Carg00309 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg00309
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCir_N domain-containing protein
LocationCarg_Chr04: 6533961 .. 6537725 (-)
RNA-Seq ExpressionCarg00309
SyntenyCarg00309
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTGAGGAAGGAGGGATACGGCTAAGCAAGAGGTTCTCCGACAAATCTGGATCCGGTGAAGTTGATTACAAAACCAAGGCTGGCACCGCTTGGAGCCATTCTTATCTCAACCAGAAGCCCTGGCATCCTCTCTCGTACCCTAATCAACGCCGGAAATGGATCGCCGAGCAGACTCACTCTCAGCGAGAAAAGCGCGCCGAGGAAGTTGCTCGCGAGGTCAATTATACGCTTCAGTTCTGTTGTTTCGCACTCGCTAGATCTTTCTTCTCAATGTTTTTTTTTTTTTTTTTTTTCCTGTTTGCAGTATGCTCAAGAGCAGGAGTTCTTTCGCCAGGCTGCTCTTGTCTCCAAGAAAGAGAAGGAAAAGGTCTTACCTAGTTTTTTTTTTCGCTTACTGATGTTTACACCTTGATTGAAGCAAATTTCTTATTTAGCACTTTCGTGAAGCTGTCTAGGTTAACGATACATAGCAATCTTATAGTTTTAGTGATTGGTTAATGTTTGTGTCTTATCTCATCATCATCTTTTCATTGAGTTCTGTTTCATTCTTTTTATTTCTGGTTGCTTATGTTGCAAATTGGAGAAGGTGTTCTATGGCTATTGGCTAGGATTTTGTGAGAGTGGCTCTCTCATCTTGTAAATTTTCTACGTCTATGTTTTCTGAAAAAAAGTCCTGCTGCTGACAGTCGCCATGCCGAACTCAATCTTAATGATGATGACATAGCTGAAATTGTTTCTCCAACGTTACTCTTCCATCCGGACGAAAGATCCTGTAGTTTCTTTACGAGAATAGATAGTGGACTGTAGTTTTCCTTCCATTTGTTATTTAACGAGTTGCTATTAATTGTTTTTCTGCTTGTTGTTTATGGAGAATTTTGGCCATTGTTGCTGAAATCTGTGTTTGGTGGTTAGTTGGAGATGATGAAAGCGGTTAGTTTTATGTACGTACGACCACCTGGTTACAATGCTGAAAGTGCAAAAGCTGCAGAGATCGCTGATGATAGGAAGAATCAAGAGGGTGATAGCTCCTCTCAGAATCTGCCCAAGGATGGCTCTGTGAATGAAAGGTACTTCATCTTTATCTTGCACAATTATGTTCTTATTGTTCAGATGGAAATGCGAAGGAATGTTCAATGATGAGGATGATTTGAAGTTTTTTACCCTTTAAAGGCAGTAAAATTTCTCTTCTTCTTGTAGGCCACCAGAATCGTCAGGCACAGTCGGTAGGGACCATGGCGACAAGAAAAAACCAAGGCCAAAAGATGTTTTCGGGCGTGCTTTGCCCACCGAAGAAGAATTTGAAGTCTTAAAAAATGCCCCTCGGTAAGTTGCTAGCATGCTGAGATTGAATGAATATGAGTACCACTTTGATTTTGTATGTTGCAAACTCTAGCAGTTAGCATATAGGGAATAAGTGACTATGGCTCATTAATTTTGCTCAAGGTGGAGAAAATGCTATTAATTATCTATCACCCTTTGACTTAATAGACTTCAAGAACATCTCTAGTTAAAACTTCAGTCGATTTTATGCACCACCAATTTCTTGATGTTATGATTACATGGATTCGTTGTCCCTCTGGATCGATGTCTGCTTGTCCTTTTGTCCACTTATACTTCAAAACATATTGGAGGGTCCTCATCCATAAAGAATCTGATAATGCATACCATATGCAAAGAGTTTAAAAGGTAGTATACGAAATGAGCTGCCAAATAGCGAATAAACAATCTCGTACTGTGCGGTATTATTTGGATAATTTCACAGTTAATTTTGGGTTATGTAATCTAAATGTTACTCATATTTTGTTTGAGATTTATGGTTTCTTTCCGTCTGTTTCCAGGATGGACACAGGTGTTTTTGCGAGAGTAAAACCATTTGGGGTAGAAGTACGCAATGTGAAATGTGTTAGATGTGGGATCTTTGGCCATCAAAGTGGTGATCGTGAATGTCCGTTGAAGGATGCTATAATGCCAAATGAAGAAAATCGATTGAAAAGAGATGACCCTTTATCTACAATACTTGCGCATGCAGAGAGCAGTGAGGCTAGTATTTTGATTTATTCTTCGTTTGAAACTTACATTGCAGTATTACCTTGTAACAGCCTAAGTCCACCGCTAGCAGATATCGTTTTTTTTTTACTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTGTTTAAACGTGTCTGCTATGGAGAGGTTTCTGCACCCTTATAAAGAATGCCTCGTTCTCGTCTCCAATTGAACAGCCCAAATCCACCGCTAGTAGATATTGTCCTCTTTGGACTTCCCCTTTCGGGCTTCCCCCAAAGGTTTTTAAAACACGTTTGCTAGGGAGATGTTTCCATACCTTTATAAAGAATGTTTAATTCTCCTTTCCAATCGACGTGGGATCTCACATACCTAGTCTGATAAGTGCTTTAGTGTGTATACTGTTTTCAATATTCTGACATTAATGTGCGTCATTCTTTACTCCATGAACTGTTGGTGACTTAGCTGTTGCTCTACCATTGATTGGTAACCCGAATCGAGCGTGTTAAATATTTGTTCTCATGTGTTTCCTTTTCCATGTTATCTACAGCCTCTGAAGTGGGAGTTGAAGCAGAAACCAGGAATCAGTCCACCCCGTGGAGGTTTTAATCCCGACGACCCGAACCAGCAAATAGTTGCCGAGGACATATTTGATGAGTACGGAGGTCAATGCTTTTTCCACCACGACAATCTTCCGATTCTGATTTCTCTCTTTTAGCTGGTAACTGATTATTTCCCATCTATAATCTGTAGGCTTTCTCAGCAGTGGCGGTATTGTCCCGGAATTGCTGTCCAATTTTTCAAGCAAACCCAAGAAAAAGAAGTCTTCAAAAGAAAGTTCACGGAAAAAAGCAAAGAATCAAGAAGACGATGAGAGAATATCAAAGAAGAAAAGTAAATCTAAAAGAAAGAAACAAATCAGTAGTGAATCAAGTCCAGAAACCTCAGAGTCTGATAGGCGAAATAGAAGGAACAAGCACAAGACTTCCTATTCTTCTGATGATTTCGACTCGAAAACGCAACTTGGGACTAAAAAGCATAGAAGGAAACATCTAAATACTTCTGATGTTTCTAACTTTGAGCGGCCTCATATTACTGATCGATATTGCCCCGAACGAAGCCCTTCTGATATTTCAGACTCTGGTAGGCAGGATGAACGGAGGAAAGGCAAGGGTTCTGAATCAGAACACAGATCAGGCAGAAAAAACCAATCATACTCTTCTGAAGAGTCCGAATTCGAGACGCATCGACAAAGTGATAAAAGCAGATCCAAACACTCCTCGTCGAAAGATCATCGCCCAGATAGTCATCATTCAAGTAGCAAGATGAGACGTAGGAGGTCTTATTCGTCTGATGATTCAGAAACGAACAGGCGTCGTAGAAGTAAAGGCCAAAAGCACAATTACTCATCAGATGATTCTGAGCAAGAGAAACATGCTAGAGATAAGAAGAGAAGACGTTAGTGTATTCGTCATCAAAATTTGACGTTAAAACGATCGTTGGAGCATAGTATTTCAAAGTAAAACGACGTTGCCGATAGCTGGTAATGCCCGATATCTATTGATATAAGATGTTCTATTTGATTATTACACTTGGGAATATGATTAAAAAAAATAATACGATTGGTGTTTTGAATGCCTCCTAGTCCAAAATTATACACAAGTAATTATTTGATTGAGATATGATAAATTTGAGTCACTTTAAAAGTAAATTTGATTCATTGATTGAGGAAATA

mRNA sequence

ATGGATGGTGAGGAAGGAGGGATACGGCTAAGCAAGAGGTTCTCCGACAAATCTGGATCCGGTGAAGTTGATTACAAAACCAAGGCTGGCACCGCTTGGAGCCATTCTTATCTCAACCAGAAGCCCTGGCATCCTCTCTCGTACCCTAATCAACGCCGGAAATGGATCGCCGAGCAGACTCACTCTCAGCGAGAAAAGCGCGCCGAGGAAGTTGCTCGCGAGTATGCTCAAGAGCAGGAGTTCTTTCGCCAGGCTGCTCTTGTCTCCAAGAAAGAGAAGGAAAAGTTGGAGATGATGAAAGCGGTTAGTTTTATGTACGTACGACCACCTGGTTACAATGCTGAAAGTGCAAAAGCTGCAGAGATCGCTGATGATAGGAAGAATCAAGAGGGTGATAGCTCCTCTCAGAATCTGCCCAAGGATGGCTCTGTGAATGAAAGGCCACCAGAATCGTCAGGCACAGTCGGTAGGGACCATGGCGACAAGAAAAAACCAAGGCCAAAAGATGTTTTCGGGCGTGCTTTGCCCACCGAAGAAGAATTTGAAGTCTTAAAAAATGCCCCTCGGATGGACACAGGTGTTTTTGCGAGAGTAAAACCATTTGGGGTAGAAGTACGCAATGTGAAATGTGTTAGATGTGGGATCTTTGGCCATCAAAGTGGTGATCGTGAATGTCCGTTGAAGGATGCTATAATGCCAAATGAAGAAAATCGATTGAAAAGAGATGACCCTTTATCTACAATACTTGCGCATGCAGAGAGCAGTGAGGCTAGTATTTTGATTTATTCTTCGTTTGAAACTTACATTGCAGTATTACCTTGTAACAGCCTAAGTCCACCGCTAGCAGATATCCCCAAATCCACCGCTAGTAGATATTGTCCTCTTTGGACTTCCCCTTTCGGGCTTCCCCCAAAGCCTCTGAAGTGGGAGTTGAAGCAGAAACCAGGAATCAGTCCACCCCGTGGAGGTTTTAATCCCGACGACCCGAACCAGCAAATAGTTGCCGAGGACATATTTGATGAGTACGGAGGCTTTCTCAGCAGTGGCGGTATTGTCCCGGAATTGCTGTCCAATTTTTCAAGCAAACCCAAGAAAAAGAAGTCTTCAAAAGAAAGTTCACGGAAAAAAGCAAAGAATCAAGAAGACGATGAGAGAATATCAAAGAAGAAAAGTAAATCTAAAAGAAAGAAACAAATCAGTAGTGAATCAAGTCCAGAAACCTCAGAGTCTGATAGGCGAAATAGAAGGAACAAGCACAAGACTTCCTATTCTTCTGATGATTTCGACTCGAAAACGCAACTTGGGACTAAAAAGCATAGAAGGAAACATCTAAATACTTCTGATGTTTCTAACTTTGAGCGGCCTCATATTACTGATCGATATTGCCCCGAACGAAGCCCTTCTGATATTTCAGACTCTGGTAGGCAGGATGAACGGAGGAAAGGCAAGGGTTCTGAATCAGAACACAGATCAGGCAGAAAAAACCAATCATACTCTTCTGAAGAGTCCGAATTCGAGACGCATCGACAAAGTGATAAAAGCAGATCCAAACACTCCTCGTCGAAAGATCATCGCCCAGATAGTCATCATTCAAGTAGCAAGATGAGACGTAGGAGGTCTTATTCGTCTGATGATTCAGAAACGAACAGGCGTCGTAGAAGTAAAGGCCAAAAGCACAATTACTCATCAGATGATTCTGAGCAAGAGAAACATGCTAGAGATAAGAAGAGAAGACGTTAGTGTATTCGTCATCAAAATTTGACGTTAAAACGATCGTTGGAGCATAGTATTTCAAAGTAAAACGACGTTGCCGATAGCTGGTAATGCCCGATATCTATTGATATAAGATGTTCTATTTGATTATTACACTTGGGAATATGATTAAAAAAAATAATACGATTGGTGTTTTGAATGCCTCCTAGTCCAAAATTATACACAAGTAATTATTTGATTGAGATATGATAAATTTGAGTCACTTTAAAAGTAAATTTGATTCATTGATTGAGGAAATA

Coding sequence (CDS)

ATGGATGGTGAGGAAGGAGGGATACGGCTAAGCAAGAGGTTCTCCGACAAATCTGGATCCGGTGAAGTTGATTACAAAACCAAGGCTGGCACCGCTTGGAGCCATTCTTATCTCAACCAGAAGCCCTGGCATCCTCTCTCGTACCCTAATCAACGCCGGAAATGGATCGCCGAGCAGACTCACTCTCAGCGAGAAAAGCGCGCCGAGGAAGTTGCTCGCGAGTATGCTCAAGAGCAGGAGTTCTTTCGCCAGGCTGCTCTTGTCTCCAAGAAAGAGAAGGAAAAGTTGGAGATGATGAAAGCGGTTAGTTTTATGTACGTACGACCACCTGGTTACAATGCTGAAAGTGCAAAAGCTGCAGAGATCGCTGATGATAGGAAGAATCAAGAGGGTGATAGCTCCTCTCAGAATCTGCCCAAGGATGGCTCTGTGAATGAAAGGCCACCAGAATCGTCAGGCACAGTCGGTAGGGACCATGGCGACAAGAAAAAACCAAGGCCAAAAGATGTTTTCGGGCGTGCTTTGCCCACCGAAGAAGAATTTGAAGTCTTAAAAAATGCCCCTCGGATGGACACAGGTGTTTTTGCGAGAGTAAAACCATTTGGGGTAGAAGTACGCAATGTGAAATGTGTTAGATGTGGGATCTTTGGCCATCAAAGTGGTGATCGTGAATGTCCGTTGAAGGATGCTATAATGCCAAATGAAGAAAATCGATTGAAAAGAGATGACCCTTTATCTACAATACTTGCGCATGCAGAGAGCAGTGAGGCTAGTATTTTGATTTATTCTTCGTTTGAAACTTACATTGCAGTATTACCTTGTAACAGCCTAAGTCCACCGCTAGCAGATATCCCCAAATCCACCGCTAGTAGATATTGTCCTCTTTGGACTTCCCCTTTCGGGCTTCCCCCAAAGCCTCTGAAGTGGGAGTTGAAGCAGAAACCAGGAATCAGTCCACCCCGTGGAGGTTTTAATCCCGACGACCCGAACCAGCAAATAGTTGCCGAGGACATATTTGATGAGTACGGAGGCTTTCTCAGCAGTGGCGGTATTGTCCCGGAATTGCTGTCCAATTTTTCAAGCAAACCCAAGAAAAAGAAGTCTTCAAAAGAAAGTTCACGGAAAAAAGCAAAGAATCAAGAAGACGATGAGAGAATATCAAAGAAGAAAAGTAAATCTAAAAGAAAGAAACAAATCAGTAGTGAATCAAGTCCAGAAACCTCAGAGTCTGATAGGCGAAATAGAAGGAACAAGCACAAGACTTCCTATTCTTCTGATGATTTCGACTCGAAAACGCAACTTGGGACTAAAAAGCATAGAAGGAAACATCTAAATACTTCTGATGTTTCTAACTTTGAGCGGCCTCATATTACTGATCGATATTGCCCCGAACGAAGCCCTTCTGATATTTCAGACTCTGGTAGGCAGGATGAACGGAGGAAAGGCAAGGGTTCTGAATCAGAACACAGATCAGGCAGAAAAAACCAATCATACTCTTCTGAAGAGTCCGAATTCGAGACGCATCGACAAAGTGATAAAAGCAGATCCAAACACTCCTCGTCGAAAGATCATCGCCCAGATAGTCATCATTCAAGTAGCAAGATGAGACGTAGGAGGTCTTATTCGTCTGATGATTCAGAAACGAACAGGCGTCGTAGAAGTAAAGGCCAAAAGCACAATTACTCATCAGATGATTCTGAGCAAGAGAAACATGCTAGAGATAAGAAGAGAAGACGTTAG

Protein sequence

MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAAEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEEFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLKRDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPFGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFSSKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERRKGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRSYSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR
Homology
[Close]
BLAST of Carg00309 vs. NCBI nr
Match: KAG7031652.1 (putative zinc finger CCHC domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1089.3 bits (2816), Expect = 0.0e+00
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0 

Query: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60
           MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT
Sbjct: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60

Query: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120
           HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA
Sbjct: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120

Query: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180
           EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE
Sbjct: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180

Query: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240
           FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK
Sbjct: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240

Query: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300
           RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF
Sbjct: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300

Query: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360
           GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS
Sbjct: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360

Query: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420
           SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK
Sbjct: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420

Query: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480
           TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR
Sbjct: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480

Query: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRS 540
           KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRS
Sbjct: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRS 540

Query: 541 YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR 580
           YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR
Sbjct: 541 YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR 579

[Close]
BLAST of Carg00309 vs. NCBI nr
Match: KAG6608027.1 (putative zinc finger CCHC domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 962.6 bits (2487), Expect = 1.5e-276
Identity = 528/579 (91.19%), Postives = 528/579 (91.19%), Query Frame = 0 

Query: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60
           MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT
Sbjct: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60

Query: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120
           HSQREKRAEEVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA
Sbjct: 61  HSQREKRAEEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120

Query: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180
           EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE
Sbjct: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180

Query: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240
           FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK
Sbjct: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240

Query: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300
           RDDPLSTILAHAESSE                                            
Sbjct: 241 RDDPLSTILAHAESSE-------------------------------------------- 300

Query: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360
                PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS
Sbjct: 301 -----PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360

Query: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420
           SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK
Sbjct: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420

Query: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480
           TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR
Sbjct: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480

Query: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRS 540
           KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDH PDSHHSSSKMRRRRS
Sbjct: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHGPDSHHSSSKMRRRRS 530

Query: 541 YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR 580
           YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR
Sbjct: 541 YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR 530

[Close]
BLAST of Carg00309 vs. NCBI nr
Match: XP_022940888.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190 [Cucurbita moschata])

HSP 1 Score: 955.7 bits (2469), Expect = 1.9e-274
Identity = 524/578 (90.66%), Postives = 526/578 (91.00%), Query Frame = 0 

Query: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60
           MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT
Sbjct: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60

Query: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120
           HSQREKRAEEVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA
Sbjct: 61  HSQREKRAEEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120

Query: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180
           EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE
Sbjct: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180

Query: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240
           FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK
Sbjct: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240

Query: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300
           RDDPLSTILAHAESSE                                            
Sbjct: 241 RDDPLSTILAHAESSE-------------------------------------------- 300

Query: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360
                PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS
Sbjct: 301 -----PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360

Query: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420
           SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK
Sbjct: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420

Query: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480
           TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR
Sbjct: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480

Query: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRS 540
           KGKGSESEHRSGRKNQSYSSEESEFETHR+SDKSRSK S SKDHRPDSHHSSSKMRRRRS
Sbjct: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRRSDKSRSKRSLSKDHRPDSHHSSSKMRRRRS 529

Query: 541 YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRR 579
           YSSDDSETNRRR+SKGQKHNYSSDDSEQEKHARDKKRR
Sbjct: 541 YSSDDSETNRRRKSKGQKHNYSSDDSEQEKHARDKKRR 529

[Close]
BLAST of Carg00309 vs. NCBI nr
Match: XP_022980971.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190 [Cucurbita maxima])

HSP 1 Score: 926.8 bits (2394), Expect = 9.3e-266
Identity = 512/586 (87.37%), Postives = 521/586 (88.91%), Query Frame = 0 

Query: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60
           MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT
Sbjct: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60

Query: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120
           HSQREKRAEEVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA
Sbjct: 61  HSQREKRAEEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120

Query: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180
           EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTV RDHGDKKKPRPKDVFGRALPTEEE
Sbjct: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVNRDHGDKKKPRPKDVFGRALPTEEE 180

Query: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240
           FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGI+GHQSGDRECPLKDAIMPNEENRLK
Sbjct: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIYGHQSGDRECPLKDAIMPNEENRLK 240

Query: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300
           RDDPLSTILAHAESSE                                            
Sbjct: 241 RDDPLSTILAHAESSE-------------------------------------------- 300

Query: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360
                PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF+
Sbjct: 301 -----PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFT 360

Query: 361 SKPKKKKSSKESSRK--------KAKNQEDDERISKKKSKSKRKKQISSESSPETSESDR 420
           SKPKKKKSSKESSRK        KAKNQEDDERISK KSKSKRKKQI SESSPETSESDR
Sbjct: 361 SKPKKKKSSKESSRKKLQSSSSRKAKNQEDDERISKNKSKSKRKKQICSESSPETSESDR 420

Query: 421 RNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISD 480
           R+RRNKHKTSYSSDDFDS+T L TK+HRRKHLNTSDVSNFERPHITDRYCPERSPSDISD
Sbjct: 421 RSRRNKHKTSYSSDDFDSETHLRTKRHRRKHLNTSDVSNFERPHITDRYCPERSPSDISD 480

Query: 481 SGRQDERRKGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSS 540
           S RQDERRKGKGSESEHRSGRKNQSYSSEESEF+THR+SDKSRSKHSSSKDHRPDSHHSS
Sbjct: 481 SSRQDERRKGKGSESEHRSGRKNQSYSSEESEFKTHRRSDKSRSKHSSSKDHRPDSHHSS 537

Query: 541 SKMRRRRSYSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRR 579
           SKMRRRRSYSSDDSETNRR RSKGQKHNYSSD+S+QEKHARDKKRR
Sbjct: 541 SKMRRRRSYSSDDSETNRRCRSKGQKHNYSSDNSDQEKHARDKKRR 537

[Close]
BLAST of Carg00309 vs. NCBI nr
Match: XP_023525698.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 921.8 bits (2381), Expect = 3.0e-264
Identity = 512/587 (87.22%), Postives = 517/587 (88.07%), Query Frame = 0 

Query: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60
           MDGEEGGIRLSKRFSDKSGSGEVDYK KAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT
Sbjct: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKAKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60

Query: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120
           HSQREKRA+EVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA
Sbjct: 61  HSQREKRADEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120

Query: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180
           EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE
Sbjct: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180

Query: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240
           FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK
Sbjct: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240

Query: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300
           RDDPLSTILAHAESSE                                            
Sbjct: 241 RDDPLSTILAHAESSE-------------------------------------------- 300

Query: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360
                PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS
Sbjct: 301 -----PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360

Query: 361 SKPKKKKSSKESSRK--------KAKNQEDDERISKKKSKSKRKKQISSESSPETSESDR 420
           SKPKKKKSSKESSRK        KAKNQEDDERISKKKSKSKRKKQISSESSPETSESDR
Sbjct: 361 SKPKKKKSSKESSRKKLQSSSSRKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDR 420

Query: 421 RNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISD 480
           RNRRNKHKTSYSSDDFD +T L TK+HRRKHLNTSDVSNFERPHITDRYCPERSPSDISD
Sbjct: 421 RNRRNKHKTSYSSDDFDPETHLRTKRHRRKHLNTSDVSNFERPHITDRYCPERSPSDISD 480

Query: 481 SGRQDERRKGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSS 540
           S RQDERRKGKGSESEHRSGRKNQSYSSEESEFETHR+SDKSRSKHSSSKDH PDSHHSS
Sbjct: 481 SSRQDERRKGKGSESEHRSGRKNQSYSSEESEFETHRRSDKSRSKHSSSKDHHPDSHHSS 532

Query: 541 SKMRRRRSYSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRRR 580
           SKMRRR+SYSSDDSETNRRRRSKGQKHNYSSDDS      RDKKRRR
Sbjct: 541 SKMRRRKSYSSDDSETNRRRRSKGQKHNYSSDDS------RDKKRRR 532

[Close]
BLAST of Carg00309 vs. ExPASy Swiss-Prot
Match: Q8VZ67 (Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidopsis thaliana OX=3702 GN=At4g19190 PE=2 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 3.7e-116
Identity = 311/646 (48.14%), Postives = 377/646 (58.36%), Query Frame = 0 

Query: 2   DGEEGGIRLSKRFSD---KSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAE 61
           +GE  GIRLSKRF+      GS EVDYKTK+GTAWSHS+LNQKPWHPLSYPNQRRKWIAE
Sbjct: 4   EGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAE 63

Query: 62  QTHSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAK 121
           QTH+Q ++RAEEVARE+AQEQEFF+QAAL+SKKE+EK+E MKAVSFMYVRPPGY+ ESAK
Sbjct: 64  QTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAK 123

Query: 122 AAEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTE 181
           AAE  D++   +G SS+Q+   D +V  RP ES G  G    ++KKPRPKDVFGRALPTE
Sbjct: 124 AAEYKDEKHKGQG-SSTQDPVADDNVGSRPEESQGG-GERTQERKKPRPKDVFGRALPTE 183

Query: 182 EEFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENR 241
           EEFEVLKNAPRM+TG+  RVKPF VEVRNVKC+RCG FGHQSGDR+CPLKDA+MPNEE R
Sbjct: 184 EEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELR 243

Query: 242 LKRDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTS 301
           LKRDDPL+ I+AH + SE                                          
Sbjct: 244 LKRDDPLTAIIAHTDPSE------------------------------------------ 303

Query: 302 PFGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSN 361
                  PLKWELKQKPG+SPPRGGF+PDDPNQQIVAEDIFDEYGGFL  G I  E+L +
Sbjct: 304 -------PLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFL-EGSIPIEILKS 363

Query: 362 FSSKPKKKKSSKESSRKKAKN---QEDDERIS-------------KKKSKSKRKKQISSE 421
            SS  KK+KS K    KK  +   +E DE  +             +KK K K KKQ  S+
Sbjct: 364 MSS-DKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSD 423

Query: 422 S-SPETSESD--RRNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITD 481
           S S E S SD  R +RR   K    S    S+       HR KH    D  + +R  I D
Sbjct: 424 SLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHY--YDEKHQKRKEIVD 483

Query: 482 RYCPERSPSDISDSGRQDERRKGKGSESEHRSGRKNQSYS--SEESEFETHRQSDK---- 541
           R       SD   S    ++R     +S HR  ++  S    SE+S+ + + +S K    
Sbjct: 484 RPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRV 543

Query: 542 -----------------SRSKHSSSK-----DHRPDSHHSSSKMRRRRSYSSDD------ 580
                            S +++ S K     D   + HH S K + +  Y + D      
Sbjct: 544 EKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFS 594

[Close]
BLAST of Carg00309 vs. ExPASy Swiss-Prot
Match: Q5ZI03 (Corepressor interacting with RBPJ 1 OS=Gallus gallus OX=9031 GN=CIR1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 8.5e-04
Identity = 139/553 (25.14%), Postives = 223/553 (40.33%), Query Frame = 0 

Query: 36  SYLNQKPWHPLSYPNQRRKWIAEQTHSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEK 95
           +++ +K +HP S  N ++ W+AEQ  S  +K+ EE+ ++Y +EQE +    L+  +    
Sbjct: 7   NFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDE---- 66

Query: 96  LEMMKAVSFMYVRPPGYNAESAKAAEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTV 155
             +   ++FMY  PPG   E A         K QEG+                       
Sbjct: 67  -RVKNGLNFMYEAPPGAKKEEA---------KEQEGE----------------------- 126

Query: 156 GRDHGDKKKPRPKDVFGRALPTEEEFEVLKNAPR---MDTGVFARVKPFGVEVRNVKCVR 215
                                TE +FE  K APR       +  R +PFG++VRNV+C++
Sbjct: 127 ---------------------TEYKFEWQKVAPREKYAKDDMNIRDQPFGIQVRNVRCIK 186

Query: 216 CGIFGHQSGDRECPLKDAIMPNEENRLKRDDPLSTILAHAESSEASILIYSSFETYIAVL 275
           C  +GH + DRECPL                 LS I A + SS+ S              
Sbjct: 187 CHKWGHVNTDRECPLFG---------------LSGINASSVSSDGS-------------- 246

Query: 276 PCNSLSPPLADIPKSTASRYCPLWTSPFGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQ 335
              S+ P         +     +  S F L    L   L               +DP+Q+
Sbjct: 247 -GPSMHP---------SELIAEMRNSGFALKQNVLGRNL-------------TANDPSQE 306

Query: 336 IVAEDIFDEYGGFLSSGGIVPELLSNFSSKPKKKKSSK--ESSRKKAKNQEDDERISKKK 395
            VA +  D+            E L + S+K K+K   K     +KK K     ++  KKK
Sbjct: 307 FVASEGDDD---------PEVEFLKSLSTKQKQKLLRKLDRLEKKKKKKDRKKKKQQKKK 366

Query: 396 SKSKRKKQISSESSPETSESDRRNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVS 455
            KSK KK   S SS  +SE+      +   +   S D  ++ ++ +KK ++   + +  S
Sbjct: 367 GKSKHKKHKMSSSSSSSSETS----GSSSDSETDSRDKAAQKKMYSKKRKKGKFSEASSS 426

Query: 456 NFERPHITDRYCPERSPSDISDS-GRQDERR-------KGKGSESEHRSGRKNQSYSSEE 515
           + E    T +   E+   D+S S G +D+ R       +   +E+  RS  + +  S   
Sbjct: 427 DSEGKAKTRK---EKLYEDLSSSHGNKDKDREKYRLLKQDSSAENSKRSSCEGERKSKSR 431

Query: 516 SEFETHRQSDKSRSKHSSSKDHR-PDSHHSSSKMRRRRSYSSDDSETNRRRRSKGQKHNY 575
            + ET R+   SRS+ +  +  R P + HSS + R+ R   S      R R  K +  + 
Sbjct: 487 YQRETERKERDSRSQSADERRGRSPCTSHSSRRQRQTRKSPSQSPGEERHR--KNETRSP 431

[Close]
BLAST of Carg00309 vs. ExPASy Swiss-Prot
Match: Q9DA19 (Corepressor interacting with RBPJ 1 OS=Mus musculus OX=10090 GN=Cir1 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 8.5e-04
Identity = 125/535 (23.36%), Postives = 209/535 (39.07%), Query Frame = 0 

Query: 36  SYLNQKPWHPLSYPNQRRKWIAEQTHSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEK 95
           +++ +K +HP S  N ++ W+AEQ  S  +K+ EE+ ++Y +EQE +    L+  +    
Sbjct: 7   NFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDE---- 66

Query: 96  LEMMKAVSFMYVRPPGYNAESAKAAEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTV 155
             +   ++FMY  PPG   E+        +++  EG+                       
Sbjct: 67  -RVKNGLNFMYEAPPGVKKEN-------KEKEETEGE----------------------- 126

Query: 156 GRDHGDKKKPRPKDVFGRALPTEEEFEVLKNAPR---MDTGVFARVKPFGVEVRNVKCVR 215
                                TE +FE  K APR       +  R +PFG++VRNV+C++
Sbjct: 127 ---------------------TEYKFEWQKGAPREKYAKDDMNIRDQPFGIQVRNVRCIK 186

Query: 216 CGIFGHQSGDRECPLKDAIMPNEENRLKRDDPLSTILAHAESSEASILIYSSFETYIAVL 275
           C  +GH + DRECPL                 LS I A +                   +
Sbjct: 187 CHKWGHVNTDRECPLFG---------------LSGINASS-------------------V 246

Query: 276 PCNSLSPPLADIPKSTASRYCPLWTSPFGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQ 335
           P +   P +       +     +  S F L    L   L               +DP+Q 
Sbjct: 247 PTDGSGPSM-----HPSELIAEMRNSGFALKRNVLGRNL-------------TANDPSQD 306

Query: 336 IVAEDIFDEYGGFLSSGGIVPELLSNFSSKPKKKKSSK----ESSRKKAKNQEDDERISK 395
            VA D  ++            E L + ++K K+K   K    E  +KK K+ +  +++ K
Sbjct: 307 YVASDCEED---------PEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKSDKKKKKLQK 366

Query: 396 KKSKSKRKKQISSESSPETSESDRRNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSD 455
            K+K K++K  S  SS  +S S   +  +   +S SS+  DS ++   K+ +R+      
Sbjct: 367 SKNKHKKRKNKSPSSSSSSSSSSSSSSSSSSSSSSSSETSDSSSESDNKEKKREKEKRKK 415

Query: 456 VSNFERPHITDRYCPERSPSD-ISDSGRQDERRKGKGSESEHRSGRKNQSYSSEESEFET 515
               +        C E  P + + +        +GK  E      R  +  SS E+    
Sbjct: 427 KKKTKCSESKSSDCKEDKPKNMLYEELSSSHSDRGKAQEKL----RFPKQESSGENSMWV 415

Query: 516 HRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRSYSSDDSETNRRRRSKG---QKH 560
           H  SD++   H  S + +      S + R  RS S   +E++RR RS+    QKH
Sbjct: 487 HSASDRTSRSHRHSPEKK-----GSDRNRGIRSRSRSRAESSRRSRSRSPYRQKH 415

[Close]
BLAST of Carg00309 vs. ExPASy TrEMBL
Match: A0A6J1FQJ8 (uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Cucurbita moschata OX=3662 GN=LOC111446340 PE=4 SV=1)

HSP 1 Score: 955.7 bits (2469), Expect = 9.0e-275
Identity = 524/578 (90.66%), Postives = 526/578 (91.00%), Query Frame = 0 

Query: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60
           MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT
Sbjct: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60

Query: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120
           HSQREKRAEEVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA
Sbjct: 61  HSQREKRAEEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120

Query: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180
           EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE
Sbjct: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180

Query: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240
           FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK
Sbjct: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240

Query: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300
           RDDPLSTILAHAESSE                                            
Sbjct: 241 RDDPLSTILAHAESSE-------------------------------------------- 300

Query: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360
                PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS
Sbjct: 301 -----PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360

Query: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420
           SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK
Sbjct: 361 SKPKKKKSSKESSRKKAKNQEDDERISKKKSKSKRKKQISSESSPETSESDRRNRRNKHK 420

Query: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480
           TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR
Sbjct: 421 TSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERR 480

Query: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRRS 540
           KGKGSESEHRSGRKNQSYSSEESEFETHR+SDKSRSK S SKDHRPDSHHSSSKMRRRRS
Sbjct: 481 KGKGSESEHRSGRKNQSYSSEESEFETHRRSDKSRSKRSLSKDHRPDSHHSSSKMRRRRS 529

Query: 541 YSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRR 579
           YSSDDSETNRRR+SKGQKHNYSSDDSEQEKHARDKKRR
Sbjct: 541 YSSDDSETNRRRKSKGQKHNYSSDDSEQEKHARDKKRR 529

[Close]
BLAST of Carg00309 vs. ExPASy TrEMBL
Match: A0A6J1IV41 (uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Cucurbita maxima OX=3661 GN=LOC111480262 PE=4 SV=1)

HSP 1 Score: 926.8 bits (2394), Expect = 4.5e-266
Identity = 512/586 (87.37%), Postives = 521/586 (88.91%), Query Frame = 0 

Query: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60
           MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT
Sbjct: 1   MDGEEGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQT 60

Query: 61  HSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120
           HSQREKRAEEVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA
Sbjct: 61  HSQREKRAEEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKAA 120

Query: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEEE 180
           EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTV RDHGDKKKPRPKDVFGRALPTEEE
Sbjct: 121 EIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVNRDHGDKKKPRPKDVFGRALPTEEE 180

Query: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRLK 240
           FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGI+GHQSGDRECPLKDAIMPNEENRLK
Sbjct: 181 FEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIYGHQSGDRECPLKDAIMPNEENRLK 240

Query: 241 RDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSPF 300
           RDDPLSTILAHAESSE                                            
Sbjct: 241 RDDPLSTILAHAESSE-------------------------------------------- 300

Query: 301 GLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFS 360
                PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF+
Sbjct: 301 -----PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNFT 360

Query: 361 SKPKKKKSSKESSRK--------KAKNQEDDERISKKKSKSKRKKQISSESSPETSESDR 420
           SKPKKKKSSKESSRK        KAKNQEDDERISK KSKSKRKKQI SESSPETSESDR
Sbjct: 361 SKPKKKKSSKESSRKKLQSSSSRKAKNQEDDERISKNKSKSKRKKQICSESSPETSESDR 420

Query: 421 RNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISD 480
           R+RRNKHKTSYSSDDFDS+T L TK+HRRKHLNTSDVSNFERPHITDRYCPERSPSDISD
Sbjct: 421 RSRRNKHKTSYSSDDFDSETHLRTKRHRRKHLNTSDVSNFERPHITDRYCPERSPSDISD 480

Query: 481 SGRQDERRKGKGSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSS 540
           S RQDERRKGKGSESEHRSGRKNQSYSSEESEF+THR+SDKSRSKHSSSKDHRPDSHHSS
Sbjct: 481 SSRQDERRKGKGSESEHRSGRKNQSYSSEESEFKTHRRSDKSRSKHSSSKDHRPDSHHSS 537

Query: 541 SKMRRRRSYSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRR 579
           SKMRRRRSYSSDDSETNRR RSKGQKHNYSSD+S+QEKHARDKKRR
Sbjct: 541 SKMRRRRSYSSDDSETNRRCRSKGQKHNYSSDNSDQEKHARDKKRR 537

[Close]
BLAST of Carg00309 vs. ExPASy TrEMBL
Match: A0A6J1CE74 (uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Momordica charantia OX=3673 GN=LOC111010731 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 1.0e-222
Identity = 453/595 (76.13%), Postives = 485/595 (81.51%), Query Frame = 0 

Query: 1   MDGEE-GGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ 60
           MDGEE GGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ
Sbjct: 1   MDGEEGGGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ 60

Query: 61  THSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA 120
           THSQREKRA+EVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA
Sbjct: 61  THSQREKRADEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA 120

Query: 121 AEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEE 180
           AEIADDRK Q+GD+ S +LPKDGS NERPPESS TVGRD G+KKKPRPKDVFGRALPTEE
Sbjct: 121 AEIADDRKKQDGDNPSHDLPKDGSANERPPESSATVGRDPGEKKKPRPKDVFGRALPTEE 180

Query: 181 EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRL 240
           EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGI+GHQSGDRECPLKDAIMPNEE+RL
Sbjct: 181 EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIYGHQSGDRECPLKDAIMPNEESRL 240

Query: 241 KRDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSP 300
           KRDDPL+TILAHA++SE                                           
Sbjct: 241 KRDDPLTTILAHADNSE------------------------------------------- 300

Query: 301 FGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF 360
                 PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFL SGGIVPELLSNF
Sbjct: 301 ------PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFL-SGGIVPELLSNF 360

Query: 361 SSKPKKKKSSKESSRK--------KAKNQEDDERISKKKSKSKRKKQISSESSPETSESD 420
           SSKPKKKKSSKESSRK        KAK+ ED+ER SKKK+KSKRKKQISSESS ETSESD
Sbjct: 361 SSKPKKKKSSKESSRKKFLSSPRRKAKDLEDNERTSKKKNKSKRKKQISSESSSETSESD 420

Query: 421 RRNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDIS 480
           RR+RRNKHK SY SDD +S+  L TKKHRRKHL TSDVSNFER  I+DRYCPE S SDIS
Sbjct: 421 RRDRRNKHKASYLSDDSNSEMHLRTKKHRRKHLYTSDVSNFERHRISDRYCPEPSTSDIS 480

Query: 481 DSGRQDERRKGKGSES--------EHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKD 540
           +S R D+ RK K S S        EHRS RKNQSYSSE+S+FE H+++ KSRSKH+SS+ 
Sbjct: 481 ESERHDKGRKRKDSYSCRKLESGLEHRSARKNQSYSSEDSDFERHQRNGKSRSKHTSSRG 540

Query: 541 HRPDSHHSSSKMRRRRSYSSDDSETNRRRRSKGQKHNYSSDDSEQEKHARDKKRR 579
              DSHH +SKMR RRS+SSDDSET R +RSK +KHNYSSDD +QE H R KKR+
Sbjct: 541 LHSDSHHLNSKMRHRRSHSSDDSETKRHQRSKCRKHNYSSDDYDQEGHDRVKKRK 545

[Close]
BLAST of Carg00309 vs. ExPASy TrEMBL
Match: A0A5A7UAI9 (Putative zinc finger CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00340 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 1.4e-214
Identity = 454/639 (71.05%), Postives = 480/639 (75.12%), Query Frame = 0 

Query: 1   MDGEE-GGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ 60
           MDGEE GGIRLSKRFSDK+GSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ
Sbjct: 1   MDGEEGGGIRLSKRFSDKAGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ 60

Query: 61  THSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA 120
           THSQREKRAEEVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA
Sbjct: 61  THSQREKRAEEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA 120

Query: 121 AEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEE 180
           AEIADDRK QEGD+ SQ+LP D S NERPPESS TV R+ G  KKPRPKDVFGRALPTEE
Sbjct: 121 AEIADDRKKQEGDNPSQDLPIDSSANERPPESSSTVSREPG--KKPRPKDVFGRALPTEE 180

Query: 181 EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRL 240
           EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEE+RL
Sbjct: 181 EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEESRL 240

Query: 241 KRDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSP 300
           KRDDPL+TILA+AE+SE                                           
Sbjct: 241 KRDDPLTTILANAETSE------------------------------------------- 300

Query: 301 FGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF 360
                 PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF
Sbjct: 301 ------PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF 360

Query: 361 SSKPKKKKSSKESSRK--------KAKNQEDDERISKKKSKSKRKKQISSESSPETSESD 420
           SSKPKKKK S++SSRK        K K+ EDDERISKKK KSKRKKQ++SESS ETSESD
Sbjct: 361 SSKPKKKKVSRQSSRKKFQSSSSRKEKDLEDDERISKKKRKSKRKKQVNSESSSETSESD 420

Query: 421 RR--------------------------------------------NRRNKHKTSYSSDD 480
           RR                                            +RRNKHK SY SDD
Sbjct: 421 RRDRRIKHKISHLSDDSDSKTHHKTKKHRRKHLNTSDVSETSESNNDRRNKHKISYLSDD 480

Query: 481 FDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERRKGK---- 540
            DSKT   TKKHRR+ LNTSDVSNFE PHI DRYCPE SP DIS S R D+ RK K    
Sbjct: 481 SDSKTHRRTKKHRREQLNTSDVSNFEWPHIADRYCPEPSPPDISGSERHDKGRKRKDFYS 540

Query: 541 ----GSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRR 579
                SE EH+SGRKNQS+SSE+S FE H  SDK+RSKHSSSK    DSHHSSSK R R+
Sbjct: 541 YKRLDSELEHKSGRKNQSHSSEDSGFERHPLSDKTRSKHSSSKGLHLDSHHSSSKTRPRK 588

[Close]
BLAST of Carg00309 vs. ExPASy TrEMBL
Match: A0A1S3BAM6 (uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Cucumis melo OX=3656 GN=LOC103487621 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 1.4e-214
Identity = 454/639 (71.05%), Postives = 480/639 (75.12%), Query Frame = 0 

Query: 1   MDGEE-GGIRLSKRFSDKSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ 60
           MDGEE GGIRLSKRFSDK+GSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ
Sbjct: 1   MDGEEGGGIRLSKRFSDKAGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQ 60

Query: 61  THSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA 120
           THSQREKRAEEVAREYAQEQEFFRQ ALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA
Sbjct: 61  THSQREKRAEEVAREYAQEQEFFRQTALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAKA 120

Query: 121 AEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTEE 180
           AEIADDRK QEGD+ SQ+LP D S NERPPESS TV R+ G  KKPRPKDVFGRALPTEE
Sbjct: 121 AEIADDRKKQEGDNPSQDLPIDSSANERPPESSSTVSREPG--KKPRPKDVFGRALPTEE 180

Query: 181 EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENRL 240
           EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEE+RL
Sbjct: 181 EFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEESRL 240

Query: 241 KRDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTSP 300
           KRDDPL+TILA+AE+SE                                           
Sbjct: 241 KRDDPLTTILANAETSE------------------------------------------- 300

Query: 301 FGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF 360
                 PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF
Sbjct: 301 ------PLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSNF 360

Query: 361 SSKPKKKKSSKESSRK--------KAKNQEDDERISKKKSKSKRKKQISSESSPETSESD 420
           SSKPKKKK S++SSRK        K K+ EDDERISKKK KSKRKKQ++SESS ETSESD
Sbjct: 361 SSKPKKKKVSRQSSRKKFQSSSSRKEKDLEDDERISKKKRKSKRKKQVNSESSSETSESD 420

Query: 421 RR--------------------------------------------NRRNKHKTSYSSDD 480
           RR                                            +RRNKHK SY SDD
Sbjct: 421 RRDRRIKHKISHLSDDSDSKTHHKTKKHRRKHLNTSDVSETSESNNDRRNKHKISYLSDD 480

Query: 481 FDSKTQLGTKKHRRKHLNTSDVSNFERPHITDRYCPERSPSDISDSGRQDERRKGK---- 540
            DSKT   TKKHRR+ LNTSDVSNFE PHI DRYCPE SP DIS S R D+ RK K    
Sbjct: 481 SDSKTHRRTKKHRREQLNTSDVSNFEWPHIADRYCPEPSPPDISGSERHDKGRKRKDFYS 540

Query: 541 ----GSESEHRSGRKNQSYSSEESEFETHRQSDKSRSKHSSSKDHRPDSHHSSSKMRRRR 579
                SE EH+SGRKNQS+SSE+S FE H  SDK+RSKHSSSK    DSHHSSSK R R+
Sbjct: 541 YKRLDSELEHKSGRKNQSHSSEDSGFERHPLSDKTRSKHSSSKGLHLDSHHSSSKTRPRK 588

[Close]
BLAST of Carg00309 vs. TAIR 10
Match: AT4G19190.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 420.2 bits (1079), Expect = 2.6e-117
Identity = 311/646 (48.14%), Postives = 377/646 (58.36%), Query Frame = 0 

Query: 2   DGEEGGIRLSKRFSD---KSGSGEVDYKTKAGTAWSHSYLNQKPWHPLSYPNQRRKWIAE 61
           +GE  GIRLSKRF+      GS EVDYKTK+GTAWSHS+LNQKPWHPLSYPNQRRKWIAE
Sbjct: 4   EGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAE 63

Query: 62  QTHSQREKRAEEVAREYAQEQEFFRQAALVSKKEKEKLEMMKAVSFMYVRPPGYNAESAK 121
           QTH+Q ++RAEEVARE+AQEQEFF+QAAL+SKKE+EK+E MKAVSFMYVRPPGY+ ESAK
Sbjct: 64  QTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAK 123

Query: 122 AAEIADDRKNQEGDSSSQNLPKDGSVNERPPESSGTVGRDHGDKKKPRPKDVFGRALPTE 181
           AAE  D++   +G SS+Q+   D +V  RP ES G  G    ++KKPRPKDVFGRALPTE
Sbjct: 124 AAEYKDEKHKGQG-SSTQDPVADDNVGSRPEESQGG-GERTQERKKPRPKDVFGRALPTE 183

Query: 182 EEFEVLKNAPRMDTGVFARVKPFGVEVRNVKCVRCGIFGHQSGDRECPLKDAIMPNEENR 241
           EEFEVLKNAPRM+TG+  RVKPF VEVRNVKC+RCG FGHQSGDR+CPLKDA+MPNEE R
Sbjct: 184 EEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELR 243

Query: 242 LKRDDPLSTILAHAESSEASILIYSSFETYIAVLPCNSLSPPLADIPKSTASRYCPLWTS 301
           LKRDDPL+ I+AH + SE                                          
Sbjct: 244 LKRDDPLTAIIAHTDPSE------------------------------------------ 303

Query: 302 PFGLPPKPLKWELKQKPGISPPRGGFNPDDPNQQIVAEDIFDEYGGFLSSGGIVPELLSN 361
                  PLKWELKQKPG+SPPRGGF+PDDPNQQIVAEDIFDEYGGFL  G I  E+L +
Sbjct: 304 -------PLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFL-EGSIPIEILKS 363

Query: 362 FSSKPKKKKSSKESSRKKAKN---QEDDERIS-------------KKKSKSKRKKQISSE 421
            SS  KK+KS K    KK  +   +E DE  +             +KK K K KKQ  S+
Sbjct: 364 MSS-DKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSD 423

Query: 422 S-SPETSESD--RRNRRNKHKTSYSSDDFDSKTQLGTKKHRRKHLNTSDVSNFERPHITD 481
           S S E S SD  R +RR   K    S    S+       HR KH    D  + +R  I D
Sbjct: 424 SLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHY--YDEKHQKRKEIVD 483

Query: 482 RYCPERSPSDISDSGRQDERRKGKGSESEHRSGRKNQSYS--SEESEFETHRQSDK---- 541
           R       SD   S    ++R     +S HR  ++  S    SE+S+ + + +S K    
Sbjct: 484 RPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRV 543

Query: 542 -----------------SRSKHSSSK-----DHRPDSHHSSSKMRRRRSYSSDD------ 580
                            S +++ S K     D   + HH S K + +  Y + D      
Sbjct: 544 EKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFS 594

The following BLAST results are available for this feature:
BLAST of Carg00309 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7031652.10.0e+00100.00putative zinc finger CCHC domain-containing protein, partial [Cucurbita argyrosp... [more]
KAG6608027.11.5e-27691.19putative zinc finger CCHC domain-containing protein, partial [Cucurbita argyrosp... [more]
XP_022940888.11.9e-27490.66uncharacterized zinc finger CCHC domain-containing protein At4g19190 [Cucurbita ... [more]
XP_022980971.19.3e-26687.37uncharacterized zinc finger CCHC domain-containing protein At4g19190 [Cucurbita ... [more]
XP_023525698.13.0e-26487.22uncharacterized zinc finger CCHC domain-containing protein At4g19190 [Cucurbita ... [more]
BLAST of Carg00309 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZ673.7e-11648.14Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidop... [more]
Q5ZI038.5e-0425.14Corepressor interacting with RBPJ 1 OS=Gallus gallus OX=9031 GN=CIR1 PE=2 SV=1[more]
Q9DA198.5e-0423.36Corepressor interacting with RBPJ 1 OS=Mus musculus OX=10090 GN=Cir1 PE=1 SV=2[more]
BLAST of Carg00309 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FQJ89.0e-27590.66uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Cucurbit... [more]
A0A6J1IV414.5e-26687.37uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Cucurbit... [more]
A0A6J1CE741.0e-22276.13uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Momordic... [more]
A0A5A7UAI91.4e-21471.05Putative zinc finger CCHC domain-containing protein OS=Cucumis melo var. makuwa ... [more]
A0A1S3BAM61.4e-21471.05uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Cucumis ... [more]
BLAST of Carg00309 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G19190.12.6e-11748.14zinc knuckle (CCHC-type) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 42..78
e-value: 7.1E-11
score: 52.1
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 43..78
e-value: 1.2E-10
score: 41.4
IPR041670Zinc knucklePFAMPF15288zf-CCHC_6coord: 208..229
e-value: 2.3E-5
score: 24.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..434
IPR040014Corepressor interacting with RBPJ 1PANTHERPTHR13151CBF1 INTERACTING COREPRESSOR CIRcoord: 9..576

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00309-RACarg00309-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045892 negative regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003714 transcription corepressor activity