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Carg00037 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAGAGCGCAGCTTGCAGAGCGTGGTTCGTGGCCGCGAGCATCGGCGCCGTCGAGGCCTCGAAGGATCAAGGCGTCTGCCGGTGGAACAACGTCATCAAATCTCTCCAACAACACGGAAAGACCAAGCTCAGATCTTACTACCAAGCCAAGAAGATCTCTGCTTCCTCTTCTTCAGCCATTGGCAACCAAATGAAGAGGTCTCGCGAGGAAAAAATGAGGAAAGTCATGGACTTGAGCTGTTTGGGTCCCAGTACCATCAGATTCTAG ATGTCGAAGAGCGCAGCTTGCAGAGCGTGGTTCGTGGCCGCGAGCATCGGCGCCGTCGAGGCCTCGAAGGATCAAGGCGTCTGCCGGTGGAACAACGTCATCAAATCTCTCCAACAACACGGAAAGACCAAGCTCAGATCTTACTACCAAGCCAAGAAGATCTCTGCTTCCTCTTCTTCAGCCATTGGCAACCAAATGAAGAGGTCTCGCGAGGAAAAAATGAGGAAAGTCATGGACTTGAGCTGTTTGGGTCCCAGTACCATCAGATTCTAG ATGTCGAAGAGCGCAGCTTGCAGAGCGTGGTTCGTGGCCGCGAGCATCGGCGCCGTCGAGGCCTCGAAGGATCAAGGCGTCTGCCGGTGGAACAACGTCATCAAATCTCTCCAACAACACGGAAAGACCAAGCTCAGATCTTACTACCAAGCCAAGAAGATCTCTGCTTCCTCTTCTTCAGCCATTGGCAACCAAATGAAGAGGTCTCGCGAGGAAAAAATGAGGAAAGTCATGGACTTGAGCTGTTTGGGTCCCAGTACCATCAGATTCTAG MSKSAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSSAIGNQMKRSREEKMRKVMDLSCLGPSTIRF Homology
BLAST of Carg00037 vs. NCBI nr
Match: KAG7031383.1 (hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176.4 bits (446), Expect = 1.1e-40 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Carg00037 vs. NCBI nr
Match: XP_022942717.1 (uncharacterized protein LOC111447671 [Cucurbita moschata] >XP_022942718.1 uncharacterized protein LOC111447671 [Cucurbita moschata]) HSP 1 Score: 174.5 bits (441), Expect = 4.2e-40 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg00037 vs. NCBI nr
Match: XP_022993930.1 (uncharacterized protein LOC111489778 [Cucurbita maxima]) HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39 Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Carg00037 vs. NCBI nr
Match: XP_023538267.1 (uncharacterized protein LOC111799095 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171.0 bits (432), Expect = 4.6e-39 Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Carg00037 vs. NCBI nr
Match: XP_038877273.1 (uncharacterized protein LOC120069557 [Benincasa hispida]) HSP 1 Score: 164.9 bits (416), Expect = 3.3e-37 Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of Carg00037 vs. ExPASy TrEMBL
Match: A0A6J1FVH7 (uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC111447671 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.0e-40 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg00037 vs. ExPASy TrEMBL
Match: A0A6J1JZW3 (uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39 Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Carg00037 vs. ExPASy TrEMBL
Match: A0A0A0L594 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 4.7e-37 Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Carg00037 vs. ExPASy TrEMBL
Match: A0A5A7TZR6 (Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00840 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35 Identity = 79/90 (87.78%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of Carg00037 vs. ExPASy TrEMBL
Match: A0A6J1JD67 (uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.6e-35 Identity = 78/90 (86.67%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Carg00037 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15 Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0
BLAST of Carg00037 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 73.9 bits (180), Expect = 7.2e-14 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Carg00037 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein ) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08 Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of Carg00037 vs. TAIR 10
Match: AT2G14070.1 (wound-responsive protein-related ) HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04 Identity = 35/100 (35.00%), Postives = 50/100 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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