Carg00060 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00060
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	polyadenylate-binding protein-interacting protein 4-like
Location	Carg_Chr04: 5088272 .. 5096363 (-)
RNA-Seq Expression	Carg00060
Synteny	Carg00060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTCTTCTTCTCCGTTAGATCTTGTTTCTGCAACTCCACCTTTATTTTTTATTCTCACAGAGACGAACACCACCGTTTGATCCAGCTCTCTCACTCTCAGAAACTGGTATATGGGTTGCAGAAACAGGGAGTTTTCGGAGGATGAGACTTGCTCTTCCACGCTCAGCGAGGCCCTGCTCTTTGCCACCATGTGCCTCATTGGCCTGCCCGTTGAGGTTCACATCAAGGATGGCTCTGTCTATTCCGGCATCTTCCACACTGCATGTGTCGAGAATGAATATGGTGCGTTTCCATTGCCTTCTTCTTAATTCGTCTTTGCTTCCTCCATTTATTTCCCCTGAATCTATTAATTGCTTGAATCGTGCTTTATACGTTCGTTCTTTTGTCAATTTGTGTCCTGCTTTTGCATCGGTTTTTATTTGTTTTTTTATATATATAAAATGTATCGCGTGCATTTGGTGGCACGGTGTGTAGATGATTTGGATCCGAAATCTGATTTGGGCATGGGTAGATGAAAAGATTGGCATCTATTCTTTTTTTTTTTTTTTTTCCATCGCGTTCTTTGGGACAGGAGACGCACCTATGTCGTTAATTGAATTTGTTGATTTTGCTTTTTTATCCTCCGATGTTTTAATGCAACCTGCCGTGGTTCCCCTACTTCTTTTCCCCTAAACATTGACAAATGGCGATAGTTATGAAATCAATCTGTGTATCACTAGGCGTCGTTCTGAAGAAAGCAAGGATGACAAAAAAGGGCAAAAGGAATGTGAATGTCGATGATGGAGTTGTAATTGATACTCTTATCGTTCTTTCTGGTGATCTTGTCCAAGTTGTTGCTACGGTATGTAATTAAGGCCACTTTTATTTCGCAGTTTCATGTTATTAAATTTAATTTAGTTTAAATCTAGGTCATACTGGGTTTTTCAAATGTACAGGAAGTTCTACTTCCGGCTGGTAGTTTTTCCAAAAGTATGGCTGTTTGTGATAACGAATCCATGGTCAATGATCCCACTTCGTTGCTTCCAGCGACAGAGACTAAGACATGTATGGAATCATTCAAGGAGGGGAGTCAGATTAATCAAACAAGGTATACTTCCATTGTGATATTTCATATATTTATGGATTGATAGCAATCTGGTCTAAATTTTGGAGGTTGATATTCTTTTGTATGTGGCATTTGGAGTGATGTTATTGGTAATAGCTGTTTCTTACGAAGCATGATTGTTGTTGGAACTGGAAGATTGTTTCCAAGGTCACTATTGGTATAAATGTAACCTTATTTCTAACATGGAAGCAAATTGAGAAGAACAAAGTAACTGACCAAAAAAAAATATATGTAGAAATTTTTGTTGAGGAATGTTGTCAACTCGGCCTCTTATTTAAAATTAGAACTGAGGAATTTATCCTAAACGGAGCTTTCTGTGGTGGAGAAGGTTATGTTGTCTTCAAAATGACCATTTTCATCTTGATTTTATTTGGAAAGATATTCTGTTCTCTCCTACTTAGATCTTACATATATACTGAACATATTCTTGCTGCTAAATCAGTTACATGAAAGTAGCTTTAGGAAATTATTATTTATTGGCATGTTAACAAGCATTGTGCAACATATAGAAAACTACTATCTCTTGCTTAGTAATTCGTATTTCAAAATTGGAGAAGGTTTTACTAATCTGAGCATAGTTTGACTGGTTAAGGCATTGTGTCCTCTATAGGTTTAAATTGTTTCCCCCCAAATTTGTTGACCTAAAAAAATGGGGAAGGTTTTCAATTATACTCTCGTGTGATATATGTGCTTATTGAAATTGACATGACTACCAACACATGTAATTCTTAAAACAGTGACCTGATCCAAGATCAAAATGGGTTTGCTCATGGTTCACTGCCTACTGTTACTGGGAAGCAAAGTGATGTTAGACAACTATTGGGAGACAATGTTGAGAACAACAAGGAAGATGCACAACAGAAAAAGGAAAGGTCAAATTGCAAAAAGGTGAAGTTTCCGTGCCTTGCTTGTGTAGTAGTTGCACCCCCCACCCAGCGTATGCTTCTAAAAGTATCAAGTTTTAAATGGAGCGATAACCCTATTAAAAGGATAGTTAAGAAACACTCTTGTATTTATTAGGATGGCCTCCTCAAAGATATTACAGTATGTATTTTTCTTTTTGTTTATTTATGTATATTTTTGCAAAGACTAGAATTAGTACTTGATAAAACACTGCTAACTGTTTGTATGAATTAGTTCATTGGCATGATATATAAGTTTATCCATGTTAGTCATTGTTTTGAAGTTTATCATTTTCGTATTCATAATTGTTTTCCATTTTCCCCAACCTCCTTCTTGCAGCCTGAAGGTGTCACTGATGCTGCAATCAATTGGAGGTTTGAAATAACTTGCCTTTCCTAAATATATTTCTTTCTTTATGGTTGTCCAGAAAAGAATTGGGGCCTATCCCATGATGAGGCCGTCAAAGTACATGTGGGTCGTAAACTATCATCAGTTCTTTTATTACTGTTGTTATTGTTACTATAATTTTTGGTAAGAAATAATTTCATACAAAAAAGTGAACATTTTGTGTGGCAAATTGTTCTTACTTTATTTGAGATTGATATATCTGATGGTTCAATTTTATTTTGTAAATAATTACTATCATCCGTGCTTTCATTATTATTATTATTATTGGTAAGAAACAATTTCATACCAAAAAGGGACATGCACCACACATGCTCTTACTTTATTTGAGATTGATATATCTGTTGGTTCAGTTTTACTTTGTAAATTGCAACCAGTTACTCTTGTTTCAGTCCTTATCTTTTGGTTTATGATAAATTATTTGACAGACGGGACCCAGATAACCAATTGAAAAAGGAGCAGGATGATCATGGTCAGGAATTTGACTTGCATAAAGGAGCCAATGTATGTCAATTAAGCTTATTCAGGACCTGGGTTTTCTTGAGAATGAGATGTTATTCCTTTGCGTGGACTAAATTTTAGATTGACTACTTTTGTTTCTGTAGGGTGATCGAGTTCAATCCTCTATATTGAGTGGTGAGTTCAAAGTGCTGTTAATGACATCTGGCTCACCTAATTTGGTTATAAAGTTTGTATGGAAGGGTCTTCTTAGTATTGAAACTAAATATACTTGCAGATGGTTTTTATTTTAAATGTTTATTTGCAAATAGCATTACAGCAGTCTAGTTTTAGTGGCAACTTACCTACGGTATTAAATACAGTAAAAGAAATTACATCATAGGTGGTTGGCCTTTGAGATAAGCTTGTTGTTAGTTTAGGCATTAATGAATTTGCTATATAGTTTTCAAGTACCTTCCAGAGTGGAGAAGTCTTTGTAATGTTTATCATTCCTTGCCTACTTGAATTATAGTTTTCTTTATATACGGTGGATTTTCAGCATGAAAAAGCAATTCTGAGAAGAAAAAGAACTTAATGATGACCTCAAAAATATTGTTTAAAGTGTATAACTGTTTTGCTCCCGCTATTGTTAAATTAGAGAAACCATGCACTGAAAGATCCATCTCAGCCAACACTACAAATGCATATTCAGTTGGTGTCTCAACTTCTTCACGTTCGTCTGTGGATAGTAGCATGGACTCATGTCGCAGTTCTATAACGTCAACGATTGACATGGCCCCTTCTCACGGTTCAGAATCCAATAAAAGTGGCAAGGTACGTATCATTATCAATTTATCACTCTTATAAAAGAAAAATTATCAATTTATCACTATCACTACTAGAACTATAAGATAGGATGTTTATGAGACTTTTGGTTACTTTTGAGTACCTTTTTATTTGGATGATGTCAAAATATACCTTCATCCAACTAACTGGGTTGAATTGTTTTATTACAGATTATCTGCCAGGGGCTGTTAAAAATTTATCATGCTATATTTATATGTTAAAAATTCTACTATTCTTCCCAGCCAAAATTCCCATGTCAGTACAATATCCCCCATTGAAGGGATCGTTGCCAATTTCTTACTCAATTTCTTGCTTAAAGGTGGTACCAAAGGAAGAGGTGGTCACCAGTTCATCCCCTCTTTTTACACCACTCACCAACTTGCAAAAACACAAAATATTCTTTGATCTAATCTTAATTTAGCATCTTGAAGTTGCACAGAATTGAGATAAAAGGAAATTGTCTTTTTCTAGGGCCTTTCATTGTAGACAAGCAACACGAGCATCATTACCAACCCTCTAGAGACACTTCTTGTTCTTATACCCAAAACATGTCTTGTAAAAAGCAAAGAAGTTCAATCATAGAGCCTAGTTTTGAAGGGATCTTGAAAGGGAAAGATGGTAAAGTGGGTAATTAGCGAAAACATAATTAACTGAGATAAGCCTATTCCCTCTGATGTAGGAGATTTGGATCTAGAAATGTATTGAAATTTGAATGAACTTCCCATCCTCTTGAAATGAAAATGCATCATATTGAAAATTTTTCCATGTGAGGTAGGTTGTGCACGGTTTTATCACCTTTGACTATGGCCTTCGTACATTTATGTTAAAGTGATGATTCTTTTCAACGTTGCCTTATTTCTTTCAAATCCTGTTAAAAAATTCAACTTTGAATCTAGCTGCATAATGTTCAACTTTTGTGTATTGGTTTGCTAAGAGGTTGAATTGATTCGGAGGACTGTTTGGTCTATGACATTGTGTCTTTTTGTTAGACAATAGCATCCTTTTCTCTCAGAAAAATCTTAATGGAACCTTTTAATCTTCCTTATTTTATTGAAATGGATTCCTAAGAGACTTCTTGATGTATTTTTTTAGGAGTTGCTTATAATTGGATAAGCTTTTAAAACTGTTTCCCCCCCCCGCCCCCCCCCCCAAATTTAAGAAAGTGTTCGAACATTTCTTTTACAATATGGTCCTATTCATGGTTGTTAAGTTAGGCTCGTGGGGATTGATCACACATTGATGACAAGAAAAACTATAATTGATATTTCTTTTCTGATAACTAGTGAAATAATTTTTCTATTACATACTTACGCAGGAATTTAAGCTTAATCCAAGAGCCAAACTCTTCTCTCCGTCCAATGCAAATATTATACCAGCAAATCATGCAACTCCAGTGGCTGCAAACCTGGCTTACATTTCAAACAACTCACCACCAGTTGTACCTTCGGCTGTTGTTCAACCAGAGTTAGATTTCAGTCCTTTTGTACCTCGTTCATCTGTGCCTGCCGCCAAGTTTGTCCCATATGGCAACTCATTAGCTGGATTTGATGGCAATGTTGCTCAATTTTCTCAACCTGTACGTATTGTTCGAGGTTTCTCTTGATCAGTTTTCCTTTTGTCTTTCTTATCATATCTATTTAGCCTTATGAGGATCTAAATAAGTTCTTCTGTTCTCTATCGCACAACCAAAATGAATTATGGTTAAAACTCAAACTGAATGTATAATTCAGAGTTCCAGCCTAGGAATTTCCCACGTTCAAGAAGGAAATTTTAGGTCTTGTTTATGCGATCAGTTCTTAAAAAATGTACTGTATATTAGGTAACAGATTTAATGATTGGTGAGTATTGAAACCTGAAACTTGTACTTGGCATTTGCATTTGCATTTCCAATGATAATTTAGTTGCCTAAGATTATGTGGTGAGGATACATGGTGGTTATATTACTATTTTAGTCAACCGTCGCACTGAAACTTCATTCTACTCTATTACAACAAGACATGTGTAATTGTCACACGTAGTAATTTAGTTCATTAATTGTATTATAATCATAGTAGGATGATAATAGCATTATGACAATTTCAATGCAATTGTGGTAATAAACTTCTTTCCTGCAACTTTGCTGAGCCAAGTTACCCTTTTATAAACTACAGATGGTGGGACATGTGGGCACCAGGACACAGCCACTTAGATATGTTGGTCAGTATCCTCTCCAGGCTGGCCCGACCTTTGGGCCCCCAAATTCTTCAGCAGTAAGTGGAAACAGGATCATATTTAACCGTTCCATTTAATTTCTTCCCAATAAAGTTGCAATTTGAGTTAGCAGATTGGGGATTCCTCATCCCTATGCTGGCTGTGTTTTTTTTTTCTTTTGGAATATATGAGGTCTCTATGTTTCTCAATAGAAAAAAAATTGTGAACAGATCAGAACGTACCTTAGTTTTTATCCATGACCAGGTCATATTTTGTTGGTAACCTTTGCACTTCTCTTATTGTTACAGGTTATGGTCAGTCGTTTTGGGCAACTTGTTTATATGCAGCCAGTCTCCCATGTAAGTATTTAGTGTCCCATTTGTTAAAAGTATCAACTCTCCTTCCATAAATTCTATTGCTTTGAATTATTTGACCTTGTAGAATTGATCTTTTTCTTCACTTCATGTTTCTTGACGCCATGAGCAGCGTAATATTTACTTCTTGAATTGTGAGTTGTGAAGTAATTTAAATCGGATTATTTCAAGTTCTTTGGTTTTTCCTCTAGGTCAATTCATTGTTTAATCTGTTTTCATTACGTTGCATATCTCTATGCCTCGACTTTCTGTGACCTCTTTCTGGTTCCTGCTACCCTTTTTTAAAATTATTTTTATTCCTTCTCCTGTCCAAATTGCCTATTAACCTCGTCTCATATTTCAGGACTTGGCTCAAGGTGCAACAGTCGTCTCACCGGTACCACCTTGCCCTTTGTTGACAACACAGCCTGCGCAATATCCAAAACATCAAGGTGAATTTTTTTTTCCTGGCTAATGACGAGTATTTCCTTTGCATTGCAAAAAAAAATTATCATAAGCTCCGGTATTTTTTTTTCTCAATTTATTTTTTTATGATGCCGCTGTTTTTATCATAAGTGAGAAGGCAATTACAGTATCAGTTTCGATCGTTAAGATTATGCTACTAAATCCAAACAATACTTCAATTTAAACAACTCGACATTTTTCTTCTTCATTTAAAAGACCTCTACAAATGCAGGCACTGCAGCAGCACAAGCATTGCAGTTTTGCGTTCCTCCGCCATTTATGGCCAGTGGCCACCAACCGCTTGCCGCAGTTCCAAACCACATTCCAATTTTGCAGCCCTCCTCCTTCCCACTCAACCGCCCAATGCCAATGCCAGGAACTAATGCATTCTTCACCACCAAGTTCTAACGAATTTGTTTCTACTGTTAATTTTTCATGTAGTCAACCACAGCTTGGCAAAATTTTGGTCCTCTGAAAGTTTTTTCCTATTTTGATTTAATTATTAGCATTTATCGTTTTATCGGAGGGGGGATGCACTGTTTCCATTCAAAGCAGGACATTTTACCATTGATTGGTGGATGGAGTCTGTTGAACTCTGTATAGGTTGAATTAAAATTTGTTTAGGATCAGCATTATTTCTTTCTTGTGAGGGGAACTCTGAGTCTTTCTCATTCATGAGTTGGTTTCAAATTATAAAAGTTGTTTGGAAAAAATGAAGTCAAGATAGTCTTGTTATTTTAGTGTCCATCTTTAAATAAATGTGATTCCTTGCTGATTCCAATTTTCACTGACCATTTAGTAAATAAAATGTTTAAGATCTGTTCATACCAAATTGTCCCTTGTGACGCGCAGCAACCTTGAAGATTAGAGTACTATTTGTTTCATATGACGAGCAGCAGCCACTTTTTTTGGACAATTTGGCCTTGAAAACTTTTCATTTGCATAAATTCAATCCAACTGCCCAACAAAACCTTATAATTTAAGGACTTTAGCTACTGTCTTTCAAAGGTGAATTGCTCTAGAGCTTCCAATTTTCACTGGACCATTTAGTAAGTATAAAAATGTATAAGATCTGTTCATACCAAAATTGTCCTTTTTCCGTGCTGCAAACGCGCAAGCGAACCGTCACCCTTTGAAGTATAGATACTTTATTGTTGTCAGGTAATTTGAACGACAGCAGCACTTATTTTTGGACCTAATATTGGCACTTGAAAAACTTGTATCATTGCGTAAAATTCAATCAACTTATCACCAATCAGTTAATCCTTTAGATTTTAAGGTGACTTTTTAGCTACGTACTCTCACAAAGGTCGAAATTTCCATAGTGCCAAATTTATCCATACTAAACATTAAAAACGTATAGTATTAAACAT

mRNA sequence

TTCTTCTTCTTCTTCTTCTTCTTCTCCGTTAGATCTTGTTTCTGCAACTCCACCTTTATTTTTTATTCTCACAGAGACGAACACCACCGTTTGATCCAGCTCTCTCACTCTCAGAAACTGGTATATGGGTTGCAGAAACAGGGAGTTTTCGGAGGATGAGACTTGCTCTTCCACGCTCAGCGAGGCCCTGCTCTTTGCCACCATGTGCCTCATTGGCCTGCCCGTTGAGGTTCACATCAAGGATGGCTCTGTCTATTCCGGCATCTTCCACACTGCATGTGTCGAGAATGAATATGGCGTCGTTCTGAAGAAAGCAAGGATGACAAAAAAGGGCAAAAGGAATGTGAATGTCGATGATGGAGTTGTAATTGATACTCTTATCGTTCTTTCTGGTGATCTTGTCCAAGTTGTTGCTACGGAAGTTCTACTTCCGGCTGGTAGTTTTTCCAAAAGTATGGCTGTTTGTGATAACGAATCCATGGTCAATGATCCCACTTCGTTGCTTCCAGCGACAGAGACTAAGACATGTATGGAATCATTCAAGGAGGGGAGTCAGATTAATCAAACAAGTGACCTGATCCAAGATCAAAATGGGTTTGCTCATGGTTCACTGCCTACTGTTACTGGGAAGCAAAGTGATGTTAGACAACTATTGGGAGACAATGTTGAGAACAACAAGGAAGATGCACAACAGAAAAAGGAAAGGTCAAATTGCAAAAAGCCTGAAGGTGTCACTGATGCTGCAATCAATTGGAGACGGGACCCAGATAACCAATTGAAAAAGGAGCAGGATGATCATGGTCAGGAATTTGACTTGCATAAAGGAGCCAATGGTGATCGAGTTCAATCCTCTATATTGAGTGAGAAACCATGCACTGAAAGATCCATCTCAGCCAACACTACAAATGCATATTCAGTTGGTGTCTCAACTTCTTCACGTTCGTCTGTGGATAGTAGCATGGACTCATGTCGCAGTTCTATAACGTCAACGATTGACATGGCCCCTTCTCACGGTTCAGAATCCAATAAAAGTGGCAAGGAATTTAAGCTTAATCCAAGAGCCAAACTCTTCTCTCCGTCCAATGCAAATATTATACCAGCAAATCATGCAACTCCAGTGGCTGCAAACCTGGCTTACATTTCAAACAACTCACCACCAGTTGTACCTTCGGCTGTTGTTCAACCAGAGTTAGATTTCAGTCCTTTTGTACCTCGTTCATCTGTGCCTGCCGCCAAGTTTGTCCCATATGGCAACTCATTAGCTGGATTTGATGGCAATGTTGCTCAATTTTCTCAACCTATGGTGGGACATGTGGGCACCAGGACACAGCCACTTAGATATGTTGGTCAGTATCCTCTCCAGGCTGGCCCGACCTTTGGGCCCCCAAATTCTTCAGCAGTTATGGTCAGTCGTTTTGGGCAACTTGTTTATATGCAGCCAGTCTCCCATGACTTGGCTCAAGGTGCAACAGTCGTCTCACCGGTACCACCTTGCCCTTTGTTGACAACACAGCCTGCGCAATATCCAAAACATCAAGGCACTGCAGCAGCACAAGCATTGCAGTTTTGCGTTCCTCCGCCATTTATGGCCAGTGGCCACCAACCGCTTGCCGCAGTTCCAAACCACATTCCAATTTTGCAGCCCTCCTCCTTCCCACTCAACCGCCCAATGCCAATGCCAGGAACTAATGCATTCTTCACCACCAAGTTCTAACGAATTTGTTTCTACTGTTAATTTTTCATGTAGTCAACCACAGCTTGGCAAAATTTTGGTCCTCTGAAAGTTTTTTCCTATTTTGATTTAATTATTAGCATTTATCGTTTTATCGGAGGGGGGATGCACTGTTTCCATTCAAAGCAGGACATTTTACCATTGATTGGTGGATGGAGTCTGTTGAACTCTGTATAGGTTGAATTAAAATTTGTTTAGGATCAGCATTATTTCTTTCTTGTGAGGGGAACTCTGAGTCTTTCTCATTCATGAGTTGGTTTCAAATTATAAAAGTTGTTTGGAAAAAATGAAGTCAAGATAGTCTTGTTATTTTAGTGTCCATCTTTAAATAAATGTGATTCCTTGCTGATTCCAATTTTCACTGACCATTTAGTAAATAAAATGTTTAAGATCTGTTCATACCAAATTGTCCCTTGTGACGCGCAGCAACCTTGAAGATTAGAGTACTATTTGTTTCATATGACGAGCAGCAGCCACTTTTTTTGGACAATTTGGCCTTGAAAACTTTTCATTTGCATAAATTCAATCCAACTGCCCAACAAAACCTTATAATTTAAGGACTTTAGCTACTGTACTCTCACAAAGGTCGAAATTTCCATAGTGCCAAATTTATCCATACTAAACATTAAAAACGTATAGTATTAAACAT

Coding sequence (CDS)

ATGGGTTGCAGAAACAGGGAGTTTTCGGAGGATGAGACTTGCTCTTCCACGCTCAGCGAGGCCCTGCTCTTTGCCACCATGTGCCTCATTGGCCTGCCCGTTGAGGTTCACATCAAGGATGGCTCTGTCTATTCCGGCATCTTCCACACTGCATGTGTCGAGAATGAATATGGCGTCGTTCTGAAGAAAGCAAGGATGACAAAAAAGGGCAAAAGGAATGTGAATGTCGATGATGGAGTTGTAATTGATACTCTTATCGTTCTTTCTGGTGATCTTGTCCAAGTTGTTGCTACGGAAGTTCTACTTCCGGCTGGTAGTTTTTCCAAAAGTATGGCTGTTTGTGATAACGAATCCATGGTCAATGATCCCACTTCGTTGCTTCCAGCGACAGAGACTAAGACATGTATGGAATCATTCAAGGAGGGGAGTCAGATTAATCAAACAAGTGACCTGATCCAAGATCAAAATGGGTTTGCTCATGGTTCACTGCCTACTGTTACTGGGAAGCAAAGTGATGTTAGACAACTATTGGGAGACAATGTTGAGAACAACAAGGAAGATGCACAACAGAAAAAGGAAAGGTCAAATTGCAAAAAGCCTGAAGGTGTCACTGATGCTGCAATCAATTGGAGACGGGACCCAGATAACCAATTGAAAAAGGAGCAGGATGATCATGGTCAGGAATTTGACTTGCATAAAGGAGCCAATGGTGATCGAGTTCAATCCTCTATATTGAGTGAGAAACCATGCACTGAAAGATCCATCTCAGCCAACACTACAAATGCATATTCAGTTGGTGTCTCAACTTCTTCACGTTCGTCTGTGGATAGTAGCATGGACTCATGTCGCAGTTCTATAACGTCAACGATTGACATGGCCCCTTCTCACGGTTCAGAATCCAATAAAAGTGGCAAGGAATTTAAGCTTAATCCAAGAGCCAAACTCTTCTCTCCGTCCAATGCAAATATTATACCAGCAAATCATGCAACTCCAGTGGCTGCAAACCTGGCTTACATTTCAAACAACTCACCACCAGTTGTACCTTCGGCTGTTGTTCAACCAGAGTTAGATTTCAGTCCTTTTGTACCTCGTTCATCTGTGCCTGCCGCCAAGTTTGTCCCATATGGCAACTCATTAGCTGGATTTGATGGCAATGTTGCTCAATTTTCTCAACCTATGGTGGGACATGTGGGCACCAGGACACAGCCACTTAGATATGTTGGTCAGTATCCTCTCCAGGCTGGCCCGACCTTTGGGCCCCCAAATTCTTCAGCAGTTATGGTCAGTCGTTTTGGGCAACTTGTTTATATGCAGCCAGTCTCCCATGACTTGGCTCAAGGTGCAACAGTCGTCTCACCGGTACCACCTTGCCCTTTGTTGACAACACAGCCTGCGCAATATCCAAAACATCAAGGCACTGCAGCAGCACAAGCATTGCAGTTTTGCGTTCCTCCGCCATTTATGGCCAGTGGCCACCAACCGCTTGCCGCAGTTCCAAACCACATTCCAATTTTGCAGCCCTCCTCCTTCCCACTCAACCGCCCAATGCCAATGCCAGGAACTAATGCATTCTTCACCACCAAGTTCTAA

Protein sequence

MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMVNDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDNVENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRVQSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSESNKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSPFVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGPPNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQFCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF

Homology

[Close]

BLAST of Carg00060 vs. NCBI nr
Match: KAG7031406.1 (Polyadenylate-binding protein-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1037.3 bits (2681), Expect = 4.4e-299
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV
Sbjct: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN
Sbjct: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV
Sbjct: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES
Sbjct: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
           NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP
Sbjct: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP
Sbjct: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
           PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ
Sbjct: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF
Sbjct: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 529

[Close]

BLAST of Carg00060 vs. NCBI nr
Match: KAG6600769.1 (Polyadenylate-binding protein-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1031.2 bits (2665), Expect = 3.2e-297
Identity = 528/529 (99.81%), Postives = 528/529 (99.81%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV
Sbjct: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN
Sbjct: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV
Sbjct: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES
Sbjct: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
           NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP
Sbjct: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP
Sbjct: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
           PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ
Sbjct: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMASGHQPLAAVPNHIPILQP SFPLNRPMPMPGTNAFFTTKF
Sbjct: 481 FCVPPPFMASGHQPLAAVPNHIPILQP-SFPLNRPMPMPGTNAFFTTKF 528

[Close]

BLAST of Carg00060 vs. NCBI nr
Match: XP_022943019.1 (polyadenylate-binding protein-interacting protein 4-like [Cucurbita moschata])

HSP 1 Score: 1030.8 bits (2664), Expect = 4.2e-297
Identity = 524/529 (99.05%), Postives = 528/529 (99.81%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV
Sbjct: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKS+AVCDNESMV
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSLAVCDNESMV 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPTSLLPATETKTCMESFKEGSQINQTSDL+QDQNGFAHGSLPTVTGKQSDVRQLLGDN
Sbjct: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLVQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           VENNK DAQQKKERSNCKKP+GVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV
Sbjct: 181 VENNKGDAQQKKERSNCKKPQGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES
Sbjct: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
           NKSGKEFKLNPRAKLFSPSNANI+PANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP
Sbjct: 301 NKSGKEFKLNPRAKLFSPSNANIMPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP
Sbjct: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
           PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ
Sbjct: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF
Sbjct: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 529

[Close]

BLAST of Carg00060 vs. NCBI nr
Match: XP_023516964.1 (polyadenylate-binding protein-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1027.7 bits (2656), Expect = 3.5e-296
Identity = 525/529 (99.24%), Postives = 526/529 (99.43%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV
Sbjct: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFA GSLPTVTGKQSDVRQLLGDN
Sbjct: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAQGSLPTVTGKQSDVRQLLGDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           VENNK DAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQE DLHKGANGDRV
Sbjct: 181 VENNKGDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEVDLHKGANGDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES
Sbjct: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
           NKSGKEFKLNPRAKLFSPSNANI+PANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP
Sbjct: 301 NKSGKEFKLNPRAKLFSPSNANIMPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP
Sbjct: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
           PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ
Sbjct: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF
Sbjct: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 529

[Close]

BLAST of Carg00060 vs. NCBI nr
Match: XP_022976186.1 (polyadenylate-binding protein-interacting protein 4-like [Cucurbita maxima])

HSP 1 Score: 1025.8 bits (2651), Expect = 1.3e-295
Identity = 522/529 (98.68%), Postives = 526/529 (99.43%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV
Sbjct: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKS+AVCDNESMV
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSLAVCDNESMV 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPTSLLPATETKTCMESFKEGSQINQTSDL+QDQNGFAHGSLPTVTGKQSDVRQLLGDN
Sbjct: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLVQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           VENNK DAQQKKE SNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV
Sbjct: 181 VENNKGDAQQKKEGSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES
Sbjct: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
           NKSGKEFKLNPRAKLFSPSNANI+PANHATPVAANLAYISNNSPPVVPSAV+QPELDFSP
Sbjct: 301 NKSGKEFKLNPRAKLFSPSNANIMPANHATPVAANLAYISNNSPPVVPSAVIQPELDFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP
Sbjct: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
            NSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ
Sbjct: 421 QNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF
Sbjct: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 529

[Close]

BLAST of Carg00060 vs. ExPASy Swiss-Prot
Match: Q8L793 (Polyadenylate-binding protein-interacting protein 3 OS=Arabidopsis thaliana OX=3702 GN=CID3 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-09
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 12  ETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKKARMTKKGK 71
           E+  +   + L++ T C IG  VEVH+K+GSVYSGIFH A VE ++G++LK A + +  +
Sbjct: 42  ESVDTPSQKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAANVEKDFGIILKMACLIRDSR 101

Query: 72  RNVNVDDGVVIDTLIVLSGD-LVQVVATEVLLPAGSFSKSM 112
              +         L+ +  D LVQV+A ++ L + S S S+
Sbjct: 102 GTKSRTVSKPSSKLLKIPADELVQVIAKDLPLSSDSVSDSV 142

[Close]

BLAST of Carg00060 vs. ExPASy Swiss-Prot
Match: Q94AM9 (Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=CID4 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.6e-09
Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 20  EALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKKARMTKKGKRNVNVDDG 79
           + L++ T C IG  VEVH+++GSVY+GIFH A VE ++G++LK A + K G    +    
Sbjct: 47  DRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRS 106

Query: 80  VVI-----DTLIVLSGDLVQVVATEVLLPAGSFSKSM 112
             +      T I+ + +LVQV+A ++ + + + S ++
Sbjct: 107 EFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAV 143

[Close]

BLAST of Carg00060 vs. ExPASy Swiss-Prot
Match: Q55DE7 (Ataxin-2 homolog OS=Dictyostelium discoideum OX=44689 GN=atxn2 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 5.9e-04
Identity = 35/112 (31.25%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 16  STLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVE-----NEYGVVLKKARMTKKG 75
           + + E  +F +M L+G  V V +K+G VY GI HT           +GV LK AR   K 
Sbjct: 79  TAMKERTVFMSMSLVGQNVSVTLKNGDVYEGILHTTSTSTGSSGGGWGVALKMAR---KK 138

Query: 76  KRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMVND 123
             N  V   + +  +I+ + D +Q+ AT V+L    +  S    D +S + D
Sbjct: 139 DTNNRVITTLPLPLVIIEAKDFLQITATGVVL--DHYRDSFMNRDQQSFITD 185

[Close]

BLAST of Carg00060 vs. ExPASy TrEMBL
Match: A0A6J1FT17 (polyadenylate-binding protein-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111447883 PE=4 SV=1)

HSP 1 Score: 1030.8 bits (2664), Expect = 2.0e-297
Identity = 524/529 (99.05%), Postives = 528/529 (99.81%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV
Sbjct: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKS+AVCDNESMV
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSLAVCDNESMV 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPTSLLPATETKTCMESFKEGSQINQTSDL+QDQNGFAHGSLPTVTGKQSDVRQLLGDN
Sbjct: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLVQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           VENNK DAQQKKERSNCKKP+GVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV
Sbjct: 181 VENNKGDAQQKKERSNCKKPQGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES
Sbjct: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
           NKSGKEFKLNPRAKLFSPSNANI+PANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP
Sbjct: 301 NKSGKEFKLNPRAKLFSPSNANIMPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP
Sbjct: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
           PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ
Sbjct: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF
Sbjct: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 529

[Close]

BLAST of Carg00060 vs. ExPASy TrEMBL
Match: A0A6J1IG89 (polyadenylate-binding protein-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111476647 PE=4 SV=1)

HSP 1 Score: 1025.8 bits (2651), Expect = 6.5e-296
Identity = 522/529 (98.68%), Postives = 526/529 (99.43%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV
Sbjct: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKS+AVCDNESMV
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSLAVCDNESMV 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPTSLLPATETKTCMESFKEGSQINQTSDL+QDQNGFAHGSLPTVTGKQSDVRQLLGDN
Sbjct: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLVQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           VENNK DAQQKKE SNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV
Sbjct: 181 VENNKGDAQQKKEGSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES
Sbjct: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
           NKSGKEFKLNPRAKLFSPSNANI+PANHATPVAANLAYISNNSPPVVPSAV+QPELDFSP
Sbjct: 301 NKSGKEFKLNPRAKLFSPSNANIMPANHATPVAANLAYISNNSPPVVPSAVIQPELDFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP
Sbjct: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
            NSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ
Sbjct: 421 QNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF
Sbjct: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 529

[Close]

BLAST of Carg00060 vs. ExPASy TrEMBL
Match: A0A6J1DBR8 (uncharacterized protein LOC111019035 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019035 PE=4 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 1.1e-250
Identity = 453/531 (85.31%), Postives = 483/531 (90.96%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNR+FSEDETCSSTLSEALLFATMCLIGLPVEVH+KDGSVYSGIFHTAC++NEYGVV
Sbjct: 1   MGCRNRDFSEDETCSSTLSEALLFATMCLIGLPVEVHVKDGSVYSGIFHTACLDNEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDG VIDTLIVLSGDLVQVVATEVLLPAGSFSKS+   DNE+M 
Sbjct: 61  LKKARMTKKGKRNVNVDDGAVIDTLIVLSGDLVQVVATEVLLPAGSFSKSLVGYDNEAMA 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           N P SLLP  E KTCMESFKEGSQINQ S+L+QDQNGFAHGS+PT+TGK SDVRQLL DN
Sbjct: 121 NVPVSLLPTVEAKTCMESFKEGSQINQISNLVQDQNGFAHGSVPTITGKHSDVRQLLRDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
           +E+N+ DAQQK+ER NCKKPE  TDAAINWR+DPDNQLK+E+DDH QEFDLHKG N DRV
Sbjct: 181 IESNQGDAQQKRERINCKKPEDATDAAINWRQDPDNQLKREKDDHSQEFDLHKGVNVDRV 240

Query: 241 QSSILSEKPCTERSISANTT-NAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSE 300
           QSSI SEKPC ER  SANTT NA+SVGVSTSS SS+DSSMDSC SSITSTID+A  HGSE
Sbjct: 241 QSSISSEKPCIERPTSANTTPNAFSVGVSTSSLSSIDSSMDSCHSSITSTIDVASPHGSE 300

Query: 301 SNKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFS 360
           SNKS KEFKLNPRAKLFSPS AN + A+ ATPV AN+AYISN+S PVVP AV QPE++FS
Sbjct: 301 SNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAYISNSS-PVVPVAVAQPEVEFS 360

Query: 361 PFVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFG 420
           PFVPRSSVP AKFVPYGNS+AGF GNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFG
Sbjct: 361 PFVPRSSVPPAKFVPYGNSIAGFGGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFG 420

Query: 421 PPNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAA-QA 480
           PPNS AVMV RFGQLVY+ PVSHDLAQG TVVSPV PCPLLTTQPAQYPKHQGTAAA QA
Sbjct: 421 PPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVSPVSPCPLLTTQPAQYPKHQGTAAAQQA 480

Query: 481 LQFCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           LQFCVPPPFMASGHQPLAAVPNHIPILQP SFPLNRPM MPG+NAFF+TKF
Sbjct: 481 LQFCVPPPFMASGHQPLAAVPNHIPILQP-SFPLNRPMQMPGSNAFFSTKF 529

[Close]

BLAST of Carg00060 vs. ExPASy TrEMBL
Match: A0A6J1DB05 (uncharacterized protein LOC111019035 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019035 PE=4 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 1.6e-249
Identity = 453/532 (85.15%), Postives = 484/532 (90.98%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNR+FSEDETCSSTLSEALLFATMCLIGLPVEVH+KDGSVYSGIFHTAC++NEYGVV
Sbjct: 1   MGCRNRDFSEDETCSSTLSEALLFATMCLIGLPVEVHVKDGSVYSGIFHTACLDNEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDG VIDTLIVLSGDLVQVVATEVLLPAGSFSKS+   DNE+M 
Sbjct: 61  LKKARMTKKGKRNVNVDDGAVIDTLIVLSGDLVQVVATEVLLPAGSFSKSLVGYDNEAMA 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQ-TSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGD 180
           N P SLLP  E KTCMESFKEGSQINQ +S+L+QDQNGFAHGS+PT+TGK SDVRQLL D
Sbjct: 121 NVPVSLLPTVEAKTCMESFKEGSQINQISSNLVQDQNGFAHGSVPTITGKHSDVRQLLRD 180

Query: 181 NVENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDR 240
           N+E+N+ DAQQK+ER NCKKPE  TDAAINWR+DPDNQLK+E+DDH QEFDLHKG N DR
Sbjct: 181 NIESNQGDAQQKRERINCKKPEDATDAAINWRQDPDNQLKREKDDHSQEFDLHKGVNVDR 240

Query: 241 VQSSILSEKPCTERSISANTT-NAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGS 300
           VQSSI SEKPC ER  SANTT NA+SVGVSTSS SS+DSSMDSC SSITSTID+A  HGS
Sbjct: 241 VQSSISSEKPCIERPTSANTTPNAFSVGVSTSSLSSIDSSMDSCHSSITSTIDVASPHGS 300

Query: 301 ESNKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDF 360
           ESNKS KEFKLNPRAKLFSPS AN + A+ ATPV AN+AYISN+S PVVP AV QPE++F
Sbjct: 301 ESNKSSKEFKLNPRAKLFSPSVANNMTASPATPVVANVAYISNSS-PVVPVAVAQPEVEF 360

Query: 361 SPFVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTF 420
           SPFVPRSSVP AKFVPYGNS+AGF GNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTF
Sbjct: 361 SPFVPRSSVPPAKFVPYGNSIAGFGGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTF 420

Query: 421 GPPNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAA-Q 480
           GPPNS AVMV RFGQLVY+ PVSHDLAQG TVVSPV PCPLLTTQPAQYPKHQGTAAA Q
Sbjct: 421 GPPNSQAVMVGRFGQLVYVHPVSHDLAQGTTVVSPVSPCPLLTTQPAQYPKHQGTAAAQQ 480

Query: 481 ALQFCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           ALQFCVPPPFMASGHQPLAAVPNHIPILQP SFPLNRPM MPG+NAFF+TKF
Sbjct: 481 ALQFCVPPPFMASGHQPLAAVPNHIPILQP-SFPLNRPMQMPGSNAFFSTKF 530

[Close]

BLAST of Carg00060 vs. ExPASy TrEMBL
Match: A0A0A0L531 (SM-ATX domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077680 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 1.2e-233
Identity = 426/529 (80.53%), Postives = 455/529 (86.01%), Query Frame = 0


Query: 1   MGCRNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVV 60
           MGCRNR+FSEDET SSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACV+NEYGVV
Sbjct: 1   MGCRNRDFSEDETSSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVDNEYGVV 60

Query: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMV 120
           LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEV+LPAGSFSKS+A CDNES  
Sbjct: 61  LKKARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVILPAGSFSKSLAGCDNESKA 120

Query: 121 NDPTSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDN 180
           NDPT L P T  KTC ESFKEGSQ+NQTSDL++DQNGFA GS+PT+TGK +DVRQLL DN
Sbjct: 121 NDPTLLHPTTAAKTCTESFKEGSQVNQTSDLVEDQNGFARGSVPTLTGKLNDVRQLLQDN 180

Query: 181 VENNKEDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRV 240
            ENN+ D  QK+E+ NCKK E V+DA INWR+DPDNQLKKEQDDHGQEFDL K  N DRV
Sbjct: 181 AENNQGDGHQKREKINCKKLEDVSDAGINWRQDPDNQLKKEQDDHGQEFDLQKVVNVDRV 240

Query: 241 QSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSES 300
           QSS+ SEKP TE   +  TTNA+SVGVSTSS SSVDSSMDSC SS++ T D+ PSH    
Sbjct: 241 QSSLSSEKPSTETISATTTTNAFSVGVSTSSHSSVDSSMDSCHSSMSLTTDITPSH---- 300

Query: 301 NKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSP 360
               KEFKLNPRAKLFSPS AN + A  A PVAAN+AYI NNS PV+P  V QPE++FSP
Sbjct: 301 ----KEFKLNPRAKLFSPSVANSMSATPAAPVAANVAYIPNNS-PVLPVPVAQPEVEFSP 360

Query: 361 FVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQYPLQAGPTFGP 420
           FVPRS VPAAKFVPYGNS++GF GNV QFSQPMVGHVGTRTQPLRYV QYPLQAGPTFGP
Sbjct: 361 FVPRSPVPAAKFVPYGNSISGFGGNVPQFSQPMVGHVGTRTQPLRYVSQYPLQAGPTFGP 420

Query: 421 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQGTAAAQALQ 480
           PNSSAVMV RFGQLVYMQP SHDLA G TVVSPV PCPLLT QPAQYPKHQGTAA QALQ
Sbjct: 421 PNSSAVMVGRFGQLVYMQPFSHDLAHGTTVVSPVQPCPLLTAQPAQYPKHQGTAATQALQ 480

Query: 481 FCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           FCVPPPFMA GHQ LAAVPN IPILQP  FPLNRPM +PGTNAFF TKF
Sbjct: 481 FCVPPPFMAGGHQSLAAVPNQIPILQP-PFPLNRPMQVPGTNAFFNTKF 519

[Close]

BLAST of Carg00060 vs. TAIR 10
Match: AT5G54920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 275.0 bits (702), Expect = 1.2e-73
Identity = 196/536 (36.57%), Postives = 284/536 (52.99%), Query Frame = 0


Query: 9   SEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKKARMTK 68
           S   + SS+L+EALL +TMC+IGL V VHI DGSV+SGIF+T  +ENE+ +VLK A++TK
Sbjct: 14  SSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLENEFSIVLKNAKLTK 73

Query: 69  KGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMVNDPTSLLP 128
           KG+   NV+ G +++TL++LS ++VQ+VA  V L     S      + E++V        
Sbjct: 74  KGRSKSNVESGKIVETLVILSSNIVQIVAEGVSLS----SNVAGEIEGENVV-------- 133

Query: 129 ATETKTCMESFKEGSQ---INQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDNVENNK 188
              +   + SF  G      N+  +  + +N     +    +G+ +   +  G   EN  
Sbjct: 134 ---SAVAVSSFNSGKNRRGTNRRRNSAKRENCLESKARTLTSGETAGAMKEPGRRDENKY 193

Query: 189 EDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRVQSSIL 248
             +    +R           A +   ++     KK  D H QE ++   ++   + +   
Sbjct: 194 HPSSLNHQR----------QAGVRILKNS----KKITDVH-QEDNVEARSSSCSLDNMSE 253

Query: 249 SEKPCTERSISANTTNAY--------SVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHG 308
             KP  +  +   ++N +        S   S+S  ++VD + +     + ST  + P+  
Sbjct: 254 RVKPIEQEKMPEPSSNGFHDATERPSSTENSSSQSTTVDENSEVSLVLVVSTNSLPPTQA 313

Query: 309 SESNKSGKEFKLNPRAKLFSPSNANIIPANHA--TPVAANLAYISNNSPPVVPSAVVQPE 368
           ++ +K  KEFKLNP AK FSPS A  + + HA  TPV AN+ Y+ +N+P +     VQPE
Sbjct: 314 TDPDKKAKEFKLNPGAKTFSPSLAKRLTSAHAGMTPVVANMGYVPSNTPMLPVPEAVQPE 373

Query: 369 LDFSPFVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQY-PLQA 428
           +  SPF+  +S P +KFVPY N   G  G  + F Q MVG    R QP R+  QY  +Q 
Sbjct: 374 IGISPFLSHASSP-SKFVPYTNLATGNAGGGSHFPQHMVGPTINRGQPHRFTTQYHSVQP 433

Query: 429 GPTFGPPNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQG-T 488
            P    PN   VMV R GQL+YMQP+S DL QGA   S +PP PL T Q  QYPKHQ   
Sbjct: 434 TPMLVNPNPQ-VMVGRSGQLMYMQPISQDLVQGAPHNSHLPPRPLFTPQQFQYPKHQSLI 493

Query: 489 AAAQALQFCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           A  Q +    P PF A+GHQP   +P  IP++Q S FP+NR MP+P  N F+ TKF
Sbjct: 494 ATGQPMHLYAPQPFAANGHQPYTVMPTDIPVMQ-SPFPINRAMPIPVPNGFYGTKF 516

[Close]

BLAST of Carg00060 vs. TAIR 10
Match: AT5G54920.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 272.7 bits (696), Expect = 6.2e-73
Identity = 196/536 (36.57%), Postives = 282/536 (52.61%), Query Frame = 0


Query: 9   SEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKKARMTK 68
           S   + SS+L+EALL +TMC+IGL V VHI DGSV+SGIF+T  +ENE+ +VLK A++TK
Sbjct: 14  SSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLENEFSIVLKNAKLTK 73

Query: 69  KGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMVNDPTSLLP 128
           KG+   NV+ G +++TL++LS ++VQ+VA  V L     S      + E++V        
Sbjct: 74  KGRSKSNVESGKIVETLVILSSNIVQIVAEGVSLS----SNVAGEIEGENVV-------- 133

Query: 129 ATETKTCMESFKEGSQ---INQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDNVENNK 188
              +   + SF  G      N+  +  + +N     +    +G+ +   +  G   E   
Sbjct: 134 ---SAVAVSSFNSGKNRRGTNRRRNSAKRENCLESKARTLTSGETAGAMKEPGRRDEVGI 193

Query: 189 EDAQQKKERSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRVQSSIL 248
              +      N ++  GV               KK  D H QE ++   ++   + +   
Sbjct: 194 LQNKYHPSSLNHQRQAGVRIL---------KNSKKITDVH-QEDNVEARSSSCSLDNMSE 253

Query: 249 SEKPCTERSISANTTNAY--------SVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHG 308
             KP  +  +   ++N +        S   S+S  ++VD + +     + ST  + P+  
Sbjct: 254 RVKPIEQEKMPEPSSNGFHDATERPSSTENSSSQSTTVDENSEVSLVLVVSTNSLPPTQA 313

Query: 309 SESNKSGKEFKLNPRAKLFSPSNANIIPANHA--TPVAANLAYISNNSPPVVPSAVVQPE 368
           ++ +K  KEFKLNP AK FSPS A  + + HA  TPV AN+ Y+ +N+P +     VQPE
Sbjct: 314 TDPDKKAKEFKLNPGAKTFSPSLAKRLTSAHAGMTPVVANMGYVPSNTPMLPVPEAVQPE 373

Query: 369 LDFSPFVPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQY-PLQA 428
           +  SPF+  +S P +KFVPY N   G  G  + F Q MVG    R QP R+  QY  +Q 
Sbjct: 374 IGISPFLSHASSP-SKFVPYTNLATGNAGGGSHFPQHMVGPTINRGQPHRFTTQYHSVQP 433

Query: 429 GPTFGPPNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQG-T 488
            P    PN   VMV R GQL+YMQP+S DL QGA   S +PP PL T Q  QYPKHQ   
Sbjct: 434 TPMLVNPNPQ-VMVGRSGQLMYMQPISQDLVQGAPHNSHLPPRPLFTPQQFQYPKHQSLI 493

Query: 489 AAAQALQFCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFTTKF 530
           A  Q +    P PF A+GHQP   +P  IP++Q S FP+NR MP+P  N F+ TKF
Sbjct: 494 ATGQPMHLYAPQPFAANGHQPYTVMPTDIPVMQ-SPFPINRAMPIPVPNGFYGTKF 521

[Close]

BLAST of Carg00060 vs. TAIR 10
Match: AT4G26990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-63
Identity = 187/527 (35.48%), Postives = 273/527 (51.80%), Query Frame = 0


Query: 4   RNREFSEDETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKK 63
           R  E  ++   + + S  L+ ATMC+IGL V VH+KDGSV+SGIF TA V+N +G+VLK 
Sbjct: 5   RKVEDDDNNNNNKSSSSVLIAATMCIIGLQVHVHVKDGSVFSGIFFTASVDNGFGIVLKD 64

Query: 64  ARMTKKGKRNVNVDDGVVIDTLIVLSGDLVQVVATEVLLPAGSFSKSMAVCDNESMVNDP 123
           AR+TKKG    NV  G V+DTL++LS  +VQ++A  V LP+     ++   +NE  V   
Sbjct: 65  ARITKKGTSISNVASGSVVDTLVILSSTIVQIIAEGVSLPS-----NVTTANNE--VGSA 124

Query: 124 TSLLPATETKTCMESFKEGSQINQTSDLIQDQNGFAHGSLPTVTGKQSDVRQLLGDNVEN 183
           T  LP +E + C          N+++++     GF H        K+    Q+L  +V+ 
Sbjct: 125 TETLP-SEPRLC--------AANKSTNVSTQGRGFNH--------KRQAGAQILKRSVQI 184

Query: 184 NKEDAQQKKE-RSNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHKGANGDRVQS 243
            +   Q   + +S+    + +++           ++K  ++D+     L  G +      
Sbjct: 185 PEVYQQDNIDIQSSSSSLDSMSE-----------RVKPIEEDNLMPEPLSNGFHN----- 244

Query: 244 SILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMAPSHGSESNK 303
              + KP +  ++ + +T              VD +++ CR  + ++     S   ++ K
Sbjct: 245 --AAAKPSSTDNLLSEST-------------PVDDTLELCRGRVAAS--STASVPIQAVK 304

Query: 304 SGKEFKLNPRAKLFSPS-NANIIPANHATPVAANLAYISNNSPPVVPSAVVQPELDFSPF 363
             KEFKLNP AK+FSPS    + P+    P   N+AYI +N+P +     + PE+  +P+
Sbjct: 305 KPKEFKLNPEAKIFSPSYTKRLSPSPVGMPHVGNIAYIPSNTPMLPVPEAIYPEVVNNPY 364

Query: 364 VPRSSVPAAKFVPYGNSLAGFDGNVAQFSQPMVGHVGTRTQPLRYVGQY-PLQAGPTFGP 423
           VP++  P +KFVPYGN  AG      QF Q M+G    R QP RY  QY  +QA P    
Sbjct: 365 VPQAP-PPSKFVPYGNVTAGHAVGGFQFPQHMIGPTVNRAQPQRYTAQYHSVQAAPMLVN 424

Query: 424 PNSSAVMVSRFGQLVYMQPVSHDLAQGATVVSPVPPCPLLTTQPAQYPKHQG-TAAAQAL 483
           P S  VMV+R GQLVY+Q VS DL QG   +SP+  CPL T Q  QY KHQG  AA Q L
Sbjct: 425 P-SPQVMVARSGQLVYVQSVSQDLVQGTPPLSPMLSCPLPTAQHVQYLKHQGVVAAGQPL 471

Query: 484 QFCVPPPFMASGHQPLAAVPNHIPILQPSSFPLNRPMPMPGTNAFFT 527
             CV  PF   G QP   +P   P +Q   FP N+PM +   N F+T
Sbjct: 485 PLCVSLPFTTGGPQPY-GIPTQFPAMQQPPFPTNQPMTVAVPNGFYT 471

[Close]

BLAST of Carg00060 vs. TAIR 10
Match: AT1G54170.1 (CTC-interacting domain 3 )

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-10
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 12  ETCSSTLSEALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKKARMTKKGK 71
           E+  +   + L++ T C IG  VEVH+K+GSVYSGIFH A VE ++G++LK A + +  +
Sbjct: 42  ESVDTPSQKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAANVEKDFGIILKMACLIRDSR 101

Query: 72  RNVNVDDGVVIDTLIVLSGD-LVQVVATEVLLPAGSFSKSM 112
              +         L+ +  D LVQV+A ++ L + S S S+
Sbjct: 102 GTKSRTVSKPSSKLLKIPADELVQVIAKDLPLSSDSVSDSV 142

HSP 2 Score: 30.0 bits (66), Expect = 7.0e+00
Identity = 65/246 (26.42%), Postives = 98/246 (39.84%), Query Frame = 0


Query: 178 GDNVENNKEDAQQKKER----SNCKKPEGVTDAAINWRRDPDNQLKKEQDDHGQEFDLHK 237
           G+N+ N  +  +Q+K +    S  KKP   ++ +++   D    +K          D   
Sbjct: 365 GNNIRNESQLGEQRKSKFLGASLFKKP---SEESVSGFEDAPPPVKP------SFIDGRL 424

Query: 238 GANGDRVQSSILSEKPCTERSISANTTNAYSVGVSTSSRSSVDSSMDSCRSSITSTIDMA 297
           G   DR +S   S  P +  SIS N+ N  S   S S+   +  S     SS  ST+   
Sbjct: 425 GLLSDRAKSENSSGWPGS--SISRNSEN--SAASSASNLPILSPSSSGSLSSEKSTL--- 484

Query: 298 PSHGSESNKSGKEFKLNPRAKLFSPSNANIIPANHATPVAANLAYISNNSPPVVPSAVVQ 357
                  N + KEFKLNP AK F PS +   P +  +PV     Y     PPV P   + 
Sbjct: 485 -------NPNAKEFKLNPNAKSFKPSPSATRPQSPQSPVFDGSFYY----PPVPPMPGLH 544

Query: 358 PELDFSPFVPRSSVPAAKFVPYGNSL------AGFDGNVAQFSQPMVGHVGTRTQPLRYV 414
                    P    P    + Y N+         +  N  Q+ QPM   + T+ +P+ ++
Sbjct: 545 IRYGTGAAFPGQQHP----MMYNNTTQLSPNQTYYSPNSPQYPQPM---MVTQQRPILFM 576

[Close]

BLAST of Carg00060 vs. TAIR 10
Match: AT3G14010.1 (CTC-interacting domain 4 )

HSP 1 Score: 64.7 bits (156), Expect = 2.6e-10
Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 20  EALLFATMCLIGLPVEVHIKDGSVYSGIFHTACVENEYGVVLKKARMTKKGKRNVNVDDG 79
           + L++ T C IG  VEVH+++GSVY+GIFH A VE ++G++LK A + K G    +    
Sbjct: 47  DRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRS 106

Query: 80  VVI-----DTLIVLSGDLVQVVATEVLLPAGSFSKSM 112
             +      T I+ + +LVQV+A ++ + + + S ++
Sbjct: 107 EFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAV 143

The following BLAST results are available for this feature:

BLAST of Carg00060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031406.1	4.4e-299	100.00	Polyadenylate-binding protein-interacting protein 4 [Cucurbita argyrosperma subs...	[more]
KAG6600769.1	3.2e-297	99.81	Polyadenylate-binding protein-interacting protein 4, partial [Cucurbita argyrosp...	[more]
XP_022943019.1	4.2e-297	99.05	polyadenylate-binding protein-interacting protein 4-like [Cucurbita moschata]	[more]
XP_023516964.1	3.5e-296	99.24	polyadenylate-binding protein-interacting protein 4-like [Cucurbita pepo subsp. ...	[more]
XP_022976186.1	1.3e-295	98.68	polyadenylate-binding protein-interacting protein 4-like [Cucurbita maxima]	[more]

BLAST of Carg00060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L793	2.1e-09	37.62	Polyadenylate-binding protein-interacting protein 3 OS=Arabidopsis thaliana OX=3...	[more]
Q94AM9	3.6e-09	35.05	Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana OX=3...	[more]
Q55DE7	5.9e-04	31.25	Ataxin-2 homolog OS=Dictyostelium discoideum OX=44689 GN=atxn2 PE=3 SV=1	[more]

BLAST of Carg00060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT17	2.0e-297	99.05	polyadenylate-binding protein-interacting protein 4-like OS=Cucurbita moschata O...	[more]
A0A6J1IG89	6.5e-296	98.68	polyadenylate-binding protein-interacting protein 4-like OS=Cucurbita maxima OX=...	[more]
A0A6J1DBR8	1.1e-250	85.31	uncharacterized protein LOC111019035 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DB05	1.6e-249	85.15	uncharacterized protein LOC111019035 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0L531	1.2e-233	80.53	SM-ATX domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077680 PE=4...	[more]

BLAST of Carg00060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54920.1	1.2e-73	36.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G54920.2	6.2e-73	36.57	unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thal...	[more]
AT4G26990.1	1.2e-63	35.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G54170.1	1.5e-10	37.62	CTC-interacting domain 3	[more]
AT3G14010.1	2.6e-10	35.05	CTC-interacting domain 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 178..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..235
None	No IPR available	PANTHER	PTHR12854:SF12	POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN	coord: 1..526
IPR025852	Ataxin 2, SM domain	PFAM	PF14438	SM-ATX	coord: 20..97 e-value: 7.7E-23 score: 80.5
IPR045117	Ataxin2-like	PANTHER	PTHR12854	ATAXIN 2-RELATED	coord: 1..526

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00060-RA	Carg00060-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034063	stress granule assembly
cellular_component	GO:0010494	cytoplasmic stress granule
molecular_function	GO:0003723	RNA binding