CaUC11G217910 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G217910
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein CHROMATIN REMODELING 19
Location	Ciama_Chr11: 31463688 .. 31468673 (-)
RNA-Seq Expression	CaUC11G217910
Synteny	CaUC11G217910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAAGGAAAAACGCTTGTATGTGAACTCTTTTGCACGGTGAACGCGGAACAGCAGTCGTTCCTTTCGTCCTTTCTTCTCCATTTCTCACTGTCTTCCCCGCCGGAAAACTCACAAGTTCTCCCCTCACAGCATGAAGCGCGTCTTCGACGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCGCGTCTTCAGCAAACCACAGGCTGAACCTTCAATCCCTCCTCCGATTGAATCTTTTGCATACCGACCCCAGCAGCTCTACGTTTCCGATGACAGCAGTGACGAATGCGTCGTAGTCATGGAAAGTTCCAAGAATTTCGAGGAAAATTTAGAGGACGAGGATGTCGAGGTCGAGGGAGTGAAGTCCACCACGGCGGTCAGTCGTGGCCGTCGGTTTGTGATTGATGACGAAGATGAAGAAAGTGAGAGGGAATTGACCGAGGTTTGTGATGTAAAGTCGACGAGTGAGGAGGAGCAGGAGGAGGACAGGGAGGATGACGATGATGTCGTCGGGAAGGCTCTGCAGAAGTGTGCAAAATTATCTGCTGATTTGAAGAGAGAGCTGTACGGCTCTTCCGTCTCTACCTGCGAACGATATTCAGAAGTGGAGTCTTCTTCTGTTAGGATAGTTACCCAGGTATTTCTCAATTTATGTGTCATGAAGGTTTGTTTTTGTGAATTTGTATTACTGTGTATCCTGTCTTCTTAGCAAGGTAGGAAACGAGATAGATTGAACAACTTCCATGTGTTCAAGTGGTTATGAAATCTAGGTTAAGTTTTGTGAAACAATTAGGAAGGTGGACTTGGACTTCATCCTCCTCTTGATTCAATATCTGCAGTGGATTAAAACTTATTACTTGCAGATTTAGGACTCAATTTTTCTCGTACATTTGTTGGATTATGTGTTATGCGGACTTGGGATTTCATTCTCCTCTTGATACAATATCTGCGGCGGATTAAAAATTATTACTTGCAGATTTAGGACAATCATTTTCGTACATTTGTTGGATTATGTGTTATGCTTGTCGACATTTCTTCTTTGTGGTTTAGAACATGACATCTTTTTCAAAATATTATGAGTGAAATTTAAACTTTACACCGATTTTCTGCTGTCTTCTGTCATTAGATGATTAAGTGATTCGGTAATATTTTCTTCCTCTGGCCTGGCCTTCCTTGTCTGACACATAATAAGACAAACTACAAAGTGACAAAATAGATTGCCCAACACGAATAGCTTCGTCGAACTAATCATAAAGCATAACTTTGATTTCTGATAAGTGGATGTAATCAACATCTAACTTTTTTAAGTATCTGTTAAATGTGTATTTTGTTTGTCTTTTTTGTAAAAAGAACCTCACGAGGAGAAATGGAAGAAAAAGAAAAAGACGAGAAAAAAGCCCATACAATTGGACCAATGACTATGCAGGATAGAGCTTCAATTGTTGCCATTTTTTTTGTTTGGTAAGAGATAATTAGTTTTCAAAAAAAAGAAAATCTCCTTGGAGATGACAAGAAGTTTCCAATTTGCTTGAAGGGAAGCATAGCTAGAAAGGAAGTTGACAATGTACACCAGGATATAGCAAGGTAGAATAACCTGATTGTTCATCTTGAAAGTATGTTCCTTTTTAGAAGGATGAGGTTTTGTTGTAGTTCCACAGAATTATTTCACGATGGCGCTGCAGCGCCACTAATGGTGGTGCATCTCAATGGGTTGAACAACGTAGCGCTATGTGCGGTAAGATCTCCAATATTCCCGGTGGCATCGCGGCGCCATGCTGTTGCTTTGCCTTTTATTTGCATGTTGTACATTGACGTGCGGTGCAAGGCTTTGGTGGGGGTGGGGGTGGGGGGGGGGGCATTTTGGTCTTTTTGAGTCTCTTGTAGCCTCAGATGCTTGAATATGCTCCAAATAGCTCCAAATTAACCCTGAATTGCCCATAGCACTCCAAAATGCATGAAATGCTCGAGCTCCTATAAATGTAGACATTTAAGCTTATTAATCATACTAAACGAGCAAGATTAGGGGCACTAAGATAACACATTTCAGATGCTAGCATGTGGTGAATAAGATTTGAAAGAAGTTGGTGTCTTGGAAGAAGTCAGACTTATCTTGATCTACTCTGTTTTGAGTTGGATTCCAACCTACTTCCTATCCCTCTTTAGGATCTCGGTGTTAGTTTGTAAAACTTCAAAGAAGCTCATGTGGGATTTTCTTCAGGGTAGGGGTGGGGGAGAGGAAAAGATCGCACGTAGTAAACTGGGAGATTGTTTGTGATGAAACCTATTGACTTTAGGGAGAAGCTCATGTGGGATTTCCTTCGGGATAGGGGTGGGGGAGAGGAAAGGAGCACACTTAGTAATCTGGGAGATTGTTTGTGATGAAGCCTATTGACTTTAGGGGTTTAGGGATTGGTAATGTGCGAGAGATTGGCAAGGCCGTTTTGGCCAAATGGTTGTGGTGTTTCATTAGGAGTCCATTTTCTTGTGGCATAAGGTTATTGTGAGTAAATTTGCACTATCCTCTTTTGAGTGATCCTTTATCGCCCTTTCTTTTCCTAATTATAAGTGAAGTCCTTTGTGCTTTCTTTTCTCGTATCCATGAGAATGGAGTCTTTGAAGGTTTCATGGTGATGGTGGAAAAAGATAAAGGTCATGTCTCAATTTTGCAATTTGCGGATAATACACTTTTATTTTGCAAGTATGATGAAGCTATGTTGGAATCCTCATCCAAACTAGTGGGTTCTTTAGATGATGCTCCGAACAAAAGGTAAACTGGGACAAATCAACGTTATGTGGTGTTAATGTTGATGATAAAATTATAAAGCCAAAAAGCTATAGTTTACGTATTTGGGTTTACCTCTTGGTGAATATCCAAAACAACTATCTTTTTGGCAACCAATTATAGATAAAGTTCATAAAGAGCTAGACAGATGGGAGCGGTATAATCTATCTAGAGGAGGTCGATTAACTTTGTGTATTGCAGTCTTGGAAAATTTACTTACCTATTATATGTCAATGATCCTAATGCCCAGTTCGGATATTCTGGTGTGGATAATTATTTTTGGAACCTTGAATTGTTATGCTACTTTGCAACATAAGCTCCAGCCGCACTACCTTTCTCCTTTTATTTGTCCATTATGTGTGGCGAATATTGAAGATCTACAACATTTGTTTTCTGATTGCTAGTTCTCTCGTTCCTATTGGCGGCGTTTACTATCATATTTTAATCTCCATTGGGTCTTTCGAAGCTCGTTTTCAGAGAATATCACTCTGATCTTGGTTGGCCCTATATTATCCTCTAAATCTCAAATATTATGGTCCAATGTAGTCAAGGCTTTGGTATCTAAGATTTGGTTTAAATGTAATCAGAGGGTTTTTCATGACAAATCGCTAGATCAGTCAAATTGGTTGGGCTCAACATGTCTACTTGCTCCATCATGGTGTTCCCAATCTAAAACTTTTGCTAATTGTTTCATCCAGAACATTTGTTTGAATTTGAATGCTTGCATTTCTTTGATTTAGTTTATGACTTTGTATTATTTGCATTGAATAGGTAGATTCTGGTATCTTGTACTTTTGAGCATTAGACTCTTTTCATTATATCAATGAAAAGTATTGTTCCCGTTTAAACGTATGGTTACAGTGTGTATTGTGTTTTCTGTTCTTACAATTAATAACCTTGGTCATTATTAATTTCCTATTGTTTTTCTTTTCCATTGATTTATTATCCTAAATTTAAAATGAGGAATTTCAATGCACAATTTGTTGCTCCTTTAAGATAAAACTGCAATTTAACGAATTTTAATATCCTAATATAGGATGATATTAATGCGGCTTGTAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTGTATCAGAAGGGAGTTGGTGGAGGTACTGAATACCGTTCTTATCACCATTACGTGTAACACATAAATTTTTAGTAATTGCCATGGGCAACAACATCACGTTTACTTGTATATCTGATTTAATTTGACCATCCTTGTTAAAAGCTGTCATCGTCCAACTTTGGGATCTTTGTGAAAGTGCATTACTGTTCTGAGTCTGATTTATGTACAGCTTAAATGACTATCAAATTGTGCTGTTCTATTTCTTGTGGATTTTGATTTCAAGCCACTGGATTGAACTGTTCAATAAATGCATGGTAAAAAGTATTTTTAAGTCAACAAACTGGTTATTAATTGAACGATCTGATTTGGAGACTTTTGAATGGATTGCTGATTATAGAAACTGTTTTATGTAATCACTCGAGAGTCTCTGTAAAAGAGATTACCACCAAAGATACACATAATGGTTTCTTTTAGTCTTTGTGAAGGGCATCTAGTTGGATAGAATTGGAGCTCTTTTATAGTATGTTCTGATAAAAAGGAAGAAGTACCAGAAATATGCATTGCATAAACTTCTCTCCTCTCTCCCCTTTCCTATCCTTTCTCATTGCCACCATTGGTAGTTTTCTGGCCAACTAATTGGTTGTTCGGAGTGATGGCTCGTCATCTTCTTCCTCCCCCGACATCCATCACTGTAGATAGGAAAACCTTTTCCATTGAAGTATCTCATGGCATCAAGATCACCGAAGCTTCAAGGGACAAATCTTTACTCTCCCTCTTAAGAAGGAATCTCTTTGGTTGGAGCACCTTTAAATAAAAAATTCTTCAACAAGTCTAGATTGATGGAATATGACCTTTGGGTGGAAAAAATCTCTAACCGGAAAGGCCATTTTGCCAAGATTGTCAAGCTTGGTGTTAATGGAGGGTTCAATAAAATTATCTTACTGGTTGGCAACAACAAAGTTGGATGGAATGGCTTCCTCTCTCTTCTCAATGCACCAATCAACCAATCCATCAGCAAGCAAAATCCTAACCTTGTGTCATCAACTACCTCCTACAAAGATGCTCTCCATGTTCCA

mRNA sequence

AAGAAAAAGGAAAAACGCTTGTATGTGAACTCTTTTGCACGGTGAACGCGGAACAGCAGTCGTTCCTTTCGTCCTTTCTTCTCCATTTCTCACTGTCTTCCCCGCCGGAAAACTCACAAGTTCTCCCCTCACAGCATGAAGCGCGTCTTCGACGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCGCGTCTTCAGCAAACCACAGGCTGAACCTTCAATCCCTCCTCCGATTGAATCTTTTGCATACCGACCCCAGCAGCTCTACGTTTCCGATGACAGCAGTGACGAATGCGTCGTAGTCATGGAAAGTTCCAAGAATTTCGAGGAAAATTTAGAGGACGAGGATGTCGAGGTCGAGGGAGTGAAGTCCACCACGGCGGTCAGTCGTGGCCGTCGGTTTGTGATTGATGACGAAGATGAAGAAAGTGAGAGGGAATTGACCGAGGTTTGTGATGTAAAGTCGACGAGTGAGGAGGAGCAGGAGGAGGACAGGGAGGATGACGATGATGTCGTCGGGAAGGCTCTGCAGAAGTGTGCAAAATTATCTGCTGATTTGAAGAGAGAGCTGTACGGCTCTTCCGTCTCTACCTGCGAACGATATTCAGAAGTGGAGTCTTCTTCTGTTAGGATAGTTACCCAGGGAAGCATAGCTAGAAAGGAAGTTGACAATGTACACCAGGATATAGCAAGTTCCACAGAATTATTTCACGATGGCGCTGCAGCGCCACTAATGGTGGTGCATCTCAATGGGTTGAACAACGTAGCGCTATGTGCGGTAAGATCTCCAATATTCCCGGTGGCATCGCGGCGCCATGCTGTTGCTTTGCCTTTTATTTGCATGTTGTACATTGACGTGCGGTGCAAGGCTTTGGTGGGGGATGATATTAATGCGGCTTGTAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTGTATCAGAAGGGAGTTGGTGGAGGTACTGAATACCGTTCTTATCACCATTACGTATTGATGGAATATGACCTTTGGGTGGAAAAAATCTCTAACCGGAAAGGCCATTTTGCCAAGATTGTCAAGCTTGGTGTTAATGGAGGGTTCAATAAAATTATCTTACTGGTTGGCAACAACAAAGTTGGATGGAATGGCTTCCTCTCTCTTCTCAATGCACCAATCAACCAATCCATCAGCAAGCAAAATCCTAACCTTGTGTCATCAACTACCTCCTACAAAGATGCTCTCCATGTTCCA

Coding sequence (CDS)

ATGAAGCGCGTCTTCGACGAAATTTCCGACGAAGAGTGGTCCAATCACTCCTTCAAGCCCTCTCGCGTCTTCAGCAAACCACAGGCTGAACCTTCAATCCCTCCTCCGATTGAATCTTTTGCATACCGACCCCAGCAGCTCTACGTTTCCGATGACAGCAGTGACGAATGCGTCGTAGTCATGGAAAGTTCCAAGAATTTCGAGGAAAATTTAGAGGACGAGGATGTCGAGGTCGAGGGAGTGAAGTCCACCACGGCGGTCAGTCGTGGCCGTCGGTTTGTGATTGATGACGAAGATGAAGAAAGTGAGAGGGAATTGACCGAGGTTTGTGATGTAAAGTCGACGAGTGAGGAGGAGCAGGAGGAGGACAGGGAGGATGACGATGATGTCGTCGGGAAGGCTCTGCAGAAGTGTGCAAAATTATCTGCTGATTTGAAGAGAGAGCTGTACGGCTCTTCCGTCTCTACCTGCGAACGATATTCAGAAGTGGAGTCTTCTTCTGTTAGGATAGTTACCCAGGGAAGCATAGCTAGAAAGGAAGTTGACAATGTACACCAGGATATAGCAAGTTCCACAGAATTATTTCACGATGGCGCTGCAGCGCCACTAATGGTGGTGCATCTCAATGGGTTGAACAACGTAGCGCTATGTGCGGTAAGATCTCCAATATTCCCGGTGGCATCGCGGCGCCATGCTGTTGCTTTGCCTTTTATTTGCATGTTGTACATTGACGTGCGGTGCAAGGCTTTGGTGGGGGATGATATTAATGCGGCTTGTAAGGCTGAAGATTCTGATTTTGAGCCTGTTCTCAAGCCATATCAGCTGGTTGGCGTGAACTTTCTTCTTCTTTTGTATCAGAAGGGAGTTGGTGGAGGTACTGAATACCGTTCTTATCACCATTACGTATTGATGGAATATGACCTTTGGGTGGAAAAAATCTCTAACCGGAAAGGCCATTTTGCCAAGATTGTCAAGCTTGGTGTTAATGGAGGGTTCAATAAAATTATCTTACTGGTTGGCAACAACAAAGTTGGATGGAATGGCTTCCTCTCTCTTCTCAATGCACCAATCAACCAATCCATCAGCAAGCAAAATCCTAACCTTGTGTCATCAACTACCTCCTACAAAGATGCTCTCCATGTTCCA

Protein sequence

MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVVMESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQEEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKEVDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICMLYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGGGTEYRSYHHYVLMEYDLWVEKISNRKGHFAKIVKLGVNGGFNKIILLVGNNKVGWNGFLSLLNAPINQSISKQNPNLVSSTTSYKDALHVP

Homology

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BLAST of CaUC11G217910 vs. NCBI nr
Match: XP_038877194.1 (protein CHROMATIN REMODELING 19 isoform X1 [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 5.6e-94
Identity = 201/291 (69.07%), Postives = 207/291 (71.13%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVF+EISDEEWSNHSFKPSRVFSKPQ EPSIPPPIESFAYRPQQLY+SD+SSD+C VV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFSKPQTEPSIPPPIESFAYRPQQLYISDESSDDCCVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKNFEENLEDEDVEVEGVKSTT VSRGRRFVIDDEDE+SERELTEVCDVKSTSEEEQ
Sbjct: 61  MESSKNFEENLEDEDVEVEGVKSTTTVSRGRRFVIDDEDEDSERELTEVCDVKSTSEEEQ 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EEDREDDDDVVGKALQKCAKLS +LKRELYGSSVS CERYSEVESSSVRIVTQ       
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSDELKRELYGSSVSACERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CaUC11G217910 vs. NCBI nr
Match: XP_038877197.1 (protein CHROMATIN REMODELING 19 isoform X3 [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 5.6e-94
Identity = 201/291 (69.07%), Postives = 207/291 (71.13%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVF+EISDEEWSNHSFKPSRVFSKPQ EPSIPPPIESFAYRPQQLY+SD+SSD+C VV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFSKPQTEPSIPPPIESFAYRPQQLYISDESSDDCCVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKNFEENLEDEDVEVEGVKSTT VSRGRRFVIDDEDE+SERELTEVCDVKSTSEEEQ
Sbjct: 61  MESSKNFEENLEDEDVEVEGVKSTTTVSRGRRFVIDDEDEDSERELTEVCDVKSTSEEEQ 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EEDREDDDDVVGKALQKCAKLS +LKRELYGSSVS CERYSEVESSSVRIVTQ       
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSDELKRELYGSSVSACERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CaUC11G217910 vs. NCBI nr
Match: XP_038877196.1 (protein CHROMATIN REMODELING 19 isoform X2 [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 5.6e-94
Identity = 201/291 (69.07%), Postives = 207/291 (71.13%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVF+EISDEEWSNHSFKPSRVFSKPQ EPSIPPPIESFAYRPQQLY+SD+SSD+C VV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFSKPQTEPSIPPPIESFAYRPQQLYISDESSDDCCVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKNFEENLEDEDVEVEGVKSTT VSRGRRFVIDDEDE+SERELTEVCDVKSTSEEEQ
Sbjct: 61  MESSKNFEENLEDEDVEVEGVKSTTTVSRGRRFVIDDEDEDSERELTEVCDVKSTSEEEQ 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EEDREDDDDVVGKALQKCAKLS +LKRELYGSSVS CERYSEVESSSVRIVTQ       
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSDELKRELYGSSVSACERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CaUC11G217910 vs. NCBI nr
Match: XP_004140399.1 (protein CHROMATIN REMODELING 19 [Cucumis sativus] >XP_031741288.1 protein CHROMATIN REMODELING 19-like [Cucumis sativus] >KAE8648070.1 hypothetical protein Csa_018841 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 1.5e-91
Identity = 197/291 (67.70%), Postives = 206/291 (70.79%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVF+EISDEEWSNHSFKPSRVF+KPQ EPSIPPPIESFAYRP QLY+SD+SSD+CVVV
Sbjct: 1   MKRVFEEISDEEWSNHSFKPSRVFTKPQTEPSIPPPIESFAYRPHQLYISDESSDDCVVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKN+EENLEDEDVEVEGVKSTTAVSRGRRFV+DDED+ESERELTEVCDVKSTSEEE 
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDDESERELTEVCDVKSTSEEEL 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EE REDDDDVVGKALQKCAKLSA+LKRELYGSSVS  ERYSEVESSSVRIVTQ       
Sbjct: 121 EEGREDDDDVVGKALQKCAKLSAELKRELYGSSVSASERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CaUC11G217910 vs. NCBI nr
Match: XP_016902524.1 (PREDICTED: protein CHROMATIN REMODELING 19 isoform X3 [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 9.9e-91
Identity = 196/291 (67.35%), Postives = 205/291 (70.45%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVFDEISDEEWSNHSFKPSRVF+KPQ  PSIPPPIESFAYR  QLY+SD+SSD+CVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKN+EENLEDEDVEVEGVKSTTAVSRGRRFV+DDEDEESERELTEV DVKSTS++E 
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EEDREDDDDVVGKALQKCAKLSA+LKRELYGSSVSTCERYSEVESSSVRIVTQ       
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACK EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

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BLAST of CaUC11G217910 vs. ExPASy Swiss-Prot
Match: Q9ZUL5 (Protein CHROMATIN REMODELING 19 OS=Arabidopsis thaliana OX=3702 GN=ETL1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.8e-35
Identity = 119/313 (38.02%), Postives = 154/313 (49.20%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKP------QAEPSIPPPIESFAYR--PQQLYVSDD 60
           MKR FDEIS+EEWS HSF  SRV  +P      +A  +  P IESFA+R     + +  +
Sbjct: 1   MKRDFDEISEEEWSQHSFNASRVLKRPRTPKKTRAATNPTPSIESFAFRRPSTAMTIESN 60

Query: 61  SSD-ECVVVMESSK--------NFEENLEDEDVEVEGVKSTTAVSR-GRRFVIDDE---- 120
           SSD +CV + +           N E+ L +++ EVE  K     +R GRRFVI+DE    
Sbjct: 61  SSDGDCVEIEDLGDSDSDVKIVNGEDLLLEDEEEVEETKVVMRAARVGRRFVIEDEEASD 120

Query: 121 DEESERELTEVCDVKSTSEEEQEEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCE 180
           D++ E E +   D            R +D+DVVGKALQKCAK+SADL++ELYG+S    +
Sbjct: 121 DDDDEAESSASEDEFGGGGGGSGGRRGEDEDVVGKALQKCAKISADLRKELYGTSSGVTD 180

Query: 181 RYSEVESSSVRIVTQGSIARKEVDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCA 240
           RYSEVE+S+VRIVTQ                                             
Sbjct: 181 RYSEVETSTVRIVTQ--------------------------------------------- 234

Query: 241 VRSPIFPVASRRHAVALPFICMLYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGV 292
                                             +DI+ ACKAEDSDF+P+LKPYQLVGV
Sbjct: 241 ----------------------------------NDIDDACKAEDSDFQPILKPYQLVGV 234

[Close]

BLAST of CaUC11G217910 vs. ExPASy TrEMBL
Match: A0A1S3CC04 (protein CHROMATIN REMODELING 19 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499098 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 4.8e-91
Identity = 196/291 (67.35%), Postives = 205/291 (70.45%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVFDEISDEEWSNHSFKPSRVF+KPQ  PSIPPPIESFAYR  QLY+SD+SSD+CVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKN+EENLEDEDVEVEGVKSTTAVSRGRRFV+DDEDEESERELTEV DVKSTS++E 
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EEDREDDDDVVGKALQKCAKLSA+LKRELYGSSVSTCERYSEVESSSVRIVTQ       
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACK EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CaUC11G217910 vs. ExPASy TrEMBL
Match: A0A1S3CC36 (protein CHROMATIN REMODELING 19 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499098 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 4.8e-91
Identity = 196/291 (67.35%), Postives = 205/291 (70.45%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVFDEISDEEWSNHSFKPSRVF+KPQ  PSIPPPIESFAYR  QLY+SD+SSD+CVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKN+EENLEDEDVEVEGVKSTTAVSRGRRFV+DDEDEESERELTEV DVKSTS++E 
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EEDREDDDDVVGKALQKCAKLSA+LKRELYGSSVSTCERYSEVESSSVRIVTQ       
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACK EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CaUC11G217910 vs. ExPASy TrEMBL
Match: A0A1S4E2R3 (protein CHROMATIN REMODELING 19 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499098 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 4.8e-91
Identity = 196/291 (67.35%), Postives = 205/291 (70.45%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVFDEISDEEWSNHSFKPSRVF+KPQ  PSIPPPIESFAYR  QLY+SD+SSD+CVVV
Sbjct: 1   MKRVFDEISDEEWSNHSFKPSRVFTKPQTGPSIPPPIESFAYRSHQLYISDESSDDCVVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTSEEEQ 120
           MESSKN+EENLEDEDVEVEGVKSTTAVSRGRRFV+DDEDEESERELTEV DVKSTS++E 
Sbjct: 61  MESSKNYEENLEDEDVEVEGVKSTTAVSRGRRFVVDDEDEESERELTEVYDVKSTSDDEL 120

Query: 121 EEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIARKE 180
           EEDREDDDDVVGKALQKCAKLSA+LKRELYGSSVSTCERYSEVESSSVRIVTQ       
Sbjct: 121 EEDREDDDDVVGKALQKCAKLSAELKRELYGSSVSTCERYSEVESSSVRIVTQ------- 180

Query: 181 VDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPFICM 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 212

Query: 241 LYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                       DDINAACK EDSDFEPVLKPYQLVGVNFLLLLYQKGVGG
Sbjct: 241 ------------DDINAACKVEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 212

[Close]

BLAST of CaUC11G217910 vs. ExPASy TrEMBL
Match: A0A6J1FXC0 (protein CHROMATIN REMODELING 19 OS=Cucurbita moschata OX=3662 GN=LOC111447914 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 3.2e-87
Identity = 188/294 (63.95%), Postives = 205/294 (69.73%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVFDEISD+EWSNHSFKPSRVFSKPQ +P IPPPIESFAYRP  LY+SDDS D+CVVV
Sbjct: 1   MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYRPPSLYISDDSGDDCVVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTS---E 120
           MESSKNF+E+LED+DVEVEGVKS+TA+SRGRRFV+DDEDEESE+ELTEVCDV+STS   E
Sbjct: 61  MESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEE 120

Query: 121 EEQEEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSIA 180
           EE+EEDRED+DDVVG AL+KCAKLSA+LKRELYGSSVS CERYSEVESSSVRIVTQ    
Sbjct: 121 EEEEEDREDEDDVVGMALRKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ---- 180

Query: 181 RKEVDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALPF 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 215

Query: 241 ICMLYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                          DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLY+KGVGG
Sbjct: 241 ---------------DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG 215

[Close]

BLAST of CaUC11G217910 vs. ExPASy TrEMBL
Match: A0A6J1JU99 (protein CHROMATIN REMODELING 19 OS=Cucurbita maxima OX=3661 GN=LOC111487952 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 187/295 (63.39%), Postives = 204/295 (69.15%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKPQAEPSIPPPIESFAYRPQQLYVSDDSSDECVVV 60
           MKRVFDEISD+EWSNHSFKPSRVFSKPQ +P IPPPIESFAYRP  LY+SDDS D+CVVV
Sbjct: 1   MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYRPPSLYISDDSGDDCVVV 60

Query: 61  MESSKNFEENLEDEDVEVEGVKSTTAVSRGRRFVIDDEDEESERELTEVCDVKSTS---- 120
           MESSKNF+E+LED+DVEVEGVKS+T +SRGRRFV+DDEDEESE+ELTEVCDV+STS    
Sbjct: 61  MESSKNFKESLEDDDVEVEGVKSSTVMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEE 120

Query: 121 EEEQEEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCERYSEVESSSVRIVTQGSI 180
           EEE+EEDRED+DDVVG AL+KCAKLSA+LKRELYGSSVS CERYSEVESSSVRIVTQ   
Sbjct: 121 EEEEEEDREDEDDVVGMALRKCAKLSAELKRELYGSSVSACERYSEVESSSVRIVTQ--- 180

Query: 181 ARKEVDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCAVRSPIFPVASRRHAVALP 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 216

Query: 241 FICMLYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYQKGVGG 292
                           DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLY+KGVGG
Sbjct: 241 ----------------DDINAACKAEDSDFEPVLKPYQLVGVNFLLLLYRKGVGG 216

[Close]

BLAST of CaUC11G217910 vs. TAIR 10
Match: AT2G02090.1 (SNF2 domain-containing protein / helicase domain-containing protein )

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-36
Identity = 119/313 (38.02%), Postives = 154/313 (49.20%), Query Frame = 0


Query: 1   MKRVFDEISDEEWSNHSFKPSRVFSKP------QAEPSIPPPIESFAYR--PQQLYVSDD 60
           MKR FDEIS+EEWS HSF  SRV  +P      +A  +  P IESFA+R     + +  +
Sbjct: 1   MKRDFDEISEEEWSQHSFNASRVLKRPRTPKKTRAATNPTPSIESFAFRRPSTAMTIESN 60

Query: 61  SSD-ECVVVMESSK--------NFEENLEDEDVEVEGVKSTTAVSR-GRRFVIDDE---- 120
           SSD +CV + +           N E+ L +++ EVE  K     +R GRRFVI+DE    
Sbjct: 61  SSDGDCVEIEDLGDSDSDVKIVNGEDLLLEDEEEVEETKVVMRAARVGRRFVIEDEEASD 120

Query: 121 DEESERELTEVCDVKSTSEEEQEEDREDDDDVVGKALQKCAKLSADLKRELYGSSVSTCE 180
           D++ E E +   D            R +D+DVVGKALQKCAK+SADL++ELYG+S    +
Sbjct: 121 DDDDEAESSASEDEFGGGGGGSGGRRGEDEDVVGKALQKCAKISADLRKELYGTSSGVTD 180

Query: 181 RYSEVESSSVRIVTQGSIARKEVDNVHQDIASSTELFHDGAAAPLMVVHLNGLNNVALCA 240
           RYSEVE+S+VRIVTQ                                             
Sbjct: 181 RYSEVETSTVRIVTQ--------------------------------------------- 234

Query: 241 VRSPIFPVASRRHAVALPFICMLYIDVRCKALVGDDINAACKAEDSDFEPVLKPYQLVGV 292
                                             +DI+ ACKAEDSDF+P+LKPYQLVGV
Sbjct: 241 ----------------------------------NDIDDACKAEDSDFQPILKPYQLVGV 234

The following BLAST results are available for this feature:

BLAST of CaUC11G217910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877194.1	5.6e-94	69.07	protein CHROMATIN REMODELING 19 isoform X1 [Benincasa hispida]	[more]
XP_038877197.1	5.6e-94	69.07	protein CHROMATIN REMODELING 19 isoform X3 [Benincasa hispida]	[more]
XP_038877196.1	5.6e-94	69.07	protein CHROMATIN REMODELING 19 isoform X2 [Benincasa hispida]	[more]
XP_004140399.1	1.5e-91	67.70	protein CHROMATIN REMODELING 19 [Cucumis sativus] >XP_031741288.1 protein CHROMA...	[more]
XP_016902524.1	9.9e-91	67.35	PREDICTED: protein CHROMATIN REMODELING 19 isoform X3 [Cucumis melo]	[more]

BLAST of CaUC11G217910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUL5	2.8e-35	38.02	Protein CHROMATIN REMODELING 19 OS=Arabidopsis thaliana OX=3702 GN=ETL1 PE=1 SV=...	[more]

BLAST of CaUC11G217910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CC04	4.8e-91	67.35	protein CHROMATIN REMODELING 19 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A1S3CC36	4.8e-91	67.35	protein CHROMATIN REMODELING 19 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A1S4E2R3	4.8e-91	67.35	protein CHROMATIN REMODELING 19 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A6J1FXC0	3.2e-87	63.95	protein CHROMATIN REMODELING 19 OS=Cucurbita moschata OX=3662 GN=LOC111447914 PE...	[more]
A0A6J1JU99	1.2e-86	63.39	protein CHROMATIN REMODELING 19 OS=Cucurbita maxima OX=3661 GN=LOC111487952 PE=4...	[more]

BLAST of CaUC11G217910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02090.1	2.0e-36	38.02	SNF2 domain-containing protein / helicase domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G217910.1	CaUC11G217910.1	mRNA