---LCSQNYSPTQLSCIVVQSHYVKIMPFTTVTELLRAAAYTQIQKYSE 240

Query: 309 ATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVA 368
           ATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVA
Sbjct: 241 ATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVA 300

Query: 369 EQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFM 428
           EQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFM
Sbjct: 301 EQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFM 360

Query: 429 NMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTG 488
           NMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTG
Sbjct: 361 NMAANHGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFTG 420

Query: 489 AASGTNPQDNINRRPPQG 503
           AA G NPQDNINRRPPQG
Sbjct: 421 AAPGGNPQDNINRRPPQG 435

[Close]

BLAST of Carg00348 vs. ExPASy TrEMBL
Match: A0A6J1C318 (small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111008001 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.7e-198
Identity = 372/440 (84.55%), Postives = 395/440 (89.77%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MANLRTDSPVACRIV AFLDFLNSVEPGPGVDVEG+EVAKQCLEQVFKV+SPA+ EL EF
Sbjct: 1   MANLRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGLEVAKQCLEQVFKVESPASDELTEF 60

Query: 129 NSLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCSRESH 188
           +SLV IFSSPESFQR  TNS VDNGA+PM+H   LN+N+S ANLSKS + QGDD SRESH
Sbjct: 61  DSLVDIFSSPESFQRPDTNSFVDNGALPMDHHCPLNLNNSDANLSKSPKSQGDDWSRESH 120

Query: 189 PLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCTEINH 248
           PLGVL+DEL GQFVLALEKL YFRT+ADG+DDPDQLERAT LFHDALGEMERSGCTEIN+
Sbjct: 121 PLGVLKDELLGQFVLALEKLHYFRTTADGKDDPDQLERATLLFHDALGEMERSGCTEINY 180

Query: 249 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 308
           KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD
Sbjct: 181 KNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRD 240

Query: 309 SLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKL 368
            LKSIEIDPNYSKAYSRLGLALYDQG+YRDAIDKGF+KAL LDPNNEAVRENIRVAEQKL
Sbjct: 241 CLKSIEIDPNYSKAYSRLGLALYDQGNYRDAIDKGFIKALMLDPNNEAVRENIRVAEQKL 300

Query: 369 KEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFMNMAA 428
           KEAQRQ+ HEQGSSSRSQESQ  QS G SRND+ SPPFPSMPFN TLPSEISN+FMNMAA
Sbjct: 301 KEAQRQSQHEQGSSSRSQESQ-NQSGGGSRNDNTSPPFPSMPFNVTLPSEISNMFMNMAA 360

Query: 429 N-----HGQHTGVGGEENRSGNGSADDPRTNMDANFSFSVGDGMPQDLNGALRSMMQMFT 488
           N     HGQH   G EENR+GNG  DDP  +MD NFSFS+GDGMPQDLNGALRSMMQMFT
Sbjct: 361 NATTPFHGQHPQDGQEENRNGNG-LDDPGPSMDGNFSFSIGDGMPQDLNGALRSMMQMFT 420

Query: 489 GAASGTNPQDNINRR-PPQG 503
           G+A   NPQD+ NRR PPQG
Sbjct: 421 GSAPSGNPQDDTNRRSPPQG 438

[Close]

BLAST of Carg00348 vs. TAIR 10
Match: AT4G08320.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 346.7 bits (888), Expect = 3.2e-95
Identity = 214/443 (48.31%), Postives = 290/443 (65.46%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MA L TDSP+  +IV +FL+FL+SVE  PGVD EG+EVA++CL + FK+ S ++ +  + 
Sbjct: 1   MAKLTTDSPLCRKIVRSFLNFLDSVEVAPGVDEEGLEVARECLREAFKLNSDSSRDDDDD 60

Query: 129 N----SLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCS 188
           +    SLV +F+S ++      N ++     P    ++ + + SG+++S        D  
Sbjct: 61  SFKPISLVNLFTSLDN------NETIPPPPPPPVAATTQDPSSSGSHVSV-------DTC 120

Query: 189 RESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCT 248
           +E    G  +DELFGQ   ALEK+RYFR + DG DDP QLE+ATR+FHD + EME+SGC 
Sbjct: 121 KEPSFTGTSRDELFGQLFGALEKVRYFRNTPDGDDDPAQLEKATRIFHDCVNEMEKSGCQ 180

Query: 249 EINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSE 308
             +  +LAE+LK  GN+AMQS LY +A+ELYS AIAL + NA++YCNRAAAYTQI   SE
Sbjct: 181 TFDVNSLAETLKCQGNKAMQSNLYLEAVELYSFAIALTDKNAVFYCNRAAAYTQINMCSE 240

Query: 309 ATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVA 368
           A +D LKSIEIDPNYSKAYSRLGLA Y QG Y +AI+KGF KAL LDP+NE+V+ENIRVA
Sbjct: 241 AIKDCLKSIEIDPNYSKAYSRLGLAYYAQGKYAEAIEKGFKKALLLDPHNESVKENIRVA 300

Query: 369 EQKLKEAQRQTHHEQGSSS-RSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIF 428
           EQK++E Q++    Q +S+  +QE +     G        P   SMP N     ++ ++F
Sbjct: 301 EQKIREEQQRQRRSQNTSTFYTQEPEMGGGQGI-------PSQFSMPVN----PDLMSMF 360

Query: 429 MNMAAN--HGQHT-----GVGGEENRSGNGSADDPRTNMDANFSFSVG--DGMPQDLNGA 488
           MNMA N   G H+     G GG+  R+G   AD+P  ++  N +  +G  + MP+DL+GA
Sbjct: 361 MNMAGNTFPGNHSRNNEGGAGGDGTRNG---ADEPEIHVGGNINIDLGGTEQMPEDLSGA 416

Query: 489 LRSMMQMFTGAASGT---NPQDN 495
           LRSMMQMF G+  GT   NPQD+
Sbjct: 421 LRSMMQMFGGSMGGTGNNNPQDS 416

[Close]

BLAST of Carg00348 vs. TAIR 10
Match: AT4G08320.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 346.3 bits (887), Expect = 4.2e-95
Identity = 212/442 (47.96%), Postives = 288/442 (65.16%), Query Frame = 0


Query: 69  MANLRTDSPVACRIVLAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAGELAEF 128
           MA L TDSP+  +IV +FL+FL+SVE  PGVD EG+EVA++CL + FK+ S ++ +  + 
Sbjct: 1   MAKLTTDSPLCRKIVRSFLNFLDSVEVAPGVDEEGLEVARECLREAFKLNSDSSRDDDDD 60

Query: 129 N----SLVGIFSSPESFQRSGTNSSVDNGAVPMEHCSSLNVNDSGANLSKSSRPQGDDCS 188
           +    SLV +F+S ++      N ++     P    ++ + + SG+++S        D  
Sbjct: 61  SFKPISLVNLFTSLDN------NETIPPPPPPPVAATTQDPSSSGSHVSV-------DTC 120

Query: 189 RESHPLGVLQDELFGQFVLALEKLRYFRTSADGRDDPDQLERATRLFHDALGEMERSGCT 248
           +E    G  +DELFGQ   ALEK+RYFR + DG DDP QLE+ATR+FHD + EME+SGC 
Sbjct: 121 KEPSFTGTSRDELFGQLFGALEKVRYFRNTPDGDDDPAQLEKATRIFHDCVNEMEKSGCQ 180

Query: 249 EINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSE 308
             +  +LAE+LK  GN+AMQS LY +A+ELYS AIAL + NA++YCNRAAAYTQI   SE
Sbjct: 181 TFDVNSLAETLKCQGNKAMQSNLYLEAVELYSFAIALTDKNAVFYCNRAAAYTQINMCSE 240

Query: 309 ATRDSLKSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVA 368
           A +D LKSIEIDPNYSKAYSRLGLA Y QG Y +AI+KGF KAL LDP+NE+V+ENIRVA
Sbjct: 241 AIKDCLKSIEIDPNYSKAYSRLGLAYYAQGKYAEAIEKGFKKALLLDPHNESVKENIRVA 300

Query: 369 EQKLKEAQRQTHHEQGSSSRSQESQYQQSSGASRNDSPSPPFPSMPFNGTLPSEISNIFM 428
           EQK++E Q++    Q ++S     + +   G        P   SMP N     ++ ++FM
Sbjct: 301 EQKIREEQQRQRRSQQNTSTFYTQEPEMGGGQG-----IPSQFSMPVN----PDLMSMFM 360

Query: 429 NMAAN--HGQHT-----GVGGEENRSGNGSADDPRTNMDANFSFSVG--DGMPQDLNGAL 488
           NMA N   G H+     G GG+  R+G   AD+P  ++  N +  +G  + MP+DL+GAL
Sbjct: 361 NMAGNTFPGNHSRNNEGGAGGDGTRNG---ADEPEIHVGGNINIDLGGTEQMPEDLSGAL 417

Query: 489 RSMMQMFTGAASGT---NPQDN 495
           RSMMQMF G+  GT   NPQD+
Sbjct: 421 RSMMQMFGGSMGGTGNNNPQDS 417

[Close]

BLAST of Carg00348 vs. TAIR 10
Match: AT2G42810.1 (protein phosphatase 5.2 )

HSP 1 Score: 89.7 bits (221), Expect = 7.0e-18
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 252 AESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLK 311
           AE  KS  N A +   YS AI+LY+ AI L  NNA+Y+ NRA A+T++++Y  A +D+ K
Sbjct: 13  AEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASK 72

Query: 312 SIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEA 371
           +IE+D  YSK Y R G A    G ++DA+ K F +  +L PN+         A +KLKE 
Sbjct: 73  AIEVDSRYSKGYYRRGAAYLAMGKFKDAL-KDFQQVKRLSPNDPD-------ATRKLKEC 126

Query: 372 QR 374
           ++
Sbjct: 133 EK 126

[Close]

BLAST of Carg00348 vs. TAIR 10
Match: AT2G42810.2 (protein phosphatase 5.2 )

HSP 1 Score: 89.7 bits (221), Expect = 7.0e-18
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 252 AESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSLK 311
           AE  KS  N A +   YS AI+LY+ AI L  NNA+Y+ NRA A+T++++Y  A +D+ K
Sbjct: 13  AEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASK 72

Query: 312 SIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQKLKEA 371
           +IE+D  YSK Y R G A    G ++DA+ K F +  +L PN+         A +KLKE 
Sbjct: 73  AIEVDSRYSKGYYRRGAAYLAMGKFKDAL-KDFQQVKRLSPNDPD-------ATRKLKEC 126

Query: 372 QR 374
           ++
Sbjct: 133 EK 126

[Close]

BLAST of Carg00348 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative )

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-16
Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 251 LAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDSL 310
           +AE  KS GN A  S  Y+ AI  ++ AI L   N I Y NR+A+Y  + +Y EA  D+ 
Sbjct: 1   MAEEAKSKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAK 60

Query: 311 KSIEIDPNYSKAYSRLGLALYDQGSYRDAIDKGFMKALQLDPNNEAVRENIRVAEQ 367
           K+IE+ P++SK YSRLG A      + +A+D  + K L++DP+NE ++  +  A +
Sbjct: 61  KTIELKPDWSKGYSRLGAAFIGLSKFDEAVD-SYKKGLEIDPSNEMLKSGLADASR 115

The following BLAST results are available for this feature:

BLAST of Carg00348 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031691.1	4.0e-281	100.00	Small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita...	[more]
KAG6608061.1	3.4e-280	99.80	Small glutamine-rich tetratricopeptide repeat-containing protein beta, partial [...	[more]
XP_022941048.1	1.3e-239	99.31	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [C...	[more]
XP_023525254.1	7.1e-238	98.39	small glutamine-rich tetratricopeptide repeat-containing protein 2 [Cucurbita pe...	[more]
XP_022980999.1	1.9e-235	97.70	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [C...	[more]

BLAST of Carg00348 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VD33	4.2e-23	45.16	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus mus...	[more]
Q80W98	4.2e-23	45.16	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus ...	[more]
Q96EQ0	1.2e-22	45.16	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sa...	[more]
Q8BJU0	3.9e-21	45.16	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus mu...	[more]
O70593	3.9e-21	45.16	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus...	[more]

BLAST of Carg00348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FR00	6.3e-240	99.31	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS...	[more]
A0A6J1J0T2	9.3e-236	97.70	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 OS...	[more]
A0A6J1FK29	2.0e-217	91.99	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS...	[more]
A0A6J1ISS6	7.7e-214	90.87	small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 OS...	[more]
A0A6J1C318	2.7e-198	84.55	small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Momordica ...	[more]

BLAST of Carg00348 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08320.1	3.2e-95	48.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G08320.2	4.2e-95	47.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G42810.1	7.0e-18	41.80	protein phosphatase 5.2	[more]
AT2G42810.2	7.0e-18	41.80	protein phosphatase 5.2	[more]
AT4G12400.1	1.3e-16	39.66	stress-inducible protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 354..374
None	No IPR available	GENE3D	1.20.5.420	Immunoglobulin FC, subunit C	coord: 71..140 e-value: 3.0E-6 score: 28.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..465
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 378..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..186
None	No IPR available	PANTHER	PTHR45831	LD24721P	coord: 75..499
None	No IPR available	PANTHER	PTHR45831:SF2	LD24721P	coord: 75..499
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 252..285 e-value: 0.13 score: 21.3 coord: 286..319 e-value: 0.007 score: 25.6 coord: 320..354 e-value: 0.0025 score: 27.0
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 286..319 score: 8.7029
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 244..402 e-value: 1.8E-36 score: 127.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 251..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00348-RA	Carg00348-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006620	posttranslational protein targeting to endoplasmic reticulum membrane
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0016020	membrane
cellular_component	GO:0072380	TRC complex
molecular_function	GO:0060090	molecular adaptor activity
molecular_function	GO:0005515	protein binding