CaUC11G217600 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAAACGAATTGTGTCTCACCACTATGTCTCATTGTCTGTGCTTCTCTATTTCCTTTATGAAGTACTACACCACTCAACTAATTCACTCTCAAACCTCCACAAACGTGCTCTTCAACTCTCAATTTCATCTCCTTCTCAAGCTCCCATAAATCCTTTCTTATGCTAACGCATGGTAAGAACCTACTTTTCACTCTTTTATCCATTTTTGCTTCATGGGTTTTCAGTTTCTTGCGAAGTTTTCATCTGGGTACCTTTTTTCGTTAGGATTTTCTGCCTTTTTGTACTCGAATTTGTGATTTCTGGGGCTTTCATCTGCTGAATTAGGTCCCCTCTTTTCCTTTCTGCTGCTGTTCTCAAAAGGGTCTTCCAATTTTGCTATTAATTCTCTTTAGAAATGGATAATTGTGAATATTATCTCTGTTTAGAAATTTGGAGTTAGCTATTAAGTGAAAGAACACTGGTGCAGAACTCGTTTGCTTCTTCTCCTTTTTACATTTTATTTTTTCGTTGTTTTCTTGGGTACATGTTGACTTGAATTATCTATAAGTGGTTTTATATTTTTCTTTTGGTGAGTTTAGCTTGTAGTAGTATGCTTATTAGTTGATTATCCTAATTTTCTGTTTTAGGGATAAGCACAACAATTTTAGGTTGAATTTTGAGAATTTTGAATACCTACTTATGTCTATTTCAGTAGGATTTCCCTTTGCTCTTTGGAATTATTGGAAGTTAAGTTAGTTAATGCTATATTAAGTAAATGGCTAAGGAGAACATAAAGAGGAGAGAGGTGTTTATGTTTATGTTAACTCATGCGGTATTAGGTTTTTTAGGCTAATTAATTCAACAAAGAAGATTATTGATGTAATGAGTTTCTTTATCCTTTTCTTATGTGTAAAAACAAATGTCTTATTTCATTGTACTTGAAGAGAGTAAATACACACTGTTTGGGATAATTCAAAAGACCTCTGACTCTCAAGCATACTTAGTTGCAAGAAGTTGCATAAGATCTCTTGTTGTTTTCTTCATCAACTGCAACTGGAACTGCAACTTTACTTGTTTTTGCTGGTTTGTGCCTTTTACTTTGTGGTTTCAAATTCAACGGTTCAATCCTAGGAATATCAGAGCATATTATATCTTGTAGCCATTCCTTTAAGTAAAAAAAATGGTATTGTCCCTTAGTTGAATGCCAGCAAGGCTATGTTTAGTCAAGAAATGGATGAAATGTTAAGGCTTTGAGTCAATACATTTTAATTTAGTGTGTTTCCTAATTCCCTTCTGGAGTTCTCTTTATAGGGATTTTGCTAATTATCCCCCCTCTTTGATATTTATGAACTGATTTGGATGTTCATAATTGGATGTCCATAATCTCTTTCTTATGGGTTCTTAGACTTCTTCCCTTTTAGTTTTTGGTTACATTACTTTATTGGGAAGTTTGTTTCCTAGCATGACACTAATGAAAGTGGTGGGTTTGAATCGATACAATTATTAGTTTAGGTGTTAAGTCATCCAGCCTCCAAATATATAAATTTATAATTTTTTTTCTAGAAAACTAAAAAAAATGGAAGTATTCAACCACTCGCATAATTTCCCTGTCTCCAAATGTTACTTCAATTTCTTCTCTCTGTTTCTGCTTGTTCTTTGAAAGTCAGACAGGAAGGTTGAAATGTAAGACCCGTGATCATCACATGGTTTAGTTATTTAATAATAAAAACAGATAGGGAAATACTTCTTCAGGCAAATTGCAAAAACCACCCCTAAAGAATAGTGGTAGTTGCAATTATACCCTTAAACTTTCAATTTTAAAAATTGAGCCCTCAAACTTAAATGAGTGTTAAAATTAGGTCAAATTGGATCTTCAAACTTACATAATTGTATAAATTGTAACATTTGCATAAGTTTGAGGGTTCAATTTTTATCACTTGTGGGTCTAATTTCTACAATTATTGTGAGCTTGATGGTCCAATTTTAATACTTTTGGAAGTTTAGGGGCCCAATTTTTACAATTGAAAGTTTGAGAGTGTAATTGCAACTACCACCATACTTTAGGGGTGGGTTTTGCAATTCGCCCTACTTCTTCTTTATCCTCTAATTGCCTTTGACTTTGAATGACATATGTTTAGAAGGTTAAACTACAAATTTGGTCACAAAATTTAGGGTAGCATCTTTAATCTTTGTACTTTAAATACCTTGTTATTGATTTCTCAACTTTCAAAGGTTGTGTCTATTTGGTCCCTCTCAAAAAAGGTTTTTAATAGATCCTTAAACTTTAAATTTGGTGTATAATAGATTCCTACCAATAACTCCATAAGTTTAATGCTTCTATGAAATATTTGACTATATTACTTAATGATAATGCAACAACCACTTAGGCAGTTTCAAGTAGTTAAACTAATTGAGTTATTGACGCTAACTTATTAGACACAAGATTGTGAGTTCAAGGGCATATTAAAATCATTTCAATGTATAAAAACTAAATAGACAATACCAGATATTTACAGACCTATAAGCATTCCATGAAATATATGGATTTTAACAAATACAACTCTAAAAGTTCAGGGATCGAACTTATAATTTAACCTATTTCGAGTGTCTAGGTTTCTCGGATATTAGATGGCTTCTCTTGTGTGTATCTTTTTTTTGTATCTTTGGTGAACCCCTCTTCCTCCACAGAAGAATTAACATGTTGGATCGTGTTTCGAGGATGTCGTGTAGTTTGATGTCTCTAAAGTGTTACCTCTTTTGCACAGGCACAAGTAAGGACTTTGACCACTTTTTTGGATTTTGTATTATTTCCATTCTGCTGTGGTATAGTTTCTCTAAAGAGTACAGCTTCCAAGATGGTAGATTGAGAGATGCGGTTTGATGGTTGAGGAGCTCCTTTTTCACCCACCTATTCTTGATAATGGTCGATTTTGGTGGATCTGGGGTTGTGCGGTGTTATGAAGTATTTGGTTTGAGAGGAACAATAAAATGTTTAGAGAGTTGGGGAAAACCAAGAAGGTTGGGTGGGCCCTTAGAAAGTTGACTTTTAGGTTGATAGTATAAGCACAGTTGAGCTATGCTCATTTTGGTAAACACCTAGCATTAGTTAGTATGTCATAATTAAGCTTCTCTGCTTATTATCACTAAAATAGTTTTTTGTATATCATAAATCTTGCATGATTAAAGGTTATGCTGTTGAATTCCTTGTGGAAATTTTCTGGCAATAATGTTAAAAAATTTCTATTGAGATGATTGTCTAGTTAGTTTTATGTTCTCTTTGATACGGAAATATGGCTATTCATAGATATAATAAAAGAGTCTAATGTTCTAGTTTTATGTTAGCAGACCTTTATTTCTCGACATAAATTCACTGACCTTGTACTCCCTTAGTAGGATGGGAGTGTTTATCTCTATTTTGTGCACATATATAGTTCTGCAGGGACAGGCGTGGCTCGCCCTTTTAAGTTCCAACATCCTAAGAACATCATCAGTTATTATTTCTTGTTGTAGAGTGGTACCGAACGGTAGTCGCATAACATACTGCTCTGGTTTGTTGTAGGCTGATGGAGACTTGTAGCAGCATAAATCCTGTAAATGTCAATTATCAAAGGTTGCATTAGATTAAGTTTTCATTGATGTAGGTTAAAAGCAACATTGGTGACAGCCAACATTGGTTTTTTTGACTGTGTTCGACCATATAATTCTAAATCCTATTTCCAATATGCAATCACCAAAGTTCAATTTGGAATGTGAAAAAGATTCAGAAATTAGTAGCAAAGCTTCTTATGACATGGCTGTACTTGAAGCAACCCCTGATCCCTCCAAGGACAGTGGTACTACCTCCTGCCTCACGAACTCGATCAAAGCTAATCCCGATCAAGGTTCGGTTTCCCTTGACTTGACACTTCATTTTAACTCAAATGATATCGACACAAAAAGAAGTGGTGAGACTAGTAGTGATGTAGTTGGCCATGTTTCTGGCCCGATGAACCTGAGGATATTTTCTTGCAATTACTGTCGGCGTAAATTCTTCAGCTCACAGGCCCTGGGTGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGAATGGGTATGTTCCCGAACAGATATACCAGCTTGGCCTCACTGCCACTTCACGGTTCTGCATATCGGTCGCTTGGGATCGAAGCTCATGCTGCAGTGCACCCTAAAATCTTACCTGCAGAGCGGCCATTTATTGCTAGAACTGGAGCCATGATCGATGAAGGCTACATTGGAATGCCATATTTTGTGGAAGAGGATGATGTTGGTCCATTTTGGCCGGGGAGTTTTCGACGAGCAAATGGTGAATTCATTGATTCTACGCCACGGGAAGCATCTAAAGTTTCAAGTCCAAACTCCAATACGAGCATGCCACCATCGAAAACGAGTACTTCTTCACCTGATCTTACTTTGAGACTTTAA TTGAAAACGAATTGTGTCTCACCACTATGTCTCATTGTCTGTGCTTCTCTATTTCCTTTATGAAGTACTACACCACTCAACTAATTCACTCTCAAACCTCCACAAACGTGCTCTTCAACTCTCAATTTCATCTCCTTCTCAAGCTCCCATAAATCCTTTCTTATGCTAACGCATGGCTGATGGAGACTTGTAGCAGCATAAATCCTGTAAATGTCAATTATCAAAGGTTGCATTAGATTAAGTTTTCATTGATGTAGGTTAAAAGCAACATTGGTGACAGCCAACATTGGTTTTTTTGACTGTGTTCGACCATATAATTCTAAATCCTATTTCCAATATGCAATCACCAAAGTTCAATTTGGAATGTGAAAAAGATTCAGAAATTAGTAGCAAAGCTTCTTATGACATGGCTGTACTTGAAGCAACCCCTGATCCCTCCAAGGACAGTGGTACTACCTCCTGCCTCACGAACTCGATCAAAGCTAATCCCGATCAAGGTTCGGTTTCCCTTGACTTGACACTTCATTTTAACTCAAATGATATCGACACAAAAAGAAGTGGTGAGACTAGTAGTGATGTAGTTGGCCATGTTTCTGGCCCGATGAACCTGAGGATATTTTCTTGCAATTACTGTCGGCGTAAATTCTTCAGCTCACAGGCCCTGGGTGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGAATGGGTATGTTCCCGAACAGATATACCAGCTTGGCCTCACTGCCACTTCACGGTTCTGCATATCGGTCGCTTGGGATCGAAGCTCATGCTGCAGTGCACCCTAAAATCTTACCTGCAGAGCGGCCATTTATTGCTAGAACTGGAGCCATGATCGATGAAGGCTACATTGGAATGCCATATTTTGTGGAAGAGGATGATGTTGGTCCATTTTGGCCGGGGAGTTTTCGACGAGCAAATGGTGAATTCATTGATTCTACGCCACGGGAAGCATCTAAAGTTTCAAGTCCAAACTCCAATACGAGCATGCCACCATCGAAAACGAGTACTTCTTCACCTGATCTTACTTTGAGACTTTAA ATGCAATCACCAAAGTTCAATTTGGAATGTGAAAAAGATTCAGAAATTAGTAGCAAAGCTTCTTATGACATGGCTGTACTTGAAGCAACCCCTGATCCCTCCAAGGACAGTGGTACTACCTCCTGCCTCACGAACTCGATCAAAGCTAATCCCGATCAAGGTTCGGTTTCCCTTGACTTGACACTTCATTTTAACTCAAATGATATCGACACAAAAAGAAGTGGTGAGACTAGTAGTGATGTAGTTGGCCATGTTTCTGGCCCGATGAACCTGAGGATATTTTCTTGCAATTACTGTCGGCGTAAATTCTTCAGCTCACAGGCCCTGGGTGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGAATGGGTATGTTCCCGAACAGATATACCAGCTTGGCCTCACTGCCACTTCACGGTTCTGCATATCGGTCGCTTGGGATCGAAGCTCATGCTGCAGTGCACCCTAAAATCTTACCTGCAGAGCGGCCATTTATTGCTAGAACTGGAGCCATGATCGATGAAGGCTACATTGGAATGCCATATTTTGTGGAAGAGGATGATGTTGGTCCATTTTGGCCGGGGAGTTTTCGACGAGCAAATGGTGAATTCATTGATTCTACGCCACGGGAAGCATCTAAAGTTTCAAGTCCAAACTCCAATACGAGCATGCCACCATCGAAAACGAGTACTTCTTCACCTGATCTTACTTTGAGACTTTAA MQSPKFNLECEKDSEISSKASYDMAVLEATPDPSKDSGTTSCLTNSIKANPDQGSVSLDLTLHFNSNDIDTKRSGETSSDVVGHVSGPMNLRIFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFPNRYTSLASLPLHGSAYRSLGIEAHAAVHPKILPAERPFIARTGAMIDEGYIGMPYFVEEDDVGPFWPGSFRRANGEFIDSTPREASKVSSPNSNTSMPPSKTSTSSPDLTLRL Homology
BLAST of CaUC11G217600 vs. NCBI nr
Match: XP_038892125.1 (zinc finger protein 7-like isoform X1 [Benincasa hispida] >XP_038892126.1 zinc finger protein 7-like isoform X1 [Benincasa hispida] >XP_038892127.1 zinc finger protein 7-like isoform X1 [Benincasa hispida]) HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114 Identity = 219/246 (89.02%), Postives = 229/246 (93.09%), Query Frame = 0
BLAST of CaUC11G217600 vs. NCBI nr
Match: XP_004140418.1 (zinc finger protein 4 [Cucumis sativus] >XP_031745933.1 zinc finger protein 4-like [Cucumis sativus] >XP_031745934.1 zinc finger protein 4-like [Cucumis sativus] >XP_031745935.1 zinc finger protein 4-like [Cucumis sativus] >XP_031745936.1 zinc finger protein 4 [Cucumis sativus] >XP_031745937.1 zinc finger protein 4 [Cucumis sativus] >KAE8637318.1 hypothetical protein CSA_019104 [Cucumis sativus] >KAE8637324.1 hypothetical protein CSA_021684 [Cucumis sativus]) HSP 1 Score: 394.0 bits (1011), Expect = 9.2e-106 Identity = 206/246 (83.74%), Postives = 214/246 (86.99%), Query Frame = 0
BLAST of CaUC11G217600 vs. NCBI nr
Match: XP_008456867.1 (PREDICTED: zinc finger protein 4-like isoform X2 [Cucumis melo] >KAA0032151.1 zinc finger protein 4-like isoform X2 [Cucumis melo var. makuwa] >TYK14396.1 zinc finger protein 4-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 386.0 bits (990), Expect = 2.5e-103 Identity = 201/246 (81.71%), Postives = 212/246 (86.18%), Query Frame = 0
BLAST of CaUC11G217600 vs. NCBI nr
Match: XP_008456866.1 (PREDICTED: zinc finger protein 4-like isoform X1 [Cucumis melo]) HSP 1 Score: 386.0 bits (990), Expect = 2.5e-103 Identity = 201/246 (81.71%), Postives = 212/246 (86.18%), Query Frame = 0
BLAST of CaUC11G217600 vs. NCBI nr
Match: XP_022988186.1 (zinc finger protein 7-like [Cucurbita maxima] >XP_022988195.1 zinc finger protein 7-like [Cucurbita maxima] >XP_022988202.1 zinc finger protein 7-like [Cucurbita maxima] >XP_022988210.1 zinc finger protein 7-like [Cucurbita maxima] >XP_022988218.1 zinc finger protein 7-like [Cucurbita maxima] >XP_022988227.1 zinc finger protein 7-like [Cucurbita maxima] >XP_022988233.1 zinc finger protein 7-like [Cucurbita maxima] >XP_022988238.1 zinc finger protein 7-like [Cucurbita maxima]) HSP 1 Score: 365.9 bits (938), Expect = 2.7e-97 Identity = 188/246 (76.42%), Postives = 206/246 (83.74%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29 Identity = 92/257 (35.80%), Postives = 136/257 (52.92%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24 Identity = 96/226 (42.48%), Postives = 118/226 (52.21%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.8e-18 Identity = 59/136 (43.38%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.2e-16 Identity = 50/129 (38.76%), Postives = 78/129 (60.47%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.1e-11 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy TrEMBL
Match: A0A0A0KMD6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G255670 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 4.4e-106 Identity = 206/246 (83.74%), Postives = 214/246 (86.99%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy TrEMBL
Match: A0A5A7SRH8 (Zinc finger protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00410 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103 Identity = 201/246 (81.71%), Postives = 212/246 (86.18%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy TrEMBL
Match: A0A1S3C4V8 (zinc finger protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496682 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103 Identity = 201/246 (81.71%), Postives = 212/246 (86.18%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy TrEMBL
Match: A0A1S3C466 (zinc finger protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496682 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103 Identity = 201/246 (81.71%), Postives = 212/246 (86.18%), Query Frame = 0
BLAST of CaUC11G217600 vs. ExPASy TrEMBL
Match: A0A6J1JCH7 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111485499 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.3e-97 Identity = 188/246 (76.42%), Postives = 206/246 (83.74%), Query Frame = 0
BLAST of CaUC11G217600 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 ) HSP 1 Score: 131.7 bits (330), Expect = 7.9e-31 Identity = 92/257 (35.80%), Postives = 136/257 (52.92%), Query Frame = 0
BLAST of CaUC11G217600 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 ) HSP 1 Score: 115.2 bits (287), Expect = 7.7e-26 Identity = 96/226 (42.48%), Postives = 118/226 (52.21%), Query Frame = 0
BLAST of CaUC11G217600 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 ) HSP 1 Score: 92.0 bits (227), Expect = 7.0e-19 Identity = 59/136 (43.38%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of CaUC11G217600 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 ) HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17 Identity = 50/129 (38.76%), Postives = 78/129 (60.47%), Query Frame = 0
BLAST of CaUC11G217600 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 81.6 bits (200), Expect = 9.4e-16 Identity = 60/163 (36.81%), Postives = 81/163 (49.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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