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Carg00043 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCTCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGACCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAACCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTCCCTGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTGCAAGGCTCAACCCAAAGGTAAATCATCCTCTTCGATTAGTTTATTGTTGATTATTGTGTTCAATGTTAGATCCATCTTGGGTTTTGATGATTTAAGATTCCATATTCATATTCATATTGATGTTTGTGTATGATTGATTGGGATTCGCAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAG ATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCTCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGACCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAACCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTCCCTGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTGCAAGGCTCAACCCAAAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAG ATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCTCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGACCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAACCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTCCCTGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTGCAAGGCTCAACCCAAAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAG MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR Homology
BLAST of Carg00043 vs. NCBI nr
Match: KAG6600749.1 (hypothetical protein SDJN03_05982, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031389.1 hypothetical protein SDJN02_05429, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of Carg00043 vs. NCBI nr
Match: XP_022942558.1 (uncharacterized protein LOC111447556 [Cucurbita moschata]) HSP 1 Score: 328.2 bits (840), Expect = 4.3e-86 Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of Carg00043 vs. NCBI nr
Match: XP_022992944.1 (uncharacterized protein LOC111489122 [Cucurbita maxima]) HSP 1 Score: 325.5 bits (833), Expect = 2.8e-85 Identity = 167/169 (98.82%), Postives = 167/169 (98.82%), Query Frame = 0
BLAST of Carg00043 vs. NCBI nr
Match: XP_023546381.1 (uncharacterized protein LOC111805505 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79 Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0
BLAST of Carg00043 vs. NCBI nr
Match: XP_038905336.1 (uncharacterized protein LOC120091403 [Benincasa hispida]) HSP 1 Score: 282.0 bits (720), Expect = 3.5e-72 Identity = 148/166 (89.16%), Postives = 153/166 (92.17%), Query Frame = 0
BLAST of Carg00043 vs. ExPASy TrEMBL
Match: A0A6J1FV48 (uncharacterized protein LOC111447556 OS=Cucurbita moschata OX=3662 GN=LOC111447556 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86 Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0
BLAST of Carg00043 vs. ExPASy TrEMBL
Match: A0A6J1JYV3 (uncharacterized protein LOC111489122 OS=Cucurbita maxima OX=3661 GN=LOC111489122 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.3e-85 Identity = 167/169 (98.82%), Postives = 167/169 (98.82%), Query Frame = 0
BLAST of Carg00043 vs. ExPASy TrEMBL
Match: A0A5A7VEX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001090 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 9.6e-68 Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0
BLAST of Carg00043 vs. ExPASy TrEMBL
Match: A0A1S3BUE7 (uncharacterized protein LOC103493397 OS=Cucumis melo OX=3656 GN=LOC103493397 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 9.6e-68 Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0
BLAST of Carg00043 vs. ExPASy TrEMBL
Match: A0A0A0L572 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088990 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67 Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0
BLAST of Carg00043 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 189.9 bits (481), Expect = 1.7e-48 Identity = 97/152 (63.82%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of Carg00043 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 159.8 bits (403), Expect = 1.9e-39 Identity = 83/148 (56.08%), Postives = 108/148 (72.97%), Query Frame = 0
BLAST of Carg00043 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24 Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 0
BLAST of Carg00043 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 ) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24 Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 0
BLAST of Carg00043 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 109.0 bits (271), Expect = 3.8e-24 Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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