CaUC11G217110 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G217110
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Elf4 domain-containing protein
Location	Ciama_Chr11: 30606722 .. 30607147 (-)
RNA-Seq Expression	CaUC11G217110
Synteny	CaUC11G217110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTATGTTTGAATTTAAATTATGGAAATTGGAAGTAATTATTTATTTAATTAATATTATTGGAAGCAGGATTATTATTATAATTGGAAGTGATAATATGGAAGGGGAGATGAGATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAAGAATTTCGTTAAAGTTGAGAATATTTTAGACCAAAACAGATTGCTGATTAATGAAATTAACCAAAATCACGAGTCCAAATTGCCGGATAATCTCACCAAAAACGTCGCTCTAATTCGCGAGCTCAACAACAATATCAGAAGAGTTGTTGATTTGTACGCCGATCTCTCCACTTCCTTCACTAAATCCGTCGACCCTTCCGCCTCCGATGGAGACTCCGCCGCCGTGCCTGGCCACAAGCGCCACCGTCCTCCGCCCTAG

mRNA sequence

ATGATTATGTTTGAATTTAAATTATGGAAATTGGAAGTAATTATTTATTTAATTAATATTATTGGAAGCAGGATTATTATTATAATTGGAAGTGATAATATGGAAGGGGAGATGAGATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAAGAATTTCGTTAAAGTTGAGAATATTTTAGACCAAAACAGATTGCTGATTAATGAAATTAACCAAAATCACGAGTCCAAATTGCCGGATAATCTCACCAAAAACGTCGCTCTAATTCGCGAGCTCAACAACAATATCAGAAGAGTTGTTGATTTGTACGCCGATCTCTCCACTTCCTTCACTAAATCCGTCGACCCTTCCGCCTCCGATGGAGACTCCGCCGCCGTGCCTGGCCACAAGCGCCACCGTCCTCCGCCCTAG

Coding sequence (CDS)

ATGATTATGTTTGAATTTAAATTATGGAAATTGGAAGTAATTATTTATTTAATTAATATTATTGGAAGCAGGATTATTATTATAATTGGAAGTGATAATATGGAAGGGGAGATGAGATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAAGAATTTCGTTAAAGTTGAGAATATTTTAGACCAAAACAGATTGCTGATTAATGAAATTAACCAAAATCACGAGTCCAAATTGCCGGATAATCTCACCAAAAACGTCGCTCTAATTCGCGAGCTCAACAACAATATCAGAAGAGTTGTTGATTTGTACGCCGATCTCTCCACTTCCTTCACTAAATCCGTCGACCCTTCCGCCTCCGATGGAGACTCCGCCGCCGTGCCTGGCCACAAGCGCCACCGTCCTCCGCCCTAG

Protein sequence

MIMFEFKLWKLEVIIYLINIIGSRIIIIIGSDNMEGEMRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRPPP

Homology

[Close]

BLAST of CaUC11G217110 vs. NCBI nr
Match: XP_038890489.1 (protein ELF4-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 6.8e-37
Identity = 90/113 (79.65%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 34  MEGEM----RLWKG-REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLT 93
           MEGE      + KG REMDGKMV+TFQKNFV+VENILDQNRLLINEINQNHESK+P NLT
Sbjct: 1   MEGETLSSGGIGKGIREMDGKMVQTFQKNFVQVENILDQNRLLINEINQNHESKMPHNLT 60

Query: 94  KNVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRPPP 142
           +NV LIRELNNNIRRVVDLYADLSTSFTKS+D    DGDSA  PGHKR+RPPP
Sbjct: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTKSID----DGDSAVKPGHKRNRPPP 109

[Close]

BLAST of CaUC11G217110 vs. NCBI nr
Match: XP_022946747.1 (protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022999232.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999233.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999234.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999235.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >KAG7030507.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-35
Identity = 84/112 (75.00%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKR+RPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CaUC11G217110 vs. NCBI nr
Match: XP_023521403.1 (protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546933.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546934.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.9 bits (398), Expect = 6.4e-35
Identity = 84/112 (75.00%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM  TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAHTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKR+RPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CaUC11G217110 vs. NCBI nr
Match: KAG6599530.1 (Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 157.5 bits (397), Expect = 8.3e-35
Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 43  GREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIR 102
           GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +NV LIRELNNNIR
Sbjct: 4   GRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLARNVGLIRELNNNIR 63

Query: 103 RVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRPPP 142
           RVVDLYA LS SFTKS++ S S+G+SAA PGHKR+RPPP
Sbjct: 64  RVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 101

[Close]

BLAST of CaUC11G217110 vs. NCBI nr
Match: XP_016719642.1 (protein ELF4-LIKE 3-like [Gossypium hirsutum] >KAA3457890.1 protein ELF4-LIKE 3-like [Gossypium australe] >MBA0703389.1 hypothetical protein [Gossypium laxum] >MBA0820926.1 hypothetical protein [Gossypium armourianum] >MBA0846902.1 hypothetical protein [Gossypium schwendimanii] >KAG4136567.1 hypothetical protein ERO13_D07G014000v2 [Gossypium hirsutum])

HSP 1 Score: 147.5 bits (371), Expect = 8.6e-32
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 40  LWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNN 99
           L  G E+D K+V+TFQKNFV+V+NILDQNRLLINEINQNHE+K+PDNLT+NV LIRELNN
Sbjct: 9   LGNGGEIDTKVVQTFQKNFVQVQNILDQNRLLINEINQNHETKIPDNLTRNVGLIRELNN 68

Query: 100 NIRRVVDLYADLSTSFTKSVDPSASDGDSAAV---PGHKRHRP 140
           NIRRVVDLYADLSTS+TKS+D S+SDGDS       G+KR+RP
Sbjct: 69  NIRRVVDLYADLSTSYTKSMDASSSDGDSNGAMKSGGNKRNRP 111

[Close]

BLAST of CaUC11G217110 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 34  MEGE---MRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKN 93
           MEG+     +  G +MDGK+++TF+K+FV+V+NILD NRLLINEINQNHESK+PDNL +N
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 94  VALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRP 140
           V LIRELNNN+RRV  LY DLS +F+KS++ S S+GDS+   G++R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEAS-SEGDSSEGRGNRRIRP 108

[Close]

BLAST of CaUC11G217110 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 9.6e-26
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 34  MEGEMRLWKG--REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G    MDGK++++FQK+FV V++ILDQNRLLINEINQNHESK PDNL +NV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA 130
            LI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDAS-SEGESS 97

[Close]

BLAST of CaUC11G217110 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-24
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 34  MEGEMRLWKGR--EMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G   +MDGK+++ FQK+FV+V++ILDQNRLLINEINQNHESK  D+L +NV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS 129
            LIRELNNNIR V  LY DLS SF +SVD S S+G+S
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDAS-SEGES 100

[Close]

BLAST of CaUC11G217110 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.8e-15
Identity = 39/87 (44.83%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 47  DGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVD 106
           D  M E   +NF +V+++LD+NR LI ++N NH+S++ DN++KNVALI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 107 LYADLSTSFTKSVDPSASDGDSAAVPG 134
           +Y+DL+TSF+       +  D     G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGGGAAG 108

[Close]

BLAST of CaUC11G217110 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12
Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 47  DGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVD 106
           D ++ +T    F + +  LDQNR LI  +N+NH S++PDN+++NV LI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 107 LYADLSTSFTKSVDP---SASDGDS 129
           +Y+DLS +F K  D    +  DGD+
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDGDT 118

[Close]

BLAST of CaUC11G217110 vs. ExPASy TrEMBL
Match: A0A6J1KJ14 (protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.8e-35
Identity = 84/112 (75.00%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKR+RPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CaUC11G217110 vs. ExPASy TrEMBL
Match: A0A6J1G4K6 (protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.8e-35
Identity = 84/112 (75.00%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 34  MEGEM----RLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTK 93
           MEGE      +  GR+MDGKM +TFQKNFV+V+NILDQNRLLINEINQNHESK+PDNL +
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 94  NVALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRPPP 142
           NV LIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAA PGHKR+RPPP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEAS-SEGNSAAKPGHKRNRPPP 111

[Close]

BLAST of CaUC11G217110 vs. ExPASy TrEMBL
Match: F6HGP9 (Elf4 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g01370 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.4e-32
Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 33  NMEGE--MRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKN 92
           NMEG+    L  G ++DGK+++TFQK+FV+V+NILDQNRLLINEINQNHESK+PDNL++N
Sbjct: 35  NMEGDTFSGLGNGTQIDGKVLQTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRN 94

Query: 93  VALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAV------PGHKRHRP 140
           V LIRELNNNIRRVVDLYADLSTSFTKSVD S S+GDS+         GHKR+RP
Sbjct: 95  VGLIRELNNNIRRVVDLYADLSTSFTKSVDGS-SEGDSSGALRSDGKAGHKRNRP 148

[Close]

BLAST of CaUC11G217110 vs. ExPASy TrEMBL
Match: A0A6I9U178 (protein ELF4-LIKE 3 OS=Sesamum indicum OX=4182 GN=LOC105173664 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.2e-32
Identity = 80/112 (71.43%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 34  MEGE--MRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG+    L  G +MDGK++++FQK+FV+V+NILDQNRLLINEINQNHESK+PDNL++NV
Sbjct: 1   MEGDTFSGLGNGTQMDGKVLQSFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA----AVPGHKRHRP 140
            LIRELNNNIRRVVDLYADLSTSFTKS+D S S+GDS+       GHKRHRP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSMDAS-SEGDSSGGAYGKAGHKRHRP 111

[Close]

BLAST of CaUC11G217110 vs. ExPASy TrEMBL
Match: A0A1U8LYM5 (protein ELF4-LIKE 3-like OS=Gossypium hirsutum OX=3635 GN=LOC107932202 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.2e-32
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 40  LWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNN 99
           L  G E+D K+V+TFQKNFV+V+NILDQNRLLINEINQNHE+K+PDNLT+NV LIRELNN
Sbjct: 9   LGNGGEIDTKVVQTFQKNFVQVQNILDQNRLLINEINQNHETKIPDNLTRNVGLIRELNN 68

Query: 100 NIRRVVDLYADLSTSFTKSVDPSASDGDSAAV---PGHKRHRP 140
           NIRRVVDLYADLSTS+TKS+D S+SDGDS       G+KR+RP
Sbjct: 69  NIRRVVDLYADLSTSYTKSMDASSSDGDSNGAMKSGGNKRNRP 111

[Close]

BLAST of CaUC11G217110 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 127.5 bits (319), Expect = 8.6e-30
Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 34  MEGE---MRLWKGREMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKN 93
           MEG+     +  G +MDGK+++TF+K+FV+V+NILD NRLLINEINQNHESK+PDNL +N
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 94  VALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAVPGHKRHRP 140
           V LIRELNNN+RRV  LY DLS +F+KS++ S S+GDS+   G++R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEAS-SEGDSSEGRGNRRIRP 108

[Close]

BLAST of CaUC11G217110 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 117.9 bits (294), Expect = 6.8e-27
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 34  MEGEMRLWKG--REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G    MDGK++++FQK+FV V++ILDQNRLLINEINQNHESK PDNL +NV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA 130
            LI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDAS-SEGESS 97

[Close]

BLAST of CaUC11G217110 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 117.9 bits (294), Expect = 6.8e-27
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 34  MEGEMRLWKG--REMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G    MDGK++++FQK+FV V++ILDQNRLLINEINQNHESK PDNL +NV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA 130
            LI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDAS-SEGESS 97

[Close]

BLAST of CaUC11G217110 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-25
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 34  MEGEMRLWKGR--EMDGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNV 93
           MEG++    G   +MDGK+++ FQK+FV+V++ILDQNRLLINEINQNHESK  D+L +NV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 94  ALIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS 129
            LIRELNNNIR V  LY DLS SF +SVD S S+G+S
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDAS-SEGES 100

[Close]

BLAST of CaUC11G217110 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 82.0 bits (201), Expect = 4.1e-16
Identity = 39/87 (44.83%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 47  DGKMVETFQKNFVKVENILDQNRLLINEINQNHESKLPDNLTKNVALIRELNNNIRRVVD 106
           D  M E   +NF +V+++LD+NR LI ++N NH+S++ DN++KNVALI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 107 LYADLSTSFTKSVDPSASDGDSAAVPG 134
           +Y+DL+TSF+       +  D     G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGGGAAG 108

The following BLAST results are available for this feature:

BLAST of CaUC11G217110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890489.1	6.8e-37	79.65	protein ELF4-LIKE 3-like [Benincasa hispida]	[more]
XP_022946747.1	3.7e-35	75.00	protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE ...	[more]
XP_023521403.1	6.4e-35	75.00	protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1...	[more]
KAG6599530.1	8.3e-35	80.81	Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_016719642.1	8.6e-32	74.76	protein ELF4-LIKE 3-like [Gossypium hirsutum] >KAA3457890.1 protein ELF4-LIKE 3-...	[more]

BLAST of CaUC11G217110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F5	1.2e-28	61.47	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	9.6e-26	65.31	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	4.0e-24	63.92	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]
O04211	5.8e-15	44.83	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	2.1e-12	42.35	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]

BLAST of CaUC11G217110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJ14	1.8e-35	75.00	protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1	[more]
A0A6J1G4K6	1.8e-35	75.00	protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1	[more]
F6HGP9	2.4e-32	70.43	Elf4 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g01370 P...	[more]
A0A6I9U178	4.2e-32	71.43	protein ELF4-LIKE 3 OS=Sesamum indicum OX=4182 GN=LOC105173664 PE=3 SV=1	[more]
A0A1U8LYM5	4.2e-32	74.76	protein ELF4-LIKE 3-like OS=Gossypium hirsutum OX=3635 GN=LOC107932202 PE=3 SV=1	[more]

BLAST of CaUC11G217110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06255.1	8.6e-30	61.47	ELF4-like 3	[more]
AT1G17455.1	6.8e-27	65.31	ELF4-like 4	[more]
AT1G17455.2	6.8e-27	65.31	ELF4-like 4	[more]
AT1G72630.1	2.9e-25	63.92	ELF4-like 2	[more]
AT2G40080.1	4.1e-16	44.83	Protein of unknown function (DUF1313)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 46..124 e-value: 2.1E-38 score: 130.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..141
None	No IPR available	PANTHER	PTHR33469:SF17	PROTEIN ELF4-LIKE 3-LIKE	coord: 34..139
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 34..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G217110.1	CaUC11G217110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0042753	positive regulation of circadian rhythm
cellular_component	GO:0005634	nucleus