CaUC11G217210 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC11G217210
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr11: 30660362 .. 30662448 (-)
RNA-Seq ExpressionCaUC11G217210
SyntenyCaUC11G217210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTGATTTGAATGTGAGGAAGAAGAGGAAGTGGGCGAGTGTTTTTGATATGAAGGCCGGAAATGGGAAGGGAAGGCATTTGAATTGGCAGGCCTTTTTGGAAAAGCGAAAGCCCAGAGCGAGCAGTGGCTGCCTTCCCTTACTTGGCTTTGGCAATTTATCAAACAGGTGAACTGCAACAACTCTATTCTACTTCTACTTCTACTTCTATTCTATGTTTCATCAAAAACTCAAAATTCTCTCACTCTTCAATCATTGAAAAGCTTTACCAGCTCACGTTAGCAGACACCACAAGCCGAACAGTGCCTCGAGCTTTTCAATATATATATATATATAAATGGAAAACCCTGCCACTTCGCTCTGCTCTCTGTGTCCTCTGCGGCTGTGTCTGGTGAACGGTGATAATGGCAGAGCTGGGTGTGAACCCCACCTACATCGTCACGAGTCCACTCACCACTCACCACCAAAAATTTAGGAAAAAAAAAGAGAGAGTAAGAAATTCCTGTTCCGACAGTACTATACTTCGGAAATCGCTTCGGTAGATCAACGAGGATGACTGTTGGTTTGAGATGAATTTTTGTATATTATGTTATTTTGAGCTCATGAATGAAACCCCATTTGAGAGAAGATGTTGAGATTCAGACCCATCTCTCTGGGATTTGGCATTTCTTAATTCCTTAGCAACAAATGAGTTCTTGGACATCCATTATAACGTAGGACAAGGAGGATAAAAGGACACAGATTTCTCCATTTTCAAGATCATTTTTCTGAACGAGGCAATCCCAGGCCCACAGAGTTATACTTATGGCCATTACCCCATAAGTGGACTCGAGGTTGGGACCATTTAAATTCAACCCTCATCCTAAATCAAAACCAAATCTCTTCCTTCAGTTTAAGTAAGAATTCAACGGCTTGCTTAAGTGTACAGTTGCTGCTAAGTTTCAGTGCTTATTTTTAAGAAATCAGGAAGGTTTTAATGATTAATGAAGAATAGTTGCTGTGTCAGTGTGCATATCCAATGATTTTGCCCTGCCTATCTTTCTTTCTTTCATTTTTTTTAATGCTTGCATTTTCCACAAGAAAGCTGGACGAAGTCTGAAAGAATATTGAGTAACAATGTTGGAAAAGGCTTTATTTCTGCTGATTAGCTGATTTCCTGGGCACAGACTCAGAAAGAGTGGGGTGTTTCGTTGAGAACTTTGTAAATGAATGTGTTTGAACTGAACTTTGATTGTAGGCTGCTGTGTTGAAGTGTATGTGTATGTATATGTATTATATGTATATGTATAATATGTATATGTATATGTTTTTGTGTTTGTATCTCTTTCCTACGTAGTGCTCACGTGGGGTCTGAGATGGTTGCTTCCATCGTGCTTTTCGCTTCTTTCTTTGCTCTGCAATGCAGTGGGTGGAGTGGTGAGTCACCAGGGCAGGGGCAAAGGGCAGAGACCCAGAGAAGGCAAAGACAAAAATCACTGAAAGATCCACACACACATCCACATGGGTTTCTTACTCCTCCAAAAATTCTCTCTTTCTCGCCCTCAACTCAACTCAACTCTATCAATCTACTCAAACTCTTCTTCGCAGATGCCTTAAATTTTGCTAAATGGGTTCGTACAACAAAACAGACACTCCCATATGGCCATTTCAGAGCAGCCTTTTTCACCTTCTCTCTTTACCTTTACCATTACCATTACAGTCTCCTCTTCCCTTTTCCCTTTCCTTCTTCCTCTCTCTCTGTTTTCCTCAAAGCCTACAACTGACTACTCTTCGCTCCTTTCTTTCAATCTCATTCCCAAATGAAGCTTGCTTACTTGCTGCATTTATTGTGGGGTGCAGAAACCTTTTCTTTCTTTTGCCTGAGTTGTAATCTGTCATTGTCAGGGCGTCTTATTTACCGCCCCTTCCTCACCATCTTTTCTTAATTTGCTTACCCTTCGTACACTCCATCATTTTCCGCTTACTGCAAACTTCTGGGCTTTCATAACTGTACTTACTACCAGAAGTGACAACACACTATTCTCTTTCCCTTATGTTTACTTGATTTGTGCTCTGCCACTGCTTGCTTTGCCATTTCTGTAA

mRNA sequence

ATGGGTTTTGATTTGAATGTGAGGAAGAAGAGGAAGTGGGCGAGTGTTTTTGATATGAAGGCCGGAAATGGGAAGGGAAGGCATTTGAATTGGCAGGCCTTTTTGGAAAAGCGAAAGCCCAGAGCGAGCAGTGGCTGCCTTCCCTTACTTGGCTTTGGCAATTTATCAAACAGTGCTCACGTGGGGTCTGAGATGGTTGCTTCCATCGTGCTTTTCGCTTCTTTCTTTGCTCTGCAATGCAGTGGGTGGAGTGGTGAGTCACCAGGGCAGGGGCAAAGGGCAGAGACCCAGAGAAGGCAAAGACAAAAATCACTGAAAGATCCACACACACATCCACATGGGTTTCTTACTCCTCCAAAAATTCTCTCTTTCTCGCCCTCAACTCAACTCAACTCTATCAATCTACTCAAACTCTTCTTCGCAGATGCCTTAAATTTTGCTAAATGGGGCGTCTTATTTACCGCCCCTTCCTCACCATCTTTTCTTAATTTGCTTACCCTTCGTACACTCCATCATTTTCCGCTTACTGCAAACTTCTGGGCTTTCATAACTGTACTTACTACCAGAAGTGACAACACACTATTCTCTTTCCCTTATGTTTACTTGATTTGTGCTCTGCCACTGCTTGCTTTGCCATTTCTGTAA

Coding sequence (CDS)

ATGGGTTTTGATTTGAATGTGAGGAAGAAGAGGAAGTGGGCGAGTGTTTTTGATATGAAGGCCGGAAATGGGAAGGGAAGGCATTTGAATTGGCAGGCCTTTTTGGAAAAGCGAAAGCCCAGAGCGAGCAGTGGCTGCCTTCCCTTACTTGGCTTTGGCAATTTATCAAACAGTGCTCACGTGGGGTCTGAGATGGTTGCTTCCATCGTGCTTTTCGCTTCTTTCTTTGCTCTGCAATGCAGTGGGTGGAGTGGTGAGTCACCAGGGCAGGGGCAAAGGGCAGAGACCCAGAGAAGGCAAAGACAAAAATCACTGAAAGATCCACACACACATCCACATGGGTTTCTTACTCCTCCAAAAATTCTCTCTTTCTCGCCCTCAACTCAACTCAACTCTATCAATCTACTCAAACTCTTCTTCGCAGATGCCTTAAATTTTGCTAAATGGGGCGTCTTATTTACCGCCCCTTCCTCACCATCTTTTCTTAATTTGCTTACCCTTCGTACACTCCATCATTTTCCGCTTACTGCAAACTTCTGGGCTTTCATAACTGTACTTACTACCAGAAGTGACAACACACTATTCTCTTTCCCTTATGTTTACTTGATTTGTGCTCTGCCACTGCTTGCTTTGCCATTTCTGTAA

Protein sequence

MGFDLNVRKKRKWASVFDMKAGNGKGRHLNWQAFLEKRKPRASSGCLPLLGFGNLSNSAHVGSEMVASIVLFASFFALQCSGWSGESPGQGQRAETQRRQRQKSLKDPHTHPHGFLTPPKILSFSPSTQLNSINLLKLFFADALNFAKWGVLFTAPSSPSFLNLLTLRTLHHFPLTANFWAFITVLTTRSDNTLFSFPYVYLICALPLLALPFL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC11G217210.1CaUC11G217210.1mRNA