CaUC11G209150 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G209150
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	photosystem I reaction center subunit IV, chloroplastic-like
Location	Ciama_Chr11: 13506288 .. 13510303 (-)
RNA-Seq Expression	CaUC11G209150
Synteny	CaUC11G209150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATAGTGTCTACATGGCAACATTCAATTGGTTGAAACTCAACATTCAACTTTTCCATAGGCTGAGAAAATTCCAGCAAGAATTATTACCCATAAAACAACTGATTCTTTCTCCTTCAATATGTGGTTATCATTATTTCATTGGTTTATCTCTTATTATTCAAACCCCCATCTTCCAAAGCATTAACACTCAATCTCTCAAAGCTGCTTTCATCAGTTAAGGCATAGAAGAGAGATTCAAAGACAAAAGGCAATGGCTACCTCTAACATTTCTTGCATTGCTTCTGGAGTGGTCATTCCCTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTCTCGCCTTCTTCCCCAAGAATTCCAACTCTGTTTCAAGATCATCTAGATTGGTTATCAGGGCTGCCGCCTCCGACGAGGCTGCTCCCCCACCTCCGGCTGCCGCTCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGTGAGACCTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAGTTCAAATCCAGATTAGGATTCCAACCTCTAATTTTTAACAAAATCTTGGCATTTATTTGAACAGGTGAAGATTCTAAGGAAAGAATCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGATCAGGTTGGACCCTTGAATTTTTATCTATTTATCATTTTTGTTTCTGGATGTGTGTGCAAATAGAAACTTTTTGGTTCTATTAATTTTTTCATATTCTCATTTTATAGTGAGATTTGACACTCACAAAGTCAAGTGGGCTAAGATTTATGAGGGGAACTAAGTCAAGCCTGCTCTGTTTTTGGATTGAGATTATCCAAATGTTATGAAATGGAAAATCAAACAATTTTAATGGTAAATTTTTTTATCGAGGTTGATAGTACAAATTCATGTTAGTTGAGCTATATTCATATTGATGACTAGTTAATAATAGCTTTAAAAATTTCATATTTTATTTTGCTTTTGAAGGTGAAAAATTGTAATTTATTAAACACAAATGAAGTTTATATTACGGTTGATTTTTTCTTTTTCTTTTTTTTTTTTTTTTTATTAAAAAAAAGTGAATGTATGTATACTCGTGCTTAATGCATAAATGATATTTTGCAGGACCCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA

mRNA sequence

ATGGATATATTAAGGCATAGAAGAGAGATTCAAAGACAAAAGGCAATGGCTACCTCTAACATTTCTTGCATTGCTTCTGGAGTGGTCATTCCCTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTCTCGCCTTCTTCCCCAAGAATTCCAACTCTGTTTCAAGATCATCTAGATTGGTTATCAGGGCTGCCGCCTCCGACGAGGCTGCTCCCCCACCTCCGGCTGCCGCTCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTCTAAGGAAAGAATCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGATCAGGACCCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA

Coding sequence (CDS)

ATGGATATATTAAGGCATAGAAGAGAGATTCAAAGACAAAAGGCAATGGCTACCTCTAACATTTCTTGCATTGCTTCTGGAGTGGTCATTCCCTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTCTCGCCTTCTTCCCCAAGAATTCCAACTCTGTTTCAAGATCATCTAGATTGGTTATCAGGGCTGCCGCCTCCGACGAGGCTGCTCCCCCACCTCCGGCTGCCGCTCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTCTAAGGAAAGAATCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGATCAGGACCCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA

Protein sequence

MDILRHRREIQRQKAMATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Homology

[Close]

BLAST of CaUC11G209150 vs. NCBI nr
Match: XP_008441802.1 (PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 3.9e-65
Identity = 142/145 (97.93%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 15  AMATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAP 74
           AMA SN+SCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAP
Sbjct: 2   AMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAP 61

Query: 75  PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV 134
           PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV
Sbjct: 62  PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV 121

Query: 135 VRFNKVNYASVSTNNYALDEIEEVA 160
           VRFNKVNYASVSTNNYALDEIEEVA
Sbjct: 122 VRFNKVNYASVSTNNYALDEIEEVA 146

[Close]

BLAST of CaUC11G209150 vs. NCBI nr
Match: XP_038889433.1 (photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64
Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 16  MATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 75
           MA SN+SCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPP
Sbjct: 1   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 60

Query: 76  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 135
           PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 136 RFNKVNYASVSTNNYALDEIEEVA 160
           RF+KVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFSKVNYASVSTNNYALDEIEEVA 144

[Close]

BLAST of CaUC11G209150 vs. NCBI nr
Match: KAE8651724.1 (hypothetical protein Csa_006032 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 9.9e-61
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 11  QRQKAMATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASD 70
           +R  AMA SN+SCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIR  ASD
Sbjct: 86  KRAMAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASD 145

Query: 71  EAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTR 130
           EAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTR
Sbjct: 146 EAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTR 205

Query: 131 YPVVVRFNKVNYASVSTNNYALDEIEEVA 160
           YPVVVRFNKVNYASVSTNNYALDEI+EVA
Sbjct: 206 YPVVVRFNKVNYASVSTNNYALDEIQEVA 232

[Close]

BLAST of CaUC11G209150 vs. NCBI nr
Match: XP_004152807.2 (photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 15  AMATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAP 74
           AMA SN+SCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIR  ASDEAAP
Sbjct: 2   AMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAP 61

Query: 75  PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV 134
           PP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV
Sbjct: 62  PPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV 121

Query: 135 VRFNKVNYASVSTNNYALDEIEEVA 160
           VRFNKVNYASVSTNNYALDEI+EVA
Sbjct: 122 VRFNKVNYASVSTNNYALDEIQEVA 144

[Close]

BLAST of CaUC11G209150 vs. NCBI nr
Match: KAA0061399.1 (photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa])

HSP 1 Score: 238.4 bits (607), Expect = 4.2e-59
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 28  VVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAE 87
           VVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 88  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 147
           EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 129

Query: 148 NNYALDEIEEVA 160
           NNYALDEIEEVA
Sbjct: 130 NNYALDEIEEVA 141

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BLAST of CaUC11G209150 vs. ExPASy Swiss-Prot
Match: Q41229 (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEB PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-33
Identity = 87/147 (59.18%), Postives = 110/147 (74.83%), Query Frame = 0


Query: 16  MATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRS-SRLVIRAAASDEAAP 75
           MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RAA  +EAAP
Sbjct: 1   MASSSMASAASGFMVATPNIATSNTAPRTSMLFFSSSKNNTTTNFPRLVVRAA--EEAAP 60

Query: 76  PPPAAAPAAATAEEP---KPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRY 135
           P   AA A A  E P     KP PIGPKRG KV++LRKESYWYK VGSVV VDQDPNTRY
Sbjct: 61  P---AATATAEGEAPPAKAAKPPPIGPKRGTKVRVLRKESYWYKGVGSVVAVDQDPNTRY 120

Query: 136 PVVVRFNKVNYASVSTNNYALDEIEEV 159
           PVVVRFNKVNYA+VSTNNYALDE+EEV
Sbjct: 121 PVVVRFNKVNYANVSTNNYALDEVEEV 142

[Close]

BLAST of CaUC11G209150 vs. ExPASy Swiss-Prot
Match: Q41228 (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEA PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.7e-32
Identity = 84/143 (58.74%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 16  MATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 75
           MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RAA  +EAAPP
Sbjct: 1   MASCNMASAASNFLVATPNVASNTNTSRTTMLFF-SSKNYGSTAPRLVVRAA--EEAAPP 60

Query: 76  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 135
             AA    A A     KP PIGPKRG KV+ILRKESYWYK  GSVV  DQDPNTRYPVVV
Sbjct: 61  AAAATAEPAEAPVKAAKPPPIGPKRGTKVRILRKESYWYKGTGSVVACDQDPNTRYPVVV 120

Query: 136 RFNKVNYASVSTNNYALDEIEEV 159
           RFNKVNYA+VSTNNYALDEIEEV
Sbjct: 121 RFNKVNYANVSTNNYALDEIEEV 140

[Close]

BLAST of CaUC11G209150 vs. ExPASy Swiss-Prot
Match: Q9S831 (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAE1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.5e-31
Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 29  VIPSS-TTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRA------AASDEAAPPPPAAAP 88
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 89  AAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVN 148
             ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV VDQDP TRYPVVVRF KVN
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVN 130

Query: 149 YASVSTNNYALDEIEEVA 160
           YA++STNNYALDE+EEVA
Sbjct: 131 YANISTNNYALDEVEEVA 142

[Close]

BLAST of CaUC11G209150 vs. ExPASy Swiss-Prot
Match: P12354 (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAE-1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30
Identity = 81/123 (65.85%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 37  SSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPI 96
           SS + RL      P  + S  RS+RLV+RAA  +EAA  P AA+P    A +   KP PI
Sbjct: 6   SSVAVRLGLTQVLPNKNFSSPRSTRLVVRAA--EEAAAAPAAASP-EGEAPKAAAKPPPI 65

Query: 97  GPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIE 156
           GPKRG+KV+I+RKESYWYK VGSVV VDQDP TRYPVVVRFNKVNYA+VSTNNYALDEI+
Sbjct: 66  GPKRGSKVRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQ 125

Query: 157 EVA 160
           EVA
Sbjct: 126 EVA 125

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BLAST of CaUC11G209150 vs. ExPASy Swiss-Prot
Match: P13194 (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAE PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 8.8e-28
Identity = 81/150 (54.00%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 16  MATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 75
           MA++N++   S  ++ +     ++    S ++F P N   +    +LV RA     AAP 
Sbjct: 1   MASTNMASATSRFMLAAGIPSGANGGVSSRVSFLPSNRLGL----KLVARAEEPTAAAPA 60

Query: 76  PPAAA------PAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNT 135
            PA A       A AT E  K KP P GPKRG KVKILR+ESYWY   GSVVTVDQDPNT
Sbjct: 61  EPAPAADEKPEAAVATKEPAKAKPPPRGPKRGTKVKILRRESYWYNGTGSVVTVDQDPNT 120

Query: 136 RYPVVVRFNKVNYASVSTNNYALDEIEEVA 160
           RYPVVVRF KVNYA VSTNNYALDEI+EVA
Sbjct: 121 RYPVVVRFAKVNYAGVSTNNYALDEIKEVA 146

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BLAST of CaUC11G209150 vs. ExPASy TrEMBL
Match: A0A1S3B3T3 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103485855 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.9e-65
Identity = 142/145 (97.93%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 15  AMATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAP 74
           AMA SN+SCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAP
Sbjct: 2   AMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAP 61

Query: 75  PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV 134
           PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV
Sbjct: 62  PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV 121

Query: 135 VRFNKVNYASVSTNNYALDEIEEVA 160
           VRFNKVNYASVSTNNYALDEIEEVA
Sbjct: 122 VRFNKVNYASVSTNNYALDEIEEVA 146

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BLAST of CaUC11G209150 vs. ExPASy TrEMBL
Match: A0A0A0LJQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.8e-61
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 11  QRQKAMATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASD 70
           +R  AMA SN+SCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIR  ASD
Sbjct: 74  KRAMAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASD 133

Query: 71  EAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTR 130
           EAAPPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTR
Sbjct: 134 EAAPPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTR 193

Query: 131 YPVVVRFNKVNYASVSTNNYALDEIEEVA 160
           YPVVVRFNKVNYASVSTNNYALDEI+EVA
Sbjct: 194 YPVVVRFNKVNYASVSTNNYALDEIQEVA 220

[Close]

BLAST of CaUC11G209150 vs. ExPASy TrEMBL
Match: A0A5A7V6V9 (Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00230 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 28  VVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAE 87
           VVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 88  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 147
           EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 129

Query: 148 NNYALDEIEEVA 160
           NNYALDEIEEVA
Sbjct: 130 NNYALDEIEEVA 141

[Close]

BLAST of CaUC11G209150 vs. ExPASy TrEMBL
Match: A0A6J1FC09 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444038 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.7e-54
Identity = 124/144 (86.11%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 16  MATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 75
           MA SN+SCIASGV+IPSSTTI SSSSR SS+AFFPKNS S+SRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSTTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 76  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 135
           P AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PAAAATADAPAEAPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 136 RFNKVNYASVSTNNYALDEIEEVA 160
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFNKVNYASVSTNNYALDEIEEVA 143

[Close]

BLAST of CaUC11G209150 vs. ExPASy TrEMBL
Match: A0A6J1HLT8 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465716 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.7e-53
Identity = 123/144 (85.42%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 16  MATSNISCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 75
           MA SN+SCIASGV+IPSS TI SSSSR SS+AFFPKNS S+SRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSPTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 76  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 135
           P AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PAAAATADAPAEVPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 136 RFNKVNYASVSTNNYALDEIEEVA 160
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFNKVNYASVSTNNYALDEIEEVA 143

[Close]

BLAST of CaUC11G209150 vs. TAIR 10
Match: AT4G28750.1 (Photosystem I reaction centre subunit IV / PsaE protein )

HSP 1 Score: 134.8 bits (338), Expect = 6.0e-32
Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 29  VIPSS-TTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRA------AASDEAAPPPPAAAP 88
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 89  AAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVN 148
             ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV VDQDP TRYPVVVRF KVN
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVN 130

Query: 149 YASVSTNNYALDEIEEVA 160
           YA++STNNYALDE+EEVA
Sbjct: 131 YANISTNNYALDEVEEVA 142

[Close]

BLAST of CaUC11G209150 vs. TAIR 10
Match: AT2G20260.1 (photosystem I subunit E-2 )

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-28
Identity = 81/144 (56.25%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 25  ASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSVSRSSRLVIRAA-------ASDEAAP 84
           A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS +++ 
Sbjct: 7   ATGFILTANVPAAIGGGSSKSTTIVSFLPMR----SFGSRLVVRAAEDTPPATASSDSSS 66

Query: 85  PPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV 144
              AAAPA   A   K KP PIGPKRG+KVKILRKESYWYK+VGSVV VDQDP TRYPVV
Sbjct: 67  TTAAAAPAKVPA--AKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQDPKTRYPVV 126

Query: 145 VRFNKVNYASVSTNNYALDEIEEV 159
           VRF KVNYA++STNNYALDE+EEV
Sbjct: 127 VRFAKVNYANISTNNYALDEVEEV 144

The following BLAST results are available for this feature:

BLAST of CaUC11G209150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441802.1	3.9e-65	97.93	PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis...	[more]
XP_038889433.1	4.3e-64	97.22	photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]	[more]
KAE8651724.1	9.9e-61	91.28	hypothetical protein Csa_006032 [Cucumis sativus]	[more]
XP_004152807.2	2.2e-60	93.10	photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]	[more]
KAA0061399.1	4.2e-59	99.24	photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 ...	[more]

BLAST of CaUC11G209150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41229	3.1e-33	59.18	Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestri...	[more]
Q41228	7.7e-32	58.74	Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestri...	[more]
Q9S831	8.5e-31	60.87	Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thalian...	[more]
P12354	1.5e-30	65.85	Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=...	[more]
P13194	8.8e-28	54.00	Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare OX=45...	[more]

BLAST of CaUC11G209150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3T3	1.9e-65	97.93	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A0A0LJQ1	4.8e-61	91.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1	[more]
A0A5A7V6V9	2.0e-59	99.24	Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1FC09	5.7e-54	86.11	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1HLT8	3.7e-53	85.42	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima...	[more]

BLAST of CaUC11G209150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28750.1	6.0e-32	60.87	Photosystem I reaction centre subunit IV / PsaE protein	[more]
AT2G20260.1	2.4e-28	56.25	photosystem I subunit E-2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PFAM	PF02427	PSI_PsaE	coord: 99..158 e-value: 1.3E-30 score: 104.9
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PANTHER	PTHR34549	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED	coord: 16..159
None	No IPR available	GENE3D	2.30.30.50		coord: 92..159 e-value: 1.6E-36 score: 125.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..101
None	No IPR available	PANTHER	PTHR34549:SF7	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A	coord: 16..159
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 98..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G209150.1	CaUC11G209150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I