Carg00325 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00325
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SWI/SNF complex subunit SWI3C-like
Location	Carg_Chr04: 6596123 .. 6603548 (-)
RNA-Seq Expression	Carg00325
Synteny	Carg00325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCCTGTTCTTCTTCTTCTTGTTGTTTTCTCTGTATAATTTCATCATTTACGCATTCTCCACTACATTTCTCATGTTGAAATTCTGTTAATGCTGTGTAATTTTTGGTTTTCACAAAAACCTTACCAGGATCTCGCGGAAAATGGAAGAAGAAGAAGAGGGACACGCAAATTGGCCGTAGAAACAACTATGGGAATAGTAATAACAACGGCAGCAACAAGCATGATGATGATGATGAAGATGAAGATCTTGCCACTGTTGAAAATGAGGAAATGGAACGCGATAACGACGATTCTGAGGACCCTCAGCCGACGCGCAATTTGAGTCTTCAAGAGACTGAACTCTTGTCGGATGATAAAATGCGAGTCTCTGAGTTTCCTCAGGTGGTCAAGCGGGCTGTCACTCGGCCTCACTCTTCTGTGTTGGCTGTTGTGGCAATGGAGAGGGCAAATCAAAGTAAGGTGCTGTCTGGGAATCCCTTGATTTTGGAGAATGTGTCTTACGGGCAGCTGCAGGCGCTGTCTGCTATGCCTGCGGATAGTCCGGCTTTGCTGGATCAAGAGAGGGTGGAGGCTGGGAATGCGGCGTATGTGATAACTCCACCATCGATTATGGAAGGTTGTGGCGTGGTCAAGAGGTTTGGGAGTAGAGTTCATGTTGTTCCTATGCACTCAGGTCTGATCCTCTTGTCCTTGTCAAGTTAGTGAATTCCTACATATATATTTTGGGGGAAAATAATATACATTATCATCTGTACCTTACATTTGTAGTAGGATAAATTCACGGTTCTTGTTAGCACTATTATGAACAAATGAGAGCTAATTTTGTCTCCAAATAATAACTTCTTCGGGAATCTTAATGTGTGTTCTTGTGAAATGAAACGTTACCTTCCGTGTGAGATTCCACATTGGTTGTGGAGGAGAACAAAGCATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAGAAACCTTGAGGGGAAGCCCAAAGATGACAATATCTACTAGTAGTGGGCTTGGGCTACAAATGGTATCAGAGTCAGACACCAAGCGATGTGTCAGCGAGGAGGTTGAGCCCCGATGGGGGGTAGATTCGAGGCGGTGTGCCAGCAAGGACACTGGGCCCCGAAGGGAGGTGGATTGGGGGTCCCACATCGATTGGAGAAGGGAACGAATGCCAGCGAGGATGCTGGGCTCCGAAGGGGGATGGACTGTGAGATCTCACATCGGTTAAGGTGTGGAAACCTCTCCCTAACTGACGCATTTTAAAAACCTTGAGGGGATGCCCGAAAGGGAAAGTCCAAAGAGGACAATATCGGCTAGCGGTGAGCATGGGCTGTTACATAAGCGTAATATATGGTTGAATAGCTTGAATTTATAAATAGTTTTACTTACTGAGTTCTGTAATTGTTAGTATGATGCAGTTAAAGTGAGGTACTATTGGGTAAAAAATCACAATAGAATTTGTATGTTATGTTAGTGTTACATGCCTACAGCAGATTTCTATTATGTGATAGTTGATTTGTTGGAAACAGATTGGTTTTCACCTGCCACAGTGCATCGACTCGAGAGACAAGTTGTTCCACATTTTTTCTCTGGGAAATTGCCTGACCGCACTCCTGAGAAGTATATGGAAATCCGAAACTTTGTTGTTGCCAAATACATGGAGAATCCTGAGAAAAGGGTCACAGTTTCAGACTGCCAAGGATTTGTTAATGGTGTCAGTAATGATGATTTAACTCGAATTGTTCGATTTCTTGATCATTGGGGTATTATTAATTATTGTGCCCCGACACCTAGTTGTGAACCATGGAATAGAAGTTCATACTTGAGAGAAGATATGAACGGTGAGATTCATGTGCCATCAGCTGCTTTGAAGCCTATTGATAGCTTAATCAAATTTGACAAACCAAAATGTAGGCTCAAGGCAGTCGATATCTATTCGGCACGTTCATGCCATGATGACAATGATGATTTATGTGATTTGGATAACAGAATTCGGGAGCGTCTAGCTGAAAATCATTGTAGCTCGTGTTCTCGAACAGTTCCCATTGTATGCTACCAATCGCAGAAGGAGGTTAGTTTCCCTATTGTACTCCATTGTTTATCTGACTCAAGTATTTTAGCATATGAAGCTTGTATATATGCTTGAATGAATGATGGTTGTCAGGGCAAAGATAAGTACAGTTAGAGGCAATAAATATAATGAAAATTAGAAAACAATGTTATAGTGATGTGTCGTGTGACATGCCCCTGACATTCGAAACCTTTTCCTGTTGAGAGTAAAATAAAAACGACAGGATTTTAAATTATTGAACACGTGGTTGTCTGGAACGGTAAATTCTTGAGACCTTGGGGCATAGGCCATTCAACTTTGTCGAGGGAGAAAAGGAGCGGAAATAGTAGTAGACTAGGCAATGTTTTCTACTACTATATATATCCACCGGTATATGTAGTAGTAGAAACCTGGAGTGAATTAGTTGTATGCTTGAAGAAAACATCACCGGTTGTTGGCATCCTTGCAACAGGTAGATGTTTTACTTTGCACCGACTGCTTCCATGAAGGAAAATATGTTGCTGGTCATTCGAGCATCGATTTTCTGAGGGTGGACATGACGAAAGAGTATGGTGAACTAGATAGCGAAAATTGGACCGATCAAGAAACTCTATTGCTTTTAGAGGCGATAGAATTGTATAATGAGAATTGGAATGAAATAACAGAACATGTTGGGTCCAAGTCTAAAGCTCAATGCATTATACATTTTCTCCGTCTATCGGTTGAAGATGGTATTCTAGAAAATGTTGATGTGCCTGGCGTTCCTCTCTCATCCAATTCTTCACATGGAAAAGATAACGAGAAGTCACATTCAAATATGAATGGAAATGTAGCAGGTACTTTTTAACTTTTAACTAATAGTTTCTCTCATAATTATGACTTTTTGACATTTTCTTTTTCTAAATATTTGTTTCTTTCTTTAGGATCTTCCTCTCAAGACAATAAAGAGATGCATGATAGACTCCCATTTGCTAATTCTGGGAACCCAGTCATGGCGTTGGTATGTGTCCAACACTGAGCTTTTAGCCCCTCCATGTGCCATTTCCATAAATTGCTCCACTCAAGTAAAATTTTCTGCTATCTACTTATTTTCATTGTGTCAGCGGCTCGTTTATGGGAATGAGTAATAGAACTAGAAAAAGGCCTGGTTGATAATTTGGAATAATGAGTATAAGACAATTAAGCAGGGAAGAAAGCTGTGAGGAGGCTAACCTGTTTGAAGCTGTCGGAGTTCTGTAGTACTAATATTAGTAGCTTGTGTCAAAGTAATAAGAGTGCACACAAGATAGAATTGTAGGGTTAAGAAGCTTATCCGTTTGAAGCTGCTCGAGGCCTGGAGTGAATTAGTTGTAGTACTAGTATTGGTAGCATTTGTCAGAGTAATTAAGTGTACACACAAGATAGAATTGTATGGTTAGATGGCTTACCTGTTTGAAGCTGTTTTAAATGGGTGTGTAATGGCCTAAGCCCTGCTAGCAGATATTGTCCTTTTTGGGCTTTCCATTTCCCGGCTTCCCCTCAAGATTTTTAGAATACGTCTGTTAGGGAGAGGTTTCCATACCCTTAAAAAGTGTATTTCGTTCTCCTCCCCAATAGATGTGAGATCTCACACTCCACCCTCTTTGGGGCCCAGTGTCTTCGCTAGCCCTCATTCCCTTCTTTAATCGACGTGGGACCCCTCAATCCCCACCCCATTTGGGACCCAACATCCTTGTAGGGTTAGAAAGAAGGTCGTCTAGAAAATAGTTGAGCGAGGCACACTTGAATTGGCTTGATTCTCGGAAGTAAGTGAAGGAAAAGGAGAGATAAAGTTGAGCTCTTTTCTTATCTTCAACAAGAATGTAAAGTCATATACTTTAACTACAATTGTTTTAAAATCAATGGTAACTAAGGGGTTTTCATTAATTTTACAGTTTGAAGTGTAGTCACCTGATCTCAATGAACGATACACTGGGTAATATCTTGACTTGCTGCTGTTTCCACCATAGACGATTTGTCTTGCTCGGCCTTGAAAGCATGGGCTGTATTTCAAGCGGTTTAATTTCAAATTTCTACGTTTTATTCTGCTAAGAAGTAACTTTCATCGAGATGTTGGACTCTTCATTTCCAATTTAATATTGATCTAGATCTGATTGAAGGAGCTTTGATTATGAGGTTCTATTTAAAAAATCGAGTATTACTATTGATAAATAGGGTTGCAATTGATTTAACTTCTGGATATTTGCAAGGTTGCTTTTCTTGCATCTGCTATTGGACCAAGAGTTGCTGCATCATGTGCTCATGCATCCTTAGCTGCATTATCTGAGGACAGTGCAGCTTCTTCTGGGAGCATATTTCAAGTGGAAGGTTCTGTGAATCCTAGTAGGTAAATTGCATTTTTTACTCATATGACTTATTCAACTAGATACTTTTCTTCAACAAATGCTGTTAAGTTTTAACCTTGAACATTTGGAACGGTTCTTGCGAGTTGCTGTTTTATTTGTAAAACCTTATTTTATGGCATATATAGCTTTGCTTCAGTGTCGACACTGGATTAGTAGATCTTGAAAAAGGAGCTTGTGCTTGCATGTTTGTTTTACTGAGGGAAAGCCCAAGGAAGAAAAATGTAACCGGCATAAGGGCATATCCCTTGGAAAATAAGGGCATCTAACATTTATCCTCTAAAATAAGGGCATCTAGGCTAATGTTAGATACGTGGGATATTTTAGAGGATAAATGTAACTGGCATATCCCACCGCTAACAAATATTTTCTTCTTTGGGCTTTCCCTGTCGGGCTTCTCCTTAAGTTTTTTTTTAAATGCATCTGCTAGGAAGAGGTTTCCATTCTCTTAAAAGGAATGTTTCGTTCTCTCTCCAACCGGTTTGGGATCTCCAATCCACCCCTCTTGGGGGCCCAGCGTCCTCGCTAGCACACCGCCTGGTGTCTGGCTCTGATACCATTTGTAACAGCTTAAGCCCATCGTTAGCAAATATTGTCCTATTTGGGCTTTTCCTTCCAGGCTTCCCATCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACGCCCTTAAAAGGAATACTTCGTTTCCCTCTCTAACCGAGGTGAGATTTCACAATAAAAATTTATTCCAACTTCGTCATAAGGTGTTTTAAGTACAATTGCATGAATTCTATATTTAAAGTAAGATTTATTTCAAGATTGAATATTCTTTTCCAATAATAAGGACGAATGTGGAGGTCACACATGGCAGAGACGGTGGCTCCTATGGAAAGCTTCCAAATTCAGTCAAGCTAAAAGGTTTGATTTGAGATTTGTTCTATTTCTTGACAAATGTTTTAGATTATTGTGAAACTTATTCAATATATATGGTGGATTCAGATGAGAATAAGGCAGAGACAGAGGTAACACTATTATCTGCTGAAAGAGTTAAAGTTGCAGCAAAAGTAGGTCTTGCTGCCGCTGCAACAAAGGCTAAATTGTTCGCAGACCACGAAGAACGAGAAATCCAACGGTTGTCTGCTAATATTATAAATCATCAGGTATTGCCCTTATAAATGAGTAGTAGTAGTAGTCAGAAACTAAGTGCCCTTTTCACTTAATCATTCAGAACTATACGTTTATAAGTTCATGTTCTGCTTGAACTACAATTTGGATCGTGTGTTTTGAACAAGCTACTACGACCTGTTTGACTGATAAACATTGGTTAGTTGTTGTGATATCCCACATTGGTTGAGGAGGAGAACGAAATACCCTTTATAAGGGTGTGGAAACCTTTCCCTAACAAACACGTTTTAAAGCCTTGAGGGGAAGCCTGAAAGGGAAAGCCCAAAGAGGACAAATCTACTAGCGGTGGGCCTGAGCCGTTACAGTCATGATATATTTGAGCCTAGTTCTCGAAATGACATATGGAGGGGTTTTGAACGTGCAGTATTTGACCTTTTTCTCCAAAATTTCCTTGTTTTTACTTTCGACTCTGAATGGGCGATGTTTTATTAATTAAAAGCCTGTTCATCAGTTTGGGCAATAATTTTTTTTTTTTTTGGGGGATAAGATTGACTGTCTGTTGTCTGCTGGGAAAGTTGATATTTATGTGTTTCACTCTTAAGAGTAGTTGATGGTCTCTGTTGTGTCTAAACTTATGAACAGTTAAAAAGACTTGAGTTGAAGCTGAAGCAGTTTGCAGAAGTAGAAACCTTCTTGATGAAGGAATGCGAACAAGTCGAGAGGACAGGGCAGAGATTTGTTGCAGAACGAGCTCGAATGTTAGGTGTCCAATTTGGAGCTGCTGGAGTCAGCTCACCTGCGAGTTTACGGGGGGTTATTCCTCCCGTGGTAAACAACAATAGGGTGAGCTCACCTGCGAGTAGGCCGAATGTGATCTCGCCTCCACCATCCCAGCCGAGCGTTTCGGGGTATGGCAACAACCAACCACTTCATCCCCACATGTCGTACGTGCCCAGGCAGTCGATGTTTGGCTTGGGGCAAAGGGTACCTCTGTCAGCAATTCAGCAGCAACAGCAGCAGCTGGCCTCAACGACTTCGTCTAATGCTATGTTCAATGGCCCGAGCAATGCACAGGCTTCTCTCAGTCACCCAATGATGAGGCCAGTTACTGGATCCAGCTCTGGATTAGGCTGAACTTGGAAGAAGGTATGTGAATTCCTTTTAAGGTCGACGACGCGTGCAGGTAAAAGAAAAACGATAATATTCCATGAGAAAGAGTTGTCCATTCGTCTAACGTTTTCTTTCTTTGGGAGAAACATGGGAGATTAACCTGAGGCAATAGTAGTAGGGATTGTAATTGCATTCAATTAGATGTGAAAAAAGGGGAACAAAAAGGAACAAAAAGGAACAAAAAGGAACAAAAAGGAAGAGGAGAAAGTTAGTTGTTGTAGTGAAAGCCATTTATGAAAGTGCTTCCGTTCCCTTTCTTTTACCCCCCCGATGAAAGTGCTAGATTTCAGGTAGAGAGGGATGGTTAGAAGAATTAGTAATGGTAGAATTGGCTTCTCTTTCAGGATCTTTTTCCTACCTTCTCCACTTTTTACTTCTCTTCATCATCCATCTTTAATTTTCACCTCACCCCATTTCGTCCCTTTAAAAAGTATGGTCGTTTTATTGAGTTGTGGTCGTTTTATTGAGTTGATTTGCCTACACGTCTTGTCTTTACTCCTATATTAGGAGTTATTTGTAGTACGAGGATTCTTGATATGTTGACATATCTTGTTTTTACTCATATATTAGGAGTTACTTCACATTTTACGTAGCTTCCTTCCTTCAGTCTTGGATCTTTGATATGTTGACACGTTTTGTCTTTACTGTTGTATTGGGAGTTGCTTCACATTGTACATAGCTTCCTTCCTTCAGTTTGAGA

mRNA sequence

TCCCCTGTTCTTCTTCTTCTTGTTGTTTTCTCTGTATAATTTCATCATTTACGCATTCTCCACTACATTTCTCATGTTGAAATTCTGTTAATGCTGTGTAATTTTTGGTTTTCACAAAAACCTTACCAGGATCTCGCGGAAAATGGAAGAAGAAGAAGAGGGACACGCAAATTGGCCGTAGAAACAACTATGGGAATAGTAATAACAACGGCAGCAACAAGCATGATGATGATGATGAAGATGAAGATCTTGCCACTGTTGAAAATGAGGAAATGGAACGCGATAACGACGATTCTGAGGACCCTCAGCCGACGCGCAATTTGAGTCTTCAAGAGACTGAACTCTTGTCGGATGATAAAATGCGAGTCTCTGAGTTTCCTCAGGTGGTCAAGCGGGCTGTCACTCGGCCTCACTCTTCTGTGTTGGCTGTTGTGGCAATGGAGAGGGCAAATCAAAGTAAGGTGCTGTCTGGGAATCCCTTGATTTTGGAGAATGTGTCTTACGGGCAGCTGCAGGCGCTGTCTGCTATGCCTGCGGATAGTCCGGCTTTGCTGGATCAAGAGAGGGTGGAGGCTGGGAATGCGGCGTATGTGATAACTCCACCATCGATTATGGAAGGTTGTGGCGTGGTCAAGAGGTTTGGGAGTAGAGTTCATGTTGTTCCTATGCACTCAGATTGGTTTTCACCTGCCACAGTGCATCGACTCGAGAGACAAGTTGTTCCACATTTTTTCTCTGGGAAATTGCCTGACCGCACTCCTGAGAAGTATATGGAAATCCGAAACTTTGTTGTTGCCAAATACATGGAGAATCCTGAGAAAAGGGTCACAGTTTCAGACTGCCAAGGATTTGTTAATGGTGTCAGTAATGATGATTTAACTCGAATTGTTCGATTTCTTGATCATTGGGGTATTATTAATTATTGTGCCCCGACACCTAGTTGTGAACCATGGAATAGAAGTTCATACTTGAGAGAAGATATGAACGGTGAGATTCATGTGCCATCAGCTGCTTTGAAGCCTATTGATAGCTTAATCAAATTTGACAAACCAAAATGTAGGCTCAAGGCAGTCGATATCTATTCGGCACGTTCATGCCATGATGACAATGATGATTTATGTGATTTGGATAACAGAATTCGGGAGCGTCTAGCTGAAAATCATTGTAGCTCGTGTTCTCGAACAGTTCCCATTGTATGCTACCAATCGCAGAAGGAGGTAGATGTTTTACTTTGCACCGACTGCTTCCATGAAGGAAAATATGTTGCTGGTCATTCGAGCATCGATTTTCTGAGGGTGGACATGACGAAAGAGTATGGTGAACTAGATAGCGAAAATTGGACCGATCAAGAAACTCTATTGCTTTTAGAGGCGATAGAATTGTATAATGAGAATTGGAATGAAATAACAGAACATGTTGGGTCCAAGTCTAAAGCTCAATGCATTATACATTTTCTCCGTCTATCGGTTGAAGATGGTATTCTAGAAAATGTTGATGTGCCTGGCGTTCCTCTCTCATCCAATTCTTCACATGGAAAAGATAACGAGAAGTCACATTCAAATATGAATGGAAATGTAGCAGGATCTTCCTCTCAAGACAATAAAGAGATGCATGATAGACTCCCATTTGCTAATTCTGGGAACCCAGTCATGGCGTTGTTTGAAGTGTAGTCACCTGATCTCAATGAACGATACACTGGGTAATATCTTGACTTGCTGCTGTTTCCACCATAGACGATTTGTCTTGCTCGGCCTTGAAAGCATGGGCTGTATTTCAAGCGGTTTAATTTCAAATTTCTACGTTTTATTCTGCTAAGAAGTAACTTTCATCGAGATGTTGGACTCTTCATTTCCAATTTAATATTGATCTAGATCTGATTGAAGGAGCTTTGATTATGAGGTTCTATTTAAAAAATCGAGTATTACTATTGATAAATAGGGTTGCAATTGATTTAACTTCTGGATATTTGCAAGGTTGCTTTTCTTGCATCTGCTATTGGACCAAGAGTTGCTGCATCATGTGCTCATGCATCCTTAGCTGCATTATCTGAGGACAGTGCAGCTTCTTCTGGGAGCATATTTCAAGTGGAAGGTTCTGTGAATCCTAGTAGGACGAATGTGGAGGTCACACATGGCAGAGACGGTGGCTCCTATGGAAAGCTTCCAAATTCAGTCAAGCTAAAAGATGAGAATAAGGCAGAGACAGAGGTAACACTATTATCTGCTGAAAGAGTTAAAGTTGCAGCAAAAGTAGGTCTTGCTGCCGCTGCAACAAAGGCTAAATTGTTCGCAGACCACGAAGAACGAGAAATCCAACGGTTGTCTGCTAATATTATAAATCATCAGTTAAAAAGACTTGAGTTGAAGCTGAAGCAGTTTGCAGAAGTAGAAACCTTCTTGATGAAGGAATGCGAACAAGTCGAGAGGACAGGGCAGAGATTTGTTGCAGAACGAGCTCGAATGTTAGGTGTCCAATTTGGAGCTGCTGGAGTCAGCTCACCTGCGAGTTTACGGGGGGTTATTCCTCCCGTGGTAAACAACAATAGGGTGAGCTCACCTGCGAGTAGGCCGAATGTGATCTCGCCTCCACCATCCCAGCCGAGCGTTTCGGGGTATGGCAACAACCAACCACTTCATCCCCACATGTCGTACGTGCCCAGGCAGTCGATGTTTGGCTTGGGGCAAAGGGTACCTCTGTCAGCAATTCAGCAGCAACAGCAGCAGCTGGCCTCAACGACTTCGTCTAATGCTATGTTCAATGGCCCGAGCAATGCACAGGCTTCTCTCAGTCACCCAATGATGAGGCCAGTTACTGGATCCAGCTCTGGATTAGGCTGAACTTGGAAGAAGGTATGTGAATTCCTTTTAAGGTCGACGACGCGTGCAGGTAAAAGAAAAACGATAATATTCCATGAGAAAGAGTTGTCCATTCGTCTAACGTTTTCTTTCTTTGGGAGAAACATGGGAGATTAACCTGAGGCAATAGTAGTAGGGATTGTAATTGCATTCAATTAGATGTGAAAAAAGGGGAACAAAAAGGAACAAAAAGGAACAAAAAGGAACAAAAAGGAAGAGGAGAAAGTTAGTTGTTGTAGTGAAAGCCATTTATGAAAGTGCTTCCGTTCCCTTTCTTTTACCCCCCCGATGAAAGTGCTAGATTTCAGGTAGAGAGGGATGGTTAGAAGAATTAGTAATGGTAGAATTGGCTTCTCTTTCAGGATCTTTTTCCTACCTTCTCCACTTTTTACTTCTCTTCATCATCCATCTTTAATTTTCACCTCACCCCATTTCGTCCCTTTAAAAAGTATGGTCGTTTTATTGAGTTGTGGTCGTTTTATTGAGTTGATTTGCCTACACGTCTTGTCTTTACTCCTATATTAGGAGTTATTTGTAGTACGAGGATTCTTGATATGTTGACATATCTTGTTTTTACTCATATATTAGGAGTTACTTCACATTTTACGTAGCTTCCTTCCTTCAGTCTTGGATCTTTGATATGTTGACACGTTTTGTCTTTACTGTTGTATTGGGAGTTGCTTCACATTGTACATAGCTTCCTTCCTTCAGTTTGAGA

Coding sequence (CDS)

ATGGAACGCGATAACGACGATTCTGAGGACCCTCAGCCGACGCGCAATTTGAGTCTTCAAGAGACTGAACTCTTGTCGGATGATAAAATGCGAGTCTCTGAGTTTCCTCAGGTGGTCAAGCGGGCTGTCACTCGGCCTCACTCTTCTGTGTTGGCTGTTGTGGCAATGGAGAGGGCAAATCAAAGTAAGGTGCTGTCTGGGAATCCCTTGATTTTGGAGAATGTGTCTTACGGGCAGCTGCAGGCGCTGTCTGCTATGCCTGCGGATAGTCCGGCTTTGCTGGATCAAGAGAGGGTGGAGGCTGGGAATGCGGCGTATGTGATAACTCCACCATCGATTATGGAAGGTTGTGGCGTGGTCAAGAGGTTTGGGAGTAGAGTTCATGTTGTTCCTATGCACTCAGATTGGTTTTCACCTGCCACAGTGCATCGACTCGAGAGACAAGTTGTTCCACATTTTTTCTCTGGGAAATTGCCTGACCGCACTCCTGAGAAGTATATGGAAATCCGAAACTTTGTTGTTGCCAAATACATGGAGAATCCTGAGAAAAGGGTCACAGTTTCAGACTGCCAAGGATTTGTTAATGGTGTCAGTAATGATGATTTAACTCGAATTGTTCGATTTCTTGATCATTGGGGTATTATTAATTATTGTGCCCCGACACCTAGTTGTGAACCATGGAATAGAAGTTCATACTTGAGAGAAGATATGAACGGTGAGATTCATGTGCCATCAGCTGCTTTGAAGCCTATTGATAGCTTAATCAAATTTGACAAACCAAAATGTAGGCTCAAGGCAGTCGATATCTATTCGGCACGTTCATGCCATGATGACAATGATGATTTATGTGATTTGGATAACAGAATTCGGGAGCGTCTAGCTGAAAATCATTGTAGCTCGTGTTCTCGAACAGTTCCCATTGTATGCTACCAATCGCAGAAGGAGGTAGATGTTTTACTTTGCACCGACTGCTTCCATGAAGGAAAATATGTTGCTGGTCATTCGAGCATCGATTTTCTGAGGGTGGACATGACGAAAGAGTATGGTGAACTAGATAGCGAAAATTGGACCGATCAAGAAACTCTATTGCTTTTAGAGGCGATAGAATTGTATAATGAGAATTGGAATGAAATAACAGAACATGTTGGGTCCAAGTCTAAAGCTCAATGCATTATACATTTTCTCCGTCTATCGGTTGAAGATGGTATTCTAGAAAATGTTGATGTGCCTGGCGTTCCTCTCTCATCCAATTCTTCACATGGAAAAGATAACGAGAAGTCACATTCAAATATGAATGGAAATGTAGCAGGATCTTCCTCTCAAGACAATAAAGAGATGCATGATAGACTCCCATTTGCTAATTCTGGGAACCCAGTCATGGCGTTGTTTGAAGTGTAG

Protein sequence

MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERANQSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALFEV

Homology

[Close]

BLAST of Carg00325 vs. NCBI nr
Match: KAG7031668.1 (SWI/SNF complex subunit SWI3C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 947.6 bits (2448), Expect = 4.1e-272
Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0


Query: 1   MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 60
           MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN
Sbjct: 1   MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 60

Query: 61  QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 120
           QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV
Sbjct: 61  QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 120

Query: 121 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 180
           KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN
Sbjct: 121 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 180

Query: 181 PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 240
           PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE
Sbjct: 181 PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 240

Query: 241 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 300
           IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS
Sbjct: 241 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 300

Query: 301 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 360
           CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE
Sbjct: 301 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 360

Query: 361 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 420
           TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH
Sbjct: 361 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 420

Query: 421 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALFEV 466
           GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALFEV
Sbjct: 421 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALFEV 465

[Close]

BLAST of Carg00325 vs. NCBI nr
Match: XP_022940007.1 (SWI/SNF complex subunit SWI3C-like [Cucurbita moschata])

HSP 1 Score: 932.9 bits (2410), Expect = 1.0e-267
Identity = 459/462 (99.35%), Postives = 459/462 (99.35%), Query Frame = 0


Query: 1   MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 60
           MERDNDDSEDPQPT NLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN
Sbjct: 58  MERDNDDSEDPQPTPNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 117

Query: 61  QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 120
           QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV
Sbjct: 118 QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 177

Query: 121 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 180
           KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN
Sbjct: 178 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 237

Query: 181 PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 240
           PEKRVTVSDCQG VN VSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE
Sbjct: 238 PEKRVTVSDCQGLVNCVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 297

Query: 241 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 300
           IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS
Sbjct: 298 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 357

Query: 301 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 360
           CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE
Sbjct: 358 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 417

Query: 361 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 420
           TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH
Sbjct: 418 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 477

Query: 421 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
           GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 519

[Close]

BLAST of Carg00325 vs. NCBI nr
Match: XP_023524497.1 (SWI/SNF complex subunit SWI3C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 925.6 bits (2391), Expect = 1.7e-265
Identity = 454/462 (98.27%), Postives = 457/462 (98.92%), Query Frame = 0


Query: 1   MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 60
           MERDNDDSEDPQPT N SLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMER +
Sbjct: 58  MERDNDDSEDPQPTPNSSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERES 117

Query: 61  QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 120
           QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV
Sbjct: 118 QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 177

Query: 121 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 180
           KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN
Sbjct: 178 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 237

Query: 181 PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 240
           PEKRVTVSDCQG VNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE
Sbjct: 238 PEKRVTVSDCQGLVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 297

Query: 241 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 300
           IHVPSAALKPIDSLIKFDKPKCRLKA DIYSARSCHDDNDDLCDLDNRIRERLAE+HCSS
Sbjct: 298 IHVPSAALKPIDSLIKFDKPKCRLKAADIYSARSCHDDNDDLCDLDNRIRERLAESHCSS 357

Query: 301 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 360
           CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTK+YGELDSENWTDQE
Sbjct: 358 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKDYGELDSENWTDQE 417

Query: 361 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 420
           TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH
Sbjct: 418 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 477

Query: 421 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
           GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 519

[Close]

BLAST of Carg00325 vs. NCBI nr
Match: XP_022980941.1 (SWI/SNF complex subunit SWI3C-like [Cucurbita maxima])

HSP 1 Score: 919.1 bits (2374), Expect = 1.6e-263
Identity = 452/462 (97.84%), Postives = 455/462 (98.48%), Query Frame = 0


Query: 1   MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 60
           MERDNDDSEDPQPT N SLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN
Sbjct: 58  MERDNDDSEDPQPTPNSSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 117

Query: 61  QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 120
           QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEG GVV
Sbjct: 118 QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGRGVV 177

Query: 121 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 180
           KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN
Sbjct: 178 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 237

Query: 181 PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 240
           PEK VTVSDCQG VNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE
Sbjct: 238 PEKSVTVSDCQGLVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 297

Query: 241 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 300
           IHVPSAALKPIDSLIKFDKPKCRLKA DIYS RSCHDDNDDLCDLDNRIRERLAE+HCSS
Sbjct: 298 IHVPSAALKPIDSLIKFDKPKCRLKAADIYSERSCHDDNDDLCDLDNRIRERLAESHCSS 357

Query: 301 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 360
           CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTK+YGELDSENWTDQE
Sbjct: 358 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKDYGELDSENWTDQE 417

Query: 361 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 420
           TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH
Sbjct: 418 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 477

Query: 421 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
           GKDNEKSHSN+NGNVAGSSSQDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 GKDNEKSHSNINGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 519

[Close]

BLAST of Carg00325 vs. NCBI nr
Match: XP_008444192.1 (PREDICTED: SWI/SNF complex subunit SWI3C [Cucumis melo] >TYK30001.1 SWI/SNF complex subunit SWI3C [Cucumis melo var. makuwa])

HSP 1 Score: 847.4 bits (2188), Expect = 5.7e-242
Identity = 422/470 (89.79%), Postives = 440/470 (93.62%), Query Frame = 0


Query: 1   MERD-NDDSEDPQ----PTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVA 60
           MERD NDDSEDPQ    PT N ++QETELLSDDK+RVSEFPQVVKRAVTRPHSSVLAVVA
Sbjct: 58  MERDNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVA 117

Query: 61  MERANQ---SKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPS 120
           MER NQ   SK + GN LILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPP 
Sbjct: 118 MERTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPP 177

Query: 121 IMEGCGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 180
           IMEG GVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF
Sbjct: 178 IMEGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 237

Query: 181 VVAKYMENPEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSY 240
           VVAKYMENPEKRVTVSDC+G V+GVSN+DLTRIVRFLDHWGIINYCAPTPSCEPWN +SY
Sbjct: 238 VVAKYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSY 297

Query: 241 LREDMNGEIHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRER 300
           LREDMNGEIHVPSAALKPIDSL+KFDKPKCRLKA D+YSA  C DD D LCDLDNRIRER
Sbjct: 298 LREDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRER 357

Query: 301 LAENHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELD 360
           LAENHCSSCSR+VP+  YQSQKEVDVLLC+DCFHEGKYVAGHSSIDFLRVDM K+YGELD
Sbjct: 358 LAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELD 417

Query: 361 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGV 420
           SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDG+LENVDVPGV
Sbjct: 418 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 477

Query: 421 PLSSNSSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
            LSSN+SHG D+EKS SNMNGNVAGSS+QDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 SLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMAL 527

[Close]

BLAST of Carg00325 vs. ExPASy Swiss-Prot
Match: Q9XI07 (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 8.0e-146
Identity = 265/443 (59.82%), Postives = 327/443 (73.81%), Query Frame = 0


Query: 23  ELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERANQSKVLSGNPLI--LENVSYGQL 82
           E++ D   R+S+FP VVKR V RPH+SV+AVVA ERA       G   +  LEN+S+GQL
Sbjct: 72  EVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRGQGSLPALENISFGQL 131

Query: 83  QALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVVKRFGSRVHVVPMHSDWFSPA 142
           QALS +PADS   LD ER +  ++AYVI+PP IM+G GVVKRFG  VHV+PMHSDWF+P 
Sbjct: 132 QALSTVPADS---LDLERSDGSSSAYVISPPPIMDGEGVVKRFGDLVHVLPMHSDWFAPN 191

Query: 143 TVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVSDCQGFVNGVSND 202
           TV RLERQVVP FFSGK P+ TPE YME RN +V+KY+ENPEK +T+SDCQG V+GV  +
Sbjct: 192 TVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIE 251

Query: 203 DLTRIVRFLDHWGIINYCAPTPSCE-PWNRSSYLREDMNGEIHVPSAALKPIDSLIKFDK 262
           D  R+ RFLDHWGIINYCA   S   P    S +RED NGE++VPSAAL  IDSLIKFDK
Sbjct: 252 DFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFDK 311

Query: 263 PKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSSCSRTVPIVCYQSQKEVDVL 322
           P CR K  ++YS+    D   D  DLD RIRE L ++HC+ CSR +P V +QSQK+ D+L
Sbjct: 312 PNCRHKGGEVYSSLPSLD--GDSPDLDIRIREHLCDSHCNHCSRPLPTVYFQSQKKGDIL 371

Query: 323 LCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQETLLLLEAIELYNENWNEIT 382
           LC DCFH G++V GHS +DF+RVD  K YG+ D +NWTDQETLLLLEA+ELYNENW +I 
Sbjct: 372 LCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIA 431

Query: 383 EHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSHGKDNEKSHSNMNGNVAGSS 442
           +HVGSKSKAQCI+HFLRL VEDG+L+NV+V GV  + N ++G D++ + S  NG++ G S
Sbjct: 432 DHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHKGTDS--NGDLPGYS 491

Query: 443 SQDNKEMHDRLPFANSGNPVMAL 463
            Q   +   +LPF  S NPVMAL
Sbjct: 492 EQ-GSDTEIKLPFVKSPNPVMAL 506

[Close]

BLAST of Carg00325 vs. ExPASy Swiss-Prot
Match: Q53KK6 (SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3C PE=1 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 9.2e-118
Identity = 239/465 (51.40%), Postives = 305/465 (65.59%), Query Frame = 0


Query: 8   SEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMER---ANQSKV 67
           +EDP     L L+E E+L   +  VS FP   +R V RPH SVLAV+A ER   A +   
Sbjct: 70  AEDPV----LDLREAEVLPSAE-PVSAFPVATRRVVNRPHPSVLAVIAAERSACAGEGSA 129

Query: 68  LSGNPLILENVSYGQLQALSAMPADSPAL-LDQERVEAGNAAYVITPPSIMEGCGVVKRF 127
                 +LEN+SYGQ Q LS +  D  +L  D ++     + YV TPP++MEG GV K+F
Sbjct: 130 AVAAAPVLENISYGQQQVLSGVLPDHASLATDTDK----PSTYVCTPPNLMEGHGVTKQF 189

Query: 128 GSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEK 187
             R+HVVP HSDWFSP  VHRLERQVVP FFSGK P  TPEKYM +RN V+AKY+ENP K
Sbjct: 190 QGRLHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSK 249

Query: 188 RVTVSDCQGFV-NGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNR--SSYLREDMNGE 247
           R+  ++CQG V N     DL+RIVRFLD WGIINY A + S     R  +S LRE+  GE
Sbjct: 250 RLAFAECQGLVANTAELYDLSRIVRFLDTWGIINYLA-SGSVHRGLRMATSLLREEPTGE 309

Query: 248 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARS---CHDDNDDLCDLDNRIRERLAENH 307
           + + +A LK ID LI FD+PKC L+A DI S  S     D +  L +LD +IRERL+E+ 
Sbjct: 310 LQLLTAPLKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRERLSESS 369

Query: 308 CSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWT 367
           CS C + +  + YQS KE D+ LC+DCFH+ +Y+ GHSS+DF R+D   +  E D ++WT
Sbjct: 370 CSYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDSWT 429

Query: 368 DQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSN 427
           DQETLLLLE IE YN+NWN I EHVG+KSKAQCI HF+RL VEDG+LEN++VP    +S 
Sbjct: 430 DQETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPD---ASV 489

Query: 428 SSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
               + N   H + NG+ +G+  Q      ++LPF NS NPVM+L
Sbjct: 490 PFRAETNGYPHLDCNGSTSGNLPQ-KIPPDNQLPFINSSNPVMSL 520

[Close]

BLAST of Carg00325 vs. ExPASy Swiss-Prot
Match: Q8VY05 (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-46
Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 0


Query: 125 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 184
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 185 VTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHVP 244
           + + D      G  ++    ++ FLD+WG+IN+  P P  +  + +S   +D+  +  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASD-HDDLGDKESL- 261

Query: 245 SAALKPIDSLIKF--DKPKCRLKAVDIYSARSCHDD-NDDLCDLDNRIRER--LAENHCS 304
                 ++SL +F  D+    L     ++A++       D    D  +++     E HC+
Sbjct: 262 ------LNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCN 321

Query: 305 SCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQ 364
           SCS       Y   K+ D  LCT+CF+ GK+ +  SS DF+ ++  +  G + S  WTDQ
Sbjct: 322 SCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQ 381

Query: 365 ETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSS 424
           ETLLLLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D    P+S +++
Sbjct: 382 ETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISKDTT 441

Query: 425 H---GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGN 458
                KD+     +           D  E    +P    GN
Sbjct: 442 DLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGN 470

[Close]

BLAST of Carg00325 vs. ExPASy Swiss-Prot
Match: O14470 (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr2 PE=1 SV=3)

HSP 1 Score: 150.6 bits (379), Expect = 4.4e-35
Identity = 87/292 (29.79%), Postives = 152/292 (52.05%), Query Frame = 0


Query: 129 VVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVS 188
           +VP ++ WF  + +H +ER+  P FF+GK P +TP  Y + R+F++  Y   P + +TV+
Sbjct: 19  IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVT 78

Query: 189 DCQGFVNGVSNDDLTRIVR---FLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHVPS 248
            C+  + G    D+  I+R   FL+ WG+INY       +P  R ++    ++G +   S
Sbjct: 79  ACRRNLVG----DVCAIIRVHAFLEQWGLINY-----QIDPETRPAFRLPPISGHVQAIS 138

Query: 249 ---------AALKPIDSLIKFDKPKCRLKAVDIYSARSCH-------DDNDDLCDLDNRI 308
                     A  P  S +     +  +K  + + + S +        + D+  D   R+
Sbjct: 139 NTPIVTQEMLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRV 198

Query: 309 RERLAENHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYG 368
                +  C +C        Y + K     +C +C+ +G++ +  +S DFL +D   ++ 
Sbjct: 199 -----DKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAI-DFN 258

Query: 369 ELDSENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVED 402
             + + W++QETLLLLEAIE Y ++WN+I  HVGS++K QC+IHFL++ +ED
Sbjct: 259 HDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIED 295

[Close]

BLAST of Carg00325 vs. ExPASy Swiss-Prot
Match: P43609 (Chromatin structure-remodeling complex protein RSC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RSC8 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.6e-31
Identity = 89/320 (27.81%), Postives = 154/320 (48.12%), Query Frame = 0


Query: 129 VVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVS 188
           ++P  + WF  + +H +E++  P FF+     +TP+ Y + RNF++  Y  +P + +T++
Sbjct: 81  IIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTIT 140

Query: 189 DCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHV---PS 248
             +  V  +    + +I  FL+ WG+INY       +P  + S +     G   V     
Sbjct: 141 AVRRNV-AMDVASIVKIHAFLEKWGLINY-----QIDPRTKPSLIGPSFTGHFQVVLDTP 200

Query: 249 AALKPI--DSLIKFD-------KPKCRLK-AVDIYSARSCHDDNDDLCDLDNRIRERLAE 308
             LKP   +++IK +       +P+ + +  V++   ++ +D   D   L +  R     
Sbjct: 201 QGLKPFLPENVIKQEVEGGDGAEPQVKKEFPVNLTIKKNVYDSAQDFNALQDESRNSRQI 260

Query: 309 NH---CSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELD 368
           +    C +C      V Y + +  D  LC+ CF EG + A   S DF+R++     G   
Sbjct: 261 HKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLE---NNGNSV 320

Query: 369 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQ-CIIHFLRLSVEDGILENVDVPG 428
            +NW+DQE LLLLE IE+Y + W +I +HVG   + + CI  FL L +ED  +   +V G
Sbjct: 321 KKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYIR--EVVG 380

Query: 429 VPLSSNSSHGKDNEKSHSNM 432
             L+      +D   S S +
Sbjct: 381 STLNGKGGDSRDGSVSGSKL 389

[Close]

BLAST of Carg00325 vs. ExPASy TrEMBL
Match: A0A6J1FIF8 (SWI/SNF complex subunit SWI3C-like OS=Cucurbita moschata OX=3662 GN=LOC111445771 PE=4 SV=1)

HSP 1 Score: 932.9 bits (2410), Expect = 5.0e-268
Identity = 459/462 (99.35%), Postives = 459/462 (99.35%), Query Frame = 0


Query: 1   MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 60
           MERDNDDSEDPQPT NLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN
Sbjct: 58  MERDNDDSEDPQPTPNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 117

Query: 61  QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 120
           QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV
Sbjct: 118 QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 177

Query: 121 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 180
           KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN
Sbjct: 178 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 237

Query: 181 PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 240
           PEKRVTVSDCQG VN VSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE
Sbjct: 238 PEKRVTVSDCQGLVNCVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 297

Query: 241 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 300
           IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS
Sbjct: 298 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 357

Query: 301 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 360
           CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE
Sbjct: 358 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 417

Query: 361 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 420
           TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH
Sbjct: 418 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 477

Query: 421 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
           GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 519

[Close]

BLAST of Carg00325 vs. ExPASy TrEMBL
Match: A0A6J1IV14 (SWI/SNF complex subunit SWI3C-like OS=Cucurbita maxima OX=3661 GN=LOC111480241 PE=4 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 7.5e-264
Identity = 452/462 (97.84%), Postives = 455/462 (98.48%), Query Frame = 0


Query: 1   MERDNDDSEDPQPTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 60
           MERDNDDSEDPQPT N SLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN
Sbjct: 58  MERDNDDSEDPQPTPNSSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERAN 117

Query: 61  QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVV 120
           QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEG GVV
Sbjct: 118 QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGRGVV 177

Query: 121 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 180
           KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN
Sbjct: 178 KRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMEN 237

Query: 181 PEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 240
           PEK VTVSDCQG VNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE
Sbjct: 238 PEKSVTVSDCQGLVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGE 297

Query: 241 IHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSS 300
           IHVPSAALKPIDSLIKFDKPKCRLKA DIYS RSCHDDNDDLCDLDNRIRERLAE+HCSS
Sbjct: 298 IHVPSAALKPIDSLIKFDKPKCRLKAADIYSERSCHDDNDDLCDLDNRIRERLAESHCSS 357

Query: 301 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQE 360
           CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTK+YGELDSENWTDQE
Sbjct: 358 CSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKDYGELDSENWTDQE 417

Query: 361 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 420
           TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH
Sbjct: 418 TLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSH 477

Query: 421 GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
           GKDNEKSHSN+NGNVAGSSSQDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 GKDNEKSHSNINGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 519

[Close]

BLAST of Carg00325 vs. ExPASy TrEMBL
Match: A0A5D3E339 (SWI/SNF complex subunit SWI3C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00020 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.8e-242
Identity = 422/470 (89.79%), Postives = 440/470 (93.62%), Query Frame = 0


Query: 1   MERD-NDDSEDPQ----PTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVA 60
           MERD NDDSEDPQ    PT N ++QETELLSDDK+RVSEFPQVVKRAVTRPHSSVLAVVA
Sbjct: 58  MERDNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVA 117

Query: 61  MERANQ---SKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPS 120
           MER NQ   SK + GN LILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPP 
Sbjct: 118 MERTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPP 177

Query: 121 IMEGCGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 180
           IMEG GVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF
Sbjct: 178 IMEGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 237

Query: 181 VVAKYMENPEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSY 240
           VVAKYMENPEKRVTVSDC+G V+GVSN+DLTRIVRFLDHWGIINYCAPTPSCEPWN +SY
Sbjct: 238 VVAKYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSY 297

Query: 241 LREDMNGEIHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRER 300
           LREDMNGEIHVPSAALKPIDSL+KFDKPKCRLKA D+YSA  C DD D LCDLDNRIRER
Sbjct: 298 LREDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRER 357

Query: 301 LAENHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELD 360
           LAENHCSSCSR+VP+  YQSQKEVDVLLC+DCFHEGKYVAGHSSIDFLRVDM K+YGELD
Sbjct: 358 LAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELD 417

Query: 361 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGV 420
           SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDG+LENVDVPGV
Sbjct: 418 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 477

Query: 421 PLSSNSSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
            LSSN+SHG D+EKS SNMNGNVAGSS+QDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 SLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMAL 527

[Close]

BLAST of Carg00325 vs. ExPASy TrEMBL
Match: A0A1S3B9W1 (SWI/SNF complex subunit SWI3C OS=Cucumis melo OX=3656 GN=LOC103487606 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.8e-242
Identity = 422/470 (89.79%), Postives = 440/470 (93.62%), Query Frame = 0


Query: 1   MERD-NDDSEDPQ----PTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVA 60
           MERD NDDSEDPQ    PT N ++QETELLSDDK+RVSEFPQVVKRAVTRPHSSVLAVVA
Sbjct: 58  MERDNNDDSEDPQIGLHPTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVA 117

Query: 61  MERANQ---SKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPS 120
           MER NQ   SK + GN LILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPP 
Sbjct: 118 MERTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPP 177

Query: 121 IMEGCGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 180
           IMEG GVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF
Sbjct: 178 IMEGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 237

Query: 181 VVAKYMENPEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSY 240
           VVAKYMENPEKRVTVSDC+G V+GVSN+DLTRIVRFLDHWGIINYCAPTPSCEPWN +SY
Sbjct: 238 VVAKYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSY 297

Query: 241 LREDMNGEIHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRER 300
           LREDMNGEIHVPSAALKPIDSL+KFDKPKCRLKA D+YSA  C DD D LCDLDNRIRER
Sbjct: 298 LREDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRER 357

Query: 301 LAENHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELD 360
           LAENHCSSCSR+VP+  YQSQKEVDVLLC+DCFHEGKYVAGHSSIDFLRVDM K+YGELD
Sbjct: 358 LAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELD 417

Query: 361 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGV 420
           SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDG+LENVDVPGV
Sbjct: 418 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 477

Query: 421 PLSSNSSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
            LSSN+SHG D+EKS SNMNGNVAGSS+QDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 SLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMAL 527

[Close]

BLAST of Carg00325 vs. ExPASy TrEMBL
Match: A0A0A0L361 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361800 PE=4 SV=1)

HSP 1 Score: 844.7 bits (2181), Expect = 1.8e-241
Identity = 421/470 (89.57%), Postives = 438/470 (93.19%), Query Frame = 0


Query: 1   MERD-NDDSEDPQ----PTRNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVA 60
           MERD NDDSEDPQ    PT N ++QE ELLSDDK RVSEFPQVVKRAVTRPHSSVLAVVA
Sbjct: 58  MERDNNDDSEDPQIGLHPTPNSTIQEPELLSDDKFRVSEFPQVVKRAVTRPHSSVLAVVA 117

Query: 61  MERANQ---SKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPS 120
           MER NQ   SK + GN LILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPP 
Sbjct: 118 MERTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPP 177

Query: 121 IMEGCGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 180
           IMEG GVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF
Sbjct: 178 IMEGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNF 237

Query: 181 VVAKYMENPEKRVTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSY 240
           VVAKYMENPEKRVTVSDCQG V+GVSN+DLTRIVRFLDHWGIINYCAPTPSCEPWN +SY
Sbjct: 238 VVAKYMENPEKRVTVSDCQGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSY 297

Query: 241 LREDMNGEIHVPSAALKPIDSLIKFDKPKCRLKAVDIYSARSCHDDNDDLCDLDNRIRER 300
           LREDMNGEIHVPSAALKPIDSL+KFDKPKCRLKA D+YSA  C DD D LCDLDNRIRER
Sbjct: 298 LREDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVYSALPCRDDIDGLCDLDNRIRER 357

Query: 301 LAENHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELD 360
           LAENHCSSCSR+VPI  YQSQKEVDVLLC+DCFHEGKYVAGHSS+DFLRVDM K+YGELD
Sbjct: 358 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSVDFLRVDMAKDYGELD 417

Query: 361 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGV 420
           SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDG+LENVDVPGV
Sbjct: 418 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 477

Query: 421 PLSSNSSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMAL 463
            LSS++SHG D+EKS SNMNGN+AGSSSQDNKEMHDRLPFANSGNPVMAL
Sbjct: 478 SLSSSASHGGDSEKSRSNMNGNIAGSSSQDNKEMHDRLPFANSGNPVMAL 527

[Close]

BLAST of Carg00325 vs. TAIR 10
Match: AT1G21700.1 (SWITCH/sucrose nonfermenting 3C )

HSP 1 Score: 518.5 bits (1334), Expect = 5.7e-147
Identity = 265/443 (59.82%), Postives = 327/443 (73.81%), Query Frame = 0


Query: 23  ELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERANQSKVLSGNPLI--LENVSYGQL 82
           E++ D   R+S+FP VVKR V RPH+SV+AVVA ERA       G   +  LEN+S+GQL
Sbjct: 72  EVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRGQGSLPALENISFGQL 131

Query: 83  QALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGCGVVKRFGSRVHVVPMHSDWFSPA 142
           QALS +PADS   LD ER +  ++AYVI+PP IM+G GVVKRFG  VHV+PMHSDWF+P 
Sbjct: 132 QALSTVPADS---LDLERSDGSSSAYVISPPPIMDGEGVVKRFGDLVHVLPMHSDWFAPN 191

Query: 143 TVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKRVTVSDCQGFVNGVSND 202
           TV RLERQVVP FFSGK P+ TPE YME RN +V+KY+ENPEK +T+SDCQG V+GV  +
Sbjct: 192 TVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIE 251

Query: 203 DLTRIVRFLDHWGIINYCAPTPSCE-PWNRSSYLREDMNGEIHVPSAALKPIDSLIKFDK 262
           D  R+ RFLDHWGIINYCA   S   P    S +RED NGE++VPSAAL  IDSLIKFDK
Sbjct: 252 DFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFDK 311

Query: 263 PKCRLKAVDIYSARSCHDDNDDLCDLDNRIRERLAENHCSSCSRTVPIVCYQSQKEVDVL 322
           P CR K  ++YS+    D   D  DLD RIRE L ++HC+ CSR +P V +QSQK+ D+L
Sbjct: 312 PNCRHKGGEVYSSLPSLD--GDSPDLDIRIREHLCDSHCNHCSRPLPTVYFQSQKKGDIL 371

Query: 323 LCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQETLLLLEAIELYNENWNEIT 382
           LC DCFH G++V GHS +DF+RVD  K YG+ D +NWTDQETLLLLEA+ELYNENW +I 
Sbjct: 372 LCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIA 431

Query: 383 EHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSHGKDNEKSHSNMNGNVAGSS 442
           +HVGSKSKAQCI+HFLRL VEDG+L+NV+V GV  + N ++G D++ + S  NG++ G S
Sbjct: 432 DHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHKGTDS--NGDLPGYS 491

Query: 443 SQDNKEMHDRLPFANSGNPVMAL 463
            Q   +   +LPF  S NPVMAL
Sbjct: 492 EQ-GSDTEIKLPFVKSPNPVMAL 506

[Close]

BLAST of Carg00325 vs. TAIR 10
Match: AT4G34430.1 (DNA-binding family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-47
Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 0


Query: 125 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 184
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 185 VTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHVP 244
           + + D      G  ++    ++ FLD+WG+IN+  P P  +  + +S   +D+  +  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASD-HDDLGDKESL- 261

Query: 245 SAALKPIDSLIKF--DKPKCRLKAVDIYSARSCHDD-NDDLCDLDNRIRER--LAENHCS 304
                 ++SL +F  D+    L     ++A++       D    D  +++     E HC+
Sbjct: 262 ------LNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCN 321

Query: 305 SCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQ 364
           SCS       Y   K+ D  LCT+CF+ GK+ +  SS DF+ ++  +  G + S  WTDQ
Sbjct: 322 SCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQ 381

Query: 365 ETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSS 424
           ETLLLLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D    P+S +++
Sbjct: 382 ETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISKDTT 441

Query: 425 H---GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGN 458
                KD+     +           D  E    +P    GN
Sbjct: 442 DLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGN 470

[Close]

BLAST of Carg00325 vs. TAIR 10
Match: AT4G34430.4 (DNA-binding family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-47
Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 0


Query: 125 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 184
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 185 VTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHVP 244
           + + D      G  ++    ++ FLD+WG+IN+  P P  +  + +S   +D+  +  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASD-HDDLGDKESL- 261

Query: 245 SAALKPIDSLIKF--DKPKCRLKAVDIYSARSCHDD-NDDLCDLDNRIRER--LAENHCS 304
                 ++SL +F  D+    L     ++A++       D    D  +++     E HC+
Sbjct: 262 ------LNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCN 321

Query: 305 SCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQ 364
           SCS       Y   K+ D  LCT+CF+ GK+ +  SS DF+ ++  +  G + S  WTDQ
Sbjct: 322 SCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQ 381

Query: 365 ETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSS 424
           ETLLLLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D    P+S +++
Sbjct: 382 ETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISKDTT 441

Query: 425 H---GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGN 458
                KD+     +           D  E    +P    GN
Sbjct: 442 DLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGN 470

[Close]

BLAST of Carg00325 vs. TAIR 10
Match: AT4G34430.3 (DNA-binding family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-47
Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 0


Query: 125 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 184
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 185 VTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHVP 244
           + + D      G  ++    ++ FLD+WG+IN+  P P  +  + +S   +D+  +  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASD-HDDLGDKESL- 261

Query: 245 SAALKPIDSLIKF--DKPKCRLKAVDIYSARSCHDD-NDDLCDLDNRIRER--LAENHCS 304
                 ++SL +F  D+    L     ++A++       D    D  +++     E HC+
Sbjct: 262 ------LNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCN 321

Query: 305 SCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQ 364
           SCS       Y   K+ D  LCT+CF+ GK+ +  SS DF+ ++  +  G + S  WTDQ
Sbjct: 322 SCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQ 381

Query: 365 ETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSS 424
           ETLLLLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D    P+S +++
Sbjct: 382 ETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISKDTT 441

Query: 425 H---GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGN 458
                KD+     +           D  E    +P    GN
Sbjct: 442 DLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGN 470

[Close]

BLAST of Carg00325 vs. TAIR 10
Match: AT4G34430.2 (DNA-binding family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-47
Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 0


Query: 125 SRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEKR 184
           S VHVVP H  WFS   +H LE + +P FF+GKL  RT E Y EIRN+++ K+  NP  +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201

Query: 185 VTVSDCQGFVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHVP 244
           + + D      G  ++    ++ FLD+WG+IN+  P P  +  + +S   +D+  +  + 
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTDTGSTASD-HDDLGDKESL- 261

Query: 245 SAALKPIDSLIKF--DKPKCRLKAVDIYSARSCHDD-NDDLCDLDNRIRER--LAENHCS 304
                 ++SL +F  D+    L     ++A++       D    D  +++     E HC+
Sbjct: 262 ------LNSLYRFQVDEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCN 321

Query: 305 SCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDSENWTDQ 364
           SCS       Y   K+ D  LCT+CF+ GK+ +  SS DF+ ++  +  G + S  WTDQ
Sbjct: 322 SCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKWTDQ 381

Query: 365 ETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSS 424
           ETLLLLEA+E++ ENWNEI EHV +K+KAQC++HFL++ +ED  L+ +D    P+S +++
Sbjct: 382 ETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISKDTT 441

Query: 425 H---GKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGN 458
                KD+     +           D  E    +P    GN
Sbjct: 442 DLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGN 470

The following BLAST results are available for this feature:

BLAST of Carg00325 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031668.1	4.1e-272	100.00	SWI/SNF complex subunit SWI3C [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022940007.1	1.0e-267	99.35	SWI/SNF complex subunit SWI3C-like [Cucurbita moschata]	[more]
XP_023524497.1	1.7e-265	98.27	SWI/SNF complex subunit SWI3C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022980941.1	1.6e-263	97.84	SWI/SNF complex subunit SWI3C-like [Cucurbita maxima]	[more]
XP_008444192.1	5.7e-242	89.79	PREDICTED: SWI/SNF complex subunit SWI3C [Cucumis melo] >TYK30001.1 SWI/SNF comp...	[more]

BLAST of Carg00325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI07	8.0e-146	59.82	SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1	[more]
Q53KK6	9.2e-118	51.40	SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8VY05	2.5e-46	34.02	SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3	[more]
O14470	4.4e-35	29.79	SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
P43609	8.6e-31	27.81	Chromatin structure-remodeling complex protein RSC8 OS=Saccharomyces cerevisiae ...	[more]

BLAST of Carg00325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIF8	5.0e-268	99.35	SWI/SNF complex subunit SWI3C-like OS=Cucurbita moschata OX=3662 GN=LOC111445771...	[more]
A0A6J1IV14	7.5e-264	97.84	SWI/SNF complex subunit SWI3C-like OS=Cucurbita maxima OX=3661 GN=LOC111480241 P...	[more]
A0A5D3E339	2.8e-242	89.79	SWI/SNF complex subunit SWI3C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3B9W1	2.8e-242	89.79	SWI/SNF complex subunit SWI3C OS=Cucumis melo OX=3656 GN=LOC103487606 PE=4 SV=1	[more]
A0A0A0L361	1.8e-241	89.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361800 PE=4 SV=1	[more]

BLAST of Carg00325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21700.1	5.7e-147	59.82	SWITCH/sucrose nonfermenting 3C	[more]
AT4G34430.1	1.8e-47	34.02	DNA-binding family protein	[more]
AT4G34430.4	1.8e-47	34.02	DNA-binding family protein	[more]
AT4G34430.3	1.8e-47	34.02	DNA-binding family protein	[more]
AT4G34430.2	1.8e-47	34.02	DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 352..400 e-value: 9.8E-9 score: 45.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 348..398 score: 6.957235
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 355..397 e-value: 1.70012E-8 score: 48.3406
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 354..396 e-value: 9.5E-11 score: 41.7
None	No IPR available	GENE3D	1.10.10.60		coord: 352..402 e-value: 3.3E-16 score: 60.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..453
None	No IPR available	PANTHER	PTHR12802:SF61	SWI/SNF COMPLEX SUBUNIT SWI3C	coord: 15..462
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 15..462
IPR007526	SWIRM domain	PFAM	PF04433	SWIRM	coord: 131..217 e-value: 2.5E-23 score: 82.2
IPR007526	SWIRM domain	PROSITE	PS50934	SWIRM	coord: 128..226 score: 19.558418
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 134..221 e-value: 1.3E-26 score: 94.3
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 351..402 score: 19.751963
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 353..403
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 127..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00325-RA	Carg00325-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0005515	protein binding