CaUC11G214210 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAATTTCAAGATCACAGACCAATTATCTTCCGTTCCCTAAACGGGATGGTCGACCCAATCTTCCAATGGTGTTCATCTTCAACTCCGTCACTGTTATCGTGTTAACGAATTTGTTTATTACCTTTTCTCTCGTTCTCGTAAATGGAAGTGGAACAAACAAAGAATATTATTCAAAAATTAGAAAATTAATATTGAAAAACCAGAGTCCCACAGAACTCGCAGATCTGCTCGTTTTTCGCTTCCTTACCTTTCGAATCTCCATTTTTCGTACTCATTGAGCTTTCAAAGCTTACTCCAAGGTAAGACACTCTTTTTCCCCCATCAATCGCTTCTTTCCCTTTTCAAATGTTGATTTTCTAATGTGGGGTTTGATTAGATTTGTAAATCTTGCCTTTGTCTGAGGATGAATTTTACTTTCTTAGCTTTTCTGGATGTTTTCCCGTTTTTTCTCTTGTTTGTATTGCTTTGTATTTAAGGGATGCTGTTTTCTTTCGAAATTTCTTCTGATTGTCGATTTGTGGGGTGTGTTCGTTTTCGGATCTAATTATTGAAGAAGCGTTTTATGTGGAACCCTAATGTTAACTTGGTGAATAGGGGAGAATGGTGTTTATTGTTGCTCTATGTCTTGATTATTTGGACTAAGCCTTGGATAGTTTTTATCGCATGCAGTTTGGTGGAAGCCCCTTGAAGGTTTTTGCTTCCAGGATCCCGAACATTCAATGTATTGGGGTTCTTTATGTAACATAATTTTTTGGGGATAATCAACATGCGTATTTTTGTGAATGTTATACAAAATGTGCAAGAAGTTGAATAACTTGTATGGGTCATATGCAGATAGTGAAGCTTTTGATATTCAATGGACGGGATAGGAGGTGAAACTGCCTCAGCGGCGGCACCGTTGAGCCAGTGGCAACATGATATTTCAAGGCTTTATCAATATTATCTGGATAAGACTACCCCACATTCTGTCTACAGATGGATTGGAACCCTTTTTGTAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGATTCTACATTGTTTCTTATGGTCTGGGCATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTAACTATGGAATTTCCCTCATGAGCTTTTGCATCCTTTGCCTGTTTGTGTTTGGTCGGTAAACTTTGAAGTTTGCTTTTTCTGTTGTTTCTTCATTACAAATCTGATTCTCAGTGTTCTGTTTGAGGTTTAAGTCTGGTACTGAAAACATGTCTAAACTTGGTGGCTTTTGGAGGGGAAATCATAGGCAGTGGTGAGGGAGGAAACTGGCAGTGAGGTGAGGTGCTCAGAATTGGGTTATGTTGTGCAAAACTATGTCCATCAAGTAATCTTGTTTGTTTTTCTTTTGTCCGTCATGACCACTACTCTTTGGTGCTTGTTGATGACGGGCTTTGCTCATTATGCATGCAGCAATGTTGAGATCCTGAATCCACATGGTCATGCTTATTTTCTTGCACCTGCCCCCAGTTACTTACATAGTTGTTGATATTTCAAGAATTAGGATGTAATTTGTAGAACAGGAAGAGGCATTTTCCTATGGCTCAGTAATTTAAAGAAGACAGGGAAAGATACAATTACTGTTAGGAAGAAGACTATATATTATCGGTTCTCATTGAAATTTGGATGGTTTTAGAGGAACCCTGGTCTCATTTAGCCTTATTAGTATTTACATACACTATACCCTTTATATTTGATCCTTTTTAGTGTATGCAAATACTTTCTTTCTACCTTTTATCCTTTTTCCTTTTTAGTTTCAATTCATTTCTTGTTCTTTCTATGTTTTTTTCTTGCTGGAGAACGTTCCTTGACATTATAGATGTCACTCAGTATGACAACAGTTCTAAAATATTAACCTCTTTGTTGGGTAATCGTAATTATCTCAAATATTGCCTAGAGGTGTAATGACGTAAACATGTTTACAAGATAATTGCTACTCCATCTTGCACCTAAGGGAAAGGCCTTACTCTAAGCTTCTTCCAGTTTATACCCATCAACAGAAAGACTTCCCTTGATTCCTTGAACTCTCCCTTTCTTATACTAATTTTTTTGGAAGCGCTCTGCCATCCCCTTCGGGTCATGCAAGGGTGTGAAACAGGGGTAATTACTTATTGTGGAATTTTGTAGACTTAAGAAATATTTTATCATTTGCCTCATGGTTTTTGATGGTAATGGACACTGTTACAGCACAGTTTTACTTGTGTGTTTATGGTAGTTCTTTTCTATTAATTGAATTTGAATCTTCAATTGATTACCATTTGCACTCTTCAGTGTCGAACTTCTTGTCAGACCCCATAACACCTTTCCTTTCGGAAGTTATCAAGTTTTTGTTTATTTCTCATATAAATGAAATTTTGTGTTTGTAGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTATTATGACCTTCTTTTCCATATTTGATGTTCCTGTCTTCTGGCCTATTTTACTATGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTTCACATATGATCAAGTACAAGTACATGCCATTTAGTCTTGGAAAGCAGGTGACTTATCAAATACTTCTTATGCATCACGCCGCTGTTTCTTTCTGCCCCATTTACCTTTTTCTAGCCTTCTAATGTCAGCGATTTACAAATGTAGTTCAGAGTTGTTAGACTTGCTTTTGACAAGTCTTTCCTGTTGAGGAAATAATTGTTTTTAGTAAAAAAAAATTTGATATTTTGCAGAAGTATGGTGGCAAGAAACCTTCTGCAAGTAGCGGCATCTCCAACGAGGATTGATACATGGCTTATTATTTACAGCAATTAGTACAAGTACTGAATTGAGGGAGAAATTAGAGACTTGGATATTCACAGTAGCAGAAATTTTTTTCATTGAAGTTACTTGTAGTTAAGATTGCTTGTGGATGATTTAATCATTGATGATGCACAGGACATGGTTATGCCAAATCCTTTATGATATAACTGAATAACTGCTGTTGTAGAAACTCTCAGTTTAATACACGTCGTAATCCGGTCCGTGCGCAGGGCGTCATTTGAATTTTTTGTTTGCTGTTTCTGATTCATCTTCCCCCCCTTTGTTCTGGCCCTGCTGTGGACAATTTAAGCTGATAGTTGCAGTTGTTCTTGTAGAATTTCCCCAATCACTTGTGTGTTGGAACTTTGTGCGTCTATATTGATAATGATGTTGAGAGTA AGAATTTCAAGATCACAGACCAATTATCTTCCGTTCCCTAAACGGGATGGTCGACCCAATCTTCCAATGGTGTTCATCTTCAACTCCGTCACTGTTATCGTGTTAACGAATTTGTTTATTACCTTTTCTCTCGTTCTCGTAAATGGAAGTGGAACAAACAAAGAATATTATTCAAAAATTAGAAAATTAATATTGAAAAACCAGAGTCCCACAGAACTCGCAGATCTGCTCGTTTTTCGCTTCCTTACCTTTCGAATCTCCATTTTTCGTACTCATTGAGCTTTCAAAGCTTACTCCAAGTTTGGTGGAAGCCCCTTGAAGGTTTTTGCTTCCAGGATCCCGAACATTCAATATAGTGAAGCTTTTGATATTCAATGGACGGGATAGGAGGTGAAACTGCCTCAGCGGCGGCACCGTTGAGCCAGTGGCAACATGATATTTCAAGGCTTTATCAATATTATCTGGATAAGACTACCCCACATTCTGTCTACAGATGGATTGGAACCCTTTTTGTAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGATTCTACATTGTTTCTTATGGTCTGGGCATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTTTAAGTCTGGTACTGAAAACATGTCTAAACTTGGTGGCTTTTGGAGGGGAAATCATAGGCAGTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTATTATGACCTTCTTTTCCATATTTGATGTTCCTGTCTTCTGGCCTATTTTACTATGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTTCACATATGATCAAGTACAAGTACATGCCATTTAGTCTTGGAAAGCAGGTGACTTATCAAATACTTCTTATGCATCACGCCGCTGTTTCTTTCTGCCCCATTTACCTTTTTCTAGCCTTCTAATGTCAGCGATTTACAAATGTAGTTCAGAGTTGTTAGACTTGCTTTTGACAAGTCTTTCCTGTTGAGGAAATAATTGTTTTTAGTAAAAAAAAATTTGATATTTTGCAGAAGTATGGTGGCAAGAAACCTTCTGCAAGTAGCGGCATCTCCAACGAGGATTGATACATGGCTTATTATTTACAGCAATTAGTACAAGTACTGAATTGAGGGAGAAATTAGAGACTTGGATATTCACAGTAGCAGAAATTTTTTTCATTGAAGTTACTTGTAGTTAAGATTGCTTGTGGATGATTTAATCATTGATGATGCACAGGACATGGTTATGCCAAATCCTTTATGATATAACTGAATAACTGCTGTTGTAGAAACTCTCAGTTTAATACACGTCGTAATCCGGTCCGTGCGCAGGGCGTCATTTGAATTTTTTGTTTGCTGTTTCTGATTCATCTTCCCCCCCTTTGTTCTGGCCCTGCTGTGGACAATTTAAGCTGATAGTTGCAGTTGTTCTTGTAGAATTTCCCCAATCACTTGTGTGTTGGAACTTTGTGCGTCTATATTGATAATGATGTTGAGAGTA ATGGACGGGATAGGAGGTGAAACTGCCTCAGCGGCGGCACCGTTGAGCCAGTGGCAACATGATATTTCAAGGCTTTATCAATATTATCTGGATAAGACTACCCCACATTCTGTCTACAGATGGATTGGAACCCTTTTTGTAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGATTCTACATTGTTTCTTATGGTCTGGGCATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTTTAAGTCTGGTACTGAAAACATGTCTAAACTTGGTGGCTTTTGGAGGGGAAATCATAGGCAGTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTATTATGACCTTCTTTTCCATATTTGATGTTCCTGTCTTCTGGCCTATTTTACTATGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTTCACATATGATCAAGTACAAGTACATGCCATTTAGTCTTGGAAAGCAGGTGACTTATCAAATACTTCTTATGCATCACGCCGCTGTTTCTTTCTGCCCCATTTACCTTTTTCTAGCCTTCTAA MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHSVYRWIGTLFVVAIYALRVFYVQGFYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWFKSGTENMSKLGGFWRGNHRQWYSFTKAFCIAFIMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYMPFSLGKQVTYQILLMHHAAVSFCPIYLFLAF Homology
BLAST of CaUC11G214210 vs. NCBI nr
Match: XP_022947776.1 (protein RER1A-like [Cucurbita moschata]) HSP 1 Score: 342.0 bits (876), Expect = 3.8e-90 Identity = 173/199 (86.93%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. NCBI nr
Match: XP_031737202.1 (protein RER1A isoform X2 [Cucumis sativus]) HSP 1 Score: 341.3 bits (874), Expect = 6.4e-90 Identity = 171/203 (84.24%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of CaUC11G214210 vs. NCBI nr
Match: XP_031737201.1 (protein RER1A isoform X1 [Cucumis sativus]) HSP 1 Score: 341.3 bits (874), Expect = 6.4e-90 Identity = 171/203 (84.24%), Postives = 177/203 (87.19%), Query Frame = 0
BLAST of CaUC11G214210 vs. NCBI nr
Match: XP_023533159.1 (protein RER1A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 340.9 bits (873), Expect = 8.4e-90 Identity = 172/199 (86.43%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. NCBI nr
Match: XP_023007341.1 (protein RER1A-like [Cucurbita maxima]) HSP 1 Score: 340.9 bits (873), Expect = 8.4e-90 Identity = 172/199 (86.43%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy Swiss-Prot
Match: O48670 (Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.5e-73 Identity = 140/200 (70.00%), Postives = 157/200 (78.50%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy Swiss-Prot
Match: O48671 (Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2) HSP 1 Score: 274.6 bits (701), Expect = 9.7e-73 Identity = 136/199 (68.34%), Postives = 156/199 (78.39%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy Swiss-Prot
Match: Q9ZWI7 (Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.7e-51 Identity = 101/193 (52.33%), Postives = 134/193 (69.43%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy Swiss-Prot
Match: Q9ZPV7 (Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2) HSP 1 Score: 200.7 bits (509), Expect = 1.8e-50 Identity = 101/189 (53.44%), Postives = 128/189 (67.72%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy Swiss-Prot
Match: A5PJ65 (Protein RER1 OS=Bos taurus OX=9913 GN=RER1 PE=2 SV=2) HSP 1 Score: 179.9 bits (455), Expect = 3.2e-44 Identity = 96/204 (47.06%), Postives = 134/204 (65.69%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy TrEMBL
Match: A0A6J1G7E1 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111451535 PE=3 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.8e-90 Identity = 173/199 (86.93%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy TrEMBL
Match: A0A6J1L096 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111499866 PE=3 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 4.1e-90 Identity = 172/199 (86.43%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy TrEMBL
Match: A0A6J1FS15 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111448292 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 9.0e-90 Identity = 171/199 (85.93%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy TrEMBL
Match: A0A6J1CY56 (Protein RER1 OS=Momordica charantia OX=3673 GN=LOC111015523 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 5.8e-89 Identity = 169/199 (84.92%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. ExPASy TrEMBL
Match: A0A6J1JGI9 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111484302 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.7e-88 Identity = 169/199 (84.92%), Postives = 175/199 (87.94%), Query Frame = 0
BLAST of CaUC11G214210 vs. TAIR 10
Match: AT4G39220.1 (Rer1 family protein ) HSP 1 Score: 277.3 bits (708), Expect = 1.1e-74 Identity = 140/200 (70.00%), Postives = 157/200 (78.50%), Query Frame = 0
BLAST of CaUC11G214210 vs. TAIR 10
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B ) HSP 1 Score: 274.6 bits (701), Expect = 6.9e-74 Identity = 136/199 (68.34%), Postives = 156/199 (78.39%), Query Frame = 0
BLAST of CaUC11G214210 vs. TAIR 10
Match: AT2G23310.1 (Rer1 family protein ) HSP 1 Score: 203.4 bits (516), Expect = 1.9e-52 Identity = 101/193 (52.33%), Postives = 134/193 (69.43%), Query Frame = 0
BLAST of CaUC11G214210 vs. TAIR 10
Match: AT2G23310.2 (Rer1 family protein ) HSP 1 Score: 203.4 bits (516), Expect = 1.9e-52 Identity = 101/193 (52.33%), Postives = 134/193 (69.43%), Query Frame = 0
BLAST of CaUC11G214210 vs. TAIR 10
Match: AT2G18240.1 (Rer1 family protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.3e-51 Identity = 101/189 (53.44%), Postives = 128/189 (67.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|