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Carg00137 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGCAGGGGCTCGTGCGACGGCTACCACTCCTCCTCCTCCTCCTCTTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCAGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTGCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCGTGTCATATACCCAGACGATGAACAAAGGTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGATGATGATCTAAACTTTGTCACCAGCTTTTGTGGGAATTCTTCGTGTGTTTGGACTGCAAAACAAGATGGTCTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAATTGGTTCCATAATCAAAACCAAACCAAACCAAACTTGGGTTGTCCGTTGCTATTACATGTTTGATGTTATGATCATGTTTGTTTCTAATCACTTATGTTGAATAATTTTTTTATTTTTTTATTGTTATAGTTTATGAGTGTATGATTCATGGCTGAAATTATGTTTACATCTCTTCGGGCTAATTTGTTGTAAAATGTATTGTAACGAGATATGACTATTTATCGATTCTTCCTATTTGAGTTATATGTTATCAATGTCATTGTTGTTGCTCGTTGTTTTTTTTTTGTTATCTTATAATGAATCTGTTAATTGAAAAGACTATTATTTCACATGATCATCATATGTGACTCGATCTGTGACTCGATCTCAATCGTGATTATGAATGTAAGTTTCTAAAAACTTTTAATGGTTTATATTTTGTATTGCAAGTGTTTGGTCCTTAATTAGAATGTACAAATTTCCCATGCTGACTTTCTCAACAAAAACATTAGGTTTCCCCTTACATTTCTCAACAAAAACAACTATTTTGAGTCTTTTCCATGCCAAAAACTTCATGTATATATACACACCCAAATCACAAGAACATGAACTCGTTATCCATCAGACATCAAAAGATAACCAAACAATAATAGCACTTACTCCTTCGAGCTCAATCAGACAAAATCTAAACCCTATGGATCGACTTGTATTATTATGGCTCGGGCTCTTACTTATGATGTCCTGTCCAACAACGGGTGCCAGTGAAGAACAACAACAACAACAACAGGAAAGATCTCTTGTTGATATCCCCAAATTTCATGTCGAAATTCGCAATGGGTTGAAAATGTATATATTGGATAGCCATTGCTTTTCTAAAGACGACGATTTGGGATTACACATACTCTTTCCAGACGATCAACAAAGTTGGTCGTTTAGAGACAATTTTTGGGGAAGAACATTATTCCATTGTAGATTGGAATGGGAAAGAGGGTTTAAGGAATTTGATGCATTCTTTGTTGATGAGGTTTTCTTTGATGAGTACTGTTCCAACTTTAGGTGCATTTGGATCGCTAAACAAGATGGGATTTATATGTTGAATAAAGCTGGTCAAGAGGTCTTCTATCATCGTTGGAAATTGCTTAGGTTGCCGTGA ATGGCGGAGCAGGGGCTCGTGCGACGGCTACCACTCCTCCTCCTCCTCCTCTTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCAGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTGCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCGTGTCATATACCCAGACGATGAACAAAGGTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGATGATGATCTAAACTTTGTCACCAGCTTTTGTGGGAATTCTTCGTGTGTTTGGACTGCAAAACAAGATGGTCTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAATTGACATCAAAAGATAACCAAACAATAATAGCACTTACTCCTTCGAGCTCAATCAGACAAAATCTAAACCCTATGGATCGACTTGTATTATTATGGCTCGGGCTCTTACTTATGATGTCCTGTCCAACAACGGGTGCCAGTGAAGAACAACAACAACAACAACAGGAAAGATCTCTTGTTGATATCCCCAAATTTCATGTCGAAATTCGCAATGGGTTGAAAATGTATATATTGGATAGCCATTGCTTTTCTAAAGACGACGATTTGGGATTACACATACTCTTTCCAGACGATCAACAAAGTTGGTCGTTTAGAGACAATTTTTGGGGAAGAACATTATTCCATTGTAGATTGGAATGGGAAAGAGGGTTTAAGGAATTTGATGCATTCTTTGTTGATGAGGTTTTCTTTGATGAGTACTGTTCCAACTTTAGGTGCATTTGGATCGCTAAACAAGATGGGATTTATATGTTGAATAAAGCTGGTCAAGAGGTCTTCTATCATCGTTGGAAATTGCTTAGGTTGCCGTGA ATGGCGGAGCAGGGGCTCGTGCGACGGCTACCACTCCTCCTCCTCCTCCTCTTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCAGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTGCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCGTGTCATATACCCAGACGATGAACAAAGGTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGATGATGATCTAAACTTTGTCACCAGCTTTTGTGGGAATTCTTCGTGTGTTTGGACTGCAAAACAAGATGGTCTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAATTGACATCAAAAGATAACCAAACAATAATAGCACTTACTCCTTCGAGCTCAATCAGACAAAATCTAAACCCTATGGATCGACTTGTATTATTATGGCTCGGGCTCTTACTTATGATGTCCTGTCCAACAACGGGTGCCAGTGAAGAACAACAACAACAACAACAGGAAAGATCTCTTGTTGATATCCCCAAATTTCATGTCGAAATTCGCAATGGGTTGAAAATGTATATATTGGATAGCCATTGCTTTTCTAAAGACGACGATTTGGGATTACACATACTCTTTCCAGACGATCAACAAAGTTGGTCGTTTAGAGACAATTTTTGGGGAAGAACATTATTCCATTGTAGATTGGAATGGGAAAGAGGGTTTAAGGAATTTGATGCATTCTTTGTTGATGAGGTTTTCTTTGATGAGTACTGTTCCAACTTTAGGTGCATTTGGATCGCTAAACAAGATGGGATTTATATGTTGAATAAAGCTGGTCAAGAGGTCTTCTATCATCGTTGGAAATTGCTTAGGTTGCCGTGA MAEQGLVRRLPLLLLLLFHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNFHCKLEWAYGFVEFDAFDDDLNFVTSFCGNSSCVWTAKQDGLYLADQNGQLVFKDHWELTSKDNQTIIALTPSSSIRQNLNPMDRLVLLWLGLLLMMSCPTTGASEEQQQQQQERSLVDIPKFHVEIRNGLKMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNFWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKAGQEVFYHRWKLLRLP Homology
BLAST of Carg00137 vs. NCBI nr
Match: KAG7031483.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 706.8 bits (1823), Expect = 8.7e-200 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
BLAST of Carg00137 vs. NCBI nr
Match: KAG6600848.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 339.7 bits (870), Expect = 2.8e-89 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of Carg00137 vs. NCBI nr
Match: XP_022942056.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 326.2 bits (835), Expect = 3.2e-85 Identity = 153/159 (96.23%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Carg00137 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 313.9 bits (803), Expect = 1.6e-81 Identity = 147/161 (91.30%), Postives = 153/161 (95.03%), Query Frame = 0
BLAST of Carg00137 vs. NCBI nr
Match: KAG6600849.1 (S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 293.9 bits (751), Expect = 1.8e-75 Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.1e-11 Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10 Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.5e-08 Identity = 42/133 (31.58%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.5e-08 Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07 Identity = 31/83 (37.35%), Postives = 41/83 (49.40%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy TrEMBL
Match: A0A6J1FMU2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85 Identity = 153/159 (96.23%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48 Identity = 82/129 (63.57%), Postives = 105/129 (81.40%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.1e-38 Identity = 67/134 (50.00%), Postives = 100/134 (74.63%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.0e-37 Identity = 76/163 (46.63%), Postives = 109/163 (66.87%), Query Frame = 0
BLAST of Carg00137 vs. ExPASy TrEMBL
Match: A0A0A0KIQ4 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.9e-31 Identity = 68/128 (53.12%), Postives = 90/128 (70.31%), Query Frame = 0
BLAST of Carg00137 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 69.7 bits (169), Expect = 5.0e-12 Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Carg00137 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 68.9 bits (167), Expect = 8.6e-12 Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of Carg00137 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-09 Identity = 42/133 (31.58%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of Carg00137 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-09 Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 0
BLAST of Carg00137 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 60.1 bits (144), Expect = 4.0e-09 Identity = 38/94 (40.43%), Postives = 47/94 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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