CaUC11G213410 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC11G213410
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr11: 26562790 .. 26564772 (+)
RNA-Seq ExpressionCaUC11G213410
SyntenyCaUC11G213410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATATTCATGGCGACTGCTTCGATTACGAGCTCATTTTCGCTCTCACCTCCGCATTTCATCCAACTCCTCACATTTTCAGGTACTTTCCCATCCCAATCTGCAATCACTTCGCTCCCTATCATCACTGCTTCCTAAGCATCCCCTTCACCACACGGCGTCGCCGCCCATTTCCGATTCTCACTTCACGAGTATCGTGAAACCTAGATACGGCACGCTTCGAACGTTCTCCTCCGAGCCGGCGGCTGAACAGGAGTCTGATCACACTGTTGTGGTTCACATTTTCTCTAAATCTCGCGATGTGGATGAAATTAGGAAAGATTTAGAGTCGAATGGTATTGTTATTAGTCATGATTTGGTGTTGGAGGTATTGGGGAAGCTCGAATCGAATCCTGACGGTGCTATCAGGTTTTTCGATTGGGTTTCGGGGGATTATGGTGAGAAACTTAGCTCCAAGTCGTATAACTTGATGCTGGGGATCCTAGGTGTTAATGGCCTTGTTAAGGAGTTTTGGGATTTGAACTGCAATATGAAGAAAAAGGGTTATGGGATTTCTAAAACTGTACGGGATAAGGTGTTGGAGAAGTTTGAGAAGGATGGTTTGGAGAGTGAAGCTGAGAAGTTGAGAGATGTGTATGCATCAGGATCCATAGACAAGTCCCCGGAGAAGATTGGTTCTATCGTCTGCAAACTTGTCAGGAACAATGTGTGGGGAGAGGATGTTGAGCAGCAATTGCGTGATATGAGTGTTTCATTTTCAAGTGATATGGTTAAGATGATATTGGAGAATCTTTGCACAGAACCGGCTAAAGCATTTATATTTTTCCGATGGATTGGTGAGAGTGAGATGTTTAAGCATGATGAGCAAACTTATAATGCCATGGCTAGGGTGTTAGGAAGGGAAGATTGTATAGATAGATTCTGGAAAGTAGTAGATGAAATGAGGAGCCATGGTTACGAAATGGAAGTGGAGACATTTGCCAAGGTTTTGGGACGATTTTGTAAAAGAAGAATGCTTGAGGAAGCTGTAAATTTGTATGTGTTTGCAATGGCAGGAGGTAACAAGCCTTCAATGGATTGTCTAACTTTTCTGTTAAAGAAAATAGCAGTTAGTAAGCACTTAGATCTAGATCTATTCTCAAGGACATTGAAGATATTTTCAGAGACAGGTAATGTGTTGACGGATTCAATGGTTTTTGCAGTTCTCAAGTCTCTGTCTACTGTTGGTAGGATTGGAGAGTACAATGAGGTTTTAAATATAATGAAAGAGTATGGATATGTATTTAGTGGTGGTATGCAGAGAAAGGTAGCATTTCGACTCAGTAAGACTGGAAAAAGTGATGAAGCTAATGACTTCATGAATAGCTTAGAAGCTTCTGGATGTAATCCAGACAACAAGACCTGGGCATCTTTGATTGAAGGGCATTGTGCTGCTGGAGATCTTGCTAAGGCTTCTGATTGTATCCACAAAATGGTTGAAAAAGGAGGAGTCCCTTCTGCTGGATATGCTTTGGATTTAATAGTAAATGCTTACTGTCAAAAGAAACGTGAAACTGATGCTAGCCATCTTCTCTTCGATCTTGTTGATGAAAAGCAGCTAAAACCACGACATTCTACTTACAAAACATTGATAAACAAGCTACTGCTCCGAGGGGAATTCAAAGAAGCTTTGAAATTGTTGGGGATGATGAGAAATCATGAATTCCCACCATTTATTGAACCATTTATCTCATATGTATCGAAGTCTGGAACAGCTGATGATGCCATTGGTTTCTTAAAGGGCATGACATCAAAGAAATTTCCTTCTACGTCAGTGGTTCTCCATTTGTTTGAAGCGTTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACTTTCTTTCAAAATGCCCCGGTTACATTCGTAACCATGCTGATGTTTTGGATCTTTTTTATTCCATGAAGCCTGTAGAAGCTGCTGCTCCCCCAAATCTGGCTTCTTAG

mRNA sequence

ATGAGATATTCATGGCGACTGCTTCGATTACGAGCTCATTTTCGCTCTCACCTCCGCATTTCATCCAACTCCTCACATTTTCAGGTACTTTCCCATCCCAATCTGCAATCACTTCGCTCCCTATCATCACTGCTTCCTAAGCATCCCCTTCACCACACGGCGTCGCCGCCCATTTCCGATTCTCACTTCACGAGTATCGTGAAACCTAGATACGGCACGCTTCGAACGTTCTCCTCCGAGCCGGCGGCTGAACAGGAGTCTGATCACACTGTTGTGGTTCACATTTTCTCTAAATCTCGCGATGTGGATGAAATTAGGAAAGATTTAGAGTCGAATGGTATTGTTATTAGTCATGATTTGGTGTTGGAGGTATTGGGGAAGCTCGAATCGAATCCTGACGGTGCTATCAGGTTTTTCGATTGGGTTTCGGGGGATTATGGTGAGAAACTTAGCTCCAAGTCGTATAACTTGATGCTGGGGATCCTAGGTGTTAATGGCCTTGTTAAGGAGTTTTGGGATTTGAACTGCAATATGAAGAAAAAGGGTTATGGGATTTCTAAAACTGTACGGGATAAGGTGTTGGAGAAGTTTGAGAAGGATGGTTTGGAGAGTGAAGCTGAGAAGTTGAGAGATGTGTATGCATCAGGATCCATAGACAAGTCCCCGGAGAAGATTGGTTCTATCGTCTGCAAACTTGTCAGGAACAATGTGTGGGGAGAGGATGTTGAGCAGCAATTGCGTGATATGAGTGTTTCATTTTCAAGTGATATGGTTAAGATGATATTGGAGAATCTTTGCACAGAACCGGCTAAAGCATTTATATTTTTCCGATGGATTGGTGAGAGTGAGATGTTTAAGCATGATGAGCAAACTTATAATGCCATGGCTAGGGTGTTAGGAAGGGAAGATTGTATAGATAGATTCTGGAAAGTAGTAGATGAAATGAGGAGCCATGGTTACGAAATGGAAGTGGAGACATTTGCCAAGGTTTTGGGACGATTTTGTAAAAGAAGAATGCTTGAGGAAGCTGTAAATTTGTATGTGTTTGCAATGGCAGGAGGTAACAAGCCTTCAATGGATTGTCTAACTTTTCTGTTAAAGAAAATAGCAGTTAGTAAGCACTTAGATCTAGATCTATTCTCAAGGACATTGAAGATATTTTCAGAGACAGGTAATGTGTTGACGGATTCAATGGTTTTTGCAGTTCTCAAGTCTCTGTCTACTGTTGGTAGGATTGGAGAGTACAATGAGGTTTTAAATATAATGAAAGAGTATGGATATGTATTTAGTGGTGGTATGCAGAGAAAGGTAGCATTTCGACTCAGTAAGACTGGAAAAAGTGATGAAGCTAATGACTTCATGAATAGCTTAGAAGCTTCTGGATGTAATCCAGACAACAAGACCTGGGCATCTTTGATTGAAGGGCATTGTGCTGCTGGAGATCTTGCTAAGGCTTCTGATTGTATCCACAAAATGGTTGAAAAAGGAGGAGTCCCTTCTGCTGGATATGCTTTGGATTTAATAGTAAATGCTTACTGTCAAAAGAAACGTGAAACTGATGCTAGCCATCTTCTCTTCGATCTTGTTGATGAAAAGCAGCTAAAACCACGACATTCTACTTACAAAACATTGATAAACAAGCTACTGCTCCGAGGGGAATTCAAAGAAGCTTTGAAATTGTTGGGGATGATGAGAAATCATGAATTCCCACCATTTATTGAACCATTTATCTCATATGTATCGAAGTCTGGAACAGCTGATGATGCCATTGGTTTCTTAAAGGGCATGACATCAAAGAAATTTCCTTCTACGTCAGTGGTTCTCCATTTGTTTGAAGCGTTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACTTTCTTTCAAAATGCCCCGGTTACATTCGTAACCATGCTGATGTTTTGGATCTTTTTTATTCCATGAAGCCTGTAGAAGCTGCTGCTCCCCCAAATCTGGCTTCTTAG

Coding sequence (CDS)

ATGAGATATTCATGGCGACTGCTTCGATTACGAGCTCATTTTCGCTCTCACCTCCGCATTTCATCCAACTCCTCACATTTTCAGGTACTTTCCCATCCCAATCTGCAATCACTTCGCTCCCTATCATCACTGCTTCCTAAGCATCCCCTTCACCACACGGCGTCGCCGCCCATTTCCGATTCTCACTTCACGAGTATCGTGAAACCTAGATACGGCACGCTTCGAACGTTCTCCTCCGAGCCGGCGGCTGAACAGGAGTCTGATCACACTGTTGTGGTTCACATTTTCTCTAAATCTCGCGATGTGGATGAAATTAGGAAAGATTTAGAGTCGAATGGTATTGTTATTAGTCATGATTTGGTGTTGGAGGTATTGGGGAAGCTCGAATCGAATCCTGACGGTGCTATCAGGTTTTTCGATTGGGTTTCGGGGGATTATGGTGAGAAACTTAGCTCCAAGTCGTATAACTTGATGCTGGGGATCCTAGGTGTTAATGGCCTTGTTAAGGAGTTTTGGGATTTGAACTGCAATATGAAGAAAAAGGGTTATGGGATTTCTAAAACTGTACGGGATAAGGTGTTGGAGAAGTTTGAGAAGGATGGTTTGGAGAGTGAAGCTGAGAAGTTGAGAGATGTGTATGCATCAGGATCCATAGACAAGTCCCCGGAGAAGATTGGTTCTATCGTCTGCAAACTTGTCAGGAACAATGTGTGGGGAGAGGATGTTGAGCAGCAATTGCGTGATATGAGTGTTTCATTTTCAAGTGATATGGTTAAGATGATATTGGAGAATCTTTGCACAGAACCGGCTAAAGCATTTATATTTTTCCGATGGATTGGTGAGAGTGAGATGTTTAAGCATGATGAGCAAACTTATAATGCCATGGCTAGGGTGTTAGGAAGGGAAGATTGTATAGATAGATTCTGGAAAGTAGTAGATGAAATGAGGAGCCATGGTTACGAAATGGAAGTGGAGACATTTGCCAAGGTTTTGGGACGATTTTGTAAAAGAAGAATGCTTGAGGAAGCTGTAAATTTGTATGTGTTTGCAATGGCAGGAGGTAACAAGCCTTCAATGGATTGTCTAACTTTTCTGTTAAAGAAAATAGCAGTTAGTAAGCACTTAGATCTAGATCTATTCTCAAGGACATTGAAGATATTTTCAGAGACAGGTAATGTGTTGACGGATTCAATGGTTTTTGCAGTTCTCAAGTCTCTGTCTACTGTTGGTAGGATTGGAGAGTACAATGAGGTTTTAAATATAATGAAAGAGTATGGATATGTATTTAGTGGTGGTATGCAGAGAAAGGTAGCATTTCGACTCAGTAAGACTGGAAAAAGTGATGAAGCTAATGACTTCATGAATAGCTTAGAAGCTTCTGGATGTAATCCAGACAACAAGACCTGGGCATCTTTGATTGAAGGGCATTGTGCTGCTGGAGATCTTGCTAAGGCTTCTGATTGTATCCACAAAATGGTTGAAAAAGGAGGAGTCCCTTCTGCTGGATATGCTTTGGATTTAATAGTAAATGCTTACTGTCAAAAGAAACGTGAAACTGATGCTAGCCATCTTCTCTTCGATCTTGTTGATGAAAAGCAGCTAAAACCACGACATTCTACTTACAAAACATTGATAAACAAGCTACTGCTCCGAGGGGAATTCAAAGAAGCTTTGAAATTGTTGGGGATGATGAGAAATCATGAATTCCCACCATTTATTGAACCATTTATCTCATATGTATCGAAGTCTGGAACAGCTGATGATGCCATTGGTTTCTTAAAGGGCATGACATCAAAGAAATTTCCTTCTACGTCAGTGGTTCTCCATTTGTTTGAAGCGTTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACTTTCTTTCAAAATGCCCCGGTTACATTCGTAACCATGCTGATGTTTTGGATCTTTTTTATTCCATGAAGCCTGTAGAAGCTGCTGCTCCCCCAAATCTGGCTTCTTAG

Protein sequence

MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISDSHFTSIVKPRYGTLRTFSSEPAAEQESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHDLVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKKKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGEDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVLGREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMDCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVLNIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAGDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHSTYKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSKKFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLAS
Homology
[Close]
BLAST of CaUC11G213410 vs. NCBI nr
Match: XP_038890460.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 607/660 (91.97%), Postives = 628/660 (95.15%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MR+SWRLLRLRAHFRS LRISSNSSHFQVLSHPNLQSLRSLSSL PKHP+HHTASPPISD
Sbjct: 1   MRHSWRLLRLRAHFRSQLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPVHHTASPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHDL 120
           SHF SIVKP YGT RTFSSEPAAEQESD TVVV IFSKSRDVDEIRK LE NG VISH L
Sbjct: 61  SHFKSIVKPIYGTPRTFSSEPAAEQESDRTVVVDIFSKSRDVDEIRKGLELNGTVISHGL 120

Query: 121 VLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKK 180
           VLEVLGKLESNPD AIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKK
Sbjct: 121 VLEVLGKLESNPDCAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKK 180

Query: 181 KGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGE 240
           KGYGISKTVRDKVLEKFEKDGLESEAEKLRDV+ASGSID+SPEKIG IV +L+R NVWGE
Sbjct: 181 KGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSIDRSPEKIGLIVYRLIRKNVWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMV+MILE+LCTEP KA IFFRWI ES MFKHD+QTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVQMILEDLCTEPTKALIFFRWIDESGMFKHDKQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMD 360
           REDCIDRFWKV DEMRSHGYEM+VETFAKVLGRFCKRRM+EEAVNLYVFAMAGGNKPS D
Sbjct: 301 REDCIDRFWKVADEMRSHGYEMDVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSAD 360

Query: 361 CLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVLN 420
           CLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSL++VGRIGE+NEV N
Sbjct: 361 CLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLTSVGRIGEFNEVFN 420

Query: 421 IMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAG 480
           +MKEYGYV SGG++RKVA+RLS+TGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMKEYGYVSSGGLKRKVAYRLSRTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHST 540
           DLAKASDCIHKMVEKGGV SAGYALDLIVN YCQKK ETDASHLL +LVDEKQLKPRHST
Sbjct: 481 DLAKASDCIHKMVEKGGVSSAGYALDLIVNGYCQKKLETDASHLLVNLVDEKQLKPRHST 540

Query: 541 YKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSKK 600
           YKTLINKLLLRG+FKEALKLLGMMRNHEFPPFIEPFISYVSK GTADDAIGFLKGMTSKK
Sbjct: 541 YKTLINKLLLRGKFKEALKLLGMMRNHEFPPFIEPFISYVSKFGTADDAIGFLKGMTSKK 600

Query: 601 FPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLAS 660
           FPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEA  P  LAS
Sbjct: 601 FPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAPPPQKLAS 660

[Close]
BLAST of CaUC11G213410 vs. NCBI nr
Match: KAG7016081.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 598/661 (90.47%), Postives = 621/661 (93.95%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLRAHFRS LRISSN+SHFQV S  NLQSLR LSSLLPKHP+H TASPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRISSNASHFQVHSDSNLQSLRFLSSLLPKHPVHGTASPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQ-ESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
           S FTSIVK RYGT RTFSSE   EQ ESDH VV  IFSKSRDVDEIRKDLESNGIVISHD
Sbjct: 61  SQFTSIVKSRYGTPRTFSSESVIEQKESDHAVVFDIFSKSRDVDEIRKDLESNGIVISHD 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           LVLEVLGKLESNPD AIRFF+WVSGDYGEKLSSKSYNLMLGILGVN  V+EFWDLNC+MK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGDYGEKLSSKSYNLMLGILGVNDHVREFWDLNCDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDV+ASGS DKSPEKIGSIVCKLVRNNVWG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILENLCT+PAKAFIFFRWIGES MFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSM 360
           GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRM+EEAVNLYVFAMAGGNKPS+
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVSKHLDLDLFSRTLK+F+ETGNVLTDSMV AVLKSLSTVGRIGEY EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVSAVLKSLSTVGRIGEYTEVL 420

Query: 421 NIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAA 480
           N+MKEYGY FSG ++RKVA+RLS+TGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHS 540
           GDLA ASDCIHKMVEKG V SAGYALDLI+NAYCQK+RETDASHLL DLVD KQLKP HS
Sbjct: 481 GDLAMASDCIHKMVEKGDVSSAGYALDLIINAYCQKRRETDASHLLSDLVDGKQLKPWHS 540

Query: 541 TYKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSK 600
           TYK LINKLL RGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGT+DDAIGFLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTSDDAIGFLKAMTSK 600

Query: 601 KFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLA 660
           +FPSTSV LHLFEAFFQAGRHGDAQDFLSKCP  IRNHADVL+LFYSMKPVEAAA PNLA
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CaUC11G213410 vs. NCBI nr
Match: KAG6578521.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 597/661 (90.32%), Postives = 621/661 (93.95%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLRAHFRS LRISSN+SHFQV S  NLQSLR LSSLLPKHP+H TASPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRISSNASHFQVHSDSNLQSLRFLSSLLPKHPVHGTASPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQ-ESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
           S FTSIVK RYGT RTFSSE   EQ ESDH VV  IFSKSRDVDEIRKDLESNGIVISHD
Sbjct: 61  SQFTSIVKSRYGTPRTFSSESVIEQKESDHAVVFDIFSKSRDVDEIRKDLESNGIVISHD 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           LVLEVLGKLESNPD AIRFF+WVSGDYGEKLSSKSYNLMLGILGVN  V+EFWDLNC+MK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGDYGEKLSSKSYNLMLGILGVNDHVREFWDLNCDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDV+ASGS DKSPEKIGS+VCKLVRNNVWG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSVVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILENLCT+PAKAFIFFRWIGES MFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSM 360
           GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRM+EEAVNLYVFAMAGGNKPS+
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVSKHLDLDLFSRTLK+F+ETGNVLTDSMV AVLKSLSTVGRIGEY EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVSAVLKSLSTVGRIGEYTEVL 420

Query: 421 NIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAA 480
           N+MKEYGY FSG ++RKVA+RLS+TGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHS 540
           GDLA ASDCIHKMVEKG V SAGYALDLI+NAYCQK+RETDASHLL DLVD KQLKP HS
Sbjct: 481 GDLAMASDCIHKMVEKGDVSSAGYALDLIINAYCQKRRETDASHLLSDLVDGKQLKPWHS 540

Query: 541 TYKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSK 600
           TYK LINKLL RGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGT+DDAIGFLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTSDDAIGFLKAMTSK 600

Query: 601 KFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLA 660
           +FPSTSV LHLFEAFFQAGRHGDAQDFLSKCP  IRNHADVL+LFYSMKPVEAAA PNLA
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CaUC11G213410 vs. NCBI nr
Match: XP_022992918.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucurbita maxima] >XP_022992919.1 pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1181.4 bits (3055), Expect = 0.0e+00
Identity = 595/661 (90.02%), Postives = 621/661 (93.95%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLRAHFRS LR+SSN+SHFQV S PNLQ++R LSSLLPKHP+H TASPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRVSSNASHFQVHSDPNLQTIRFLSSLLPKHPVHGTASPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQ-ESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
           S FTSIVK RYGT RTFSSE   EQ ES+H VV  IFSKSRDVDEIRKDLE NGIVISHD
Sbjct: 61  SQFTSIVKYRYGTPRTFSSESVIEQKESNHAVVFDIFSKSRDVDEIRKDLELNGIVISHD 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           LVLEVLGKLESNPD AIRFF+WVSG+YGEKLSSKSYNLMLGILGVN  VKEFWDLNC+MK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGEYGEKLSSKSYNLMLGILGVNDHVKEFWDLNCDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDV+ASGS DKSPEKIGSIVCKLVRNNVWG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILENLCT+PAKAFIFFRWI ES MFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIEESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSM 360
           GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRM+EEAVNLYVFAMAGGNKPS+
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVSKHLDLDLFSRTLK+F+ETGNVLTDSMVFAVLKSLS VGRIGEY EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVFAVLKSLSAVGRIGEYTEVL 420

Query: 421 NIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAA 480
           N+MKEYGY FSG ++RKVA+RLS+TGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHS 540
           GDLA ASDCIHKMV+KG V SAGYALDLIVNAYCQKKRETDASHLL +LVD KQLKPRHS
Sbjct: 481 GDLAMASDCIHKMVDKGDVSSAGYALDLIVNAYCQKKRETDASHLLSELVDGKQLKPRHS 540

Query: 541 TYKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSK 600
           TYK LINKLL RGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600

Query: 601 KFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLA 660
           +FPSTSV LHLFEAFFQAGRHGDAQDFLSKCP  IRNHADVL+LFYSMKPVEAAA PNLA
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CaUC11G213410 vs. NCBI nr
Match: XP_023550224.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1179.5 bits (3050), Expect = 0.0e+00
Identity = 597/661 (90.32%), Postives = 618/661 (93.49%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLRAHFRS LRISSN+SHFQV S PNLQSLR LSSLLPKHP+H TASPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRISSNASHFQVHSDPNLQSLRFLSSLLPKHPVHGTASPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQ-ESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
           S FTSIVK RYG  RTFSSE   EQ ESDH VV  IFSKSRDVDEIRKDLESNGIVISHD
Sbjct: 61  SQFTSIVKSRYGIPRTFSSESVIEQKESDHAVVFDIFSKSRDVDEIRKDLESNGIVISHD 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           LVLEVLGKLESNPD AIRFF+WVSGDYGEKLSSKSYNLMLGILGVN  VKEFWDLNC+MK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGDYGEKLSSKSYNLMLGILGVNDHVKEFWDLNCDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDV+ASGS DKSPEKIGSIVCKLVRNNVWG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILENLCT+PAKAFIFFRWIGES MFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSM 360
           GRED IDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRM+EEAVNLYVFAMAGGNKPS+
Sbjct: 301 GREDSIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVSKHLDLDLFSRTLK+F+ETGNVLTDSMV AVLKSLSTVGRIGEY EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVSAVLKSLSTVGRIGEYTEVL 420

Query: 421 NIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAA 480
           N+MKEYGY FSG ++RKVA+RL +TGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLGRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHS 540
           GDLA ASDCIHKMVEKG V SAGYALDLIVNAYCQ++RETDASHLL DLVD KQLKP HS
Sbjct: 481 GDLAMASDCIHKMVEKGDVSSAGYALDLIVNAYCQRRRETDASHLLSDLVDGKQLKPWHS 540

Query: 541 TYKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSK 600
           TYK LINKLL RGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600

Query: 601 KFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLA 660
           +FPSTSV LHLFEAFFQAGRHGDAQDFLSKCP  IRNHADVL+LFYSMKPVE AA PNLA
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEDAASPNLA 660

[Close]
BLAST of CaUC11G213410 vs. ExPASy Swiss-Prot
Match: Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 5.8e-182
Identity = 343/657 (52.21%), Postives = 449/657 (68.34%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRY WR L  R++  S     S+ S FQV+S+    S RS SS      LH         
Sbjct: 1   MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSF-----LHERFGVQQRQ 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQE-SDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
             F           R FSSE A E++    TVV+ +FS+    DEI K+L+SN +VISH+
Sbjct: 61  CLFALRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHE 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           L L VL +LES+PD A RFF W    Y +KLSSKSYN ML I GVNGLV EFW L  +MK
Sbjct: 121 LALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKG+G+S  VRD+V +KF+KDGLE++ E+L++++ASGS+D S +K+ + VCK+V   VWG
Sbjct: 181 KKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
            DVE+QLRD+ + F SD+VKM+LE L  +P KA +FFRWI ES  FKHDE+TYNAMARVL
Sbjct: 241 ADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAG--GNKP 360
           G+E  +DRF  +++E+RS GYEME+ET+ +V  RFC+ +M++EAV L+ FAMAG   N P
Sbjct: 301 GKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTP 360

Query: 361 SMDCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNE 420
           +  C + LLKKI  +K LD+DLF+RTLK ++  GNV+ D M+  VLKSL +V R G+ NE
Sbjct: 361 TPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNE 420

Query: 421 VLNIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHC 480
           VL  M E GYV SG +Q  +A  LS+ GK DEAN+ +N +EASG + D+K  ASL+EGHC
Sbjct: 421 VLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHC 480

Query: 481 AAGDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPR 540
            A DL +AS+C  KM+ K GV  AGYA + +V AYC   +  D   L  +LV + QLKP 
Sbjct: 481 DAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPW 540

Query: 541 HSTYKTLINKLLLR-----GEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGF 600
           HSTYK ++  LL++     G F+EAL LL MMRNH FPPF++PF+ Y+S SGT+ +A  F
Sbjct: 541 HSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAF 600

Query: 601 LKGMTSKKFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKP 650
           LK +TSKKFPS S+VL +FEA  ++ RH +AQD LS  P YIR +A+VL+LF +MKP
Sbjct: 601 LKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKP 648

[Close]
BLAST of CaUC11G213410 vs. ExPASy Swiss-Prot
Match: Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 2.4e-180
Identity = 344/678 (50.74%), Postives = 460/678 (67.85%), Query Frame = 0 

Query: 1   MRY-SWRLLRLRAHFRSHL-------RISSNSSH-FQVLSHPNLQSLRSLSSLLPKHPLH 60
           MRY  WRL+ LR++ RSHL       +++S SS  F    HP + +L+    L P     
Sbjct: 1   MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCP----- 60

Query: 61  HTASPPISDSHFTSIVKPRYGTLRTFSSEPAAEQESD-HTVVVHIFSKSRDVDEIRKDLE 120
              SP  S  +    V       R+FSSEPA E++S     V+ IFS+    DEIRK+LE
Sbjct: 61  -LRSPMTSSGNLVKSVG------RSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELE 120

Query: 121 SNGIVISHDLVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKE 180
           S+G+VIS DL L+VL KLESNPD A  FF W+     E+LSSK+YN+ML ILG NGLV E
Sbjct: 121 SSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDE 180

Query: 181 FWDLNCNMKKKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVC 240
           FW L   MKKKG+G+S  VRDKV +KF+KDGLES+  +LR ++ S  +D S E +   VC
Sbjct: 181 FWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVC 240

Query: 241 KLVRNNVWGEDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQ 300
           K+V    WG+DVE+++RD++V F SD+VKMI+E L  EP KA +FFRWI ES++FKHDE+
Sbjct: 241 KIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEK 300

Query: 301 TYNAMARVLGREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFA 360
           TYNAMARVLG+E  +DRF  +V EMRS GYE+E+ET+ +V  RFC+ ++++EAV+L+  A
Sbjct: 301 TYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIA 360

Query: 361 MAG---GNKPSMDCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLS 420
           MAG    N P+  C   LLKKI  +K LD+DLFSR +K++++ GN LTDS++ +VLKSL 
Sbjct: 361 MAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLR 420

Query: 421 TVGRIGEYNEVLNIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNK 480
           +V R+ + NE+L  MK  GYV SG MQ  +A  LS+ GK DEA++F++ +E+SG N D+K
Sbjct: 421 SVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDK 480

Query: 481 TWASLIEGHCAAGDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFD 540
             ASL+EG+C +G+L +A  C  KMV   GV  A Y+ + +V AYC K +  DA  LL  
Sbjct: 481 AMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSA 540

Query: 541 LVDEKQLKPRHSTYKTLINKLLLR-----GEFKEALKLLGMMRNHEFPPFIEPFISYVSK 600
            V + QLKPRHSTYK+L+  LL +     G F+EAL LL +M++H FPPFI+PF+SY S 
Sbjct: 541 QVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSS 600

Query: 601 SGTADDAIGFLKGMTSKKFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLD 660
           +G + +A+GFLK MTS  FP  SVVL +FE   ++ RH +AQD LS CP YIRN+ DVL+
Sbjct: 601 TGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLE 660

[Close]
BLAST of CaUC11G213410 vs. ExPASy Swiss-Prot
Match: Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-90
Identity = 195/573 (34.03%), Postives = 309/573 (53.93%), Query Frame = 0 

Query: 75  RTFSSEPAAEQESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHDLVLEVLGKLESNPDG 134
           RTFSS+P +  +    V+ + +SK     E+ + L    + ++H+  + VL KLE  P+ 
Sbjct: 54  RTFSSKPDSMLQ---LVLENDWSK-----EVEEGLRKPDMSLTHETAIYVLRKLEKYPEK 113

Query: 135 AIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKKKGYGISKTVRDKVL 194
           A  F DWV  D G   S+  Y++ML IL     +K FW     MK+ G+ + +     + 
Sbjct: 114 AYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIY 173

Query: 195 EKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGEDVEQQLRDMSVSFS 254
            +  K+  +++A  +   Y     + +   +   V  +V    W  +VE++L++M +  S
Sbjct: 174 GELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLS 233

Query: 255 SDMVKMILENLCTEPAKAFIFFRWI---GESEMFKHDEQTYNAMARVLGREDCIDRFWKV 314
            + V  +L+ L   P KA  FF W+   G S  ++H   TYNA  RVL R + +  FW V
Sbjct: 234 DNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 293

Query: 315 VDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMDCLTFLLKKIAV 374
           VDEM++ GY+M+++T+ KV  +F K RM+ E V LY + M G  KPS+   + LL+ ++ 
Sbjct: 294 VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSG 353

Query: 375 SKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVLNIMKEYGYVFSG 434
           S + DLDL  R  + +  TG  L+ ++   + +SL++VGR  E  E+   M+  GY    
Sbjct: 354 SPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDN 413

Query: 435 GMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAGDLAKASDCIHK 494
               ++ F L K  + +EA   ++ +EA GC PD KTW  LI+GHC   +L KA  C   
Sbjct: 414 ITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFAN 473

Query: 495 MVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHSTYKTLINKLLLR 554
           M+EK G       LD++++ +    +   AS  L ++V    +KP  STYK LI+KLL  
Sbjct: 474 MLEK-GFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKI 533

Query: 555 GEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSKKFPSTSVVLHLF 614
            + +EAL LL MM+   +P + E F  Y++K GT +DA  FL  ++SK  PS +   H+ 
Sbjct: 534 KKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVI 593

Query: 615 EAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLF 645
           EAF++ GR  DA++ L  CP + + H  + +LF
Sbjct: 594 EAFYREGRLTDAKNLLFICPHHFKTHPKISELF 617

[Close]
BLAST of CaUC11G213410 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-20
Identity = 120/539 (22.26%), Postives = 232/539 (43.04%), Query Frame = 0 

Query: 77  FSSEPAAEQESDHTVVVHIFSKSRDVDEIRK---DLESNGIVISHD---LVLEVLGKLES 136
           FS EPA  +E     ++    +S   D+++K   D++S+   +      +++E   + E 
Sbjct: 79  FSPEPALYEE-----ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFEL 138

Query: 137 NPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKKKGYGISKTVR 196
             D  +   DW+  ++G K  +  YN ML +L V+G   +  +++ + K   +GI   V 
Sbjct: 139 Q-DEILSVVDWMIDEFGLKPDTHFYNRMLNLL-VDGNSLKLVEIS-HAKMSVWGIKPDVS 198

Query: 197 D-KVLEK--FEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGE-DVEQQL 256
              VL K       L      L D+ + G +         +   +   ++ G   + +Q+
Sbjct: 199 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 258

Query: 257 RDMSVSFSSDMVKMILENLCTE--PAKAFIFFRWIGESEMFKHDEQTYNAMARVLGREDC 316
            +   S+S+  V +I+   C E     A  F + +   + F  D+ T+N +   L +   
Sbjct: 259 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 318

Query: 317 IDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMDCLTF 376
           +    +++D M   GY+ +V T+  V+   CK   ++EAV +    +     P+      
Sbjct: 319 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 378

Query: 377 LLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVF-AVLKSLSTVGRIGEYNEVLNIMK 436
           L+  +   K   ++  +   ++ +  G +L D   F ++++ L          E+   M+
Sbjct: 379 LISTLC--KENQVEEATELARVLTSKG-ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 438

Query: 437 EYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAGDLA 496
             G          +   L   GK DEA + +  +E SGC     T+ +LI+G C A    
Sbjct: 439 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 498

Query: 497 KASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHSTYKT 556
           +A +   +M E  GV       + +++  C+ +R  DA+ L+  ++ E Q KP   TY +
Sbjct: 499 EAEEIFDEM-EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNS 558

Query: 557 LINKLLLRGEFKEALKLLGMMRNHEFPPFIEPF---ISYVSKSGTADDAIGFLKGMTSK 600
           L+      G+ K+A  ++  M ++   P I  +   IS + K+G  + A   L+ +  K
Sbjct: 559 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604

[Close]
BLAST of CaUC11G213410 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-19
Identity = 114/482 (23.65%), Postives = 197/482 (40.87%), Query Frame = 0 

Query: 127 KLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKKKGYGIS 186
           +L  N   ++  F W     G + S   Y +++G LG NG  K    L   MK +G    
Sbjct: 86  ELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFK 145

Query: 187 KTVRDKVLEKFEKDGLESEAEKL----RDVYASGSIDKSPEKIGSIV----CKLVRNNVW 246
           +++   ++  ++K G   +  +L    R+VY+     KS   +  I+    C  V  NV+
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205

Query: 247 GEDVEQQLRDMSVSFSSDMVKMILENLC--TEPAKAFIFFRWIGESEMFKH----DEQTY 306
            + + +++     +F      ++++  C   E   A    R     +M KH    +   Y
Sbjct: 206 YDMLSRKIPPTLFTFG-----VVMKAFCAVNEIDSALSLLR-----DMTKHGCVPNSVIY 265

Query: 307 NAMARVLGREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMA 366
             +   L + + ++   ++++EM   G   + ETF  V+   CK   + EA  +    + 
Sbjct: 266 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 325

Query: 367 GGNKPSMDCLTFLLKKIAVSKHLDL--DLFSRTLK----IFS-------------ETGNV 426
            G  P      +L+  +     +D   DLF R  K    IF+             +   V
Sbjct: 326 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 385

Query: 427 LTDSMV-FAVLKSLSTV----------GRIGEYNEVLNIMKEYGYVFSGGMQRKVAFRLS 486
           L+D +  + ++  + T           G +G   EVL+ M+  G   +      +     
Sbjct: 386 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 445

Query: 487 KTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAGDLAKASDCIHKMVEKGGVPSAG 546
           K GK DEA + +N + A G  P+   +  LI   C    + +A +   +M  KG  P   
Sbjct: 446 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV- 505

Query: 547 YALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHSTYKTLINKLLLRGEFKEALKLLG 565
           Y  + +++  C+      A  LL D++ E  +     TY TLIN  L RGE KEA KL+ 
Sbjct: 506 YTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVN 555

[Close]
BLAST of CaUC11G213410 vs. ExPASy TrEMBL
Match: A0A6J1JYT4 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111489108 PE=4 SV=1)

HSP 1 Score: 1181.4 bits (3055), Expect = 0.0e+00
Identity = 595/661 (90.02%), Postives = 621/661 (93.95%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLRAHFRS LR+SSN+SHFQV S PNLQ++R LSSLLPKHP+H TASPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRVSSNASHFQVHSDPNLQTIRFLSSLLPKHPVHGTASPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQ-ESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
           S FTSIVK RYGT RTFSSE   EQ ES+H VV  IFSKSRDVDEIRKDLE NGIVISHD
Sbjct: 61  SQFTSIVKYRYGTPRTFSSESVIEQKESNHAVVFDIFSKSRDVDEIRKDLELNGIVISHD 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           LVLEVLGKLESNPD AIRFF+WVSG+YGEKLSSKSYNLMLGILGVN  VKEFWDLNC+MK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGEYGEKLSSKSYNLMLGILGVNDHVKEFWDLNCDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDV+ASGS DKSPEKIGSIVCKLVRNNVWG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILENLCT+PAKAFIFFRWI ES MFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIEESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSM 360
           GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRM+EEAVNLYVFAMAGGNKPS+
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVSKHLDLDLFSRTLK+F+ETGNVLTDSMVFAVLKSLS VGRIGEY EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVFAVLKSLSAVGRIGEYTEVL 420

Query: 421 NIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAA 480
           N+MKEYGY FSG ++RKVA+RLS+TGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHS 540
           GDLA ASDCIHKMV+KG V SAGYALDLIVNAYCQKKRETDASHLL +LVD KQLKPRHS
Sbjct: 481 GDLAMASDCIHKMVDKGDVSSAGYALDLIVNAYCQKKRETDASHLLSELVDGKQLKPRHS 540

Query: 541 TYKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSK 600
           TYK LINKLL RGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600

Query: 601 KFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLA 660
           +FPSTSV LHLFEAFFQAGRHGDAQDFLSKCP  IRNHADVL+LFYSMKPVEAAA PNLA
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CaUC11G213410 vs. ExPASy TrEMBL
Match: A0A6J1FJW5 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111444701 PE=4 SV=1)

HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 596/661 (90.17%), Postives = 618/661 (93.49%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLRAHFRS LRISSN+SHFQV S PNLQSLR LSSLLPKHP+H TASPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRISSNASHFQVHSDPNLQSLRFLSSLLPKHPVHGTASPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQ-ESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
           S  TSIVK RYGT RTFSSE   EQ ESDH VV  IFSKSRDVDEIRKDLESNGIVISHD
Sbjct: 61  SQCTSIVKSRYGTPRTFSSESVIEQKESDHAVVFDIFSKSRDVDEIRKDLESNGIVISHD 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           LVLEVLGKLESNPD AIRFF+WVSGDYGEKLSSKSYNLMLGILGVN  V EFWDLNC+MK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGDYGEKLSSKSYNLMLGILGVNDHVGEFWDLNCDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDV+ASGS DKSPEKIGSIVCKLVRNNVWG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
           +DVEQQL DM+VSFSSDMVKMILENLCT+PAKAFIFFRWIGES MFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLCDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSM 360
           GREDCIDRFWKVVDEMRSHGYEM VETFAKVLGRFCKRRM+EEAVNLYVFAMAGGNKPS+
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMGVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVL 420
           DCLTFLLKKIAVSKHLDLDLFSRTLK+F+ETGNVLTDSMV AVLKSLSTVGRIGEY EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVSAVLKSLSTVGRIGEYTEVL 420

Query: 421 NIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAA 480
           N+MKEYGY FSG ++RKVA+RLS+TGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHS 540
           GDLA ASDCIHKMVEKG V +AGYALDLI+NAYCQK+RETDASHLL DLVD KQLKP HS
Sbjct: 481 GDLAMASDCIHKMVEKGDVSNAGYALDLIINAYCQKRRETDASHLLSDLVDGKQLKPWHS 540

Query: 541 TYKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSK 600
           TYK LINKLL RGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600

Query: 601 KFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLA 660
           +FPSTSV LHLFEAFFQAGRHGDAQDFLSKCP  IRNHADVL+LFYSMKPVEAAA PNLA
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CaUC11G213410 vs. ExPASy TrEMBL
Match: A0A5A7TD41 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002110 PE=4 SV=1)

HSP 1 Score: 1167.5 bits (3019), Expect = 0.0e+00
Identity = 579/660 (87.73%), Postives = 619/660 (93.79%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLR +FRSH RISSNSSHFQVLSHPNLQSLRSLSSL PKHP+H T SPPISD
Sbjct: 1   MRYSWRLLRLRPYFRSHFRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPVHDTPSPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHDL 120
            HFTSIV P YGTLRTFSSEPAAEQESDH V+V IFSKSRDVDEIRK LESNG+VISHDL
Sbjct: 61  FHFTSIVGPIYGTLRTFSSEPAAEQESDHAVIVDIFSKSRDVDEIRKGLESNGVVISHDL 120

Query: 121 VLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKK 180
           VLEVLG+LESNPDGAIRFFDWVSGDYGEKLSSKS+NLMLGILGVNG VKEFWDLNC+MKK
Sbjct: 121 VLEVLGQLESNPDGAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGFVKEFWDLNCDMKK 180

Query: 181 KGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGE 240
           KGYGISKTVRDKVLEKF+KDGL+S+AEKLRDV+ASGS+DKSPEKIGS V +LVR N+WGE
Sbjct: 181 KGYGISKTVRDKVLEKFDKDGLKSDAEKLRDVFASGSVDKSPEKIGSTVSRLVRKNLWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMVKMILE+L T+PAKA+IFF WIGE+ MFKHDEQTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVKMILEDLKTDPAKAYIFFLWIGETGMFKHDEQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMD 360
           REDCIDRFWKVVDEM++ GY+ME+ETFAKVLGRFCKRRM+EEAVNLYVFAM  GNKPS D
Sbjct: 301 REDCIDRFWKVVDEMKNQGYKMEMETFAKVLGRFCKRRMIEEAVNLYVFAMTVGNKPSED 360

Query: 361 CLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVLN 420
           CLTFLLKKIAVS+H DLDLFSR LKIFSE+GNVL DSMVFAVLKSLS+VGR GE+NEVLN
Sbjct: 361 CLTFLLKKIAVSEHFDLDLFSRALKIFSESGNVLKDSMVFAVLKSLSSVGRTGEFNEVLN 420

Query: 421 IMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAG 480
           +M EYGYVFSGG++RK+A+RLS+ GKSDEANDFMN+LEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMIEYGYVFSGGLKRKIAYRLSRKGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHST 540
           DL KASDCIHKMVEKGGVPSA YALDLIVN YC+KKRETDASHLLFDLVD+ QLKPRHST
Sbjct: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCRKKRETDASHLLFDLVDKNQLKPRHST 540

Query: 541 YKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSKK 600
           YKTLINKLLL GEFK+ALKLLG+MRNHEFPPFIEPFISYVSKSGTADDA+ FLKGMTSKK
Sbjct: 541 YKTLINKLLLCGEFKDALKLLGLMRNHEFPPFIEPFISYVSKSGTADDALEFLKGMTSKK 600

Query: 601 FPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLAS 660
           FPST+VVL LFEAFFQAGRHGDAQD LS CP YIRNHADVLDLF SMKPVEAAA  NLAS
Sbjct: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLSNCPRYIRNHADVLDLFCSMKPVEAAASANLAS 660

[Close]
BLAST of CaUC11G213410 vs. ExPASy TrEMBL
Match: A0A1S3C9Q1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103498583 PE=4 SV=1)

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 579/660 (87.73%), Postives = 616/660 (93.33%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRYSWRLLRLR HFRSH RISSNSSH QVLSHPNLQSLRSLSSL PKHP+H T SPPISD
Sbjct: 1   MRYSWRLLRLRPHFRSHFRISSNSSHCQVLSHPNLQSLRSLSSLFPKHPVHDTPSPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHDL 120
            HFTSIV P YGTLRTFSSEPAAEQESDH V+V IFSKSRDVDEIRK LESNG+VISHDL
Sbjct: 61  FHFTSIVGPIYGTLRTFSSEPAAEQESDHAVIVDIFSKSRDVDEIRKGLESNGVVISHDL 120

Query: 121 VLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKK 180
           VLEVLG+LESNPDGAIRFFDWVSGDYGEKLSSKS+N MLGILGVNG VKEFWDLNC+MKK
Sbjct: 121 VLEVLGQLESNPDGAIRFFDWVSGDYGEKLSSKSFNSMLGILGVNGFVKEFWDLNCDMKK 180

Query: 181 KGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGE 240
           KGYGISKTVRDKVLEKF+KDGL+S+AEKLRDV+ASGS+DKSPEKIGS V +LVR N+WGE
Sbjct: 181 KGYGISKTVRDKVLEKFDKDGLKSDAEKLRDVFASGSVDKSPEKIGSTVSRLVRKNLWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMVKMILE+L T+PAKA+IFF WIGES MFKHDEQTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVKMILEDLKTDPAKAYIFFLWIGESGMFKHDEQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMD 360
           REDCIDRFWKVVDEM+S GY+ME+ETFAKVLGRFCKRRM+EEAVNLYVFAM  GNKPS D
Sbjct: 301 REDCIDRFWKVVDEMKSQGYKMEMETFAKVLGRFCKRRMIEEAVNLYVFAMTVGNKPSED 360

Query: 361 CLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVLN 420
           CLTFLLKKIAVS+H DLDLFSR LKIFSE+GNVL DSMVFAVLKSLS+VGR GE+NEVLN
Sbjct: 361 CLTFLLKKIAVSEHFDLDLFSRALKIFSESGNVLKDSMVFAVLKSLSSVGRTGEFNEVLN 420

Query: 421 IMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAG 480
           +M EYGYVFSGG++RK+A+RLS+ GKSDEANDFMN+LEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMIEYGYVFSGGLKRKIAYRLSRKGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHST 540
           DL KASDCIHKMVEKGGVPSA YALDLIVN YC+KKRETDASHLLFDLVD+ QLKPRHST
Sbjct: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCRKKRETDASHLLFDLVDKNQLKPRHST 540

Query: 541 YKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSKK 600
           YKTLINKLLL GEFK+ALKLLG+MRNHEFPPFIEPFISYVSKSGTADDA+ FLKGMTSKK
Sbjct: 541 YKTLINKLLLCGEFKDALKLLGLMRNHEFPPFIEPFISYVSKSGTADDALEFLKGMTSKK 600

Query: 601 FPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLAS 660
           FPST+VVL LFEAFFQAGRHGDAQD LS CP YIRNHADVLDLF SMKPVEAA   NLAS
Sbjct: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLSNCPRYIRNHADVLDLFCSMKPVEAAVSANLAS 660

[Close]
BLAST of CaUC11G213410 vs. ExPASy TrEMBL
Match: A0A0A0KSL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643230 PE=4 SV=1)

HSP 1 Score: 1145.6 bits (2962), Expect = 0.0e+00
Identity = 571/660 (86.52%), Postives = 612/660 (92.73%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MR+SWRLLRL    R HLRISSNSSHFQVLSHPNLQSLRSLSSL PKHPLHHT SPPISD
Sbjct: 1   MRFSWRLLRL----RPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHDL 120
            +FTSIV+P YGTLRTFSSEPAAEQESDH V+V I SKSRDVDEIRK LESNG+VISHDL
Sbjct: 61  FYFTSIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDL 120

Query: 121 VLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKK 180
           VLEVLG+LESNPD AIRFFDWVSGDYGEKLSSKS+NLMLGILGVNGLVK+FWDLNC+MKK
Sbjct: 121 VLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKK 180

Query: 181 KGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGE 240
           KGYG+SKTVRDKVLEKF+KDGL+SEAEKLRD++ASGS DKSP+ IGS V +L+R N+WGE
Sbjct: 181 KGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMVKMILE+L T+PAKA+IFF WI ES MFKHDEQTYNAMA VLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMATVLG 300

Query: 301 REDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMD 360
           REDCIDRFWKVVDEMRS GY+ME+ETF KVLGRFCKRRM+EEAVNLYVFAM+ G+KPS D
Sbjct: 301 REDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSED 360

Query: 361 CLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVLN 420
           CLTFLLKKIAVS+  DLDLFSR LKIFSE+GNVL DSMVFAVL+SLS+VGR GE+NEVLN
Sbjct: 361 CLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLN 420

Query: 421 IMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAG 480
           +MKEYGYV SGG++RKVA+RLS+TGKSDEANDFMN+LEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHST 540
           DL KASDCIHKMVEKGGVPSA YALDLIVN YCQKK ETDASHLLFDLVD+ QLKPRHST
Sbjct: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHST 540

Query: 541 YKTLINKLLLRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSKK 600
           YKTLINKLLL GEFK+ALKLLGMMRNHEFPPFIEPFISYVSKSGTADD + FLKGMTSKK
Sbjct: 541 YKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKK 600

Query: 601 FPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAAAPPNLAS 660
           FPST+VVL LFEAFFQAGRHGDAQD L KCPGYIRNHADVLDLF SMKPVEAAA PNL S
Sbjct: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 656

[Close]
BLAST of CaUC11G213410 vs. TAIR 10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 639.0 bits (1647), Expect = 4.1e-183
Identity = 343/657 (52.21%), Postives = 449/657 (68.34%), Query Frame = 0 

Query: 1   MRYSWRLLRLRAHFRSHLRISSNSSHFQVLSHPNLQSLRSLSSLLPKHPLHHTASPPISD 60
           MRY WR L  R++  S     S+ S FQV+S+    S RS SS      LH         
Sbjct: 1   MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSF-----LHERFGVQQRQ 60

Query: 61  SHFTSIVKPRYGTLRTFSSEPAAEQE-SDHTVVVHIFSKSRDVDEIRKDLESNGIVISHD 120
             F           R FSSE A E++    TVV+ +FS+    DEI K+L+SN +VISH+
Sbjct: 61  CLFALRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHE 120

Query: 121 LVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMK 180
           L L VL +LES+PD A RFF W    Y +KLSSKSYN ML I GVNGLV EFW L  +MK
Sbjct: 121 LALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMK 180

Query: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWG 240
           KKG+G+S  VRD+V +KF+KDGLE++ E+L++++ASGS+D S +K+ + VCK+V   VWG
Sbjct: 181 KKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQTYNAMARVL 300
            DVE+QLRD+ + F SD+VKM+LE L  +P KA +FFRWI ES  FKHDE+TYNAMARVL
Sbjct: 241 ADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAG--GNKP 360
           G+E  +DRF  +++E+RS GYEME+ET+ +V  RFC+ +M++EAV L+ FAMAG   N P
Sbjct: 301 GKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTP 360

Query: 361 SMDCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNE 420
           +  C + LLKKI  +K LD+DLF+RTLK ++  GNV+ D M+  VLKSL +V R G+ NE
Sbjct: 361 TPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNE 420

Query: 421 VLNIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHC 480
           VL  M E GYV SG +Q  +A  LS+ GK DEAN+ +N +EASG + D+K  ASL+EGHC
Sbjct: 421 VLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHC 480

Query: 481 AAGDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPR 540
            A DL +AS+C  KM+ K GV  AGYA + +V AYC   +  D   L  +LV + QLKP 
Sbjct: 481 DAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPW 540

Query: 541 HSTYKTLINKLLLR-----GEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGF 600
           HSTYK ++  LL++     G F+EAL LL MMRNH FPPF++PF+ Y+S SGT+ +A  F
Sbjct: 541 HSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAF 600

Query: 601 LKGMTSKKFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKP 650
           LK +TSKKFPS S+VL +FEA  ++ RH +AQD LS  P YIR +A+VL+LF +MKP
Sbjct: 601 LKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKP 648

[Close]
BLAST of CaUC11G213410 vs. TAIR 10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 633.6 bits (1633), Expect = 1.7e-181
Identity = 344/678 (50.74%), Postives = 460/678 (67.85%), Query Frame = 0 

Query: 1   MRY-SWRLLRLRAHFRSHL-------RISSNSSH-FQVLSHPNLQSLRSLSSLLPKHPLH 60
           MRY  WRL+ LR++ RSHL       +++S SS  F    HP + +L+    L P     
Sbjct: 1   MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCP----- 60

Query: 61  HTASPPISDSHFTSIVKPRYGTLRTFSSEPAAEQESD-HTVVVHIFSKSRDVDEIRKDLE 120
              SP  S  +    V       R+FSSEPA E++S     V+ IFS+    DEIRK+LE
Sbjct: 61  -LRSPMTSSGNLVKSVG------RSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELE 120

Query: 121 SNGIVISHDLVLEVLGKLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKE 180
           S+G+VIS DL L+VL KLESNPD A  FF W+     E+LSSK+YN+ML ILG NGLV E
Sbjct: 121 SSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDE 180

Query: 181 FWDLNCNMKKKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVC 240
           FW L   MKKKG+G+S  VRDKV +KF+KDGLES+  +LR ++ S  +D S E +   VC
Sbjct: 181 FWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVC 240

Query: 241 KLVRNNVWGEDVEQQLRDMSVSFSSDMVKMILENLCTEPAKAFIFFRWIGESEMFKHDEQ 300
           K+V    WG+DVE+++RD++V F SD+VKMI+E L  EP KA +FFRWI ES++FKHDE+
Sbjct: 241 KIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEK 300

Query: 301 TYNAMARVLGREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFA 360
           TYNAMARVLG+E  +DRF  +V EMRS GYE+E+ET+ +V  RFC+ ++++EAV+L+  A
Sbjct: 301 TYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIA 360

Query: 361 MAG---GNKPSMDCLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLS 420
           MAG    N P+  C   LLKKI  +K LD+DLFSR +K++++ GN LTDS++ +VLKSL 
Sbjct: 361 MAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLR 420

Query: 421 TVGRIGEYNEVLNIMKEYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNK 480
           +V R+ + NE+L  MK  GYV SG MQ  +A  LS+ GK DEA++F++ +E+SG N D+K
Sbjct: 421 SVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDK 480

Query: 481 TWASLIEGHCAAGDLAKASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFD 540
             ASL+EG+C +G+L +A  C  KMV   GV  A Y+ + +V AYC K +  DA  LL  
Sbjct: 481 AMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSA 540

Query: 541 LVDEKQLKPRHSTYKTLINKLLLR-----GEFKEALKLLGMMRNHEFPPFIEPFISYVSK 600
            V + QLKPRHSTYK+L+  LL +     G F+EAL LL +M++H FPPFI+PF+SY S 
Sbjct: 541 QVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSS 600

Query: 601 SGTADDAIGFLKGMTSKKFPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLD 660
           +G + +A+GFLK MTS  FP  SVVL +FE   ++ RH +AQD LS CP YIRN+ DVL+
Sbjct: 601 TGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLE 660

[Close]
BLAST of CaUC11G213410 vs. TAIR 10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 334.7 bits (857), Expect = 1.7e-91
Identity = 195/573 (34.03%), Postives = 309/573 (53.93%), Query Frame = 0 

Query: 75  RTFSSEPAAEQESDHTVVVHIFSKSRDVDEIRKDLESNGIVISHDLVLEVLGKLESNPDG 134
           RTFSS+P +  +    V+ + +SK     E+ + L    + ++H+  + VL KLE  P+ 
Sbjct: 54  RTFSSKPDSMLQ---LVLENDWSK-----EVEEGLRKPDMSLTHETAIYVLRKLEKYPEK 113

Query: 135 AIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKKKGYGISKTVRDKVL 194
           A  F DWV  D G   S+  Y++ML IL     +K FW     MK+ G+ + +     + 
Sbjct: 114 AYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIY 173

Query: 195 EKFEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGEDVEQQLRDMSVSFS 254
            +  K+  +++A  +   Y     + +   +   V  +V    W  +VE++L++M +  S
Sbjct: 174 GELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLS 233

Query: 255 SDMVKMILENLCTEPAKAFIFFRWI---GESEMFKHDEQTYNAMARVLGREDCIDRFWKV 314
            + V  +L+ L   P KA  FF W+   G S  ++H   TYNA  RVL R + +  FW V
Sbjct: 234 DNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 293

Query: 315 VDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMDCLTFLLKKIAV 374
           VDEM++ GY+M+++T+ KV  +F K RM+ E V LY + M G  KPS+   + LL+ ++ 
Sbjct: 294 VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSG 353

Query: 375 SKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLSTVGRIGEYNEVLNIMKEYGYVFSG 434
           S + DLDL  R  + +  TG  L+ ++   + +SL++VGR  E  E+   M+  GY    
Sbjct: 354 SPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDN 413

Query: 435 GMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAGDLAKASDCIHK 494
               ++ F L K  + +EA   ++ +EA GC PD KTW  LI+GHC   +L KA  C   
Sbjct: 414 ITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFAN 473

Query: 495 MVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHSTYKTLINKLLLR 554
           M+EK G       LD++++ +    +   AS  L ++V    +KP  STYK LI+KLL  
Sbjct: 474 MLEK-GFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKI 533

Query: 555 GEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKGMTSKKFPSTSVVLHLF 614
            + +EAL LL MM+   +P + E F  Y++K GT +DA  FL  ++SK  PS +   H+ 
Sbjct: 534 KKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVI 593

Query: 615 EAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLF 645
           EAF++ GR  DA++ L  CP + + H  + +LF
Sbjct: 594 EAFYREGRLTDAKNLLFICPHHFKTHPKISELF 617

[Close]
BLAST of CaUC11G213410 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 1.4e-21
Identity = 120/539 (22.26%), Postives = 232/539 (43.04%), Query Frame = 0 

Query: 77  FSSEPAAEQESDHTVVVHIFSKSRDVDEIRK---DLESNGIVISHD---LVLEVLGKLES 136
           FS EPA  +E     ++    +S   D+++K   D++S+   +      +++E   + E 
Sbjct: 79  FSPEPALYEE-----ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFEL 138

Query: 137 NPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKKKGYGISKTVR 196
             D  +   DW+  ++G K  +  YN ML +L V+G   +  +++ + K   +GI   V 
Sbjct: 139 Q-DEILSVVDWMIDEFGLKPDTHFYNRMLNLL-VDGNSLKLVEIS-HAKMSVWGIKPDVS 198

Query: 197 D-KVLEK--FEKDGLESEAEKLRDVYASGSIDKSPEKIGSIVCKLVRNNVWGE-DVEQQL 256
              VL K       L      L D+ + G +         +   +   ++ G   + +Q+
Sbjct: 199 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 258

Query: 257 RDMSVSFSSDMVKMILENLCTE--PAKAFIFFRWIGESEMFKHDEQTYNAMARVLGREDC 316
            +   S+S+  V +I+   C E     A  F + +   + F  D+ T+N +   L +   
Sbjct: 259 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 318

Query: 317 IDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMAGGNKPSMDCLTF 376
           +    +++D M   GY+ +V T+  V+   CK   ++EAV +    +     P+      
Sbjct: 319 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 378

Query: 377 LLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVF-AVLKSLSTVGRIGEYNEVLNIMK 436
           L+  +   K   ++  +   ++ +  G +L D   F ++++ L          E+   M+
Sbjct: 379 LISTLC--KENQVEEATELARVLTSKG-ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 438

Query: 437 EYGYVFSGGMQRKVAFRLSKTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAGDLA 496
             G          +   L   GK DEA + +  +E SGC     T+ +LI+G C A    
Sbjct: 439 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 498

Query: 497 KASDCIHKMVEKGGVPSAGYALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHSTYKT 556
           +A +   +M E  GV       + +++  C+ +R  DA+ L+  ++ E Q KP   TY +
Sbjct: 499 EAEEIFDEM-EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNS 558

Query: 557 LINKLLLRGEFKEALKLLGMMRNHEFPPFIEPF---ISYVSKSGTADDAIGFLKGMTSK 600
           L+      G+ K+A  ++  M ++   P I  +   IS + K+G  + A   L+ +  K
Sbjct: 559 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604

[Close]
BLAST of CaUC11G213410 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-20
Identity = 114/482 (23.65%), Postives = 197/482 (40.87%), Query Frame = 0 

Query: 127 KLESNPDGAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKKKGYGIS 186
           +L  N   ++  F W     G + S   Y +++G LG NG  K    L   MK +G    
Sbjct: 86  ELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFK 145

Query: 187 KTVRDKVLEKFEKDGLESEAEKL----RDVYASGSIDKSPEKIGSIV----CKLVRNNVW 246
           +++   ++  ++K G   +  +L    R+VY+     KS   +  I+    C  V  NV+
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205

Query: 247 GEDVEQQLRDMSVSFSSDMVKMILENLC--TEPAKAFIFFRWIGESEMFKH----DEQTY 306
            + + +++     +F      ++++  C   E   A    R     +M KH    +   Y
Sbjct: 206 YDMLSRKIPPTLFTFG-----VVMKAFCAVNEIDSALSLLR-----DMTKHGCVPNSVIY 265

Query: 307 NAMARVLGREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMLEEAVNLYVFAMA 366
             +   L + + ++   ++++EM   G   + ETF  V+   CK   + EA  +    + 
Sbjct: 266 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 325

Query: 367 GGNKPSMDCLTFLLKKIAVSKHLDL--DLFSRTLK----IFS-------------ETGNV 426
            G  P      +L+  +     +D   DLF R  K    IF+             +   V
Sbjct: 326 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 385

Query: 427 LTDSMV-FAVLKSLSTV----------GRIGEYNEVLNIMKEYGYVFSGGMQRKVAFRLS 486
           L+D +  + ++  + T           G +G   EVL+ M+  G   +      +     
Sbjct: 386 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 445

Query: 487 KTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAGDLAKASDCIHKMVEKGGVPSAG 546
           K GK DEA + +N + A G  P+   +  LI   C    + +A +   +M  KG  P   
Sbjct: 446 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV- 505

Query: 547 YALDLIVNAYCQKKRETDASHLLFDLVDEKQLKPRHSTYKTLINKLLLRGEFKEALKLLG 565
           Y  + +++  C+      A  LL D++ E  +     TY TLIN  L RGE KEA KL+ 
Sbjct: 506 YTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVN 555

The following BLAST results are available for this feature:
BLAST of CaUC11G213410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890460.10.0e+0091.97pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Benin... [more]
KAG7016081.10.0e+0090.47Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6578521.10.0e+0090.32Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022992918.10.0e+0090.02pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucur... [more]
XP_023550224.10.0e+0090.32pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucur... [more]
BLAST of CaUC11G213410 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M8915.8e-18252.21Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... [more]
Q8LPF12.4e-18050.74Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
Q9STK52.3e-9034.03Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... [more]
Q9LFF11.9e-2022.26Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q9FMF61.6e-1923.65Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
BLAST of CaUC11G213410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JYT40.0e+0090.02pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc... [more]
A0A6J1FJW50.0e+0090.17pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc... [more]
A0A5A7TD410.0e+0087.73Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C9Q10.0e+0087.73pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc... [more]
A0A0A0KSL30.0e+0086.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643230 PE=4 SV=1[more]
BLAST of CaUC11G213410 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G02490.14.1e-18352.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15980.11.7e-18150.74Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G48250.11.7e-9134.03Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.11.4e-2122.26Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G64320.11.2e-2023.65Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 540..571
e-value: 7.0E-4
score: 17.6
coord: 291..321
e-value: 6.5E-5
score: 20.9
coord: 468..500
e-value: 4.2E-6
score: 24.6
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 461..492
e-value: 1.0E-5
score: 25.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 539..567
e-value: 0.0065
score: 16.6
coord: 291..319
e-value: 0.029
score: 14.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..499
score: 10.775016
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 288..322
score: 9.854266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 537..571
score: 9.437737
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 379..518
e-value: 7.7E-17
score: 63.2
coord: 240..378
e-value: 4.8E-15
score: 57.4
NoneNo IPR availablePANTHERPTHR47003:SF3BNAC09G41880D PROTEINcoord: 14..656
IPR044578Pentatricopeptide repeat-containing protein BIR6-likePANTHERPTHR47003OS01G0970900 PROTEINcoord: 14..656

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC11G213410.1CaUC11G213410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
molecular_function GO:0005515 protein binding