CaUC11G213300 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC11G213300
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionProtein TIC 214
LocationCiama_Chr11: 26458098 .. 26466163 (+)
RNA-Seq ExpressionCaUC11G213300
SyntenyCaUC11G213300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGGATACAGCAAAATAATTCTATTAGATCTAATGGACTTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTACTATTTAGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCTGTTTATGAAACTTCTTACCCTCCGGATGGAAATAAAGAAAATTCGAAGTTAGAAATAGATAAAAAAGAAAAATCTCTCTTCTGGTTTGAAAAACCTCTTGTGACTATTCTTTTCGACTATAAACGATGGAATCGTCCATTTCGATATATAAAAAATGAGAAATTTGAAAATGCTGTTAGAAATGAAATGTCACAATATTTTTTTTATACATGTCAAAGTGACGGAAAAGACAGAATAGTTTTTACACATCCACCTAGTGTAGCAACTTTTTTTGAAATGATACAAAAAAAGATATCTTTGTTCACAAGAGAAAAACTTTATTATGATGAATTCGATAATCCTTGGAATTATCTCAATGAACAAAAAAAAAGAAATTTAAACAAAAAATTGATAAATAGAATTCAAGTTCTCGATAAGGGATCCCTTACTCTAGCTCGGGATGTACTGGAAAAAAGGACTCAATTATGTAATGATAAAACTAAAAAATACTATTTACCAAAAACATATGATCCGTTGTTGAGCGGACCTTACCGCAGACGAATCCATTTTGTTTTTTCATTCTCAATGCTAAATGAAACTTCTCGAAAAAATGATAGTGAGAACGTTTGGACAAATAAGATTCATGCTATCTTTCTTAATACTAATTACCTACAAATTGAAGATAAAATTGAGTCAGAAGATCGAATAAAATCTTTAAACTTTTTATTCGATGCAGTTATAACTCCTTACAACGCTAAAGCAAGTCGTCAAAACTCGATTGGAATAAGAGAAATCAGTAAAAAAGTTCCTCGATGGTCATCCAAATTAATCGACGAGTTAGAACAAATGGAAGGAGAAAACGAAGAAAGTATGGCGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTTTACTGATAATCGAGAAACTAGCGATACTTATACTAATACCAAAGATACTAATAATCCTGCTGAAACAGACGAAGTTGCTTTGTTAAATTTAAATACTAATTTGTAGTTTAAAGGTTTTTTTGCTAAGAGGAAAAAAAAAGGCTCATGCATTACTAATATGCTTTTTGGTTAAAATACAAATTTAGCTCCTAAATTTTTAAGGATTTATTTATTTTGTCAACTTTAAAAAGTGTTTATATTCTAATAATTTCTTCAACTCTTAGATTTGTGTCTATTTGGACATTGAACTTTAAAAATTTTCTGATAAATTTTTCATCTTTTAACTTTATGTTTAGCAAATTTTTTCATTTTCAATTTCGAGTTGGCATTTAACATATTCAACGTTTTCTTTTTTGAATGCATGGACATACAATCACAAAGTTGAAAGTTTATGAGCCTATTAATTGAAAGTTATTAAACAAAATTTAAAACTTATAGGCCAAATAGACATTAACTTGTAATGTAACCATACGATGTGAATCCATTTATAACTTCTAAGTTTTACATCAACTAGTCGTTGATTATGATGTTAATACATTTCTTTTAAAAGAACGTCGCAATCTCTATTAAATTGTTAATCGTTAATCATTATATAATGTTGTTTTAATACATTTATCATTATATATTGTTGTTTTAATACATTTATCCCAAGTGACCTTATTTTAATTAAATTTGACACGAAAGAAAAGGAAACCAATGACATGGAATTTGATTTGATCTCTAAAGTTTTTAAATAAGAGATTAGCAAAGATGACGTGGGAGATTACTTATATGCCACGTGGGTTTCTTATGAAAGAACGTGTTGCTTCGGATAAAGTTTTATTTATTTATTTTATTTTCTTTTAAATTATTATTATTATTTCCCATAATGTAGATGTAGCTAACATCTATGTTTACTAGATGTGTGTTTCTTTGAAGAACAAGAAAACCAAACAATTACATAGATGAAGGGATTATTTCAAATAATAATGTTATTTAAAAAAAAAAATTCGAAAAATAGGATGGTTTAGAAACTAATGACAAAAATAGGATGGTTTGGAAAATAATTTGGAAATTGGGGTAGTGAAATCGTGTACCCGGTACACGATTTCAGTCAAAGTCTTACGTGGCGGTAGTAAGTCGTGGACCGGGTCCACGAGTTTGCCTCCACAAAGTTGCACTCATCTTGCTATAATCGCGGGGAACGAGCAGTTATTTCGGATAGTATTTATGGTTCGAGTTTTGATAAAAAAGACTTCTTACCCCCGTTCTTTTCCCATGAGCAGTTATTTCAGATAGTATTTATGGTTCGAGTTTTGATCAAAAAGACTTCTTACCCCGTTCTTTTCCCATGATACGTCCAAAATCGTCCGGTTTTTTTCACATGATAAATAAGTTAATTAGTTAATTACCCACTTAAATGAAAATTTGCTTATTACTTGTGTTCATCAATTATTGTATTAGTTTCATTGATTCTTAATTATTGAAAATGTAATGGAAAATCATTAATTCATTTAGTTGAAGATAAAAAGTTAATACAAATCAGGAAATCTAAAATACAAATCAAGTGCCACATGGTGGTCTTCTTCGCGCACGTTGTCCACGACGAGGCACAGGCACTTCAATTTGTTGTTGCTGGTGGATTACATCGTCGATATCCTGTTGGGTGACGCCAGATGGAAATTCATCATGTGCATAATATTCTTGTTGATGGCCAGAACTGGATGCAATGTCTGGTTGTAATATGTGAGGTTCCTGGTCATCGGGTTGCTTTGGAACACCTTCATCACGTTGTCTCTGTCGTCTACGACGAATACATTTTCGATCAGTGTCAGCAACATTGAGACATTCAGGGTTCAATTTCTTTAACTCTTTCATGTTTCGAATGAACTTACGTCTTTGGTGTTGATTTCCAGCCCTAAACACCAAATCTTTAAGTTGCTTTAATTTGTATTTCGAATTGAAATTACTCGCAACATGACGTAAACAATAACGATGATATGCTTTAGGTTCAGCCCAACCAATTTCCTCGTTGTTAATTGCTGCAATGATCCCTCTGTGTCTATCCGAAATTAAGCAAATCCCTTCTCGGTCAGTAACATACTCCCGCAATGCCCACAAAAACCATGACCAACTAGATGTATTTTTCCCTTCAACAATAGCAAATGCAAGAGGAAATATATGCCCATTCGAGTCAATAGACAAAGCAGTGAGCAATTTCCCTTTATACTTGCCGTAAATATGGGTTCCATCTATTTGAATTAAAGGCCTACAGTACTTAAATCCTTCAATTGCAAGACCGAATGCCCAAAAAACACGACCAAATATAGTTTTACCAGGCACATCAGAAGGGAGAAAATGCCAATCTACTCGTGTACCAGGATTGTAGTGCACAGCAGCACTCAACCAGTACGGAAGTTCTGAATACGATTTCTCCCAATCGCTGAAGACTGCAACCAAAGCTTTTTTCTTAGCTTACACACGTCTGTATTTGACATTATATCCGTACTGTTTTTTAAGTGCTTCTTGTAGTACCGCCACAGGCACACTAGGATCAGCTCTAACTAAATTTTGAATTTCATTGCTCATGAAATTAGAATCAAGTTGTGAATTATCTTGTGCCACTTCTGTGTATAAACAAGTATGGTTCTCTCCAAGTTTAGTAATTTCAAACATCCCATGGATTTTGCGTCGACAAGCACGCAACCTCCACCTACAACCTTCATCCCATTGCTTGCATCGCACATACCAAATATCCTGGTTCGATTCTACCACAGATATTTGGTAGTGTTCAGTCACACAATATTTTTTTACTGCCATTTGTAGGTCTTCTTTCGTATCAAATACCATTCCTTTTTGTATTATACTAGAGTTATCTAGACTTTTCCCCCTTTCCTCCAAGGTTGATCCTTGTTCACAGACTGAATCAGTAATTTCCCATTCTATCTGTGTAAATATCTCCGACTGAACCAACTCATTTTCATTTTCTATATTTCCTTCTTCTCCAAACAATTCATCAATTTTTACACCAATGTCACTATCCGCACAATTTCCAGCTTCAATAATAACTAAATCTTCTGGACGAAACGACATATTTAAATTCGTTTACAACTATAAAGGTTAAAAAGAAAAATTAGTTCAAATCTACCCAAAATTATAAACTCGTGGACCCGGTCCACGAGTTTACTACCCAATATAACTAATTTCCCACCACATTATTTACCAATAATTATTCCTACAACAATAAACGCCGAATAACATTCAACACTCAAACCTAAATTTTTTAAATTTATTCATGCATGCAAAACGTCTACATATACAAATTTATTCATTAATGCAAAACAAAACGTACATAACTATTGCATATTTATAAGATAATTAGAAAGGAAAATGTATATGCATACGTATATGGCGGCGGCAGCGGGGGCAGTAGGGCGGCGGCGGCAGCTAAACGACGGCAGTGGCGGCGACGGCGGCTAAACGAAAAGGGAATGATTTGAGAAGAAGAAGAGAAATGACAGCGACAATGACAAACGAGAAGTGAAATAAGAGAAAGGAGAGAAATGAGTAAGGAAATGAAGAGTGAACGGAGAGATATGAGGAGAAATGAAGACTGAAAATAGAGAAGTGAAGAAGAAGAAGTGAAGAAGAAGAAGCCGAAGAAGTGAGGAAGAAGGAGGGTGGCGTCGGGTTTAAAGAGAGGGAACTCGTGGACGGGGTCCACGATTACCGAAATCGTGGACCCGGTCCACGAGTTCGGTCAATGCATGCAGGCATGCAGGCTGACACCGTCAGCCGCATGCAGGGTGGACGCAGGGTAATCGTGTACCCGGTACACGATTTCCACTGAAATCGTGGACCGGGTCCACGATTTCACCACCCTAATTTTGGTATTTCTTTCCCCCCACCCTATTTTTAGAATTATTTTTTAAAAAAATATTATTTTAAAAAAAATTCTAGATGAAGAGACAAAATTTGGCTCTATTAAAAGACATAAGGCAACTAGAAAAAAATTTCCCACCACACATACAAATGAGACCCATCCTTTACTAAATGTGTTTGGTTTGGTTTGGTTTTAACATTTAATTTTTATGGGCCTCCAAACAAAATTTAATGCAATGGTGACGTGGCAGAAGACAACAAAATTTAAGGAATCACCAAACACAAAATAAATTAAAAGCCTTTCTTAGCAATTTTTTAATAATGAACTTTTTTTTTAAAAAAAAATTACAAATTTAGGGCAGTTTTCTAAATAATAATTAAAATAATGTTAAATAAATAAGAAATGAAAAAAATGGAGTGGAAAAGCCAACTATTGACAAATTTGGTGTACCCAAATCGCATACGTGGTACACGATTTCCTACTTTTTTTTTTTTTATTATTATTATTTTTTTTTCCTGCTTCTTCCTTCCTTCTTCTTCCTTCCTTCTTCGAAAAGCAATGAAACACCAAACCCTCACTTCCTCACAACCAAATCAGCTTTTTCTTCATATTCAGCCAAGGAAAAGAGTTTTTTAAAAAATAATAATAATAATAAAAAAAAAAAAAAAAAACAAACTCCACCATTTGAGGTCATGGAAGAAGTGTAGTCTGGGTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAACCAGACTACACTTCTTCCATAACCTCCAATGGTGAAACTCTTTTTGTTCAAAAATTCAAAATCGGTGACGATCTCAATCCAATTTGTTGAATGCTAATAGAAATTTCCTTTTTTCTTTAAAAGAAAAAAAAAAAAAAAAACCCAGACTACACTTCTTCCATAACCTCCAATGGTGAAACTCTTTTTGTTCAAAAATTCAAAATCGGTGACGATCTCAATCCAATTTGTTGAATGCTAATAGAAATTTCCTTTTTTCTTTAAAAGAAAAAAAAAAAAAAAAACCCAGACTACACTTCTTCCATAACCTCCAATGGTGAAACTCTTTTTGTTCAAAAATTCAAAATCGGTGACGATCTCAATCCAATTTGTTGAATGCTAATAGAAATTTCCTTTTTTCTTTAAAAGAAAAAAAAAAAAAAAAACCCAGACTACACTTCTTCCATAACCTCCAATGGTGAAACTCTTTTTGTTCAAAAATTCAAAATCGGTGACGATCTCAATCCAATTTGTTGAATGCTAATAGAAATTTCCTTTTTTCTTTAAAAGAAAAAAAAAAAAAAAAACAAACTCCACCATTTGAGGTCATGGAAGAAGTGTAGTCTTTTTGGTTTGGTGTACCCAAATCGCTTAGTTTAGTTTCTGTGAGAAGAATTTAGTTGGGGTAGTAGCTGAAAATAACATTTTTTTTTATTAAGGCTCTTTTGGAGGGAGAGCTTAACCCTCTTACATTCCATGTTAGGATCTTCATGTAAGACCGAACTACCCCAAATGTAAGTTATCTAAGTTCCCTCTTTTAGCTGCTTCTTTCTCGTTGATTTCAACTTCTCTAGCTTTGAGTTCCCTTGCTGGTGTCAATTTGAGATTGTTGTTTCTTAACCAAATGATGAGATCTTTTTTGAAGGCTTCTTCGGAGATCAATGCTTCTTCTTTTTCGAAATTCCTGTTGGCAAGCCTTTCCTTTAGAATGTCTGATTCAGTAGGAGATGAGATTATGTCGAAGAAAGTATGGATGTCTGGGTTTGAGACTAATGTGTCCGAGATCGGTGAAAGAGGGCCCAAGTCTACGGTCAGAGTTATCTCTTGTTCGCATTTGATCCGTCTATGATCAATTTTTCTGATTGGGTTGTAGTATTTACCATCTCCCGATTTGGGCTTTTGACCCAATATATCATCTTTCTTTCCTTCTTCTTCAGTTGGGCTTTGGCTTCTATTGGGCTTCTAATCTTTAGTGGGCGAGCTAGGGAAAAATCTTGATTATAATAATAAGTTGTATTTTGTGGAAAAGGGAAAATAACCTTTCTCTTTGCGATTTGACAGGTTCCACACTAGCATTCAATTTTGCTTCCCCTTTCTTTGGCTGTCAGGGCTTTCCTCTTCCCCAAAAGAATTATTCATTCCTTCTTATCATTGCTTCCATCACTGTCAGAATTTGAAAATTTCTTGGTGTCGCCTCCGTTCGTGTTTCTCATCTGAGTTTTGCATTGATCGGAGTTGGGTTGTTGCATCTTCAATGGAGGGACTGCTATATGTTTCCGATGAAATAGTAGTTTTCCATCTCATGATCAAATTCATCAAAATCCATGGCTGCCTCCTTGGTGAACGTACCATGAATGTTGGGGTTTTGTTTATGAGCCATCTTCCTACTGAAATTGCAACCAATTAG

mRNA sequence

ATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGATCTTCATGTAAGACCGAACTACCCCAAATGTAAGTTATCTAAGTTCCCTCTTTTAGCTGCTTCTTTCTCGTTGATTTCAACTTCTCTAGCTTTGAGTTCCCTTGCTGGTGTCAATTTGAGATTGTTGTTTCTTAACCAAATGATGAGATCTTTTTTGAAGGCTTCTTCGGAGATCAATGCTTCTTCTTTTTCGAAATTCCTGTTGGCAAGCCTTTCCTTTAGAATGTCTGATTCAGTAGGAGATGAGATTATGTCGAAGAAAGTATGGATGTCTGGGTTTGAGACTAATGTGTCCGAGATCGGTGAAAGAGGGCCCAAGTCTACGAATTTGAAAATTTCTTGGTGTCGCCTCCGTTCGTGTTTCTCATCTGAGTTTTGCATTGATCGGAGTTGGGTTGTTGCATCTTCAATGGAGGGACTGCTATATGTTTCCGATGAAATAGTAGTTTTCCATCTCATGATCAAATTCATCAAAATCCATGGCTGCCTCCTTGGTGAACGTACCATGAATGTTGGGGTTTTGTTTATGAGCCATCTTCCTACTGAAATTGCAACCAATTAG

Coding sequence (CDS)

ATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGATCTTCATGTAAGACCGAACTACCCCAAATGTAAGTTATCTAAGTTCCCTCTTTTAGCTGCTTCTTTCTCGTTGATTTCAACTTCTCTAGCTTTGAGTTCCCTTGCTGGTGTCAATTTGAGATTGTTGTTTCTTAACCAAATGATGAGATCTTTTTTGAAGGCTTCTTCGGAGATCAATGCTTCTTCTTTTTCGAAATTCCTGTTGGCAAGCCTTTCCTTTAGAATGTCTGATTCAGTAGGAGATGAGATTATGTCGAAGAAAGTATGGATGTCTGGGTTTGAGACTAATGTGTCCGAGATCGGTGAAAGAGGGCCCAAGTCTACGAATTTGAAAATTTCTTGGTGTCGCCTCCGTTCGTGTTTCTCATCTGAGTTTTGCATTGATCGGAGTTGGGTTGTTGCATCTTCAATGGAGGGACTGCTATATGTTTCCGATGAAATAGTAGTTTTCCATCTCATGATCAAATTCATCAAAATCCATGGCTGCCTCCTTGGTGAACGTACCATGAATGTTGGGGTTTTGTTTATGAGCCATCTTCCTACTGAAATTGCAACCAATTAG

Protein sequence

MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDETEEIRDLHVRPNYPKCKLSKFPLLAASFSLISTSLALSSLAGVNLRLLFLNQMMRSFLKASSEINASSFSKFLLASLSFRMSDSVGDEIMSKKVWMSGFETNVSEIGERGPKSTNLKISWCRLRSCFSSEFCIDRSWVVASSMEGLLYVSDEIVVFHLMIKFIKIHGCLLGERTMNVGVLFMSHLPTEIATN
Homology
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BLAST of CaUC11G213300 vs. NCBI nr
Match: BBN69961.1 (hypothetical protein Prudu_1292S000200 [Prunus dulcis] >BBN70000.1 hypothetical protein Prudu_1327S000100 [Prunus dulcis])

HSP 1 Score: 159.1 bits (401), Expect = 6.0e-35
Identity = 97/125 (77.60%), Postives = 98/125 (78.40%), Query Frame = 0 

Query: 2   EEGTEKKVSATTGFITGQLMMFISIYYAPLHLA----------------LGRIPSPIVTK 61
           EEGTEKKVSATTGFITGQLMMFISIYY PLHLA                LGRIPSPIVTK
Sbjct: 48  EEGTEKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVLALPVYYLGRIPSPIVTK 107

Query: 62  KLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDE 111
           KLKETSET       EETDVEIETTSETKGTKQEQEG TEED SPSLFSEEKEDP KIDE
Sbjct: 108 KLKETSET-------EETDVEIETTSETKGTKQEQEGSTEEDPSPSLFSEEKEDPYKIDE 165

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BLAST of CaUC11G213300 vs. NCBI nr
Match: PHT49966.1 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Capsicum baccatum])

HSP 1 Score: 148.7 bits (374), Expect = 8.1e-32
Identity = 96/134 (71.64%), Postives = 98/134 (73.13%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRIPSPIVT------KKLKETSETE 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRIPSPI+T      KKLKE S+TE
Sbjct: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRIPSPILTKKLKEAKKLKEASKTE 60

Query: 61  ERGESEEETDVEIETTSETKGTKQEQEGFTEED------------------TSPSLFSEE 111
           ER ESEEE DV  ET SE KGTKQEQEG TEED                   SPS FSEE
Sbjct: 61  EREESEEERDV--ETASEMKGTKQEQEGSTEEDPYPSPSLFQEGSTEEDPYPSPSPFSEE 120

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BLAST of CaUC11G213300 vs. NCBI nr
Match: QZL38742.1 (Ycf1 protein [Citrullus ecirrhosus])

HSP 1 Score: 139.4 bits (350), Expect = 4.9e-29
Identity = 110/260 (42.31%), Postives = 110/260 (42.31%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTS 169

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BLAST of CaUC11G213300 vs. NCBI nr
Match: YP_009431615.1 (Ycf1 [Citrullus amarus] >APW82521.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >ASY96227.1 Ycf1 [Citrullus amarus])

HSP 1 Score: 139.4 bits (350), Expect = 4.9e-29
Identity = 110/260 (42.31%), Postives = 110/260 (42.31%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTS 169

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BLAST of CaUC11G213300 vs. NCBI nr
Match: YP_009326048.1 (Ycf1 [Citrullus lanatus] >YP_009348090.1 Ycf1 [Citrullus mucosospermus] >APW82946.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >APD52540.1 Ycf1 [Citrullus lanatus] >APW82776.1 Ycf1 [Citrullus mucosospermus] >APW82861.1 Ycf1 [Citrullus mucosospermus] >APW83031.1 Ycf1 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 139.4 bits (350), Expect = 4.9e-29
Identity = 110/260 (42.31%), Postives = 110/260 (42.31%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTS 169

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BLAST of CaUC11G213300 vs. ExPASy Swiss-Prot
Match: Q0ZIW0 (Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-27
Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 0 

Query: 20  LMMFIS-IYYAPLHLALGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQ 79
           +++FI+ +YY      LGRIPSPI+TKK+KETSETEERGESEEETDVEIE TSETKGTKQ
Sbjct: 227 ILLFITCVYY------LGRIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQ 286

Query: 80  EQEGFTEEDTSPSLFSEEKEDPDKIDETEEIR 111
           EQE  TEED SPSLFSEEKEDPDKIDETEEIR
Sbjct: 287 EQERSTEEDPSPSLFSEEKEDPDKIDETEEIR 312

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BLAST of CaUC11G213300 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 102/260 (39.23%), Postives = 105/260 (40.38%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTS 169

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BLAST of CaUC11G213300 vs. ExPASy Swiss-Prot
Match: Q06GT8 (Protein TIC 214 OS=Drimys granadensis OX=224735 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 74/91 (81.32%), Postives = 77/91 (84.62%), Query Frame = 0 

Query: 20  LMMFISIYYAPLHLALGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQE 79
           L+  I +YY      LGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQE
Sbjct: 225 LLFIICVYY------LGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQE 284

Query: 80  QEGFTEEDTSPSLFSEEKEDPDKIDETEEIR 111
           QEG TEED  PS  SEEKEDPDK+DETEEIR
Sbjct: 285 QEGSTEED--PSFCSEEKEDPDKLDETEEIR 307

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BLAST of CaUC11G213300 vs. ExPASy Swiss-Prot
Match: Q4VZL0 (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-25
Identity = 100/260 (38.46%), Postives = 102/260 (39.23%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPYTITVLALPYLLFHFFWTNPKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFYYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTS 169

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BLAST of CaUC11G213300 vs. ExPASy Swiss-Prot
Match: A6MMG9 (Protein TIC 214 OS=Chloranthus spicatus OX=13006 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25
Identity = 101/260 (38.85%), Postives = 105/260 (40.38%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEK+VSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKEVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLVLPYLLFHFFWKNHKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARLVNIYMFRCNNKMLFVTS 169

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BLAST of CaUC11G213300 vs. ExPASy TrEMBL
Match: A0A6N2MYE5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS430111 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 100/119 (84.03%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 2   EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGR----------IPSPIVTKKLKETS 61
           EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGR          IPSPI TKKLKETS
Sbjct: 18  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPIPSPIFTKKLKETS 77

Query: 62  ETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDETEEIR 111
           ETEER   EEETDVEIETT ETKGTKQEQEG TEED S SLFSEEKE+PDKIDETEEIR
Sbjct: 78  ETEER---EEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKENPDKIDETEEIR 133

[Close]
BLAST of CaUC11G213300 vs. ExPASy TrEMBL
Match: A0A5H2Y3H5 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_1292S000200 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-35
Identity = 97/125 (77.60%), Postives = 98/125 (78.40%), Query Frame = 0 

Query: 2   EEGTEKKVSATTGFITGQLMMFISIYYAPLHLA----------------LGRIPSPIVTK 61
           EEGTEKKVSATTGFITGQLMMFISIYY PLHLA                LGRIPSPIVTK
Sbjct: 48  EEGTEKKVSATTGFITGQLMMFISIYYVPLHLALGRPHTITVLALPVYYLGRIPSPIVTK 107

Query: 62  KLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDE 111
           KLKETSET       EETDVEIETTSETKGTKQEQEG TEED SPSLFSEEKEDP KIDE
Sbjct: 108 KLKETSET-------EETDVEIETTSETKGTKQEQEGSTEEDPSPSLFSEEKEDPYKIDE 165

[Close]
BLAST of CaUC11G213300 vs. ExPASy TrEMBL
Match: A0A2G2WXH8 (Protein TIC 214 OS=Capsicum baccatum OX=33114 GN=CQW23_09713 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.9e-32
Identity = 96/134 (71.64%), Postives = 98/134 (73.13%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRIPSPIVT------KKLKETSETE 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRIPSPI+T      KKLKE S+TE
Sbjct: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRIPSPILTKKLKEAKKLKEASKTE 60

Query: 61  ERGESEEETDVEIETTSETKGTKQEQEGFTEED------------------TSPSLFSEE 111
           ER ESEEE DV  ET SE KGTKQEQEG TEED                   SPS FSEE
Sbjct: 61  EREESEEERDV--ETASEMKGTKQEQEGSTEEDPYPSPSLFQEGSTEEDPYPSPSPFSEE 120

[Close]
BLAST of CaUC11G213300 vs. ExPASy TrEMBL
Match: A0A1P8LE53 (Ycf1 OS=Citrullus mucosospermus OX=519315 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.4e-29
Identity = 110/260 (42.31%), Postives = 110/260 (42.31%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTS 169

[Close]
BLAST of CaUC11G213300 vs. ExPASy TrEMBL
Match: A0A1P8LFC3 (Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.4e-29
Identity = 110/260 (42.31%), Postives = 110/260 (42.31%), Query Frame = 0 

Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA-------------------------- 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLA                          
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKH 109

Query: 61  ------------------------------------------------------------ 111
                                                                       
Sbjct: 110 FFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTS 169

[Close]
BLAST of CaUC11G213300 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-13
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGR 38
          EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGR
Sbjct: 54 EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGR 89

[Close]
BLAST of CaUC11G213300 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-13
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGR 38
          EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGR
Sbjct: 55 EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGR 90


HSP 2 Score: 62.4 bits (150), Expect = 7.1e-10
Identity = 52/111 (46.85%), Postives = 59/111 (53.15%), Query Frame = 0 

Query: 20  LMMFIS-IYYAPLHLALGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQ 79
           +++FI+ +YY      LGRIPSPI TKKLK                     TSET GTKQ
Sbjct: 230 ILLFITCVYY------LGRIPSPIFTKKLK--------------------GTSETGGTKQ 289

Query: 80  EQEGFTEEDTSPSLFSEEKEDPDKIDETEEIR-----------DLHVRPNY 119
           +QE  TEE   PSLFSEE ED DKIDE EEIR           + HVR  Y
Sbjct: 290 DQEVSTEEAPFPSLFSEEGEDLDKIDEMEEIRVNGKDKINKDDEFHVRTYY 314

[Close]
BLAST of CaUC11G213300 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-13
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGR 38
          EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGR
Sbjct: 55 EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGR 90


HSP 2 Score: 62.4 bits (150), Expect = 7.1e-10
Identity = 52/111 (46.85%), Postives = 59/111 (53.15%), Query Frame = 0 

Query: 20  LMMFIS-IYYAPLHLALGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQ 79
           +++FI+ +YY      LGRIPSPI TKKLK                     TSET GTKQ
Sbjct: 230 ILLFITCVYY------LGRIPSPIFTKKLK--------------------GTSETGGTKQ 289

Query: 80  EQEGFTEEDTSPSLFSEEKEDPDKIDETEEIR-----------DLHVRPNY 119
           +QE  TEE   PSLFSEE ED DKIDE EEIR           + HVR  Y
Sbjct: 290 DQEVSTEEAPFPSLFSEEGEDLDKIDEMEEIRVNGKDKINKDDEFHVRTYY 314

[Close]
BLAST of CaUC11G213300 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-13
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGR 38
          EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGR
Sbjct: 54 EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGR 89

The following BLAST results are available for this feature:
BLAST of CaUC11G213300 vs. NCBI nr
Match NameE-valueIdentityDescription
BBN69961.16.0e-3577.60hypothetical protein Prudu_1292S000200 [Prunus dulcis] >BBN70000.1 hypothetical ... [more]
PHT49966.18.1e-3271.64NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Capsicum baccatum][more]
QZL38742.14.9e-2942.31Ycf1 protein [Citrullus ecirrhosus][more]
YP_009431615.14.9e-2942.31Ycf1 [Citrullus amarus] >APW82521.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >AS... [more]
YP_009326048.14.9e-2942.31Ycf1 [Citrullus lanatus] >YP_009348090.1 Ycf1 [Citrullus mucosospermus] >APW8294... [more]
BLAST of CaUC11G213300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0ZIW02.8e-2780.43Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1[more]
A6MM951.4e-2639.23Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1[more]
Q06GT81.4e-2681.32Protein TIC 214 OS=Drimys granadensis OX=224735 GN=TIC214 PE=3 SV=1[more]
Q4VZL03.4e-2538.46Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2[more]
A6MMG94.5e-2538.85Protein TIC 214 OS=Chloranthus spicatus OX=13006 GN=TIC214 PE=3 SV=1[more]
BLAST of CaUC11G213300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6N2MYE51.8e-3784.03Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS430111 PE=4 SV=... [more]
A0A5H2Y3H52.9e-3577.60Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_1292S000200 PE=4 SV=1[more]
A0A2G2WXH83.9e-3271.64Protein TIC 214 OS=Capsicum baccatum OX=33114 GN=CQW23_09713 PE=3 SV=1[more]
A0A1P8LE532.4e-2942.31Ycf1 OS=Citrullus mucosospermus OX=519315 GN=ycf1 PE=4 SV=1[more]
A0A1P8LFC32.4e-2942.31Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1[more]
BLAST of CaUC11G213300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G07739.15.3e-1397.22Ycf1 protein [more]
ATCG01130.15.3e-1397.22Ycf1 protein [more]
ATCG01000.15.3e-1397.22Ycf1 protein [more]
ATMG00370.15.3e-1397.22Ycf1 protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008896Protein TIC214PFAMPF05758Ycf1coord: 35..110
e-value: 1.6E-28
score: 99.1
coord: 2..37
e-value: 1.8E-19
score: 69.2
IPR008896Protein TIC214PANTHERPTHR33163PROTEIN TIC 214-RELATEDcoord: 35..110
coord: 2..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..104
NoneNo IPR availablePANTHERPTHR33163:SF13PROTEIN TIC 214-RELATEDcoord: 2..37
NoneNo IPR availablePANTHERPTHR33163:SF13PROTEIN TIC 214-RELATEDcoord: 35..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC11G213300.1CaUC11G213300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009528 plastid inner membrane
molecular_function GO:0005488 binding