CaUC11G210950 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G210950
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	UPF0400 protein C337.03-like
Location	Ciama_Chr11: 23164317 .. 23175010 (+)
RNA-Seq Expression	CaUC11G210950
Synteny	CaUC11G210950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGAGAGAAGACCTGGCGCGCCCAAGTAGCGGCGGCAAATCCCGACCCGATTCACAATCGCAAAGCCAAAATCAGTTCCGTTCCATTCCATTCCACTACCACACTTTCCACCAGTTCCCACACCCACACCCACACCCACACCCACACCCACACCCGTGCGGCCCAAACTGTAGCGACGTCGTGTCCAGCCAAAAATACTCCTTAACCACACCGCTATTCTAAAAACCCACCCATCTTATCTAGCCAGGCCACTCCCTGATTCCAAAATCCCCGCTTCCCCTTTCTGGGCTTTCATCTTCTTCTTCACACACTCCCCCACTTCCCCTTTTTCCCTTCTATTCCCCCTTTGCTCTCTGTTTTCGTAAACCCTTTTACCGTTTCCTGTAATTCCCCTCTTTTCTTCCATGGAGAAAGGCCTCCAACGGCCTAATTTTGCCCCCTTTTAGCTGCCTTCTCTCTAACCCACATTCCCTTTTCCAGGTACCTTCTGTTTCTTCTTCTACCTTGTCTATGTTCTTCAGCTCTGGAATTGTAGTTCTATGGGGGATGTAATTTATCTCGTGATCCTTCTTACTTTGTTGCTTTCCACTTTCGTGTATTTTGCTGTTTTTCTTTTTCTTTTAGCCATCTACCTTCGTGTGCTTTGTTTTATTTTTTTAGCTTATTTGCATTTGTTTTCTGCTTTTCTTCTTGATGAGTGAAGGGCAGTTTCGAAAAGTAGATCTTGACTTGCGGCCACATTCTTAGTTTTTTGATGTCTGAATTTTCTGTTTTGTATAGGAGGGAAGAATGATTATTTATTTTTTTGATTTCTGCTTAGAATTGGCTGGAATTAGTTCAACTACAGTGGATTAAAATATGCATTCTAAAGTTAAGTCATTTATGGTCAGGAGCTTGTTTAAAGTTTGAGGAAAACTTATTATTTACACTTTGGTATTGAGTCAGTCATTGAAATTGACTCTGAACTTGCATAAGATATTCTCCTAAAAGCCAAAGTTTAGATACCACACATAACTAGCTCTTACCTTCCCTCAACTTTCTTTTGCATTTTTTTTTTTGGAATTGGTGCTTTGTTTCTTTTTAGAAAAAGGTGCCACTGGCACTGTGCACGTATGGGATCTTGTTATAAAGAATCCAGAAAGTTATCTTACATCAACAACTCTGTTTTTAATAACCAAAATTGTAAGTTGCACCAAATAGCTTCAATCTTTCCATCCCCTCTCTTCTACTATCTACATCTTCTCTTGGAGTACACCGTTCTTTTTAGGAAAAAGGTGCGCTAAGCATTCTTGGGATATTGTTACAAAGAATCCATTAATTTATCTTGCTTACACTAATGACTTTATTTTTAACAACTAAAACTATAAGTTGCACCAAAAATGTCCGAGTTGTGTCCTCCAAATTTTAAATATACCAAGTTTAGTAGTTGCATATCAGATTATCAGTCAATATCACATTTGAGGTGGTGTTTAATGTTTTAGTAATATGTTGAGATCACACATCCACTTTATTTATTTTATAAGAGAAAGATTTTTGTTGAGAGGGGAAAGAACAAGCAACTGCTGCTACAAAATACTGAAGCTAAGAGAACATGCATATATTATGTACTTCATTTATTCCTTTTTCTTTGAACATTTTGTCCTTACACAGATTGGCCTGTATATTCTACATTATTTCTGCGAAAAGGATATCCAAATCGATGGGTGGTACGTTCAATCCACAAATTTTGGTAGAGAAGCTAGCCAGGCTGAACAACTCACAGGCGAGCATTGAGAGTATCCTCTTTGAAATTTATACTCTGTTTGGTCCAAGTTATTATTATCAATATTTTTTTTTTATTATTCTCTTCTTTTGGTTAAATTACTTTCATGGATATTTATTGCTTTAATTCTCTTGTTTTGTTGACGGACTTCTGTATTAAGTTCTTACAGGTGTTTTTCACCCATTATTTCTTTGGCAGTATTATTGTGGTGAAGTTGGCGCAACAATGGACTTGTTTAATGTTGTTGTGTCTTTGTGTAACCCAGTGAATCTGTAATTAATTACGTTCACTGCTACACATTTGGAAATTGATTAGGTTCCATTAGGTTATTAGTTAGGCTACCTTATGTAATCTTATGTTTTGGGAGAAGTTCTACTTCTCTTCATCATTGGCATCTTTGTTTAACTGTCCTAGTGATGTTCCTTTGCATTTGCTTTTACAAGATGCGGTTTGGATGTATGCTCTCAGTTTTTCTTTTAGGACTTATTATCGGTTTTTTCTTTTCTTTCTCTGAGTTCCATCTTCTTTTCTATGTCTGTGTATGTATATTATATGGTATAATGGTATAGTACTGTGGACCTGTCGTACTGCCATACTTGTACCTAATAGTCCGTTTCTGGCTTGCTTCTATGACACTGTAAAATGTAAATATATGAAATGAGAAGATGATAATAAGGTTATTGGTACTAGCCACTAGGTGAGGCATTGAAAGTGCATTAGAGAGTGCCTAATTCCTTGGCGTGTGCCTTATTACTTTCTGTTTGGTTTCTTAGTTCCATCCTTAATGTGATTAAGCTTTATCCCACTGGTGTATATTTCACATGAACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCACGTGAGCAGAGGTTGGCCTATCTGTACCTTGCAAATGACATTTTGCAGAACAGTAGGCGAAAAGGCTCAGAGTTTGTTGGTGAATTTTGGAAAGTCCTTCCTCATGCACTGCGTGATGTAATTGGGAGCGGGGACGAATTTGGAAGAAATGCTGCCCTACGACTGGTACATCAATGCTTACTTTGTATCCTCATCCTTTATCAATTTTTTTTACTTGTGCATAAACTTTCTTGTATATTTTTGTCCTTAGGCAAAAATCTAATTGGATACTTGGCATTCAAGTCTCTTGTACTATCTAGAATCCCAACGTGCATTTAAAGATGCTTATTGTTAACACTGTTTCGTAGATGCTTAGATATGAAATTAAGGGCATTCCATCTTTTATTTTCTCCCCCAGGCATCCGGCTAAGTTCCAGTGTTGCAATTTTTGTTGTTCTTGTAAAATCAAATTCTTAAGGGAAAACGAATGTTAAATCCTGTGTTAAAAAAGAATAGATGTTTTGTCTTCATGGATTTAATCCATTCCATACAACCATTATGAGTTGGCAACTTCCGAGGATAAACATCTAACAAGTTTTTCCAATGTGAATTATATTGTAGGGTCAAGGTGGGTTGTATTGCATGCCATATAATGTTTCACTATGCCAAGTTCAATAGCTTACATGCTTAAAGAAGTTAAGACTCAGAAAGTGTTATGAACCAAAATTCCAATTCATGGGAGTACGTAGGATTGTCCAAGAACAAGAAAATATTAGTATAAATAATAAAACCTAGAACCTCTCCTTGAGCTGAGAGAAACTGAATATAAAAGCACCACAAAATAGTCTATCTCATGTCAATGACTTCGTCCCTTTTTTATGATGTTCGCCATTAACTATTTTTTTTGGGTCTATTAGATAAAGATTCTTTGTGACCTTTCTTTGATATATATATATGTGTGTTTGTATATTTTANGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGAAGAAGTAGAACTGTAGAAGTAGAAGAAATAAAAAAAGAGAAGAAATTGTGAAGTTTTCTTTTAGCCATTTCCAACATCATCAGCCAATCTCTCCATCTCTCTGAAAATCCTATTCCTCTTGATCCAAATACCTGACAAAACGACAATGATGACAACAAATATTGATTCTCTCCTTCATCACCCTTTCAAGGAGGCCAAATTTTGTGGCTCAACTTTATTATTACTTTGGTGTTGTGGGTTGAGGGAAACCATAGAATTTTTAAGGCAAGGATTTGGTGTAAGCTTTGTAATTCCTTTATAACTCAATTTCTGATACTTTGTCTAACTTTACCTTCTTGTGACTTAGGCTAGAGGCTTCCCCCACTTCTGTAAATTTATTCTTCTTCATTTGTAGCTAACTTGTACTCAATTTACTGCCCTCTTCCATTTAATCCGTTGGCCATTAATTGTTCCTTCCAACAAAAGTAGCATACTCAATCCGAACTTTCCCATAATGTATTATAGTTCCTTTACTAATTAAACTCCGATCTGTAACATAGTACTATTGGATTTGGATCTTCAACCTGGGAATAAGTTGTTGTAAATGAAGATCAAATCTTAACAATTTTTCCCTGCATTCTTTTGTATTTAATGATTCTTGATAGGTTGAAGTGGAAAGGTTTTCTATTGTTTTTCTGGACTCTGTTATCATGTGTTTTATTTATATACCTATTTTAATTTTACTCATAGATTGGCATTTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGACAGAGTCTTAAAGAAGAGATAATGGGAAAGCATATGGAAACTGGTAATCGAAATGGGAAGCCATTCAGCAGTAAACTGGTAAGATATTATTGCTCTTTTATCATCTCCGAGTTATGTTCAAGACTAGTCTGACCATTAAATCACCTATTCTCATTTTTTTTTTCAACAGAAACAATCTGCCAGTGTATCGTTGGATAAAATAGTTTCTGGTTACCAAGTTGTTTATGGAAATGAGATTGATGAAGATGCAGTATTGAGCAAATGCAGGAATTCTATTAGCTATCTCGAGAAACTGGACAAAGAAATTGGCGCTGATGTCAATTCAGGTATTTATACATTGTTGATGGGTTTGCTATTATTTTTGCTGCATAGTGAGAATTATATCAGCTCTCTCCTGTGTAAAATTCTTAAGATTGGGGAACAGTTCGTTTTTGAATAGGGAAACTAATTAACTGTCGGTGCGATGTTTTTTTTGTTCCCTCCACCTCCACTGACGACTTCAGAGACCACCAATAAAAGGGTTGTTGTTGTTGGGTTTTTTTATAATAATTATTATAATAATAATAATTATTTTAATTTTTTTAATCGATCAATCAATCAATTGTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTATATATGAATTTTTAGTTTTTGAGAAACCGAACATGTGAATCATTGGAAAAAGGTGTTTGTTTTTTGTTTCAGCACTTTGTTTGGTTGGTTGGGTTGAAAGAAACAATTGCATCTTGGAAAGATAAAGCAGAGTTGGAAGTGCTAAGTATTTTGGGATAAATATTACCTTTTGTTTTTGTGGTCTATAGATGTAAAGTATTTTTCTTAATTTTTTTGGAGTACAACAATTGTGGGGTGGGGGATTGAACATTCAACCTCTAGGGATGGAGCGCATGCATAACCACTAAGCCAAGCTCATTTTGGCTATATATGTAAAGTTTGGCATCCTTGCATTCTAGATGGTAAAAATATACATACATACATACATATATATGTATATATGTATGTATTAATTTTGCTCTTTCATCTTCTTCAGAAAAGGATTTTTCGTCCCTTCTCGTATGACGGATACCTTTACTTTTCTATAACCAACATATCACGTGGTTGCTATCTGAAAGAAATACCTCTGATTGTAGATTTAGATTTAAGAAGAACAAAGTAATTTGGTGATATTATTAAACTTATTTATTTACTTTTTAACTACCTTTTTTCTTTTTAATAACATTCTTTGGGTTGTATACTAGGCTATTACTCATCTCCCATTGGTAACTTACATAACTTGACCTAAAATTTATCCTTTTTTATAATCAGCCCTGAAATTTAACCTGACCTTAAAAATTCACGAAGACAAATAAATTAGAGCATAATACATTCTTGGTCCCTGATGTATGAGGTTGATGTCTATTTGGTCCTTGAGGTTTCAAAAAATGAATGCTCTAGTCCTTGAGATTTCAAAACTAGTTCTAAATGGTTAATTAATTTGATTGCTAGTTGACTAACAAAAAAGTGACTTGGTGTTGTGAGGCAACAAAATTTAAATGAGTTGACAATTTTTACTAGTTTTATATTATTCTTTATGGATTAAATGAATTTTTCTTCCTTCTCCTTTCTCTCCTTTATCCTTCTGCTGGTGGTCTGCCCCAGTTCATCAGTTTCATTGAGCTTGTCATCCCTCTTCATTCCTCCCCTTTCTCAATCTCCTCCACCTTATAGATTAAAAAATGCATCATAATTTCAAAGCCAATTCCAAGAATCCCACTTCCAAAACCACTCAGAACTGTGATGAACCTCTAGCACTCTTAAAGCCCCCAAAATCCCACCCATGAAGCTAGACCACTCACCAATCTCCTAATTCCTCCTTGCTCTTTGTTTCCTCCATTATTTCGTTTGTCTTCTATGAAAAATTGTTGGGTGGGGGCTATGGCTCAGTTCACGTCCTCCCTCTCATTGGGGTTCTGTCACTCTTTATCTAATAGGGAACCACTAGACATTATTGATCTTCTATCGATGCTCTAAGAGTTTCATGGTTTCCTAAAGAAAAGGATATTTGTATTTGGAACCTTAGTCCATAGGAAGGGTTCTCTTGTAACCCTAGTCCTTTGAGGTGTGTGCTATTGTTGGGGGGTTTTGGAGAGAGAAGCAATAGGATTTGAGAGACCTCCGTGCGAGGCTTGGTCTTGTATTCAGTTCAACATGTCTCTGTGGGTGTTTGTAACTAAGTTTTTTGCAATTATTTGGCTGGTCTTATATTGCTAGACTAGAGATCTTTTCTTGTAAGTTGCCTCTGTTTTGTGGGCTCTCTTTCTGTATGGCTTAATTCTTTCATCTCTTTTTCTTTACACAAAAGTTCGGTTATTCATCTAAGAAAACAACAAGCTTATAACCGCTTTGGGCTTCAATGTTTGTCCGTCGAACACCTCTCTTCCAACATAGTCTATTGCAATTGCTGTTGCATGTCTTCTTCCAACTCAACATCCCTTCAATCCCAACGATTCAACAATCCTTTTCTCGCTATAGCTGAATTGACTTCCTCCTCCATTACTGCCTTCATCGACAATTTTGAGTATGATCTCAAATCAATTTCTAGTGTTGGCACTTCCCCCAAATTGATTCCACCAACCCTAGAAAGCGATTTATGAAATTTGATTCAATTTGCTTCTTGTTACTACATCTTCTTTGTTGCCCTCCTCGAAGCTATCACTCTCAGCAGTTTTGGTAGTTTCTGCTAATACCAATATCCGTCTTGCCACAATCTCCTTGCCTATGTAAATGTTGTCAATACCAACCTCCTCAACCTCTCCATTAGGGAAGATGAAGTGAAAAGATGAAGGGTGGGGAGAAGAAAAAGAGGAGAGAAAAGGAAAAGAGTCTGTAATCCATAAAAATAATATAGAATTAGTAAAAATTGTCAGCTCATTCAAAATTTCTCACCTCAACATACCATGCCACTTTTCTGTTAGTTAACTAACGGTCAATTTAAACAAGGGAGCATTTAGAAGTTAGAACGATTTTCCAGACCTCAAGAACTAAATGTCTTATTTTGAAACTCATGGACCAAATAAAGAAACTTCTAACCTCATGGACCAAAAGTGTATTTTGTCCAAGAAATTAGGTGTGGAGGTCCATGCTACTTATTGATACAAGCACTTCTAACTTTTCATGTAAATTGATGTGTCTTTTCCATTTTGAAGTATCAACTTTTTAGTATGTATACATATATATTTTTTTTCCCTAAAAAACATATCCTAGCGTGTCCATCAGTCCATGTCCTACATTTCTAGAAACAGATTTGTTGCTGTGTTGTTTCCATGCTGGTTCTTCTTAGCTTGTTTTGTTTTAGTTAAACTTTAAGATTGTTTGCTTTCTGTTGTTATTCTTCCTCTTTAACTACACAGGGCAATACCGTGGGTCTTCAATTGCAGATGATTTGCGGGGACATCATACCATTTTAAGGGACTGCATCGAACAATTAACAACAATTGAAACATCTAGGGCAAGCCTCGTGTCTCATCTGAGAGAGGCTCTTCAAGAACAGGTATTTTGGCATCACTTTGGAGAAAAATTAATGATGTGGTTATTCAAAGTAAATCTGATTTTTCTTTTCATTAAAATAAAAATTTTATTTTCAGGAATTCAAATTGGAGCAAGTCCGAAATCAACTTCAGGTTTGCGTTTCTGCTTCACATTGTCTTGGAGTATGGGGTCAATGATTCTTCTTTATTTTTCTAATTACTTGGTTTAGATCAACGCTATATGAAAACTCCATTGGTTTTGTGGGATTGGTTCAATTTTTTAAATGAAAGATGAAACGAACCTTCCTAGCCTCAAGTTGAAATTCATGCTTAGTCATTCTTTTCCATTTTTTTTCTTTTTATAAGAAACATTTTATTGATGAATGAAATAATCCAAAGAGTACAATAAGGAGACACATCAAAAATACAGATGAAGCCCAAACGAGAGAGAAGATAACACCAAAATAAAAGATGTACAGCCAAAAAAGAAAGATAGAAACAATAAAGCGGAGGATCTCCAAACAAAAGTGGCAAGAAGATGCAAAAGATAGTCAATAAAACAGATCCAAATAGCCCCTTTAAAAAACAAACAATGTGAAGAAAATTTTGCAGAATCAAGTTGATGGCGGTCCTTCTCCAATCAATTCTTTTGCTTTCCTGTCATATGATATAGAGCTTTCAAGATTCCGAAGTTCCCTCAACCCTCTTTTTTTCTTGGTAGATAGTTTGTTGGGTGCTTACGAGTTGGAATTGCCTTTATGCAAAGACCAAGTTCTTTAA

mRNA sequence

CGCGAGAGAAGACCTGGCGCGCCCAAGTAGCGGCGGCAAATCCCGACCCGATTCACAATCGCAAAGCCAAAATCAGTTCCGTTCCATTCCATTCCACTACCACACTTTCCACCAGTTCCCACACCCACACCCACACCCACACCCACACCCACACCCGTGCGGCCCAAACTGTAGCGACGTCGTGTCCAGCCAAAAATACTCCTTAACCACACCGCTATTCTAAAAACCCACCCATCTTATCTAGCCAGGCCACTCCCTGATTCCAAAATCCCCGCTTCCCCTTTCTGGGCTTTCATCTTCTTCTTCACACACTCCCCCACTTCCCCTTTTTCCCTTCTATTCCCCCTTTGCTCTCTGTTTTCGTAAACCCTTTTACCGTTTCCTGTAATTCCCCTCTTTTCTTCCATGGAGAAAGGCCTCCAACGGCCTAATTTTGCCCCCTTTTAGCTGCCTTCTCTCTAACCCACATTCCCTTTTCCAGATTGGCCTGTATATTCTACATTATTTCTGCGAAAAGGATATCCAAATCGATGGGTGGTACGTTCAATCCACAAATTTTGGTAGAGAAGCTAGCCAGGCTGAACAACTCACAGGCGAGCATTGAGACTTTATCCCACTGGTGTATATTTCACATGAACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCACGTGAGCAGAGGTTGGCCTATCTGTACCTTGCAAATGACATTTTGCAGAACAGTAGGCGAAAAGGCTCAGAGTTTGTTGGTGAATTTTGGAAAGTCCTTCCTCATGCACTGCGTGATGTAATTGGGAGCGGGGACGAATTTGGAAGAAATGCTGCCCTACGACTGATTGGCATTTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGACAGAGTCTTAAAGAAGAGATAATGGGAAAGCATATGGAAACTGGTAATCGAAATGGGAAGCCATTCAGCAGTAAACTGAAACAATCTGCCAGTGTATCGTTGGATAAAATAGTTTCTGGTTACCAAGTTGTTTATGGAAATGAGATTGATGAAGATGCAGTATTGAGCAAATGCAGGAATTCTATTAGCTATCTCGAGAAACTGGACAAAGAAATTGGCGCTGATGTCAATTCAGGTATTTATACATTGTTGATGGGGCAATACCGTGGGTCTTCAATTGCAGATGATTTGCGGGGACATCATACCATTTTAAGGGACTGCATCGAACAATTAACAACAATTGAAACATCTAGGGCAAGCCTCGTGTCTCATCTGAGAGAGGCTCTTCAAGAACAGGAATTCAAATTGGAGCAAGTCCGAAATCAACTTCAGGTTTGCGTTTCTGCTTCACATTGTCTTGGAAATCAAGTTGATGGCGGTCCTTCTCCAATCAATTCTTTTGCTTTCCTGTCATATGATATAGAGCTTTCAAGATTCCGAAGTTCCCTCAACCCTCTTTTTTTCTTGGTAGATAGTTTGTTGGGTGCTTACGAGTTGGAATTGCCTTTATGCAAAGACCAAGTTCTTTAA

Coding sequence (CDS)

ATGGGTGGTACGTTCAATCCACAAATTTTGGTAGAGAAGCTAGCCAGGCTGAACAACTCACAGGCGAGCATTGAGACTTTATCCCACTGGTGTATATTTCACATGAACAAAGCCAAGCAAGTTGTAGAAACATGGGATAAGCAGTTTCATTGTTCTCCACGTGAGCAGAGGTTGGCCTATCTGTACCTTGCAAATGACATTTTGCAGAACAGTAGGCGAAAAGGCTCAGAGTTTGTTGGTGAATTTTGGAAAGTCCTTCCTCATGCACTGCGTGATGTAATTGGGAGCGGGGACGAATTTGGAAGAAATGCTGCCCTACGACTGATTGGCATTTGGGAAGAGAGAAAAGTTTTTGGATCTCGAGGACAGAGTCTTAAAGAAGAGATAATGGGAAAGCATATGGAAACTGGTAATCGAAATGGGAAGCCATTCAGCAGTAAACTGAAACAATCTGCCAGTGTATCGTTGGATAAAATAGTTTCTGGTTACCAAGTTGTTTATGGAAATGAGATTGATGAAGATGCAGTATTGAGCAAATGCAGGAATTCTATTAGCTATCTCGAGAAACTGGACAAAGAAATTGGCGCTGATGTCAATTCAGGTATTTATACATTGTTGATGGGGCAATACCGTGGGTCTTCAATTGCAGATGATTTGCGGGGACATCATACCATTTTAAGGGACTGCATCGAACAATTAACAACAATTGAAACATCTAGGGCAAGCCTCGTGTCTCATCTGAGAGAGGCTCTTCAAGAACAGGAATTCAAATTGGAGCAAGTCCGAAATCAACTTCAGGTTTGCGTTTCTGCTTCACATTGTCTTGGAAATCAAGTTGATGGCGGTCCTTCTCCAATCAATTCTTTTGCTTTCCTGTCATATGATATAGAGCTTTCAAGATTCCGAAGTTCCCTCAACCCTCTTTTTTTCTTGGTAGATAGTTTGTTGGGTGCTTACGAGTTGGAATTGCCTTTATGCAAAGACCAAGTTCTTTAA

Protein sequence

MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGSRGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQVCVSASHCLGNQVDGGPSPINSFAFLSYDIELSRFRSSLNPLFFLVDSLLGAYELELPLCKDQVL

Homology

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BLAST of CaUC11G210950 vs. NCBI nr
Match: XP_008441251.1 (PREDICTED: UPF0400 protein C337.03 isoform X1 [Cucumis melo])

HSP 1 Score: 506.1 bits (1302), Expect = 2.2e-139
Identity = 255/272 (93.75%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIGADVNS       GQYRGSSIADDLRGHHTILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGADVNS-------GQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQ   S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQASHSQS 265

[Close]

BLAST of CaUC11G210950 vs. NCBI nr
Match: XP_038884747.1 (UPF0400 protein C337.03 [Benincasa hispida] >XP_038884750.1 UPF0400 protein C337.03 [Benincasa hispida])

HSP 1 Score: 504.6 bits (1298), Expect = 6.5e-139
Identity = 254/272 (93.38%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGKH+ETG+RNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKHLETGSRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIG DVNS       GQYRGSSIADDLRGHHTILRDCIEQLT+IETSR
Sbjct: 181 RNSISYLEKLDKEIGTDVNS-------GQYRGSSIADDLRGHHTILRDCIEQLTSIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQ   S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQASHSQS 265

[Close]

BLAST of CaUC11G210950 vs. NCBI nr
Match: XP_004138638.1 (UPF0400 protein C337.03 [Cucumis sativus] >XP_031737380.1 UPF0400 protein C337.03 [Cucumis sativus] >KGN63123.1 hypothetical protein Csa_021963 [Cucumis sativus])

HSP 1 Score: 502.3 bits (1292), Expect = 3.2e-138
Identity = 253/272 (93.01%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIG DVNS       GQYRGSSIADDLRGHH+ILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGNDVNS-------GQYRGSSIADDLRGHHSILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQ   S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQASHSQS 265

[Close]

BLAST of CaUC11G210950 vs. NCBI nr
Match: XP_023549865.1 (UPF0400 protein C337.03-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.9 bits (1252), Expect = 1.4e-133
Identity = 246/272 (90.44%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDDFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGK +ETGNRNGK FSSKLKQS S+SLDKIVSGYQVVY +E+DEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKSLETGNRNGKHFSSKLKQSGSISLDKIVSGYQVVYRSEVDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIGADVNS       GQYRGSS A+DLRGHH+ILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGADVNS-------GQYRGSSAAEDLRGHHSILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQV  S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQVSHSQS 265

[Close]

BLAST of CaUC11G210950 vs. NCBI nr
Match: XP_023549864.1 (UPF0400 protein C337.03-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.9 bits (1252), Expect = 1.4e-133
Identity = 246/272 (90.44%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDDFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGK +ETGNRNGK FSSKLKQS S+SLDKIVSGYQVVY +E+DEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKSLETGNRNGKHFSSKLKQSGSISLDKIVSGYQVVYRSEVDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIGADVNS       GQYRGSS A+DLRGHH+ILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGADVNS-------GQYRGSSAAEDLRGHHSILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQV  S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQVSHSQS 265

[Close]

BLAST of CaUC11G210950 vs. ExPASy Swiss-Prot
Match: Q9NQG5 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9606 GN=RPRD1B PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 49/116 (42.24%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 4   TFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYL 63
           +F+   L +KL+ L+NSQ S++TLS W I H   A  +V  W ++   +   ++L +LYL
Sbjct: 3   SFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYL 62

Query: 64  ANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFG 120
           AND++QNS+RKG EF  EF  VL  A   V    DE  +    RL+ IW+ER V+G
Sbjct: 63  ANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYG 118

[Close]

BLAST of CaUC11G210950 vs. ExPASy Swiss-Prot
Match: Q9CSU0 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=10090 GN=Rprd1b PE=1 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 49/116 (42.24%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 4   TFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYL 63
           +F+   L +KL+ L+NSQ S++TLS W I H   A  +V  W ++   +   ++L +LYL
Sbjct: 3   SFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYL 62

Query: 64  ANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFG 120
           AND++QNS+RKG EF  EF  VL  A   V    DE  +    RL+ IW+ER V+G
Sbjct: 63  ANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYG 118

[Close]

BLAST of CaUC11G210950 vs. ExPASy Swiss-Prot
Match: Q0P5J9 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=9913 GN=RPRD1A PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-21
Identity = 78/282 (27.66%), Postives = 133/282 (47.16%), Query Frame = 0


Query: 5   FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLA 64
           F+   L +KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   ++L +LYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 65  NDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGSRG-Q 124
           ND++QNS+RKG EF  +F  V+  A + V    DE  +    R++ IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 125 SLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDE 184
            LK+ + G                N N     S  +   ++ L + +   +    N    
Sbjct: 124 QLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLE----NAASG 183

Query: 185 DAVLSKCRNS-------ISYLEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHH 244
           DA + +   S       +S L+K+ DKE G  ++  +    +L+  Y G   A+      
Sbjct: 184 DAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAE------ 243

Query: 245 TILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL 266
                 I+    +    A  +   +EAL E+E KLE+ + +L
Sbjct: 244 ------IDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKL 269

[Close]

BLAST of CaUC11G210950 vs. ExPASy Swiss-Prot
Match: Q96P16 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9606 GN=RPRD1A PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-21
Identity = 78/282 (27.66%), Postives = 133/282 (47.16%), Query Frame = 0


Query: 5   FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLA 64
           F+   L +KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   ++L +LYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 65  NDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGSRG-Q 124
           ND++QNS+RKG EF  +F  V+  A + V    DE  +    R++ IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 125 SLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDE 184
            LK+ + G                N N     S  +   ++ L + +   +    N    
Sbjct: 124 QLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLE----NAASG 183

Query: 185 DAVLSKCRNS-------ISYLEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHH 244
           DA + +   S       +S L+K+ DKE G  ++  +    +L+  Y G   A+      
Sbjct: 184 DAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAE------ 243

Query: 245 TILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL 266
                 I+    +    A  +   +EAL E+E KLE+ + +L
Sbjct: 244 ------IDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKL 269

[Close]

BLAST of CaUC11G210950 vs. ExPASy Swiss-Prot
Match: Q5R8Y3 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9601 GN=RPRD1A PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-21
Identity = 78/282 (27.66%), Postives = 133/282 (47.16%), Query Frame = 0


Query: 5   FNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLA 64
           F+   L +KL+ L+NSQ S++TLS W I H   ++ +V  W+++   +   ++L +LYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 65  NDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGSRG-Q 124
           ND++QNS+RKG EF  +F  V+  A + V    DE  +    R++ IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 125 SLKEEIMGKHME----------TGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDE 184
            LK+ + G                N N     S  +   ++ L + +   +    N    
Sbjct: 124 QLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLE----NAASG 183

Query: 185 DAVLSKCRNS-------ISYLEKL-DKEIGADVNSGI--YTLLMGQYRGSSIADDLRGHH 244
           DA + +   S       +S L+K+ DKE G  ++  +    +L+  Y G   A+      
Sbjct: 184 DAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAE------ 243

Query: 245 TILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQL 266
                 I+    +    A  +   +EAL E+E KLE+ + +L
Sbjct: 244 ------IDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKL 269

[Close]

BLAST of CaUC11G210950 vs. ExPASy TrEMBL
Match: A0A1S3B3N2 (UPF0400 protein C337.03 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 1.1e-139
Identity = 255/272 (93.75%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIGADVNS       GQYRGSSIADDLRGHHTILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGADVNS-------GQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQ   S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQASHSQS 265

[Close]

BLAST of CaUC11G210950 vs. ExPASy TrEMBL
Match: A0A0A0LMU3 (CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404750 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.6e-138
Identity = 253/272 (93.01%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIG DVNS       GQYRGSSIADDLRGHH+ILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGNDVNS-------GQYRGSSIADDLRGHHSILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQ   S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQASHSQS 265

[Close]

BLAST of CaUC11G210950 vs. ExPASy TrEMBL
Match: A0A1S3B3S0 (UPF0400 protein C337.03 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.6e-133
Identity = 246/272 (90.44%), Postives = 250/272 (91.91%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVIG+GDEFGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIGNGDEFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGKH+ETGNRNGKPF+SKLKQSASVSLDKIVSGYQVVYG EIDEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKHLETGNRNGKPFNSKLKQSASVSLDKIVSGYQVVYGKEIDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIGADVNS                DDLRGHHTILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGADVNS----------------DDLRGHHTILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQ   S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQASHSQS 256

[Close]

BLAST of CaUC11G210950 vs. ExPASy TrEMBL
Match: A0A6J1FFD5 (UPF0400 protein C337.03-like OS=Cucurbita moschata OX=3662 GN=LOC111445219 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.3e-132
Identity = 244/272 (89.71%), Postives = 252/272 (92.65%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDDFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGK +ETGNRNGK FSSKLKQS S+SLDKIV GYQVVY +E+DEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKSLETGNRNGKHFSSKLKQSGSISLDKIVCGYQVVYRSEVDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIGADVNS       GQYRG+S A+DLRGHH ILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGADVNS-------GQYRGTSAAEDLRGHHHILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQV  S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQVSHSQS 265

[Close]

BLAST of CaUC11G210950 vs. ExPASy TrEMBL
Match: A0A6J1JZ86 (UPF0400 protein C337.03-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489207 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.7e-132
Identity = 245/272 (90.07%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MGGTFNPQILV+KLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCS REQRLAY
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSAREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRDVI  GD+FGRNAALRLIGIWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIEHGDDFGRNAALRLIGIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKC 180
           RGQSLKEEIMGK  ETGNRNGK FSSKLKQS S+SLDKIVSGYQVVY +E+DEDAVLSKC
Sbjct: 121 RGQSLKEEIMGKSSETGNRNGKHFSSKLKQSGSISLDKIVSGYQVVYRSEVDEDAVLSKC 180

Query: 181 RNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSR 240
           RNSISYLEKLDKEIGADVNS       GQYRGSS A+DLRGHH ILRDCIEQLTTIETSR
Sbjct: 181 RNSISYLEKLDKEIGADVNS-------GQYRGSSAAEDLRGHHNILRDCIEQLTTIETSR 240

Query: 241 ASLVSHLREALQEQEFKLEQVRNQLQVCVSAS 273
           ASLVSHLREALQEQEFKLEQVRNQLQV  S S
Sbjct: 241 ASLVSHLREALQEQEFKLEQVRNQLQVSHSQS 265

[Close]

BLAST of CaUC11G210950 vs. TAIR 10
Match: AT3G26990.1 (ENTH/VHS family protein )

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-98
Identity = 178/271 (65.68%), Postives = 212/271 (78.23%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           MG +FN QILVEKLA+LNNSQASIETLSHWCIFHMNKAK VVETW +QFHC+PREQRLAY
Sbjct: 1   MGSSFNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKHVVETWGRQFHCAPREQRLAY 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNSRRKGSEFVGEFWKVLP ALRD+I +GD+FGR +A RL+ IWEERKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDMIENGDDFGRKSARRLVNIWEERKVFGS 120

Query: 121 RGQSLKEEIMGKHMETGNRNGKPFSSKL----KQSASVSLDKIVSGYQVVYGNEIDEDAV 180
           RGQ LKEE++G+  E G RNG     KL    +Q    +L+K+VS  +V++G +IDEDA+
Sbjct: 121 RGQILKEELLGRQPENGTRNGNLVPLKLSVPQRQVNGSTLEKVVSAVEVLHGVQIDEDAL 180

Query: 181 LSKCRNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRDCIEQLTTI 240
           + K  N+  YLEK  +E+  D++S       G   G ++  +L+G H ILRDCIEQL  +
Sbjct: 181 VGKSTNAAGYLEKATQEVERDLSS-------GHAPGPAVVKELQGQHVILRDCIEQLGAM 240

Query: 241 ETSRASLVSHLREALQEQEFKLEQVRNQLQV 268
           ETSR SL+SHLREALQEQE KLEQVRN LQ+
Sbjct: 241 ETSRTSLISHLREALQEQELKLEQVRNHLQI 264

[Close]

BLAST of CaUC11G210950 vs. TAIR 10
Match: AT5G10060.1 (ENTH/VHS family protein )

HSP 1 Score: 241.5 bits (615), Expect = 9.6e-64
Identity = 123/281 (43.77%), Postives = 188/281 (66.90%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           M   F+ QIL++KLA+LN+SQ SIETLSHWCIF+ +KA+ +V TW+KQFH +  +Q++  
Sbjct: 1   MSSVFSDQILIDKLAKLNSSQQSIETLSHWCIFNRSKAELIVTTWEKQFHSTEMDQKVPL 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNS+R+G+EFV EFW VLP AL+D++  GD+ G++A  R+I IWEER+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWNVLPKALKDIVSQGDDNGKSAVARVIKIWEERRVFGS 120

Query: 121 RGQSLKEEIMGKHM--------------ETGNRNGKPFSSKLKQSASVSLDKIVSGYQVV 180
           R +SLK+ ++G+ +              ++  R  K   +KL  S  V+ +KI S Y +V
Sbjct: 121 RSKSLKDVMLGEDVPLPLDISKKRPRGSKSSKRESKSSRTKLASSGGVA-EKIASAYHLV 180

Query: 181 YGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTIL 240
                +E+A ++KC++++  + K++K    DV     T      R  S+A +L     +L
Sbjct: 181 VAENSNEEAEMNKCKSAVKRIRKMEK----DVEEACSTAKDNPKR-KSLAKELEEEEYLL 240

Query: 241 RDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV 268
           R CIE+L +++ SR+SLV+ L++AL+EQE +L+ ++ Q+QV
Sbjct: 241 RQCIEKLKSVQGSRSSLVNQLKDALREQESELDNLKAQIQV 275

[Close]

BLAST of CaUC11G210950 vs. TAIR 10
Match: AT5G65180.1 (ENTH/VHS family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-60
Identity = 121/279 (43.37%), Postives = 183/279 (65.59%), Query Frame = 0


Query: 1   MGGTFNPQILVEKLARLNNSQASIETLSHWCIFHMNKAKQVVETWDKQFHCSPREQRLAY 60
           M   F+ +IL++ LA+LN++Q SI+TLS WCI H ++A+ VV TW+KQFH +   Q++  
Sbjct: 1   MSSPFSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPL 60

Query: 61  LYLANDILQNSRRKGSEFVGEFWKVLPHALRDVIGSGDEFGRNAALRLIGIWEERKVFGS 120
           LYLANDILQNS+R+G+EFV EFWKVLP AL+D++  GD++G+    RL+ IWEER+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWKVLPGALKDIVSLGDDYGKGVVSRLVNIWEERRVFGS 120

Query: 121 RGQSLKEEIM----------GKHMETGNRNGK--PFSSKLKQSASVSLDKIVSGYQVVYG 180
           R +SLK+ ++           K    G+++ K    S+K K S+    +KIVS + +V  
Sbjct: 121 RSKSLKDVMLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRA 180

Query: 181 NEIDEDAVLSKCRNSISYLEKLDKEIGADVNSGIYTLLMGQYRGSSIADDLRGHHTILRD 240
              +E+  ++KC++++  + K++K    DV     T      R  S+A +L     ILR 
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEK----DVEDACST--AKDPRKESLAKELEEEENILRQ 240

Query: 241 CIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQLQV 268
            +E+L ++E SR SLV+HLREAL+EQE +LE +++Q+QV
Sbjct: 241 SVEKLKSVEESRTSLVNHLREALREQESELENLQSQIQV 273

[Close]

BLAST of CaUC11G210950 vs. TAIR 10
Match: AT5G65180.2 (ENTH/VHS family protein )

HSP 1 Score: 79.7 bits (195), Expect = 4.8e-15
Identity = 46/123 (37.40%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 145 SSKLKQSASVSLDKIVSGYQVVYGNEIDEDAVLSKCRNSISYLEKLDKEIGADVNSGIYT 204
           S+K K S+    +KIVS + +V     +E+  ++KC++++  + K++K    DV     T
Sbjct: 29  STKTKLSSGGVSEKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEK----DVEDACST 88

Query: 205 LLMGQYRGSSIADDLRGHHTILRDCIEQLTTIETSRASLVSHLREALQEQEFKLEQVRNQ 264
                 R  S+A +L     ILR  +E+L ++E SR SLV+HLREAL+EQE +LE +++Q
Sbjct: 89  --AKDPRKESLAKELEEEENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQ 145

Query: 265 LQV 268
           +QV
Sbjct: 149 IQV 145

The following BLAST results are available for this feature:

BLAST of CaUC11G210950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441251.1	2.2e-139	93.75	PREDICTED: UPF0400 protein C337.03 isoform X1 [Cucumis melo]	[more]
XP_038884747.1	6.5e-139	93.38	UPF0400 protein C337.03 [Benincasa hispida] >XP_038884750.1 UPF0400 protein C337...	[more]
XP_004138638.1	3.2e-138	93.01	UPF0400 protein C337.03 [Cucumis sativus] >XP_031737380.1 UPF0400 protein C337.0...	[more]
XP_023549865.1	1.4e-133	90.44	UPF0400 protein C337.03-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023549864.1	1.4e-133	90.44	UPF0400 protein C337.03-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC11G210950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NQG5	1.2e-21	42.24	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9...	[more]
Q9CSU0	1.2e-21	42.24	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=1...	[more]
Q0P5J9	1.5e-21	27.66	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=991...	[more]
Q96P16	1.5e-21	27.66	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9...	[more]
Q5R8Y3	1.5e-21	27.66	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9...	[more]

BLAST of CaUC11G210950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3N2	1.1e-139	93.75	UPF0400 protein C337.03 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 ...	[more]
A0A0A0LMU3	1.6e-138	93.01	CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404750 PE=4 SV...	[more]
A0A1S3B3S0	2.6e-133	90.44	UPF0400 protein C337.03 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485437 PE=4 ...	[more]
A0A6J1FFD5	1.3e-132	89.71	UPF0400 protein C337.03-like OS=Cucurbita moschata OX=3662 GN=LOC111445219 PE=4 ...	[more]
A0A6J1JZ86	1.7e-132	90.07	UPF0400 protein C337.03-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489...	[more]

BLAST of CaUC11G210950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26990.1	2.0e-98	65.68	ENTH/VHS family protein	[more]
AT5G10060.1	9.6e-64	43.77	ENTH/VHS family protein	[more]
AT5G65180.1	1.3e-60	43.37	ENTH/VHS family protein	[more]
AT5G65180.2	4.8e-15	37.40	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 244..264
None	No IPR available	PANTHER	PTHR12460:SF23	OS01G0925000 PROTEIN	coord: 1..270
None	No IPR available	PANTHER	PTHR12460	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	coord: 1..270
None	No IPR available	CDD	cd16981	CID_RPRD_like	coord: 7..130 e-value: 8.89793E-63 score: 193.566
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 9..130 e-value: 1.4E-46 score: 170.7
IPR006569	CID domain	PFAM	PF04818	CID	coord: 9..120 e-value: 1.7E-32 score: 112.2
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 2..134 score: 42.394745
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 2..131 e-value: 2.1E-36 score: 126.7
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 10..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G210950.1	CaUC11G210950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing
cellular_component	GO:0016591	RNA polymerase II, holoenzyme
molecular_function	GO:0000993	RNA polymerase II complex binding