CaUC11G218360 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G218360
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	NADH dehydrogenase subunit 7
Location	Ciama_Chr11: 32011889 .. 32013907 (+)
RNA-Seq Expression	CaUC11G218360
Synteny	CaUC11G218360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTGGAATCTGGAACGAGGTGTTGTTATATTTTCACTTGGAAGTACTGAAGATTCCAAAGACGAAAAGCTAGCTGCAGGTGCTGCTGCATATATGAAGGTGCGGGGGGAGGGTAACTGGTGAAGGCTTTCTGAGCTCATCAATAGAGTGAGGAATGAATATGTTAATGGAGTTTTTTGGACTTCGAAATGAAATGTGGGTTAGCAGAAAATACTGTCCTGTGTTTTAAGACATTGAAACGAATACTTCTACGTAATAATGTTCGGTTTGGTTAATTTTTGGGGCTTTCCCCCGTCTCCTGATTATCAAACCATGTGAGTCAGCTTCAGTTGCATTTTTGTACATAGGAAATATGATGCTATCTTTTTTCACCATCTTGATTGCAGGGGTCTCTTTTTGTATTGGGTTGTCAATGACAATTGGGGAGGAAGAAGCTCAAACACCTTCCATCCTTCCAATGTAAATGTAATATTTATGAATTATGTATTGATTTGGATTTTGGAGATACTGCTTTCCCCTCCCGTTTCTTGTAATAACTGCTAACAAGTGAATGGGTTCAGACAAGTAGGATTCTTTTTTCATGTGTTTAAGAATAATGTGGGTTGAATGTTGACGGATGTGTTGGATTTTAATGGGATGTGCAATATCCGTATGTTAGACTGGTAAATTTGAACTGGTTTGTCTTCTACAATCATTGTAAATAAGGTCACTTGGTGCTTCGACTTTTAAAAGTAACGGTTTAGTGAGTTTAGTCTCTAGTGTTGAAGTTGTTAAAATTTGACACAAGTCTGAGGTGGTTGTCATCTATGATCTATGTGTACAAATTAATAGTTAAGTACATGCAAATTTTGAAACGACTCGAGCTTGGGCTCAGGTTGGTTTAAAATTGAACCGTTAATGATTTTTCAAAATTGAAAAAGCTAGGCTTTCACGATTGAATGAGGGATGCGTTTCTTTTTTCTTTTGATTTCACTCCCTTCCCTTCCTTGCAATCAATACTATTACGAGATTGGTTTCAAATCGGCATCAAAGCTTGAAGGAGATTTCATCAAAGCTTGGGCTCGTTTTGCTTTTCTGTCTAAGGCTCTTTTGGAGTGGAATGAATTCAGCTAATGTGCACAGAGTTTAGATGAAATCTGGGTTGACCTTAGGGCTGCTGTCTCTCATGCTACTGCGGAATTGGGGTTCGCAACAACTTTGACAAATTTCTGCAAGAGCTGGCAAATCATCCACTCTTCCCTGAAGCAAAGCAGGTTAACATTGAAAAGTTGCGTCAAGTGCCTAGGTTTGTAGAAAAAAAAAATTGAATTAGAAGATGAGTTCTGCCGCGCAGAAACTTTTTCTTATTCTATGGCGTGCTTTTTTTTGAGCCGCATTCATTGCTTTGAGGGATTGGTTGTGAGCAAGGAAGATTTGAGTTGGGCGCGTAAGGTGTTGGGTGGTGGGTTTTCGATGGATACAACTTTGATTGCTTTTCACCAGTTTATATAATGAATATTTGTTTATACCATTTACATTGATAATTGTAGACAGATGGATAGCAATGGTAGTGAAGAGCTTTCCTTTCCTAGGGCCAACCTAGAAAGAAAGAGGGTCATATTCTTGTGTAACTTTTGTCATCCCGTTCATTGTGGTTCCTCGGCCCTCNACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAG

mRNA sequence

ATGGAGTGGAATCTGGAACGAGGTGTTGTTATATTTTCACTTGGAAGTACTGAAGATTCCAAAGACGAAAAGCTAGCTGCAGGTGCTGCTGCATATATGAAGAGTTTAGATGAAATCTGGGTTGACCTTAGGGCTGCTGTCTCTCATGCTACTGCGGAATTGGGGTTCGCAACAACTTTGACAAATTTCTGCAAGAGCTGGCAAATCATCCACTCTTCCCTGAAGCAAAGCAGACAGATGGATAGCAATGGTAGTGAAGAGCTTTCCTTTCCTAGGGCCAACCTAGAAAGAAAGAGGGTCATATTCTTGTGTAACTTTTGTCATCCCGTTCATTGTGGTTCCTCGGCCCTCNACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAG

Coding sequence (CDS)

ATGGAGTGGAATCTGGAACGAGGTGTTGTTATATTTTCACTTGGAAGTACTGAAGATTCCAAAGACGAAAAGCTAGCTGCAGGTGCTGCTGCATATATGAAGAGTTTAGATGAAATCTGGGTTGACCTTAGGGCTGCTGTCTCTCATGCTACTGCGGAATTGGGGTTCGCAACAACTTTGACAAATTTCTGCAAGAGCTGGCAAATCATCCACTCTTCCCTGAAGCAAAGCAGACAGATGGATAGCAATGGTAGTGAAGAGCTTTCCTTTCCTAGGGCCAACCTAGAAAGAAAGAGGGTCATATTCTTGTGTAACTTTTGTCATCCCGTTCATTGTGGTTCCTCGGCCCTCNACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAG

Protein sequence

MEWNLERGVVIFSLGSTEDSKDEKLAAGAAAYMKSLDEIWVDLRAAVSHATAELGFATTLTNFCKSWQIIHSSLKQSRQMDSNGSEELSFPRANLERKRVIFLCNFCHPVHCGSSALXVRFGERWDRQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR

Homology

[Close]

BLAST of CaUC11G218360 vs. NCBI nr
Match: KAG8362771.1 (hypothetical protein BUALT_BualtUnG0042100 [Buddleja alternifolia] >KAG8363164.1 hypothetical protein BUALT_BualtMtG0003100 [Buddleja alternifolia])

HSP 1 Score: 221.5 bits (563), Expect = 7.9e-54
Identity = 114/123 (92.68%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 119 VRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAV 178
           VRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPASSTYTAV
Sbjct: 446 VRFGERWDRLYNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPASSTYTAV 505

Query: 179 EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 238
           EAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDIVSGE
Sbjct: 506 EAPKGEFGVFLVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 565

Query: 239 VDR 240
           VDR
Sbjct: 566 VDR 567

[Close]

BLAST of CaUC11G218360 vs. NCBI nr
Match: XP_016435338.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana tabacum])

HSP 1 Score: 219.5 bits (558), Expect = 3.0e-53
Identity = 113/123 (91.87%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 119 VRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAV 178
           VRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYTAV
Sbjct: 80  VRFGERWDRLYNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPAPSTYTAV 139

Query: 179 EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 238
           EAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDIVSGE
Sbjct: 140 EAPKGEFGVFLVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 199

Query: 239 VDR 240
           VDR
Sbjct: 200 VDR 201

[Close]

BLAST of CaUC11G218360 vs. NCBI nr
Match: XP_022897754.1 (uncharacterized protein LOC111411454 [Olea europaea var. sylvestris])

HSP 1 Score: 219.2 bits (557), Expect = 3.9e-53
Identity = 113/123 (91.87%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 119 VRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAV 178
           VRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPASSTYTAV
Sbjct: 6   VRFGERWDRLYNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPASSTYTAV 65

Query: 179 EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 238
           EAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDIV GE
Sbjct: 66  EAPKGEFGVFLVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDIVFGE 125

Query: 239 VDR 240
           VDR
Sbjct: 126 VDR 127

[Close]

BLAST of CaUC11G218360 vs. NCBI nr
Match: QVJ97872.1 (hypothetical protein [Apium graveolens] >QVJ98117.1 hypothetical protein [Apium graveolens])

HSP 1 Score: 219.2 bits (557), Expect = 3.9e-53
Identity = 113/123 (91.87%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 119 VRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAV 178
           VRFGERWDR     +RCKLFLSIAGQMTT  SSVYSTSIHHFE YTEGFSVPA STYTAV
Sbjct: 7   VRFGERWDRLYNRGSRCKLFLSIAGQMTT-RSSVYSTSIHHFEPYTEGFSVPAPSTYTAV 66

Query: 179 EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 238
           EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE
Sbjct: 67  EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 126

Query: 239 VDR 240
           VDR
Sbjct: 127 VDR 128

[Close]

BLAST of CaUC11G218360 vs. NCBI nr
Match: KAF8364950.1 (hypothetical protein HHK36_033029 [Tetracentron sinense] >KAF8376884.1 hypothetical protein HHK36_031389 [Tetracentron sinense])

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-52
Identity = 113/137 (82.48%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 105 NFCHPVHCGSSALXVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYT 164
           ++C P+        +  GERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YT
Sbjct: 449 DYCRPI--------LESGERWDRLYNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYT 508

Query: 165 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPAD 224
           EGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPAD
Sbjct: 509 EGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPAD 568

Query: 225 VVTIIGTQDIVSGEVDR 240
           VVTIIGTQDIVSGEVDR
Sbjct: 569 VVTIIGTQDIVSGEVDR 576

[Close]

BLAST of CaUC11G218360 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.8e-40
Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 153 TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLD 212
           +SIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAP  AHSQGLD
Sbjct: 308 SSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPCFAHSQGLD 367

Query: 213 SMSKHHMPADVVTIIGTQDIVSGEVDR 240
           SMSKHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 368 SMSKHHMPADVVTIIGTQDIVSGEVDR 394

[Close]

BLAST of CaUC11G218360 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-39
Identity = 85/110 (77.27%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 130 PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVS 189
           P+RC++ LS+             +SIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVS
Sbjct: 297 PSRCRMKLSM------------ESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVS 356

Query: 190 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 240
           NGSNRPYR KIRAPG AH QGLD MSKHHM ADVVTIIGTQDIV GEVDR
Sbjct: 357 NGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394

[Close]

BLAST of CaUC11G218360 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 68/85 (80.00%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 155 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSM 214
           IHHF+L+TEG++VP S TYT+VEAPKGEFGV+LVSNG+NRPYR KIRAPG  H QGLD M
Sbjct: 314 IHHFKLFTEGYTVPNSETYTSVEAPKGEFGVYLVSNGTNRPYRCKIRAPGFLHLQGLDMM 373

Query: 215 SKHHMPADVVTIIGTQDIVSGEVDR 240
           SK+HM ADVVTIIGTQDIV GEVDR
Sbjct: 374 SKNHMLADVVTIIGTQDIVFGEVDR 398

[Close]

BLAST of CaUC11G218360 vs. ExPASy Swiss-Prot
Match: Q37619 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 66/85 (77.65%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 155 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSM 214
           IHHF+ YT GF VPA  TYTAVEAPKGEFGV+LVSNG+++PYR KIRAPG AH QGLD M
Sbjct: 316 IHHFKFYTGGFVVPAGETYTAVEAPKGEFGVYLVSNGTSKPYRCKIRAPGFAHLQGLDFM 375

Query: 215 SKHHMPADVVTIIGTQDIVSGEVDR 240
           +++HM ADVVTIIGTQDIV GEVDR
Sbjct: 376 ARNHMLADVVTIIGTQDIVFGEVDR 400

[Close]

BLAST of CaUC11G218360 vs. ExPASy Swiss-Prot
Match: O21270 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.4e-31
Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 155 IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSM 214
           IHHF+LYTEG+SVP   TYTAVEAPKGEFGV+LVS+GS++PYR KI+APG +H QGL+ M
Sbjct: 312 IHHFKLYTEGYSVPIGETYTAVEAPKGEFGVYLVSDGSSKPYRCKIKAPGFSHLQGLNFM 371

Query: 215 SKHHMPADVVTIIGTQDIVSGEVDR 240
           SK HM ADVVTIIGTQDIV GEVDR
Sbjct: 372 SKGHMIADVVTIIGTQDIVFGEVDR 396

[Close]

BLAST of CaUC11G218360 vs. ExPASy TrEMBL
Match: A0A1S3X6J4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107761612 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53
Identity = 113/123 (91.87%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 119 VRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAV 178
           VRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYTAV
Sbjct: 80  VRFGERWDRLYNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPAPSTYTAV 139

Query: 179 EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 238
           EAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDIVSGE
Sbjct: 140 EAPKGEFGVFLVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 199

Query: 239 VDR 240
           VDR
Sbjct: 200 VDR 201

[Close]

BLAST of CaUC11G218360 vs. ExPASy TrEMBL
Match: A0A2G2Y7L1 (Complex1_49kDa domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_30168 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 111/123 (90.24%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 119 VRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAV 178
           VRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYT V
Sbjct: 6   VRFGERWDRLYNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPAPSTYTTV 65

Query: 179 EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 238
           EAPKGEFGVFLVSNGSNRPY RKIRAPG AHSQGLDSMSKHHMPADVVTIIGTQDIVSGE
Sbjct: 66  EAPKGEFGVFLVSNGSNRPYHRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 125

Query: 239 VDR 240
           VDR
Sbjct: 126 VDR 127

[Close]

BLAST of CaUC11G218360 vs. ExPASy TrEMBL
Match: A0A151UDY3 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Cajanus cajan OX=3821 GN=KK1_046510 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.8e-52
Identity = 112/123 (91.06%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 119 VRFGERWD--RQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAV 178
           VRFGER D      +RCKLFLSIAG+MTTG SSVYSTSIHHFELYTEGFSVPA STYTAV
Sbjct: 6   VRFGERSDLLLNRESRCKLFLSIAGKMTTG-SSVYSTSIHHFELYTEGFSVPAPSTYTAV 65

Query: 179 EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 238
           EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE
Sbjct: 66  EAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 125

Query: 239 VDR 240
           VDR
Sbjct: 126 VDR 127

[Close]

BLAST of CaUC11G218360 vs. ExPASy TrEMBL
Match: D7TKS7 (Complex1_49kDa domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s0246g00010 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 8.0e-52
Identity = 110/120 (91.67%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 122 GERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAP 181
           GERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGF VPA STYTAVEAP
Sbjct: 267 GERWDRLYNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAP 326

Query: 182 KGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 240
           KGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 327 KGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 385

[Close]

BLAST of CaUC11G218360 vs. ExPASy TrEMBL
Match: A0A1Y3BVB1 (Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_MTg0579581 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 131 ARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSN 190
           +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPASSTYTAVEAPKGEFGVFLVSN
Sbjct: 368 SRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPASSTYTAVEAPKGEFGVFLVSN 427

Query: 191 GSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 240
           GSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 428 GSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 475

[Close]

BLAST of CaUC11G218360 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 90/110 (81.82%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 130 PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVS 189
           P+RC++ LS+             +SIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVS
Sbjct: 297 PSRCRMKLSM------------ESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVS 356

Query: 190 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 240
           NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIV GEVDR
Sbjct: 357 NGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVFGEVDR 394

[Close]

BLAST of CaUC11G218360 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 165 FSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVV 224
           F +     Y  VEAPKGE G+FL+ + S  P+R KIR PG  + Q L  + K    AD++
Sbjct: 319 FELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPELVKRMKLADIM 378

Query: 225 TIIGTQDIVSGEVDR 240
           TI+G+ DI+ GEVDR
Sbjct: 379 TILGSIDIIMGEVDR 393

The following BLAST results are available for this feature:

BLAST of CaUC11G218360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG8362771.1	7.9e-54	92.68	hypothetical protein BUALT_BualtUnG0042100 [Buddleja alternifolia] >KAG8363164.1...	[more]
XP_016435338.1	3.0e-53	91.87	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana...	[more]
XP_022897754.1	3.9e-53	91.87	uncharacterized protein LOC111411454 [Olea europaea var. sylvestris]	[more]
QVJ97872.1	3.9e-53	91.87	hypothetical protein [Apium graveolens] >QVJ98117.1 hypothetical protein [Apium ...	[more]
KAF8364950.1	1.1e-52	82.48	hypothetical protein HHK36_033029 [Tetracentron sinense] >KAF8376884.1 hypotheti...	[more]

BLAST of CaUC11G218360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q36450	6.8e-40	94.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX...	[more]
P93306	2.6e-39	77.27	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX...	[more]
Q9TC96	1.4e-32	80.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea O...	[more]
Q37619	3.4e-31	77.65	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 ...	[more]
O21270	4.4e-31	77.65	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483...	[more]

BLAST of CaUC11G218360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3X6J4	1.5e-53	91.87	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like OS=Nicotiana tabacum ...	[more]
A0A2G2Y7L1	1.6e-52	90.24	Complex1_49kDa domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_3016...	[more]
A0A151UDY3	2.8e-52	91.06	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Cajanus cajan OX=3821 GN=KK1_04...	[more]
D7TKS7	8.0e-52	91.67	Complex1_49kDa domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s02...	[more]
A0A1Y3BVB1	1.5e-50	97.25	Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_M...	[more]

BLAST of CaUC11G218360 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00510.1	1.2e-44	81.82	NADH dehydrogenase subunit 7	[more]
ATCG01110.1	2.1e-12	46.67	NAD(P)H dehydrogenase subunit H	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 56..239 e-value: 5.1E-33 score: 116.3
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 151..239
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 151..239 e-value: 1.4E-29 score: 103.1
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 124..239
None	No IPR available	PANTHER	PTHR11993:SF10	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 2, MITOCHONDRIAL	coord: 124..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G218360.1	CaUC11G218360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H